| AddReference(void) const | CObject | inline |
| Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive) | CSerialObject | virtual |
| CanBeDeleted(void) const THROWS_NONE | CObject | inline |
| CanGetAccession_version(void) const | CGBSeq_Base | inline |
| CanGetAlt_seq(void) const | CGBSeq_Base | inline |
| CanGetComment(void) const | CGBSeq_Base | inline |
| CanGetComment_set(void) const | CGBSeq_Base | inline |
| CanGetContig(void) const | CGBSeq_Base | inline |
| CanGetCreate_date(void) const | CGBSeq_Base | inline |
| CanGetCreate_release(void) const | CGBSeq_Base | inline |
| CanGetDatabase_reference(void) const | CGBSeq_Base | inline |
| CanGetDefinition(void) const | CGBSeq_Base | inline |
| CanGetDivision(void) const | CGBSeq_Base | inline |
| CanGetEntry_version(void) const | CGBSeq_Base | inline |
| CanGetFeature_set(void) const | CGBSeq_Base | inline |
| CanGetFeature_table(void) const | CGBSeq_Base | inline |
| CanGetKeywords(void) const | CGBSeq_Base | inline |
| CanGetLength(void) const | CGBSeq_Base | inline |
| CanGetLocus(void) const | CGBSeq_Base | inline |
| CanGetMoltype(void) const | CGBSeq_Base | inline |
| CanGetOrganism(void) const | CGBSeq_Base | inline |
| CanGetOther_seqids(void) const | CGBSeq_Base | inline |
| CanGetPrimary(void) const | CGBSeq_Base | inline |
| CanGetPrimary_accession(void) const | CGBSeq_Base | inline |
| CanGetProject(void) const | CGBSeq_Base | inline |
| CanGetReferences(void) const | CGBSeq_Base | inline |
| CanGetSecondary_accessions(void) const | CGBSeq_Base | inline |
| CanGetSegment(void) const | CGBSeq_Base | inline |
| CanGetSequence(void) const | CGBSeq_Base | inline |
| CanGetSource(void) const | CGBSeq_Base | inline |
| CanGetSource_db(void) const | CGBSeq_Base | inline |
| CanGetStrandedness(void) const | CGBSeq_Base | inline |
| CanGetStruc_comments(void) const | CGBSeq_Base | inline |
| CanGetTaxonomy(void) const | CGBSeq_Base | inline |
| CanGetTopology(void) const | CGBSeq_Base | inline |
| CanGetUpdate_date(void) const | CGBSeq_Base | inline |
| CanGetUpdate_release(void) const | CGBSeq_Base | inline |
| CanGetXrefs(void) const | CGBSeq_Base | inline |
| CDebugDumpable(void) | CDebugDumpable | inline |
| CGBSeq(void) | CGBSeq | inline |
| CGBSeq(const CGBSeq &value) | CGBSeq | private |
| CGBSeq_Base(void) | CGBSeq_Base | |
| CGBSeq_Base(const CGBSeq_Base &) | CGBSeq_Base | private |
| CheckReferenceOverflow(TCount count) const | CObject | private |
| CObject(void) | CObject | |
| CObject(const CObject &src) | CObject | |
| CSerialObject(void) | CSerialObject | |
| DebugDump(CDebugDumpContext ddc, unsigned int depth) const | CSerialObject | virtual |
| DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const | CDebugDumpable | |
| DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const | CDebugDumpable | |
| DECLARE_INTERNAL_TYPE_INFO() | CGBSeq_Base | |
| DeleteThis(void) | CObject | protectedvirtual |
| DoDeleteThisObject(void) | CObject | virtual |
| DoNotDeleteThisObject(void) | CObject | virtual |
| DumpToConsole(void) const | CDebugDumpable | |
| E_memberIndex enum name | CGBSeq_Base | |
| EAllocFillMode enum name | CObject | |
| eAllocFillNone enum value | CObject | |
| eAllocFillPattern enum value | CObject | |
| eAllocFillZero enum value | CObject | |
| eCounterBitsCanBeDeleted | CObject | static |
| eCounterBitsInPlainHeap | CObject | static |
| eCounterBitsPlaceMask | CObject | static |
| eCounterStateMask | CObject | static |
| eCounterStep | CObject | static |
| eCounterValid | CObject | static |
| EnableDebugDump(bool on) | CDebugDumpable | static |
| Equals(const CSerialObject &object, ESerialRecursionMode how=eRecursive) const | CSerialObject | virtual |
| GetAccession_version(void) const | CGBSeq_Base | inline |
| GetAllocFillMode(void) | CObject | static |
| GetAlt_seq(void) const | CGBSeq_Base | inline |
| GetComment(void) const | CGBSeq_Base | inline |
| GetComment_set(void) const | CGBSeq_Base | inline |
| GetContig(void) const | CGBSeq_Base | inline |
| GetCreate_date(void) const | CGBSeq_Base | inline |
| GetCreate_release(void) const | CGBSeq_Base | inline |
| GetDatabase_reference(void) const | CGBSeq_Base | inline |
| GetDefinition(void) const | CGBSeq_Base | inline |
| GetDivision(void) const | CGBSeq_Base | inline |
| GetEntry_version(void) const | CGBSeq_Base | inline |
| GetFeature_set(void) const | CGBSeq_Base | inline |
| GetFeature_table(void) const | CGBSeq_Base | inline |
| GetKeywords(void) const | CGBSeq_Base | inline |
| GetLength(void) const | CGBSeq_Base | inline |
| GetLocus(void) const | CGBSeq_Base | inline |
| GetMoltype(void) const | CGBSeq_Base | inline |
| GetNamespaceName(void) const | CSerialObject | |
| GetNamespacePrefix(void) const | CSerialObject | |
| GetOrganism(void) const | CGBSeq_Base | inline |
| GetOther_seqids(void) const | CGBSeq_Base | inline |
| GetPrimary(void) const | CGBSeq_Base | inline |
| GetPrimary_accession(void) const | CGBSeq_Base | inline |
| GetProject(void) const | CGBSeq_Base | inline |
| GetReferences(void) const | CGBSeq_Base | inline |
| GetSecondary_accessions(void) const | CGBSeq_Base | inline |
| GetSegment(void) const | CGBSeq_Base | inline |
| GetSequence(void) const | CGBSeq_Base | inline |
| GetSource(void) const | CGBSeq_Base | inline |
| GetSource_db(void) const | CGBSeq_Base | inline |
| GetStrandedness(void) const | CGBSeq_Base | inline |
| GetStruc_comments(void) const | CGBSeq_Base | inline |
| GetTaxonomy(void) const | CGBSeq_Base | inline |
| GetThisTypeInfo(void) const =0 | CSerialObject | pure virtual |
| GetTopology(void) const | CGBSeq_Base | inline |
| GetUpdate_date(void) const | CGBSeq_Base | inline |
| GetUpdate_release(void) const | CGBSeq_Base | inline |
| GetXrefs(void) const | CGBSeq_Base | inline |
| HasNamespaceName(void) const | CSerialObject | |
| HasNamespacePrefix(void) const | CSerialObject | |
| InitCounter(void) | CObject | inlineprivate |
| InvalidObject(void) const | CObject | private |
| IsAllocatedInPool(void) const THROWS_NONE | CObject | inline |
| IsSetAccession_version(void) const | CGBSeq_Base | inline |
| IsSetAlt_seq(void) const | CGBSeq_Base | inline |
| IsSetComment(void) const | CGBSeq_Base | inline |
| IsSetComment_set(void) const | CGBSeq_Base | inline |
| IsSetContig(void) const | CGBSeq_Base | inline |
| IsSetCreate_date(void) const | CGBSeq_Base | inline |
| IsSetCreate_release(void) const | CGBSeq_Base | inline |
| IsSetDatabase_reference(void) const | CGBSeq_Base | inline |
| IsSetDefinition(void) const | CGBSeq_Base | inline |
| IsSetDivision(void) const | CGBSeq_Base | inline |
| IsSetEntry_version(void) const | CGBSeq_Base | inline |
| IsSetFeature_set(void) const | CGBSeq_Base | inline |
| IsSetFeature_table(void) const | CGBSeq_Base | inline |
| IsSetKeywords(void) const | CGBSeq_Base | inline |
| IsSetLength(void) const | CGBSeq_Base | inline |
| IsSetLocus(void) const | CGBSeq_Base | inline |
| IsSetMoltype(void) const | CGBSeq_Base | inline |
| IsSetOrganism(void) const | CGBSeq_Base | inline |
| IsSetOther_seqids(void) const | CGBSeq_Base | inline |
| IsSetPrimary(void) const | CGBSeq_Base | inline |
| IsSetPrimary_accession(void) const | CGBSeq_Base | inline |
| IsSetProject(void) const | CGBSeq_Base | inline |
| IsSetReferences(void) const | CGBSeq_Base | inline |
| IsSetSecondary_accessions(void) const | CGBSeq_Base | inline |
| IsSetSegment(void) const | CGBSeq_Base | inline |
| IsSetSequence(void) const | CGBSeq_Base | inline |
| IsSetSource(void) const | CGBSeq_Base | inline |
| IsSetSource_db(void) const | CGBSeq_Base | inline |
| IsSetStrandedness(void) const | CGBSeq_Base | inline |
| IsSetStruc_comments(void) const | CGBSeq_Base | inline |
| IsSetTaxonomy(void) const | CGBSeq_Base | inline |
| IsSetTopology(void) const | CGBSeq_Base | inline |
| IsSetUpdate_date(void) const | CGBSeq_Base | inline |
| IsSetUpdate_release(void) const | CGBSeq_Base | inline |
| IsSetXrefs(void) const | CGBSeq_Base | inline |
| m_Accession_version | CGBSeq_Base | private |
| m_Alt_seq | CGBSeq_Base | private |
| m_Comment | CGBSeq_Base | private |
| m_Comment_set | CGBSeq_Base | private |
| m_Contig | CGBSeq_Base | private |
| m_Counter | CObject | mutableprivate |
| m_Create_date | CGBSeq_Base | private |
| m_Create_release | CGBSeq_Base | private |
| m_Database_reference | CGBSeq_Base | private |
| m_Definition | CGBSeq_Base | private |
| m_Division | CGBSeq_Base | private |
| m_Entry_version | CGBSeq_Base | private |
| m_Feature_set | CGBSeq_Base | private |
| m_Feature_table | CGBSeq_Base | private |
| m_Keywords | CGBSeq_Base | private |
| m_Length | CGBSeq_Base | private |
| m_Locus | CGBSeq_Base | private |
| m_Moltype | CGBSeq_Base | private |
| m_Organism | CGBSeq_Base | private |
| m_Other_seqids | CGBSeq_Base | private |
| m_Primary | CGBSeq_Base | private |
| m_Primary_accession | CGBSeq_Base | private |
| m_Project | CGBSeq_Base | private |
| m_References | CGBSeq_Base | private |
| m_Secondary_accessions | CGBSeq_Base | private |
| m_Segment | CGBSeq_Base | private |
| m_Sequence | CGBSeq_Base | private |
| m_set_State | CGBSeq_Base | private |
| m_Source | CGBSeq_Base | private |
| m_Source_db | CGBSeq_Base | private |
| m_Strandedness | CGBSeq_Base | private |
| m_Struc_comments | CGBSeq_Base | private |
| m_Taxonomy | CGBSeq_Base | private |
| m_Topology | CGBSeq_Base | private |
| m_Update_date | CGBSeq_Base | private |
| m_Update_release | CGBSeq_Base | private |
| m_Xrefs | CGBSeq_Base | private |
| ms_UnassignedByte | CSerialObject | static |
| ms_UnassignedStr | CSerialObject | static |
| ObjectStateCanBeDeleted(TCount count) | CObject | inlineprivatestatic |
| ObjectStateIsAllocatedInPool(TCount count) | CObject | inlineprivatestatic |
| ObjectStateReferenced(TCount count) | CObject | inlineprivatestatic |
| ObjectStateReferencedOnlyOnce(TCount count) | CObject | inlineprivatestatic |
| ObjectStateUnreferenced(TCount count) | CObject | inlineprivatestatic |
| ObjectStateValid(TCount count) | CObject | inlineprivatestatic |
| operator delete(void *ptr) | CObject | |
| operator delete(void *ptr, void *place) | CObject | |
| operator delete(void *ptr, CObjectMemoryPool *place) | CObject | |
| operator delete[](void *ptr) | CObject | |
| operator new(size_t size) | CObject | |
| operator new(size_t size, void *place) | CObject | |
| operator new(size_t size, CObjectMemoryPool *place) | CObject | |
| operator new[](size_t size) | CObject | |
| operator=(const CGBSeq &value) | CGBSeq | private |
| CSerialObject::operator=(const CObject &src) THROWS_NONE | CObject | inline |
| Referenced(void) const THROWS_NONE | CObject | inline |
| ReferencedOnlyOnce(void) const THROWS_NONE | CObject | inline |
| ReleaseReference(void) const | CObject | |
| RemoveLastReference(TCount count) const | CObject | private |
| RemoveReference(void) const | CObject | inline |
| Reset(void) | CGBSeq_Base | virtual |
| ResetAccession_version(void) | CGBSeq_Base | |
| ResetAlt_seq(void) | CGBSeq_Base | |
| ResetComment(void) | CGBSeq_Base | |
| ResetComment_set(void) | CGBSeq_Base | |
| ResetContig(void) | CGBSeq_Base | |
| ResetCreate_date(void) | CGBSeq_Base | |
| ResetCreate_release(void) | CGBSeq_Base | |
| ResetDatabase_reference(void) | CGBSeq_Base | |
| ResetDefinition(void) | CGBSeq_Base | |
| ResetDivision(void) | CGBSeq_Base | |
| ResetEntry_version(void) | CGBSeq_Base | |
| ResetFeature_set(void) | CGBSeq_Base | |
| ResetFeature_table(void) | CGBSeq_Base | |
| ResetKeywords(void) | CGBSeq_Base | |
| ResetLength(void) | CGBSeq_Base | inline |
| ResetLocus(void) | CGBSeq_Base | |
| ResetMoltype(void) | CGBSeq_Base | |
| ResetOrganism(void) | CGBSeq_Base | |
| ResetOther_seqids(void) | CGBSeq_Base | |
| ResetPrimary(void) | CGBSeq_Base | |
| ResetPrimary_accession(void) | CGBSeq_Base | |
| ResetProject(void) | CGBSeq_Base | |
| ResetReferences(void) | CGBSeq_Base | |
| ResetSecondary_accessions(void) | CGBSeq_Base | |
| ResetSegment(void) | CGBSeq_Base | |
| ResetSequence(void) | CGBSeq_Base | |
| ResetSource(void) | CGBSeq_Base | |
| ResetSource_db(void) | CGBSeq_Base | |
| ResetStrandedness(void) | CGBSeq_Base | |
| ResetStruc_comments(void) | CGBSeq_Base | |
| ResetTaxonomy(void) | CGBSeq_Base | |
| ResetTopology(void) | CGBSeq_Base | |
| ResetUpdate_date(void) | CGBSeq_Base | |
| ResetUpdate_release(void) | CGBSeq_Base | |
| ResetXrefs(void) | CGBSeq_Base | |
| SetAccession_version(const TAccession_version &value) | CGBSeq_Base | inline |
| SetAccession_version(TAccession_version &&value) | CGBSeq_Base | inline |
| SetAccession_version(void) | CGBSeq_Base | inline |
| SetAllocFillMode(EAllocFillMode mode) | CObject | static |
| SetAllocFillMode(const string &value) | CObject | static |
| SetAlt_seq(void) | CGBSeq_Base | inline |
| SetComment(const TComment &value) | CGBSeq_Base | inline |
| SetComment(TComment &&value) | CGBSeq_Base | inline |
| SetComment(void) | CGBSeq_Base | inline |
| SetComment_set(void) | CGBSeq_Base | inline |
| SetContig(const TContig &value) | CGBSeq_Base | inline |
| SetContig(TContig &&value) | CGBSeq_Base | inline |
| SetContig(void) | CGBSeq_Base | inline |
| SetCreate_date(const TCreate_date &value) | CGBSeq_Base | inline |
| SetCreate_date(TCreate_date &&value) | CGBSeq_Base | inline |
| SetCreate_date(void) | CGBSeq_Base | inline |
| SetCreate_release(const TCreate_release &value) | CGBSeq_Base | inline |
| SetCreate_release(TCreate_release &&value) | CGBSeq_Base | inline |
| SetCreate_release(void) | CGBSeq_Base | inline |
| SetDatabase_reference(const TDatabase_reference &value) | CGBSeq_Base | inline |
| SetDatabase_reference(TDatabase_reference &&value) | CGBSeq_Base | inline |
| SetDatabase_reference(void) | CGBSeq_Base | inline |
| SetDefinition(const TDefinition &value) | CGBSeq_Base | inline |
| SetDefinition(TDefinition &&value) | CGBSeq_Base | inline |
| SetDefinition(void) | CGBSeq_Base | inline |
| SetDivision(const TDivision &value) | CGBSeq_Base | inline |
| SetDivision(TDivision &&value) | CGBSeq_Base | inline |
| SetDivision(void) | CGBSeq_Base | inline |
| SetEntry_version(const TEntry_version &value) | CGBSeq_Base | inline |
| SetEntry_version(TEntry_version &&value) | CGBSeq_Base | inline |
| SetEntry_version(void) | CGBSeq_Base | inline |
| SetFeature_set(void) | CGBSeq_Base | inline |
| SetFeature_table(void) | CGBSeq_Base | inline |
| SetKeywords(void) | CGBSeq_Base | inline |
| SetLength(TLength value) | CGBSeq_Base | inline |
| SetLength(void) | CGBSeq_Base | inline |
| SetLocus(const TLocus &value) | CGBSeq_Base | inline |
| SetLocus(TLocus &&value) | CGBSeq_Base | inline |
| SetLocus(void) | CGBSeq_Base | inline |
| SetMoltype(const TMoltype &value) | CGBSeq_Base | inline |
| SetMoltype(TMoltype &&value) | CGBSeq_Base | inline |
| SetMoltype(void) | CGBSeq_Base | inline |
| SetOrganism(const TOrganism &value) | CGBSeq_Base | inline |
| SetOrganism(TOrganism &&value) | CGBSeq_Base | inline |
| SetOrganism(void) | CGBSeq_Base | inline |
| SetOther_seqids(void) | CGBSeq_Base | inline |
| SetPrimary(const TPrimary &value) | CGBSeq_Base | inline |
| SetPrimary(TPrimary &&value) | CGBSeq_Base | inline |
| SetPrimary(void) | CGBSeq_Base | inline |
| SetPrimary_accession(const TPrimary_accession &value) | CGBSeq_Base | inline |
| SetPrimary_accession(TPrimary_accession &&value) | CGBSeq_Base | inline |
| SetPrimary_accession(void) | CGBSeq_Base | inline |
| SetProject(const TProject &value) | CGBSeq_Base | inline |
| SetProject(TProject &&value) | CGBSeq_Base | inline |
| SetProject(void) | CGBSeq_Base | inline |
| SetReferences(void) | CGBSeq_Base | inline |
| SetSecondary_accessions(void) | CGBSeq_Base | inline |
| SetSegment(const TSegment &value) | CGBSeq_Base | inline |
| SetSegment(TSegment &&value) | CGBSeq_Base | inline |
| SetSegment(void) | CGBSeq_Base | inline |
| SetSequence(const TSequence &value) | CGBSeq_Base | inline |
| SetSequence(TSequence &&value) | CGBSeq_Base | inline |
| SetSequence(void) | CGBSeq_Base | inline |
| SetSource(const TSource &value) | CGBSeq_Base | inline |
| SetSource(TSource &&value) | CGBSeq_Base | inline |
| SetSource(void) | CGBSeq_Base | inline |
| SetSource_db(const TSource_db &value) | CGBSeq_Base | inline |
| SetSource_db(TSource_db &&value) | CGBSeq_Base | inline |
| SetSource_db(void) | CGBSeq_Base | inline |
| SetStrandedness(const TStrandedness &value) | CGBSeq_Base | inline |
| SetStrandedness(TStrandedness &&value) | CGBSeq_Base | inline |
| SetStrandedness(void) | CGBSeq_Base | inline |
| SetStruc_comments(void) | CGBSeq_Base | inline |
| SetTaxonomy(const TTaxonomy &value) | CGBSeq_Base | inline |
| SetTaxonomy(TTaxonomy &&value) | CGBSeq_Base | inline |
| SetTaxonomy(void) | CGBSeq_Base | inline |
| SetTopology(const TTopology &value) | CGBSeq_Base | inline |
| SetTopology(TTopology &&value) | CGBSeq_Base | inline |
| SetTopology(void) | CGBSeq_Base | inline |
| SetUpdate_date(const TUpdate_date &value) | CGBSeq_Base | inline |
| SetUpdate_date(TUpdate_date &&value) | CGBSeq_Base | inline |
| SetUpdate_date(void) | CGBSeq_Base | inline |
| SetUpdate_release(const TUpdate_release &value) | CGBSeq_Base | inline |
| SetUpdate_release(TUpdate_release &&value) | CGBSeq_Base | inline |
| SetUpdate_release(void) | CGBSeq_Base | inline |
| SetVerifyDataGlobal(ESerialVerifyData verify) | CSerialObject | static |
| SetVerifyDataThread(ESerialVerifyData verify) | CSerialObject | static |
| SetXrefs(void) | CGBSeq_Base | inline |
| sm_DumpEnabled | CDebugDumpable | privatestatic |
| TAccession_version typedef | CGBSeq_Base | |
| TAlt_seq typedef | CGBSeq_Base | |
| TComment typedef | CGBSeq_Base | |
| TComment_set typedef | CGBSeq_Base | |
| TContig typedef | CGBSeq_Base | |
| TCount typedef | CObject | |
| TCounter typedef | CObject | |
| TCreate_date typedef | CGBSeq_Base | |
| TCreate_release typedef | CGBSeq_Base | |
| TDatabase_reference typedef | CGBSeq_Base | |
| TDefinition typedef | CGBSeq_Base | |
| TDivision typedef | CGBSeq_Base | |
| TEntry_version typedef | CGBSeq_Base | |
| TFeature_set typedef | CGBSeq_Base | |
| TFeature_table typedef | CGBSeq_Base | |
| ThrowNullPointerException(void) | CObject | static |
| ThrowNullPointerException(const type_info &type) | CObject | static |
| ThrowUnassigned(TMemberIndex index) const | CSerialObject | |
| ThrowUnassigned(TMemberIndex index, const char *file_name, int file_line) const | CSerialObject | |
| TKeywords typedef | CGBSeq_Base | |
| TLength typedef | CGBSeq_Base | |
| TLockerType typedef | CObject | |
| TLocus typedef | CGBSeq_Base | |
| TmemberIndex typedef | CGBSeq_Base | |
| TMoltype typedef | CGBSeq_Base | |
| TOrganism typedef | CGBSeq_Base | |
| TOther_seqids typedef | CGBSeq_Base | |
| Tparent typedef | CGBSeq | private |
| TPrimary typedef | CGBSeq_Base | |
| TPrimary_accession typedef | CGBSeq_Base | |
| TProject typedef | CGBSeq_Base | |
| TReferences typedef | CGBSeq_Base | |
| TSecondary_accessions typedef | CGBSeq_Base | |
| TSegment typedef | CGBSeq_Base | |
| TSequence typedef | CGBSeq_Base | |
| TSource typedef | CGBSeq_Base | |
| TSource_db typedef | CGBSeq_Base | |
| TStrandedness typedef | CGBSeq_Base | |
| TStruc_comments typedef | CGBSeq_Base | |
| TTaxonomy typedef | CGBSeq_Base | |
| TTopology typedef | CGBSeq_Base | |
| TUpdate_date typedef | CGBSeq_Base | |
| TUpdate_release typedef | CGBSeq_Base | |
| TXrefs typedef | CGBSeq_Base | |
| UnassignedByte(void) | CSerialObject | inlinestatic |
| UnassignedString(void) | CSerialObject | inlinestatic |
| UnassignedStringUTF8(void) | CSerialObject | inlinestatic |
| x_GetVerifyData(void) | CSerialObject | privatestatic |
| ~CDebugDumpable(void) | CDebugDumpable | virtual |
| ~CGBSeq(void) | CGBSeq | |
| ~CGBSeq_Base(void) | CGBSeq_Base | virtual |
| ~CObject(void) | CObject | virtual |
| ~CSerialObject(void) | CSerialObject | virtual |
