| AddReference(void) const | CObject | inline |
| Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive) | CSerialObject | virtual |
| CanBeDeleted(void) const THROWS_NONE | CObject | inline |
| CanGetClass(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetDesc(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetId(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetMols(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetOther_sequences(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetStats(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetUnplaced_stats(void) const | CGC_AssemblyUnit_Base | inline |
| CanGetUnplaced_unlocalized_stats(void) const | CGC_AssemblyUnit_Base | inline |
| CDebugDumpable(void) | CDebugDumpable | inline |
| CGC_AssemblyUnit_Base(void) | CGC_AssemblyUnit_Base | |
| CGC_AssemblyUnit_Base(const CGC_AssemblyUnit_Base &) | CGC_AssemblyUnit_Base | private |
| CheckReferenceOverflow(TCount count) const | CObject | private |
| CObject(void) | CObject | |
| CObject(const CObject &src) | CObject | |
| CSerialObject(void) | CSerialObject | |
| DebugDump(CDebugDumpContext ddc, unsigned int depth) const | CSerialObject | virtual |
| DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const | CDebugDumpable | |
| DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const | CDebugDumpable | |
| DECLARE_INTERNAL_TYPE_INFO() | CGC_AssemblyUnit_Base | |
| DeleteThis(void) | CObject | protectedvirtual |
| DoDeleteThisObject(void) | CObject | virtual |
| DoNotDeleteThisObject(void) | CObject | virtual |
| DumpToConsole(void) const | CDebugDumpable | |
| E_memberIndex enum name | CGC_AssemblyUnit_Base | |
| EAllocFillMode enum name | CObject | |
| eAllocFillNone enum value | CObject | |
| eAllocFillPattern enum value | CObject | |
| eAllocFillZero enum value | CObject | |
| EClass enum name | CGC_AssemblyUnit_Base | |
| EClass(void) | CGC_AssemblyUnit_Base | static |
| eClass_alt_loci enum value | CGC_AssemblyUnit_Base | |
| eClass_assembly_patch enum value | CGC_AssemblyUnit_Base | |
| eClass_haploid_unit enum value | CGC_AssemblyUnit_Base | |
| eClass_other enum value | CGC_AssemblyUnit_Base | |
| eCounterBitsCanBeDeleted | CObject | static |
| eCounterBitsInPlainHeap | CObject | static |
| eCounterBitsPlaceMask | CObject | static |
| eCounterStateMask | CObject | static |
| eCounterStep | CObject | static |
| eCounterValid | CObject | static |
| EnableDebugDump(bool on) | CDebugDumpable | static |
| Equals(const CSerialObject &object, ESerialRecursionMode how=eRecursive) const | CSerialObject | virtual |
| GetAllocFillMode(void) | CObject | static |
| GetClass(void) const | CGC_AssemblyUnit_Base | inline |
| GetDesc(void) const | CGC_AssemblyUnit_Base | inline |
| GetId(void) const | CGC_AssemblyUnit_Base | inline |
| GetMols(void) const | CGC_AssemblyUnit_Base | inline |
| GetNamespaceName(void) const | CSerialObject | |
| GetNamespacePrefix(void) const | CSerialObject | |
| GetOther_sequences(void) const | CGC_AssemblyUnit_Base | inline |
| GetStats(void) const | CGC_AssemblyUnit_Base | inline |
| GetThisTypeInfo(void) const =0 | CSerialObject | pure virtual |
| GetUnplaced_stats(void) const | CGC_AssemblyUnit_Base | inline |
| GetUnplaced_unlocalized_stats(void) const | CGC_AssemblyUnit_Base | inline |
| HasNamespaceName(void) const | CSerialObject | |
| HasNamespacePrefix(void) const | CSerialObject | |
| InitCounter(void) | CObject | inlineprivate |
| InvalidObject(void) const | CObject | private |
| IsAllocatedInPool(void) const THROWS_NONE | CObject | inline |
| IsSetClass(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetDesc(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetId(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetMols(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetOther_sequences(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetStats(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetUnplaced_stats(void) const | CGC_AssemblyUnit_Base | inline |
| IsSetUnplaced_unlocalized_stats(void) const | CGC_AssemblyUnit_Base | inline |
| m_Class | CGC_AssemblyUnit_Base | private |
| m_Counter | CObject | mutableprivate |
| m_Desc | CGC_AssemblyUnit_Base | private |
| m_Id | CGC_AssemblyUnit_Base | private |
| m_Mols | CGC_AssemblyUnit_Base | private |
| m_Other_sequences | CGC_AssemblyUnit_Base | private |
| m_set_State | CGC_AssemblyUnit_Base | private |
| m_Stats | CGC_AssemblyUnit_Base | private |
| m_Unplaced_stats | CGC_AssemblyUnit_Base | private |
| m_Unplaced_unlocalized_stats | CGC_AssemblyUnit_Base | private |
| ms_UnassignedByte | CSerialObject | static |
| ms_UnassignedStr | CSerialObject | static |
| ObjectStateCanBeDeleted(TCount count) | CObject | inlineprivatestatic |
| ObjectStateIsAllocatedInPool(TCount count) | CObject | inlineprivatestatic |
| ObjectStateReferenced(TCount count) | CObject | inlineprivatestatic |
| ObjectStateReferencedOnlyOnce(TCount count) | CObject | inlineprivatestatic |
| ObjectStateUnreferenced(TCount count) | CObject | inlineprivatestatic |
| ObjectStateValid(TCount count) | CObject | inlineprivatestatic |
| operator delete(void *ptr) | CObject | |
| operator delete(void *ptr, void *place) | CObject | |
| operator delete(void *ptr, CObjectMemoryPool *place) | CObject | |
| operator delete[](void *ptr) | CObject | |
| operator new(size_t size) | CObject | |
| operator new(size_t size, void *place) | CObject | |
| operator new(size_t size, CObjectMemoryPool *place) | CObject | |
| operator new[](size_t size) | CObject | |
| operator=(const CGC_AssemblyUnit_Base &) | CGC_AssemblyUnit_Base | private |
| CSerialObject::operator=(const CObject &src) THROWS_NONE | CObject | inline |
| Referenced(void) const THROWS_NONE | CObject | inline |
| ReferencedOnlyOnce(void) const THROWS_NONE | CObject | inline |
| ReleaseReference(void) const | CObject | |
| RemoveLastReference(TCount count) const | CObject | private |
| RemoveReference(void) const | CObject | inline |
| Reset(void) | CGC_AssemblyUnit_Base | virtual |
| ResetClass(void) | CGC_AssemblyUnit_Base | inline |
| ResetDesc(void) | CGC_AssemblyUnit_Base | |
| ResetId(void) | CGC_AssemblyUnit_Base | |
| ResetMols(void) | CGC_AssemblyUnit_Base | |
| ResetOther_sequences(void) | CGC_AssemblyUnit_Base | |
| ResetStats(void) | CGC_AssemblyUnit_Base | |
| ResetUnplaced_stats(void) | CGC_AssemblyUnit_Base | |
| ResetUnplaced_unlocalized_stats(void) | CGC_AssemblyUnit_Base | |
| SetAllocFillMode(EAllocFillMode mode) | CObject | static |
| SetAllocFillMode(const string &value) | CObject | static |
| SetClass(TClass value) | CGC_AssemblyUnit_Base | inline |
| SetClass(void) | CGC_AssemblyUnit_Base | inline |
| SetDesc(TDesc &value) | CGC_AssemblyUnit_Base | |
| SetDesc(void) | CGC_AssemblyUnit_Base | inline |
| SetId(void) | CGC_AssemblyUnit_Base | inline |
| SetMols(void) | CGC_AssemblyUnit_Base | inline |
| SetOther_sequences(void) | CGC_AssemblyUnit_Base | inline |
| SetStats(TStats &value) | CGC_AssemblyUnit_Base | |
| SetStats(void) | CGC_AssemblyUnit_Base | |
| SetUnplaced_stats(void) | CGC_AssemblyUnit_Base | inline |
| SetUnplaced_unlocalized_stats(void) | CGC_AssemblyUnit_Base | inline |
| SetVerifyDataGlobal(ESerialVerifyData verify) | CSerialObject | static |
| SetVerifyDataThread(ESerialVerifyData verify) | CSerialObject | static |
| sm_DumpEnabled | CDebugDumpable | privatestatic |
| TClass typedef | CGC_AssemblyUnit_Base | |
| TCount typedef | CObject | |
| TCounter typedef | CObject | |
| TDesc typedef | CGC_AssemblyUnit_Base | |
| ThrowNullPointerException(void) | CObject | static |
| ThrowNullPointerException(const type_info &type) | CObject | static |
| ThrowUnassigned(TMemberIndex index) const | CSerialObject | |
| ThrowUnassigned(TMemberIndex index, const char *file_name, int file_line) const | CSerialObject | |
| TId typedef | CGC_AssemblyUnit_Base | |
| TLockerType typedef | CObject | |
| TmemberIndex typedef | CGC_AssemblyUnit_Base | |
| TMols typedef | CGC_AssemblyUnit_Base | |
| TOther_sequences typedef | CGC_AssemblyUnit_Base | |
| Tparent typedef | CGC_AssemblyUnit_Base | private |
| TStats typedef | CGC_AssemblyUnit_Base | |
| TUnplaced_stats typedef | CGC_AssemblyUnit_Base | |
| TUnplaced_unlocalized_stats typedef | CGC_AssemblyUnit_Base | |
| UnassignedByte(void) | CSerialObject | inlinestatic |
| UnassignedString(void) | CSerialObject | inlinestatic |
| UnassignedStringUTF8(void) | CSerialObject | inlinestatic |
| x_GetVerifyData(void) | CSerialObject | privatestatic |
| ~CDebugDumpable(void) | CDebugDumpable | virtual |
| ~CGC_AssemblyUnit_Base(void) | CGC_AssemblyUnit_Base | virtual |
| ~CObject(void) | CObject | virtual |
| ~CSerialObject(void) | CSerialObject | virtual |
