CGtfAttributes Class Reference

Search Toolkit Book for CGtfAttributes

#include <objtools/readers/gtf_reader.hpp>

Collaboration diagram for CGtfAttributes:

Public Types
using	MultiValue = set< string >
using	MultiAttributes = map< string, MultiValue >

Public Member Functions
const MultiAttributes &	Get () const
string	ValueOf (const string &key) const
bool	HasValue (const string &key, const string &value="") const
void	GetValues (const string &key, MultiValue &values) const
void	AddValue (const string &key, const string &value)
void	Remove (const string &key)
void	RemoveValue (const string &key, const string &value)

Protected Attributes
MultiAttributes	mAttributes

Friends
CGtfAttributes	g_GetIntersection (const CGtfAttributes &x, const CGtfAttributes &y)

Detailed Description

Definition at line 51 of file gtf_reader.hpp.

Member Typedef Documentation

MultiAttributes

using CGtfAttributes::MultiAttributes = map<string, MultiValue>

Definition at line 58 of file gtf_reader.hpp.

MultiValue

using CGtfAttributes::MultiValue = set<string>

Definition at line 56 of file gtf_reader.hpp.

Member Function Documentation

AddValue()

void CGtfAttributes::AddValue ( const string &  key, const string &  value  )

inline

Definition at line 113 of file gtf_reader.hpp.

References map_checker< Container >::end(), map_checker< Container >::find(), map_checker< Container >::insert(), ncbi::grid::netcache::search::fields::key, mAttributes, and rapidjson::value.

Referenced by CGtfReadRecord::xAssignAttributesFromGff().

Get()

const MultiAttributes& CGtfAttributes::Get ( void  ) const

inline

Definition at line 61 of file gtf_reader.hpp.

References mAttributes.

Referenced by g_GetIntersection(), and CGtfReader::xFeatureSetQualifiers().

GetValues()

void CGtfAttributes::GetValues ( const string &  key, MultiValue &  values  ) const

inline

Definition at line 99 of file gtf_reader.hpp.

References set< Key, Compare >::clear(), map_checker< Container >::end(), map_checker< Container >::find(), ncbi::grid::netcache::search::fields::key, and mAttributes.

Referenced by ValueOf(), and CGtfReader::xPropagateQualToParent().

HasValue()

bool CGtfAttributes::HasValue ( const string &  key, const string &  value = ""  ) const

inline

Definition at line 79 of file gtf_reader.hpp.

References map_checker< Container >::end(), map_checker< Container >::find(), ncbi::grid::netcache::search::fields::key, mAttributes, and rapidjson::value.

Referenced by CGtfReader::xFeatureTrimQualifiers().

Remove()

void CGtfAttributes::Remove ( const string &  key )

inline

Definition at line 125 of file gtf_reader.hpp.

References map_checker< Container >::end(), map_checker< Container >::erase(), map_checker< Container >::find(), ncbi::grid::netcache::search::fields::key, and mAttributes.

RemoveValue()

void CGtfAttributes::RemoveValue ( const string &  key, const string &  value  )

inline

Definition at line 135 of file gtf_reader.hpp.

References map_checker< Container >::end(), map_checker< Container >::erase(), map_checker< Container >::find(), ncbi::grid::netcache::search::fields::key, mAttributes, and rapidjson::value.

ValueOf()

string CGtfAttributes::ValueOf ( const string &  key ) const

inline

Definition at line 67 of file gtf_reader.hpp.

References set< Key, Compare >::begin(), GetValues(), ncbi::grid::netcache::search::fields::key, and set< Key, Compare >::size().

Referenced by CGtfLocationRecord::CGtfLocationRecord(), CGtfReadRecord::FeatureKey(), CGtfReadRecord::GeneKey(), CGtfReadRecord::TranscriptId(), and CGtfReader::xFeatureSetDataMrna().

Friends And Related Function Documentation

g_GetIntersection

CGtfAttributes g_GetIntersection ( const CGtfAttributes &  x, const CGtfAttributes &  y  )

friend

Definition at line 230 of file gtf_reader.cpp.

Member Data Documentation

mAttributes

MultiAttributes CGtfAttributes::mAttributes

protected

Definition at line 153 of file gtf_reader.hpp.

Referenced by AddValue(), Get(), GetValues(), HasValue(), Remove(), and RemoveValue().

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The documentation for this class was generated from the following file:

• include/objtools/readers/gtf_reader.hpp