Search Toolkit Book for CMacroFunction_ApplyRNA
#include <gui/objutils/macro_fn_feature.hpp>
Inheritance diagram for CMacroFunction_ApplyRNA:
Collaboration diagram for CMacroFunction_ApplyRNA:
Public Member Functions | |
| CMacroFunction_ApplyRNA (EScopeEnum func_scope) | |
| virtual void | TheFunction () |
| ApplyRNA(type, rna_name, location(object), add_redundant(bool) [,qualifier_name][,qualifier_value]) qualifier_name should be specified by its asn path, relative to the Seq-feat Type of RNA can be one of: preRNA, mRNA, tRNA, rRNA, ncRNA, tmRNA, miscRNA. More... | |
| Public Member Functions inherited from IEditMacroFunction | |
| virtual | ~IEditMacroFunction () |
| Virtual destructor. More... | |
| virtual void | operator() (CMacroCmdComposite &cmd_composite, CIRef< IMacroBioDataIter > &data, CQueryParseTree::TNode &qnode) override |
| Function operator. More... | |
| bool | SetQualStringValue (CObjectInfo &oi, const string &value) |
| Functions make the action and collect statistics. More... | |
| bool | HasDataChanged () const |
| const CRef< IFunctionLog > & | GetFunctionLog () const |
| Public Member Functions inherited from IMacroFunction< CIRef< IMacroBioDataIter > > | |
| IMacroFunction (EScopeEnum func_scope) | |
| Constructor. More... | |
| virtual | ~IMacroFunction () |
| Virtual destructor. More... | |
| EScopeEnum | GetFuncScope () |
| ENestedFunc | GetNestedState () |
| const string & | GetFuncReport () const |
| Function extracts statistic from the object. More... | |
| const string & | GetErrorReport () const |
| void | SetNestedState (ENestedFunc type) |
Static Public Member Functions | |
| static CTempString | GetFuncName () |
Protected Member Functions | |
| virtual bool | x_ValidArguments () const |
| Tests the number and the type of function arguments. More... | |
| Protected Member Functions inherited from CMacroFunction_ApplyFeature | |
| bool | x_SetLocation (size_t index) |
| bool | x_ShouldAddRedundant (size_t index) |
| class CMacroFunction_ApplyFeature Generates different types of apply feature commands More... | |
| void | x_SetAdditionalFields (size_t index) |
| CMacroFunction_ApplyFeature (EScopeEnum func_scope) | |
| Protected Member Functions inherited from IEditMacroFunction | |
| IEditMacroFunction (EScopeEnum func_scope) | |
| virtual void | x_InitCall (CIRef< IMacroBioDataIter > &data) override |
| virtual void | x_SetUserObjects (CQueryParseTree::TNode &qnode) override |
| Extracts the function arguments and initializes m_Result member. More... | |
| virtual void | x_ResetState () |
| Reset the state of member variables that are set directly/indirectly from function arguments. More... | |
| virtual bool | x_IsNestedFunctionReturnValid () const |
| void | x_AssignReturnValue (const CObjectInfo &oi, const string &field_name) |
| Assigns value to m_Result. It is mostly useful for functions used in the WHERE clause. More... | |
| void | x_AssignReturnValueFromContainer (const CObjectInfo &oi, const string &container, const string &field_name) |
| void | x_GetObjectsFromRef (CMQueryNodeValue::TObs &objects, const size_t &index) |
| void | x_GetOptionalArgs (string &delimiter, bool &remove_field, size_t &index) |
| void | x_LogChangedQuals (const CRef< IFunctionLog > &log) |
| Protected Member Functions inherited from IMacroFunction< CIRef< IMacroBioDataIter > > | |
| void | x_LogFunction (CNcbiOstrstream &logstr) |
| void | x_LogError (CNcbiOstrstream &logstr) |
Additional Inherited Members | |
| Public Types inherited from IEditMacroFunction | |
| using | TParent = IMacroFunction< CIRef< IMacroBioDataIter > > |
| using | TNodeValuesVec = vector< CRef< CMQueryNodeValue > > |
| Public Types inherited from IMacroFunction< CIRef< IMacroBioDataIter > > | |
| enum | EScopeEnum |
| enum | ENestedFunc |
| Protected Attributes inherited from CMacroFunction_ApplyFeature | |
| objects::CBioseq_Handle | m_Bsh |
| CRef< objects::CSeq_feat > | m_NewFeat |
| CRef< objects::CSeq_loc > | m_Location |
| Protected Attributes inherited from IEditMacroFunction | |
| CIRef< IMacroBioDataIter > | m_DataIter |
| TNodeValuesVec | m_Args |
| CRef< CMQueryNodeValue > | m_Result |
| Int4 | m_QualsChangedCount |
| Number of changed qualifiers during the function call. More... | |
| string | m_FuncName |
| Name of the function as it's been used in the script. More... | |
| CRef< IFunctionLog > | m_FuncLog |
| Protected Attributes inherited from IMacroFunction< CIRef< IMacroBioDataIter > > | |
| CRef< CMacroCmdComposite > | m_CmdComposite |
| string | m_Report |
| function activity report More... | |
| string | m_Error |
| error report More... | |
| ENestedFunc | m_Nested |
| flag indicating whether the function is nested within another function More... | |
Detailed Description
Definition at line 434 of file macro_fn_feature.hpp.
The documentation for this class was generated from the following files:
- include/gui/objutils/macro_fn_feature.hpp
- src/gui/objutils/macro_fn_feature.cpp
