Search Toolkit Book for CNetBLASTUIDataSource
CNetBLASTUIDataSource. More...
#include <gui/packages/pkg_alignment/net_blast_ui_data_source.hpp>
Inheritance diagram for CNetBLASTUIDataSource:
Collaboration diagram for CNetBLASTUIDataSource:
Public Types | |
| typedef vector< CRef< CNetBlastJobDescriptor > > | TJobDescrVec |
| typedef map< int, string > | TTaxIdLabelMap |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Public Types inherited from CEventHandler | |
| enum | EDispatch { eDispatch_SelfOnly , eDispatch_AllHandlers , eDispatch_FirstHandler , eDispatch_Default = eDispatch_AllHandlers } |
| enum controlling dispatching strategies More... | |
| enum | EPoolName { ePool_Default = 0 , ePool_Parent , ePool_Child , ePool_Sibling , ePool_NextAvailable } |
| Identifiers for standard pools. More... | |
| typedef vector< CEventHandler * > | TListeners |
| typedef map< int, TListeners > | TPools |
| typedef list< AutoPtr< SPostRequest > > | TPostRequests |
| typedef std::map< CEventHandler *, int > | THandlerToCount |
| typedef void(* | FOnPostCallback) () |
| Public Types inherited from IObjectCmdContributor | |
| typedef pair< wxMenu *, wxEvtHandler * > | TContribution |
| Public Types inherited from IExplorerItemCmdContributor | |
| typedef pair< wxMenu *, wxEvtHandler * > | TContribution |
| Contribution consists of a Menu object and event handler. More... | |
Public Member Functions | |
| CNetBLASTUIDataSource (CNetBLASTUIDataSourceType &type) | |
| virtual | ~CNetBLASTUIDataSource () |
IExtension implementation | |
| virtual string | GetExtensionIdentifier () const |
| returns the unique human-readable identifier for the extension the id should use lowercase letters separated by underscores - "like_this" More... | |
| virtual string | GetExtensionLabel () const |
| returns a displayable label for this extension ( please capitalize the key words - "My Extension" ) More... | |
IServiceLocatorConsumer implementation | |
| virtual void | SetServiceLocator (IServiceLocator *locator) |
IRegSettings interface implementation | |
| virtual void | SetRegistryPath (const string &path) |
| virtual void | SaveSettings () const |
| virtual void | LoadSettings () |
IUIDataSource interface implementation | |
| virtual IUIDataSourceType & | GetType () const |
| virtual const IUIObject & | GetDescr () |
| returns UI description of the object (label, icon etc.) More... | |
| virtual bool | IsOpen () |
| a Data source needs to be open before use and closed after. More... | |
| virtual bool | Open () |
| Prepares Data Source for use, any initialization that can be potentially time-consuming or may require error handling shall be done in this function, not in a constructor. More... | |
| virtual bool | Close () |
| virtual void | EditProperties () |
| virtual IUIToolManager * | GetLoadManager () |
| virtual int | GetDefaultCommand () |
| virtual wxEvtHandler * | CreateEvtHandler () |
IObjectCmdContributor implementation | |
| virtual IObjectCmdContributor::TContribution | GetMenu (TConstScopedObjects &objects) |
| returns a menu with commands applicable to the objects and optional command handler for the commands caller assumes ownership of the returned objects More... | |
IExplorerItemCmdContributor implementation | |
| virtual IExplorerItemCmdContributor::TContribution | GetMenu (wxTreeCtrl &treeCtrl, PT::TItems &items) |
| for the given set of items returns a contribution More... | |
Interface for accessing Net BLAST services and objects | |
| CRef< CNetBlastJobDescriptor > | CreateJobDescriptor (const CBLASTParams ¶ms) |
| CRef< CNetBlastJobDescriptor > | CreateJobDescriptor (const string &rid) |
| void | GetJobDescriptors (TJobDescrVec &descriptors) |
| returns Job Descriptors not marked as Deleted More... | |
| CRef< CNetBlastJobDescriptor > | FindJobDescriptor (const string &rid) |
| void | StartRetrievingTask (TJobDescrVec &descriptors) |
| void | StartMonitoringTask (TJobDescrVec &descriptors) |
| void | DeleteJobDescriptors (TJobDescrVec &descriptors) |
| void | OnExplore () |
| void | OnLoadRIDs () |
| Public Member Functions inherited from CObjectEx | |
| CObjectEx (void) | |
| virtual | ~CObjectEx (void) |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
| Public Member Functions inherited from CWeakObject | |
| CWeakObject (void) | |
| virtual | ~CWeakObject (void) |
| CPtrToObjectProxy * | GetPtrProxy (void) const |
| Get pointer to proxy object containing pointer to this object. More... | |
| Public Member Functions inherited from CEventHandler | |
| CEventHandler () | |
| CEventHandler. More... | |
| virtual | ~CEventHandler () |
| virtual void | AddListener (CEventHandler *listener, int pool_name=ePool_Default) |
| Add a listener. More... | |
| virtual void | RemoveListener (CEventHandler *listener) |
| Remove a listener. More... | |
| virtual void | RemoveAllListeners (void) |
| virtual bool | HasListener (CEventHandler *listener, int pool_name=ePool_Default) const |
| returns "true" if the given listener belongs to the specified pool More... | |
| virtual const TListeners * | GetListeners (int pool_name=ePool_Default) const |
| returns a set of listeners fro the specified pool More... | |
| virtual bool | OnEvent (CEvent *evt) |
| Processes en event. Returns "true" if event has been processed. More... | |
| virtual bool | Dispatch (CEvent *evt, EDispatch disp_how=eDispatch_Default, int pool_name=ePool_Default) |
| Dispatches an event to the listeners (but does not handle it). More... | |
| virtual bool | Send (CEvent *evt, EDispatch disp_how=eDispatch_Default, int pool_name=ePool_Default) |
| Sends an event synchronously. More... | |
| virtual bool | Send (CEvent *evt, int pool_name) |
| void | Post (CRef< CEvent > evt, EDispatch disp_how=eDispatch_Default, int pool_name=ePool_Default) |
| Handles an event asynchronously (process and/or dispatch). More... | |
| Public Member Functions inherited from IExtension | |
| virtual | ~IExtension () |
| Public Member Functions inherited from IServiceLocatorConsumer | |
| virtual | ~IServiceLocatorConsumer () |
| Public Member Functions inherited from IUIDataSource | |
| virtual | ~IUIDataSource () |
| Public Member Functions inherited from IObjectCmdContributor | |
| virtual | ~IObjectCmdContributor () |
| Public Member Functions inherited from IExplorerItemCmdContributor | |
| virtual | ~IExplorerItemCmdContributor () |
| Public Member Functions inherited from IRegSettings | |
| virtual | ~IRegSettings () |
Protected Types | |
| typedef list< CConstRef< objects::CUser_field > > | TUserFields |
Protected Member Functions | |
| void | x_SaveJobDescriptors () |
| void | x_LoadJobDescriptors () |
| void | x_OnJobDescrChanged (CNetBlastJobDescriptor &descr) |
| callback - invoked by CNetBlastJobDescriptor More... | |
| void | x_StartTask (CBlastSearchTask &task) |
| void | x_AutoStartMonitoring () |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
| Protected Member Functions inherited from CWeakObject | |
| void | CleanWeakRefs (void) const |
| Method cleaning all CWeakRefs referencing at this moment to the object After calling to this method all existing CWeakRefs referencing to the object will return NULL, so it effectively will be equal to deleting the object. More... | |
| Protected Member Functions inherited from CEventHandler | |
| virtual const SEvtMap * | GetEventMap () const |
| void | x_DeclareDead () |
| Removes itself unavailable for async event delivery. More... | |
| void | x_AddListenerToPool (CEventHandler *listener, int pool_name) |
Protected Attributes | |
| CUIObject | m_Descr |
| CRef< CNetBLASTUIDataSourceType > | m_Type |
| IServiceLocator * | m_SrvLocator |
| string | m_RegPath |
| bool | m_Open |
| TJobDescrVec | m_JobDescrs |
| CFastMutex | m_JobDescrMutex |
| Protected Attributes inherited from CEventHandler | |
| TPools | m_Pools |
Friends | |
| class | CNetBlastJobDescriptor |
| class | CNetBlastDSEvtHandler |
Additional Inherited Members | |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Member Functions inherited from CEventHandler | |
| static bool | HandlePostRequest () |
| static void | ClearPostQueue () |
| erases all events from the queue More... | |
| static void | DestroyPostQueue () |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Static Protected Attributes inherited from CEventHandler | |
| static const SEvtMap | sm_EvtMap |
Detailed Description
Definition at line 95 of file net_blast_ui_data_source.hpp.
The documentation for this class was generated from the following files:
- include/gui/packages/pkg_alignment/net_blast_ui_data_source.hpp
- src/gui/packages/pkg_alignment/net_blast_ui_data_source.cpp
