AddReference(void) const | CObject | inline |
AsFastaString(ostream &s) const | CPDB_seq_id | |
Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive) | CSerialObject | virtual |
CanBeDeleted(void) const THROWS_NONE | CObject | inline |
CanGetChain(void) const | CPDB_seq_id_Base | inline |
CanGetChain_id(void) const | CPDB_seq_id_Base | inline |
CanGetMol(void) const | CPDB_seq_id_Base | inline |
CanGetRel(void) const | CPDB_seq_id_Base | inline |
CDebugDumpable(void) | CDebugDumpable | inline |
CheckReferenceOverflow(TCount count) const | CObject | private |
CObject(void) | CObject | |
CObject(const CObject &src) | CObject | |
Compare(const CPDB_seq_id &psip2) const | CPDB_seq_id | |
CPDB_seq_id(void) | CPDB_seq_id | inline |
CPDB_seq_id(const CPDB_seq_id &) | CPDB_seq_id | private |
CPDB_seq_id_Base(void) | CPDB_seq_id_Base | |
CPDB_seq_id_Base(const CPDB_seq_id_Base &) | CPDB_seq_id_Base | private |
CSerialObject(void) | CSerialObject | |
DebugDump(CDebugDumpContext ddc, unsigned int depth) const | CSerialObject | virtual |
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DECLARE_INTERNAL_TYPE_INFO() | CPDB_seq_id_Base | |
DeleteThis(void) | CObject | protectedvirtual |
DoDeleteThisObject(void) | CObject | virtual |
DoNotDeleteThisObject(void) | CObject | virtual |
DumpToConsole(void) const | CDebugDumpable | |
E_memberIndex enum name | CPDB_seq_id_Base | |
EAllocFillMode enum name | CObject | |
eAllocFillNone enum value | CObject | |
eAllocFillPattern enum value | CObject | |
eAllocFillZero enum value | CObject | |
eBothUnset_Chain enum value | CPDB_seq_id | |
eBothUnset_ChainId enum value | CPDB_seq_id | |
EBothUnsetPriority enum name | CPDB_seq_id | |
EConflictMode enum name | CPDB_seq_id | |
eConflictMode_default enum value | CPDB_seq_id | |
eConflictMode_legacy enum value | CPDB_seq_id | |
eCounterBitsCanBeDeleted | CObject | static |
eCounterBitsInPlainHeap | CObject | static |
eCounterBitsPlaceMask | CObject | static |
eCounterStateMask | CObject | static |
eCounterStep | CObject | static |
eCounterValid | CObject | static |
EnableDebugDump(bool on) | CDebugDumpable | static |
Equals(const CSerialObject &object, ESerialRecursionMode how=eRecursive) const | CSerialObject | virtual |
GetAllocFillMode(void) | CObject | static |
GetChain(void) const | CPDB_seq_id_Base | inline |
GetChain_id(void) const | CPDB_seq_id_Base | inline |
GetEffectiveChain_id(EBothUnsetPriority bothUnsetPriority=eBothUnset_ChainId) const | CPDB_seq_id | |
GetMol(void) const | CPDB_seq_id_Base | inline |
GetNamespaceName(void) const | CSerialObject | |
GetNamespacePrefix(void) const | CSerialObject | |
GetRel(void) const | CPDB_seq_id_Base | inline |
GetThisTypeInfo(void) const =0 | CSerialObject | pure virtual |
HasNamespaceName(void) const | CSerialObject | |
HasNamespacePrefix(void) const | CSerialObject | |
InitCounter(void) | CObject | inlineprivate |
InvalidObject(void) const | CObject | private |
IsAllocatedInPool(void) const THROWS_NONE | CObject | inline |
IsChainConflict(EConflictMode encodingMode=eConflictMode_default) const | CPDB_seq_id | |
IsSetChain(void) const | CPDB_seq_id_Base | inline |
IsSetChain_id(void) const | CPDB_seq_id_Base | inline |
IsSetMol(void) const | CPDB_seq_id_Base | inline |
IsSetRel(void) const | CPDB_seq_id_Base | inline |
m_Chain | CPDB_seq_id_Base | private |
m_Chain_id | CPDB_seq_id_Base | private |
m_Counter | CObject | mutableprivate |
m_Mol | CPDB_seq_id_Base | private |
m_Rel | CPDB_seq_id_Base | private |
m_set_State | CPDB_seq_id_Base | private |
Match(const CPDB_seq_id &psip2) const | CPDB_seq_id | |
ms_UnassignedByte | CSerialObject | static |
ms_UnassignedStr | CSerialObject | static |
ObjectStateCanBeDeleted(TCount count) | CObject | inlineprivatestatic |
ObjectStateIsAllocatedInPool(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferencedOnlyOnce(TCount count) | CObject | inlineprivatestatic |
ObjectStateUnreferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateValid(TCount count) | CObject | inlineprivatestatic |
operator delete(void *ptr) | CObject | |
operator delete(void *ptr, void *place) | CObject | |
operator delete(void *ptr, CObjectMemoryPool *place) | CObject | |
operator delete[](void *ptr) | CObject | |
operator new(size_t size) | CObject | |
operator new(size_t size, void *place) | CObject | |
operator new(size_t size, CObjectMemoryPool *place) | CObject | |
operator new[](size_t size) | CObject | |
operator=(const CPDB_seq_id &) | CPDB_seq_id | private |
CSerialObject::operator=(const CObject &src) THROWS_NONE | CObject | inline |
Referenced(void) const THROWS_NONE | CObject | inline |
ReferencedOnlyOnce(void) const THROWS_NONE | CObject | inline |
ReleaseReference(void) const | CObject | |
RemoveLastReference(TCount count) const | CObject | private |
RemoveReference(void) const | CObject | inline |
Reset(void) | CPDB_seq_id_Base | virtual |
ResetChain(void) | CPDB_seq_id_Base | inline |
ResetChain_id(void) | CPDB_seq_id_Base | |
ResetChainIdentifiers(void) | CPDB_seq_id | |
ResetMol(void) | CPDB_seq_id_Base | |
ResetRel(void) | CPDB_seq_id_Base | |
SetAllocFillMode(EAllocFillMode mode) | CObject | static |
SetAllocFillMode(const string &value) | CObject | static |
SetChain(TChain value) | CPDB_seq_id_Base | inline |
SetChain(void) | CPDB_seq_id_Base | inline |
SetChain_id(const TChain_id &value) | CPDB_seq_id_Base | inline |
SetChain_id(TChain_id &&value) | CPDB_seq_id_Base | inline |
SetChain_id(void) | CPDB_seq_id_Base | inline |
SetChainIdentifiers(TChain chainIdentifier) | CPDB_seq_id | |
SetChainIdentifiers(const TChain_id &chainIdentifier) | CPDB_seq_id | |
SetDefaultChain(void) | CPDB_seq_id_Base | inline |
SetMol(const TMol &value) | CPDB_seq_id_Base | inline |
SetMol(void) | CPDB_seq_id_Base | inline |
SetRel(TRel &value) | CPDB_seq_id_Base | |
SetRel(void) | CPDB_seq_id_Base | |
SetVerifyDataGlobal(ESerialVerifyData verify) | CSerialObject | static |
SetVerifyDataThread(ESerialVerifyData verify) | CSerialObject | static |
sm_DumpEnabled | CDebugDumpable | privatestatic |
TChain typedef | CPDB_seq_id_Base | |
TChain_id typedef | CPDB_seq_id_Base | |
TCount typedef | CObject | |
TCounter typedef | CObject | |
ThrowNullPointerException(void) | CObject | static |
ThrowNullPointerException(const type_info &type) | CObject | static |
ThrowUnassigned(TMemberIndex index) const | CSerialObject | |
ThrowUnassigned(TMemberIndex index, const char *file_name, int file_line) const | CSerialObject | |
TLockerType typedef | CObject | |
TmemberIndex typedef | CPDB_seq_id_Base | |
TMol typedef | CPDB_seq_id_Base | |
Tparent typedef | CPDB_seq_id | private |
TRel typedef | CPDB_seq_id_Base | |
UnassignedByte(void) | CSerialObject | inlinestatic |
UnassignedString(void) | CSerialObject | inlinestatic |
UnassignedStringUTF8(void) | CSerialObject | inlinestatic |
x_GetVerifyData(void) | CSerialObject | privatestatic |
~CDebugDumpable(void) | CDebugDumpable | virtual |
~CObject(void) | CObject | virtual |
~CPDB_seq_id(void) | CPDB_seq_id | |
~CPDB_seq_id_Base(void) | CPDB_seq_id_Base | virtual |
~CSerialObject(void) | CSerialObject | virtual |