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CRemapClient Class Reference

Client for ASN.1-based protocol defined in file remap.asn

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@remap_client.hpp User-defined methods of the data storage class. More...

#include <objects/remap/remap_client.hpp>

+ Inheritance diagram for CRemapClient:
+ Collaboration diagram for CRemapClient:

Public Member Functions

 CRemapClient (const string &url=kDefaultUrl)
 
 ~CRemapClient (void)
 
CRef< objects::CSeq_loc > Remap (const objects::CSeq_loc &loc, const string &from_build, const string &to_build)
 Remap a single Seq-loc. More...
 
void Remap (const vector< CRef< objects::CSeq_loc > > &locs, const string &from_build, const string &to_build, vector< CRef< objects::CSeq_loc > > &result)
 Remap multiple Seq-locs. More...
 
- Public Member Functions inherited from CRemapClient_Base
 CRemapClient_Base (void)
 
virtual ~CRemapClient_Base (void)
 
virtual void Ask (const TRequest &request, TReply &reply)
 
virtual void Ask (const TRequest &request, TReply &reply, TReplyChoice::E_Choice wanted)
 
virtual const TRequestGetDefaultRequest (void) const
 
virtual TRequestSetDefaultRequest (void)
 
virtual void SetDefaultRequest (const TRequest &request)
 
virtual void Ask (const TRequestChoice &req, TReply &reply)
 
virtual void Ask (const TRequestChoice &req, TReply &reply, TReplyChoice::E_Choice wanted)
 
virtual CRef< CRemap_resultAskRemap (const CRemap_query &req, TReply *reply=0)
 
virtual list< stringAskMaps_to_builds (const string &req, TReply *reply=0)
 
virtual list< stringAskMaps_from_builds (const string &req, TReply *reply=0)
 
virtual list< stringAskAll_builds (TReply *reply=0)
 
- Public Member Functions inherited from CRPCClient< CRemap_request, CRemap_reply >
 CRPCClient (const string &service=kEmptyStr)
 
 CRPCClient (const string &service, ESerialDataFormat format)
 
 CRPCClient (const string &service, ESerialDataFormat format, unsigned int try_limit)
 
virtual ~CRPCClient (void)
 
virtual void WriteRequest (CObjectOStream &out, const CRemap_request &request)
 
virtual void ReadReply (CObjectIStream &in, CRemap_reply &reply)
 
EIO_Status SetTimeout (const STimeout *timeout, EIO_Event direction=eIO_ReadWrite)
 
const STimeoutGetTimeout (EIO_Event direction=eIO_Read) const
 
EIO_Status AsyncConnect (void *handle_buf, size_t handle_size)
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 
- Public Member Functions inherited from CRPCClient_Base
 CRPCClient_Base (const string &service, ESerialDataFormat format)
 
 CRPCClient_Base (const string &service, ESerialDataFormat format, unsigned int try_limit)
 
virtual ~CRPCClient_Base (void)
 
void Connect (void)
 
void Disconnect (void)
 
void Reset (void)
 
void SetArgs (const string &args)
 Set additional connection arguments. More...
 
void SetArgs (const CUrlArgs &args)
 
const stringGetArgs (void) const
 Get additional connection arguments. More...
 
const stringGetService (void) const
 
void SetService (const string &service)
 
ESerialDataFormat GetFormat (void) const
 
void SetFormat (ESerialDataFormat fmt)
 
unsigned int GetTryLimit (void) const
 Get number of request attempts. More...
 
void SetTryLimit (unsigned int n)
 
unsigned int GetRetryLimit (void) const
 
void SetRetryLimit (unsigned int n)
 
const CTimeSpan GetRetryDelay (void) const
 Get retry delay. More...
 
void SetRetryDelay (const CTimeSpan &ts)
 
void SetCanceledCallback (const ICanceled *canceled)
 Set request canceler. More...
 
bool IsCanceled (void) const
 

Static Public Attributes

static const char * kDefaultUrl = "http://intrawebdev8/staff/jcherry/remap/remap_server.cgi"
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 

Protected Member Functions

void x_Connect ()
 These run with m_Mutex already acquired. More...
 
- Protected Member Functions inherited from CRPCClient< CRemap_request, CRemap_reply >
virtual string GetAffinity (const CRemap_request &) const
 
virtual void x_WriteRequest (CObjectOStream &out, const CSerialObject &request) override
 
virtual void x_ReadReply (CObjectIStream &in, CSerialObject &reply) override
 
virtual string x_GetAffinity (const CSerialObject &request) const override
 
void x_ConnectURL (const string &url)
 Connect to a URL. More...
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 
- Protected Member Functions inherited from CRPCClient_Base
void SetAffinity (const string &affinity)
 
virtual void x_Disconnect (void)
 Disconnect as cleanly as possible. More...
 
void x_SetStream (CNcbiIostream *stream)
 
void x_Ask (const CSerialObject &request, CSerialObject &reply)
 
virtual bool x_ShouldRetry (unsigned int tries)
 
CTimeSpan x_GetRetryDelay (double max_delay) const
 
- Protected Member Functions inherited from CConnIniter
 CConnIniter (void)
 

Private Types

typedef CRemapClient_Base Tparent
 

Private Member Functions

 CRemapClient (const CRemapClient &value)
 
CRemapClientoperator= (const CRemapClient &value)
 

Private Attributes

string m_Url
 

Additional Inherited Members

- Public Types inherited from CRemapClient_Base
typedef CRemap_request TRequest
 
typedef CRemap_reply TReply
 
typedef CRMRequest TRequestChoice
 
typedef CRMReply TReplyChoice
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Protected Member Functions inherited from CRPCClient< CRemap_request, CRemap_reply >
static EHTTP_HeaderParse sx_ParseHeader (const char *http_header, void *user_data, int server_error)
 
static bool sx_IsSpecial (const STimeout *timeout)
 
- Static Protected Member Functions inherited from CRPCClient_Base
static const char * GetContentTypeHeader (ESerialDataFormat format)
 
- Protected Attributes inherited from CRPCClient< CRemap_request, CRemap_reply >
const STimeoutm_Timeout
 Cloned if not special. More...
 
- Protected Attributes inherited from CRPCClient_Base
string m_Service
 Used by default Connect(). More...
 
string m_Args
 
unique_ptr< CNcbiIostreamm_Stream
 
unique_ptr< CObjectIStreamm_In
 
unique_ptr< CObjectOStreamm_Out
 
string m_Affinity
 
unsigned int m_TryLimit
 
CHttpRetryContext m_RetryCtx
 
CConstIRef< ICanceledm_Canceler
 

Detailed Description

@remap_client.hpp User-defined methods of the data storage class.

This file was originally generated by application DATATOOL using the following specifications: 'remap.asn'.

New methods or data members can be added to it if needed. See also: remap_client_.hpp

Definition at line 56 of file remap_client.hpp.

Member Typedef Documentation

◆ Tparent

Definition at line 58 of file remap_client.hpp.

Constructor & Destructor Documentation

◆ CRemapClient() [1/2]

CRemapClient::CRemapClient ( const string url = kDefaultUrl)
inline

◆ ~CRemapClient()

CRemapClient::~CRemapClient ( void  )

Definition at line 58 of file remap_client.cpp.

◆ CRemapClient() [2/2]

CRemapClient::CRemapClient ( const CRemapClient value)
private

Member Function Documentation

◆ operator=()

CRemapClient& CRemapClient::operator= ( const CRemapClient value)
private

◆ Remap() [1/2]

CRef<objects::CSeq_loc> CRemapClient::Remap ( const objects::CSeq_loc &  loc,
const string from_build,
const string to_build 
)

Remap a single Seq-loc.

◆ Remap() [2/2]

void CRemapClient::Remap ( const vector< CRef< objects::CSeq_loc > > &  locs,
const string from_build,
const string to_build,
vector< CRef< objects::CSeq_loc > > &  result 
)

Remap multiple Seq-locs.

◆ x_Connect()

void CRemapClient::x_Connect ( )
protectedvirtual

These run with m_Mutex already acquired.

Reimplemented from CRPCClient< CRemap_request, CRemap_reply >.

Definition at line 65 of file remap_client.cpp.

References m_Url, and CRPCClient< CRemap_request, CRemap_reply >::x_ConnectURL().

Member Data Documentation

◆ kDefaultUrl

const char * CRemapClient::kDefaultUrl = "http://intrawebdev8/staff/jcherry/remap/remap_server.cgi"
static

Definition at line 77 of file remap_client.hpp.

◆ m_Url

string CRemapClient::m_Url
private

Definition at line 88 of file remap_client.hpp.

Referenced by x_Connect().


The documentation for this class was generated from the following files:
Modified on Tue Jun 18 13:38:44 2024 by modify_doxy.py rev. 669887