CRemoveProteins Class Reference

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#include <gui/packages/pkg_sequence_edit/remove_sequences.hpp>

Static Public Member Functions
static CRef< CCmdComposite >	JustRemoveProteins (objects::CSeq_entry_Handle seh)
static CRef< CCmdComposite >	AndRenormalizeNucProtSets (objects::CSeq_entry_Handle seh)
static CRef< CCmdComposite >	OrphanedProteins (objects::CSeq_entry_Handle seh)

Detailed Description

Definition at line 96 of file remove_sequences.hpp.

Member Function Documentation

AndRenormalizeNucProtSets()

CRef< CCmdComposite > CRemoveProteins::AndRenormalizeNucProtSets ( objects::CSeq_entry_Handle  seh )

static

Definition at line 440 of file remove_sequences.cpp.

References cmd.

Referenced by CSequenceEditingEventHandler::RemoveProteinsAndRenormalizeNucProtSets().

JustRemoveProteins()

CRef< CCmdComposite > CRemoveProteins::JustRemoveProteins ( objects::CSeq_entry_Handle  seh )

static

Definition at line 454 of file remove_sequences.cpp.

References cmd.

Referenced by CSequenceEditingEventHandler::JustRemoveProteins().

OrphanedProteins()

CRef< CCmdComposite > CRemoveProteins::OrphanedProteins ( objects::CSeq_entry_Handle  seh )

static

Definition at line 469 of file remove_sequences.cpp.

References cmd, set< Key, Compare >::end(), CSeqFeatData::eSubtype_cdregion, set< Key, Compare >::find(), CScope::GetBioseqHandle(), CBioseq_Handle::GetScope(), set< Key, Compare >::insert(), and CBioseq_Handle::IsProtein().

Referenced by handler_eErr_SEQ_PKG_OrphanedProtein(), and CSequenceEditingEventHandler::RemoveOrphanedProteins().

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The documentation for this class was generated from the following files:

• include/gui/packages/pkg_sequence_edit/remove_sequences.hpp
• src/gui/packages/pkg_sequence_edit/remove_sequences.cpp