#include <misc/xmlreaders/rfam_tool.hpp>

Collaboration diagram for CRfamTool:

Public Member Functions
	CRfamTool ()

	CRfamTool (const string &xmlfile)

bool	GetModelByAccession (const string &accession, CRfamModel &model)

bool	GetModelByIdentification (const string &model_identification, CRfamModel &model)

Static Private Member Functions
static bool	sx_GetModel (xml::node &node, CRfamModel &model)

Private Attributes
xml::document	m_doc

Detailed Description

Definition at line 58 of file rfam_tool.hpp.

Constructor & Destructor Documentation

◆ CRfamTool() [1/2]

CRfamTool::CRfamTool ( )

inline

Definition at line 61 of file rfam_tool.hpp.

◆ CRfamTool() [2/2]

CRfamTool::CRfamTool ( const string & xmlfile )

Definition at line 45 of file rfam_tool.cpp.

References m_doc, NULL, and xml::document::swap().

Member Function Documentation

◆ GetModelByAccession()

bool CRfamTool::GetModelByAccession	(	const string &	accession,
		CRfamModel &	model
	)

Definition at line 52 of file rfam_tool.cpp.

References xml::node_set::begin(), ERR_POST, Error(), xml::document::get_root_node(), m_doc, xml::node::run_xpath_query(), xml::node_set::size(), and sx_GetModel().

◆ GetModelByIdentification()

bool CRfamTool::GetModelByIdentification	(	const string &	model_identification,
		CRfamModel &	model
	)

Definition at line 70 of file rfam_tool.cpp.

References xml::node_set::begin(), ERR_POST, Error(), xml::document::get_root_node(), m_doc, xml::node::run_xpath_query(), xml::node_set::size(), and sx_GetModel().

◆ sx_GetModel()

bool CRfamTool::sx_GetModel	(	xml::node &	node,
		CRfamModel &	model
	)

staticprivate

Definition at line 89 of file rfam_tool.cpp.

References CRfamModel::AddParameter(), NON_CONST_ITERATE, and result.

Referenced by GetModelByAccession(), and GetModelByIdentification().

Member Data Documentation

◆ m_doc

xml::document CRfamTool::m_doc

private

Definition at line 86 of file rfam_tool.hpp.

Referenced by CRfamTool(), GetModelByAccession(), and GetModelByIdentification().

The documentation for this class was generated from the following files:

include/misc/xmlreaders/rfam_tool.hpp
src/misc/xmlreaders/rfam_tool.cpp

Public Member Functions

Static Private Member Functions

Private Attributes