Search Toolkit Book for CRsStruct_Base::C_Attlist
#include <objects/docsum/RsStruct_.hpp>
Inheritance diagram for CRsStruct_Base::C_Attlist:
Collaboration diagram for CRsStruct_Base::C_Attlist:
Public Types | |
| enum class | E_memberIndex { e__allMandatory = 0 , e_protAcc , e_protGi , e_protLoc , e_protResidue , e_rsResidue , e_structGi , e_structLoc , e_structResidue } |
| typedef string | TProtAcc |
| typedef int | TProtGi |
| typedef int | TProtLoc |
| typedef string | TProtResidue |
| typedef string | TRsResidue |
| typedef int | TStructGi |
| typedef int | TStructLoc |
| typedef string | TStructResidue |
| typedef Tparent::CMemberIndex< E_memberIndex, 9 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
Public Member Functions | |
| C_Attlist (void) | |
| ~C_Attlist (void) | |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetProtAcc (void) const |
| accession of the protein with variation Check if a value has been assigned to ProtAcc data member. More... | |
| bool | CanGetProtAcc (void) const |
| Check if it is safe to call GetProtAcc method. More... | |
| void | ResetProtAcc (void) |
| Reset ProtAcc data member. More... | |
| const TProtAcc & | GetProtAcc (void) const |
| Get the ProtAcc member data. More... | |
| void | SetProtAcc (const TProtAcc &value) |
| Assign a value to ProtAcc data member. More... | |
| void | SetProtAcc (TProtAcc &&value) |
| TProtAcc & | SetProtAcc (void) |
| Assign a value to ProtAcc data member. More... | |
| bool | IsSetProtGi (void) const |
| GI of the protein with variation Check if a value has been assigned to ProtGi data member. More... | |
| bool | CanGetProtGi (void) const |
| Check if it is safe to call GetProtGi method. More... | |
| void | ResetProtGi (void) |
| Reset ProtGi data member. More... | |
| TProtGi | GetProtGi (void) const |
| Get the ProtGi member data. More... | |
| void | SetProtGi (TProtGi value) |
| Assign a value to ProtGi data member. More... | |
| TProtGi & | SetProtGi (void) |
| Assign a value to ProtGi data member. More... | |
| bool | IsSetProtLoc (void) const |
| position of the residue for the protein GI Check if a value has been assigned to ProtLoc data member. More... | |
| bool | CanGetProtLoc (void) const |
| Check if it is safe to call GetProtLoc method. More... | |
| void | ResetProtLoc (void) |
| Reset ProtLoc data member. More... | |
| TProtLoc | GetProtLoc (void) const |
| Get the ProtLoc member data. More... | |
| void | SetProtLoc (TProtLoc value) |
| Assign a value to ProtLoc data member. More... | |
| TProtLoc & | SetProtLoc (void) |
| Assign a value to ProtLoc data member. More... | |
| bool | IsSetProtResidue (void) const |
| residue specified for protein at prot-loc location Check if a value has been assigned to ProtResidue data member. More... | |
| bool | CanGetProtResidue (void) const |
| Check if it is safe to call GetProtResidue method. More... | |
| void | ResetProtResidue (void) |
| Reset ProtResidue data member. More... | |
| const TProtResidue & | GetProtResidue (void) const |
| Get the ProtResidue member data. More... | |
| void | SetProtResidue (const TProtResidue &value) |
| Assign a value to ProtResidue data member. More... | |
| void | SetProtResidue (TProtResidue &&value) |
| TProtResidue & | SetProtResidue (void) |
| Assign a value to ProtResidue data member. More... | |
| bool | IsSetRsResidue (void) const |
| alternative residue specified by variation sequence Check if a value has been assigned to RsResidue data member. More... | |
| bool | CanGetRsResidue (void) const |
| Check if it is safe to call GetRsResidue method. More... | |
| void | ResetRsResidue (void) |
| Reset RsResidue data member. More... | |
| const TRsResidue & | GetRsResidue (void) const |
| Get the RsResidue member data. More... | |
| void | SetRsResidue (const TRsResidue &value) |
| Assign a value to RsResidue data member. More... | |
| void | SetRsResidue (TRsResidue &&value) |
| TRsResidue & | SetRsResidue (void) |
| Assign a value to RsResidue data member. More... | |
| bool | IsSetStructGi (void) const |
| GI of the structure neighbor Check if a value has been assigned to StructGi data member. More... | |
| bool | CanGetStructGi (void) const |
| Check if it is safe to call GetStructGi method. More... | |
| void | ResetStructGi (void) |
| Reset StructGi data member. More... | |
| TStructGi | GetStructGi (void) const |
| Get the StructGi member data. More... | |
| void | SetStructGi (TStructGi value) |
| Assign a value to StructGi data member. More... | |
| TStructGi & | SetStructGi (void) |
| Assign a value to StructGi data member. More... | |
| bool | IsSetStructLoc (void) const |
| position of the residue for the structure GI Check if a value has been assigned to StructLoc data member. More... | |
| bool | CanGetStructLoc (void) const |
| Check if it is safe to call GetStructLoc method. More... | |
| void | ResetStructLoc (void) |
| Reset StructLoc data member. More... | |
| TStructLoc | GetStructLoc (void) const |
| Get the StructLoc member data. More... | |
| void | SetStructLoc (TStructLoc value) |
| Assign a value to StructLoc data member. More... | |
| TStructLoc & | SetStructLoc (void) |
| Assign a value to StructLoc data member. More... | |
| bool | IsSetStructResidue (void) const |
| residue specified for protein at struct-loc location Check if a value has been assigned to StructResidue data member. More... | |
| bool | CanGetStructResidue (void) const |
| Check if it is safe to call GetStructResidue method. More... | |
| void | ResetStructResidue (void) |
| Reset StructResidue data member. More... | |
| const TStructResidue & | GetStructResidue (void) const |
| Get the StructResidue member data. More... | |
| void | SetStructResidue (const TStructResidue &value) |
| Assign a value to StructResidue data member. More... | |
| void | SetStructResidue (TStructResidue &&value) |
| TStructResidue & | SetStructResidue (void) |
| Assign a value to StructResidue data member. More... | |
| void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CSerialObject | Tparent |
Private Member Functions | |
| C_Attlist (const C_Attlist &) | |
| C_Attlist & | operator= (const C_Attlist &) |
Private Attributes | |
| Uint4 | m_set_State [1] |
| string | m_ProtAcc |
| int | m_ProtGi |
| int | m_ProtLoc |
| string | m_ProtResidue |
| string | m_RsResidue |
| int | m_StructGi |
| int | m_StructLoc |
| string | m_StructResidue |
Additional Inherited Members | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
C_Attlist –.
Definition at line 90 of file RsStruct_.hpp.
The documentation for this class was generated from the following files:
- include/objects/docsum/RsStruct_.hpp
- src/objects/docsum/RsStruct_.cpp
