NCBI C++ ToolKit
Public Types | Public Member Functions | Private Types | Private Member Functions | Private Attributes | List of all members

Search Toolkit Book for CRs_Base::C_Validation::C_Attlist

C_Attlist –. More...

#include <objects/docsum/Rs_.hpp>

+ Inheritance diagram for CRs_Base::C_Validation::C_Attlist:
+ Collaboration diagram for CRs_Base::C_Validation::C_Attlist:

Public Types

enum class  E_memberIndex {
  e__allMandatory = 0 , e_byCluster , e_byFrequency , e_byOtherPop ,
  e_by2Hit2Allele , e_byHapMap , e_by1000G , e_suspect
}
 
typedef bool TByCluster
 
typedef bool TByFrequency
 
typedef bool TByOtherPop
 
typedef bool TBy2Hit2Allele
 
typedef bool TByHapMap
 
typedef bool TBy1000G
 
typedef bool TSuspect
 
typedef Tparent::CMemberIndex< E_memberIndex, 8 > TmemberIndex
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 

Public Member Functions

 C_Attlist (void)
 
 ~C_Attlist (void)
 
 DECLARE_INTERNAL_TYPE_INFO ()
 
bool IsSetByCluster (void) const
 at least one subsnp in cluster has frequency data submitted Check if a value has been assigned to ByCluster data member. More...
 
bool CanGetByCluster (void) const
 Check if it is safe to call GetByCluster method. More...
 
void ResetByCluster (void)
 Reset ByCluster data member. More...
 
TByCluster GetByCluster (void) const
 Get the ByCluster member data. More...
 
void SetByCluster (TByCluster value)
 Assign a value to ByCluster data member. More...
 
TByClusterSetByCluster (void)
 Assign a value to ByCluster data member. More...
 
bool IsSetByFrequency (void) const
 Validated by allele frequency Check if a value has been assigned to ByFrequency data member. More...
 
bool CanGetByFrequency (void) const
 Check if it is safe to call GetByFrequency method. More...
 
void ResetByFrequency (void)
 Reset ByFrequency data member. More...
 
TByFrequency GetByFrequency (void) const
 Get the ByFrequency member data. More...
 
void SetByFrequency (TByFrequency value)
 Assign a value to ByFrequency data member. More...
 
TByFrequencySetByFrequency (void)
 Assign a value to ByFrequency data member. More...
 
bool IsSetByOtherPop (void) const
 Check if a value has been assigned to ByOtherPop data member. More...
 
bool CanGetByOtherPop (void) const
 Check if it is safe to call GetByOtherPop method. More...
 
void ResetByOtherPop (void)
 Reset ByOtherPop data member. More...
 
TByOtherPop GetByOtherPop (void) const
 Get the ByOtherPop member data. More...
 
void SetByOtherPop (TByOtherPop value)
 Assign a value to ByOtherPop data member. More...
 
TByOtherPopSetByOtherPop (void)
 Assign a value to ByOtherPop data member. More...
 
bool IsSetBy2Hit2Allele (void) const
 cluster has 2+ submissions, with 1+ submissions assayed with a non-computational method Check if a value has been assigned to By2Hit2Allele data member. More...
 
bool CanGetBy2Hit2Allele (void) const
 Check if it is safe to call GetBy2Hit2Allele method. More...
 
void ResetBy2Hit2Allele (void)
 Reset By2Hit2Allele data member. More...
 
TBy2Hit2Allele GetBy2Hit2Allele (void) const
 Get the By2Hit2Allele member data. More...
 
void SetBy2Hit2Allele (TBy2Hit2Allele value)
 Assign a value to By2Hit2Allele data member. More...
 
TBy2Hit2AlleleSetBy2Hit2Allele (void)
 Assign a value to By2Hit2Allele data member. More...
 
bool IsSetByHapMap (void) const
 Validated by HapMap Project Check if a value has been assigned to ByHapMap data member. More...
 
bool CanGetByHapMap (void) const
 Check if it is safe to call GetByHapMap method. More...
 
void ResetByHapMap (void)
 Reset ByHapMap data member. More...
 
TByHapMap GetByHapMap (void) const
 Get the ByHapMap member data. More...
 
void SetByHapMap (TByHapMap value)
 Assign a value to ByHapMap data member. More...
 
TByHapMapSetByHapMap (void)
 Assign a value to ByHapMap data member. More...
 
bool IsSetBy1000G (void) const
 Validated by 1000 Genomes Project Check if a value has been assigned to By1000G data member. More...
 
bool CanGetBy1000G (void) const
 Check if it is safe to call GetBy1000G method. More...
 
void ResetBy1000G (void)
 Reset By1000G data member. More...
 
TBy1000G GetBy1000G (void) const
 Get the By1000G member data. More...
 
void SetBy1000G (TBy1000G value)
 Assign a value to By1000G data member. More...
 
TBy1000GSetBy1000G (void)
 Assign a value to By1000G data member. More...
 
bool IsSetSuspect (void) const
 Suspected to be false SNP Check if a value has been assigned to Suspect data member. More...
 
bool CanGetSuspect (void) const
 Check if it is safe to call GetSuspect method. More...
 
void ResetSuspect (void)
 Reset Suspect data member. More...
 
TSuspect GetSuspect (void) const
 Get the Suspect member data. More...
 
void SetSuspect (TSuspect value)
 Assign a value to Suspect data member. More...
 
TSuspectSetSuspect (void)
 Assign a value to Suspect data member. More...
 
void Reset (void)
 Reset the whole object. More...
 
- Public Member Functions inherited from CSerialObject
 CSerialObject (void)
 
virtual ~CSerialObject (void)
 
virtual const CTypeInfoGetThisTypeInfo (void) const =0
 
virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
 Set object to copy of another one. More...
 
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
 Check if both objects contain the same values. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
void ThrowUnassigned (TMemberIndex index) const
 
void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const
 
bool HasNamespaceName (void) const
 Check if object data type has namespace name. More...
 
const stringGetNamespaceName (void) const
 Get namespace name. More...
 
bool HasNamespacePrefix (void) const
 Check if data type has namespace prefix. More...
 
const stringGetNamespacePrefix (void) const
 Get namespace prefix. More...
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 

Private Types

typedef CSerialObject Tparent
 

Private Member Functions

 C_Attlist (const C_Attlist &)
 
C_Attlistoperator= (const C_Attlist &)
 

Private Attributes

Uint4 m_set_State [1]
 
bool m_ByCluster
 
bool m_ByFrequency
 
bool m_ByOtherPop
 
bool m_By2Hit2Allele
 
bool m_ByHapMap
 
bool m_By1000G
 
bool m_Suspect
 

Additional Inherited Members

- Static Public Member Functions inherited from CSerialObject
static void SetVerifyDataThread (ESerialVerifyData verify)
 
static void SetVerifyDataGlobal (ESerialVerifyData verify)
 
static string UnassignedString (void)
 
static CStringUTF8 UnassignedStringUTF8 (void)
 
static char UnassignedByte (void)
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Public Attributes inherited from CSerialObject
static const char * ms_UnassignedStr = "<*unassigned*>"
 
static const char ms_UnassignedByte = char(0xcd)
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Detailed Description

C_Attlist –.

Definition at line 839 of file Rs_.hpp.


The documentation for this class was generated from the following files:
Modified on Fri Sep 20 14:57:48 2024 by modify_doxy.py rev. 669887