CSelectionVisitor Class Reference

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class CSelectionVisitor is a concrete glyph visitor for selection traversal and deselection traversal on a layout tree. More...

#include <gui/widgets/seq_graphic/selection_manager.hpp>

Inheritance diagram for CSelectionVisitor:

Collaboration diagram for CSelectionVisitor:

Public Types
enum	EActionMode { eAct_Select , eAct_Deselect , eAct_CollectSel }
enum	EPostUpdateAction { ePUA_None , ePUA_CallLayoutChanged }
	action that needs to be executed on selected glyphs after the visitor finishes visiting _all_ glyphs More...
typedef EActionMode	TActionMode
typedef list< CWeakRef< CSeqGlyph > >	TSelectedGlyphs

Public Member Functions
	CSelectionVisitor ()
virtual	~CSelectionVisitor ()
void	SetScope (objects::CScope *scope)
objects::CScope *	GetScope ()
void	SetActionMode (TActionMode mode)
	CSelectionVisitor inline methods. More...
void	SetSelectedObjectSig (const string &obj_sig)
void	Clear ()
bool	HasSelectedObjects () const
bool	IsObjectSelected (const CObject *obj)
const CSeqGlyph::TConstObjects &	GetSelectedLayoutObjects (CSeqGlyph *top_glyph)
void	GetObjectSelection (TConstObjects &objs) const
void	ResetObjectSelection (CSeqGlyph *glyph)
void	DeSelectObject (const CObject *obj)
void	SelectObject (const CObject *obj, bool verified)
void	SelectSelection (const CSeqGlyph::TConstObjects &glyphs)
void	UpdateSelection (CSeqGlyph *glyph)
const TSelectedGlyphs &	GetSelectedFeats () const
const TSelectedGlyphs &	GetSelectedCDSFeats () const
void	ClearSelectedFeats ()
IGlyphVisitor interface implementation
virtual bool	Visit (CSeqGlyph *glyph)
Public Member Functions inherited from IGlyphVisitor
virtual	~IGlyphVisitor ()

Private Types
typedef set< CConstRef< CObject > >	TSelectedObjects

Private Member Functions
bool	x_DoSelection (CSeqGlyph *glyph)
bool	x_NeedUpdate () const

Private Attributes
CObjectIndex	m_SelectedIndexes
TSelectedObjects	m_SelectedObjects
CObjectIndex	m_UnknownSelectedIndexes
list< string >	m_SelectedSignatures
CSeqGlyph::TConstObjects	m_SelGlyphs
TSelectedGlyphs	m_SelFeatures
TSelectedGlyphs	m_SelCDSFeatures
TModelRect	m_SelRect
CRef< objects::CScope >	m_Scope
TActionMode	m_ActionMode
size_t	m_TraversedObjs
size_t	m_TraversedSigs
size_t	m_DeselectedObjs
EPostUpdateAction	m_PostUpdateAction

Detailed Description

class CSelectionVisitor is a concrete glyph visitor for selection traversal and deselection traversal on a layout tree.

The selected objects can be objects broadcasted from other views, signatures from cgi, or user-selected objects in current view.

Definition at line 50 of file selection_manager.hpp.

Member Typedef Documentation

TActionMode

typedef EActionMode CSelectionVisitor::TActionMode

Definition at line 67 of file selection_manager.hpp.

TSelectedGlyphs

typedef list< CWeakRef<CSeqGlyph> > CSelectionVisitor::TSelectedGlyphs

Definition at line 68 of file selection_manager.hpp.

TSelectedObjects

typedef set< CConstRef<CObject> > CSelectionVisitor::TSelectedObjects

private

Definition at line 121 of file selection_manager.hpp.

Member Enumeration Documentation

EActionMode

enum CSelectionVisitor::EActionMode

Enumerator
eAct_Select
eAct_Deselect
eAct_CollectSel

Definition at line 53 of file selection_manager.hpp.

EPostUpdateAction

enum CSelectionVisitor::EPostUpdateAction

action that needs to be executed on selected glyphs after the visitor finishes visiting _all_ glyphs

Enumerator
ePUA_None
ePUA_CallLayoutChanged	call LayoutChanged for all glyphs that are CFeatGlyph

Definition at line 61 of file selection_manager.hpp.

Constructor & Destructor Documentation

CSelectionVisitor()

CSelectionVisitor::CSelectionVisitor ( )

inline

Definition at line 70 of file selection_manager.hpp.

~CSelectionVisitor()

virtual CSelectionVisitor::~CSelectionVisitor ( )

inlinevirtual

Definition at line 78 of file selection_manager.hpp.

Member Function Documentation

Clear()

void CSelectionVisitor::Clear

(

void

)

Definition at line 83 of file selection_manager.cpp.

References set< Key, Compare >::clear(), CObjectIndex::Clear(), ePUA_None, m_PostUpdateAction, m_Scope, m_SelCDSFeatures, m_SelectedIndexes, m_SelectedObjects, m_SelFeatures, and m_UnknownSelectedIndexes.

Referenced by CAlnVecRow::OnMouseEvent(), CSeqGraphicRenderer::SetInputObject(), and SetScope().

ClearSelectedFeats()

void CSelectionVisitor::ClearSelectedFeats ( )

inline

Definition at line 171 of file selection_manager.hpp.

References ePUA_None, m_PostUpdateAction, m_SelCDSFeatures, and m_SelFeatures.

Referenced by CSeqGraphicRenderer::OnDataChanged(), and CSeqGraphicRenderer::OnDataChanging().

DeSelectObject()

void CSelectionVisitor::DeSelectObject

(

const CObject *

obj

)

Definition at line 169 of file selection_manager.cpp.

References set< Key, Compare >::clear(), CObjectIndex::Clear(), eGetId_Canonical, CObjectIndex::Empty(), set< Key, Compare >::empty(), set< Key, Compare >::end(), set< Key, Compare >::erase(), set< Key, Compare >::find(), GetId(), IsObjectSelected(), m_DeselectedObjs, m_Scope, m_SelectedIndexes, m_SelectedObjects, NON_CONST_ITERATE, and CObjectIndex::Remove().

Referenced by CSeqGraphicRenderer::DeSelectObject(), and CAlnVecRow::OnMouseEvent().

GetObjectSelection()

void CSelectionVisitor::GetObjectSelection

(

TConstObjects &

objs

)

const

Definition at line 146 of file selection_manager.cpp.

References ITERATE, m_SelectedObjects, and set< Key, Compare >::size().

Referenced by CSeqGraphicRenderer::GetObjectSelection(), and CAlnMultiPane::GetObjectSelection().

GetScope()

objects::CScope * CSelectionVisitor::GetScope

(

void

)

Definition at line 47 of file selection_manager.cpp.

References CRef< C, Locker >::GetPointer(), and m_Scope.

Referenced by CAlnMultiPane::TTHH_ProcessURL().

GetSelectedCDSFeats()

const CSelectionVisitor::TSelectedGlyphs & CSelectionVisitor::GetSelectedCDSFeats ( ) const

inline

Definition at line 166 of file selection_manager.hpp.

References m_SelCDSFeatures.

Referenced by CSeqGraphicRenderer::CSeqGraphicRenderer().

GetSelectedFeats()

const CSelectionVisitor::TSelectedGlyphs & CSelectionVisitor::GetSelectedFeats ( ) const

inline

Definition at line 161 of file selection_manager.hpp.

References m_SelFeatures.

Referenced by CSeqGraphicRenderer::CSeqGraphicRenderer().

GetSelectedLayoutObjects()

const CSeqGlyph::TConstObjects & CSelectionVisitor::GetSelectedLayoutObjects

(

CSeqGlyph *

top_glyph

)

Definition at line 136 of file selection_manager.cpp.

References CSeqGlyph::Accept(), eAct_CollectSel, m_SelGlyphs, and SetActionMode().

Referenced by CSeqGraphicRenderer::GetSelectedLayoutObjects().

HasSelectedObjects()

bool CSelectionVisitor::HasSelectedObjects ( ) const

inline

Definition at line 156 of file selection_manager.hpp.

References set< Key, Compare >::empty(), and m_SelectedObjects.

Referenced by CSeqGraphicRenderer::DeSelectObject(), CAlnMultiPane::HasSelectedObjects(), CSeqGraphicRenderer::HasSelectedObjects(), and CAlnVecRow::OnMouseEvent().

IsObjectSelected()

bool CSelectionVisitor::IsObjectSelected

(

const CObject *

obj

)

Definition at line 95 of file selection_manager.cpp.

References CSeqFeatData::eSubtype_variation, CSeq_feat_Base::GetData(), CSeqFeatData::GetSubtype(), CObjectIndex::HasMatches(), m_Scope, m_SelectedIndexes, m_SelectedObjects, and CVcfVariant::WeakMatch().

Referenced by DeSelectObject(), CSeqGraphicRenderer::IsObjectSelected(), CAlnVecRow::OnMouseEvent(), and x_DoSelection().

ResetObjectSelection()

void CSelectionVisitor::ResetObjectSelection

(

CSeqGlyph *

glyph

)

Definition at line 155 of file selection_manager.cpp.

References CSeqGlyph::Accept(), set< Key, Compare >::clear(), CObjectIndex::Clear(), eAct_Deselect, m_Scope, m_SelCDSFeatures, m_SelectedIndexes, m_SelectedObjects, m_SelFeatures, m_UnknownSelectedIndexes, SetActionMode(), and x_NeedUpdate().

Referenced by CSeqGraphicRenderer::ResetObjectSelection(), and CAlnVecRow::x_ResetTrackPanel().

SelectObject()

void CSelectionVisitor::SelectObject	(	const CObject *	obj,
		bool	verified
	)

Definition at line 203 of file selection_manager.cpp.

References CObjectIndex::Add(), CObjectIndex::HasMatches(), set< Key, Compare >::insert(), m_Scope, m_SelectedIndexes, m_SelectedObjects, m_UnknownSelectedIndexes, and NULL.

Referenced by CAlnVecRow::OnMouseEvent(), and CSeqGraphicRenderer::SelectObject().

SelectSelection()

void CSelectionVisitor::SelectSelection

(

const CSeqGlyph::TConstObjects &

glyphs

)

Definition at line 219 of file selection_manager.cpp.

References CObjectIndex::Add(), IObjectBasedGlyph::GetObjects(), set< Key, Compare >::insert(), ITERATE, m_SelectedIndexes, m_SelectedObjects, NON_CONST_ITERATE, and NULL.

Referenced by CSeqGraphicRenderer::SelectObjByRect().

SetActionMode()

void CSelectionVisitor::SetActionMode ( TActionMode  mode )

inline

CSelectionVisitor inline methods.

Definition at line 152 of file selection_manager.hpp.

References m_ActionMode.

Referenced by GetSelectedLayoutObjects(), ResetObjectSelection(), and UpdateSelection().

SetScope()

void CSelectionVisitor::SetScope

(

objects::CScope *

scope

)

Definition at line 41 of file selection_manager.cpp.

References Clear(), m_Scope, and CRef< C, Locker >::Reset().

Referenced by CAlnMultiPane::Init(), and CSeqGraphicRenderer::SetInputObject().

SetSelectedObjectSig()

void CSelectionVisitor::SetSelectedObjectSig

(

const string &

obj_sig

)

Definition at line 72 of file selection_manager.cpp.

References NStr::fSplit_Tokenize, m_SelectedSignatures, NON_CONST_ITERATE, NStr::Split(), and NStr::TruncateSpacesInPlace().

Referenced by CSeqGraphicRenderer::SelectObjectSig().

UpdateSelection()

void CSelectionVisitor::UpdateSelection

(

CSeqGlyph *

glyph

)

Definition at line 238 of file selection_manager.cpp.

References CSeqGlyph::Accept(), eAct_Select, CObjectIndex::Empty(), ePUA_CallLayoutChanged, ePUA_None, CRef< C, Locker >::GetPointerOrNull(), ITERATE, CFeatGlyph::LayoutChanged(), m_PostUpdateAction, m_SelCDSFeatures, m_SelectedObjects, m_SelFeatures, m_TraversedObjs, m_TraversedSigs, m_UnknownSelectedIndexes, NON_CONST_ITERATE, CRef< C, Locker >::NotNull(), CObjectIndex::Remove(), SetActionMode(), and x_NeedUpdate().

Referenced by CSeqGraphicRenderer::GetHeight(), CAlnVecRow::LTH_OnLayoutChanged(), CSeqGraphicRenderer::x_Draw(), CSeqGraphicRenderer::x_DrawVectorGraphics(), CAlnVecRow::x_HitTest(), and CAlnVecRow::x_RenderTracks().

Visit()

bool CSelectionVisitor::Visit ( CSeqGlyph *  glyph )

virtual

Returns

true if continue to next visiting.

Implements IGlyphVisitor.

Definition at line 52 of file selection_manager.cpp.

References _ASSERT, eAct_CollectSel, eAct_Deselect, eAct_Select, CSeqGlyph::IsSelected(), m_ActionMode, m_SelGlyphs, CSeqGlyph::SetSelected(), and x_DoSelection().

x_DoSelection()

bool CSelectionVisitor::x_DoSelection ( CSeqGlyph *  glyph )

private

Definition at line 273 of file selection_manager.cpp.

References CObjectIndex::Add(), CObjectIndex::Empty(), ePUA_CallLayoutChanged, IObjectBasedGlyph::GetObjects(), IObjectBasedGlyph::GetSignature(), CObjectIndex::HasMatches(), set< Key, Compare >::insert(), IsObjectSelected(), CSeqGlyph::IsSelected(), ITERATE, m_DeselectedObjs, m_PostUpdateAction, m_Scope, m_SelCDSFeatures, m_SelectedIndexes, m_SelectedObjects, m_SelectedSignatures, m_SelFeatures, m_TraversedObjs, m_TraversedSigs, m_UnknownSelectedIndexes, NULL, results, and CSeqGlyph::SetSelected().

Referenced by Visit().

x_NeedUpdate()

bool CSelectionVisitor::x_NeedUpdate ( ) const

inlineprivate

Definition at line 179 of file selection_manager.hpp.

References CObjectIndex::Empty(), set< Key, Compare >::empty(), m_DeselectedObjs, m_SelectedIndexes, m_SelectedObjects, m_SelectedSignatures, and m_UnknownSelectedIndexes.

Referenced by ResetObjectSelection(), and UpdateSelection().

Member Data Documentation

m_ActionMode

TActionMode CSelectionVisitor::m_ActionMode

private

Definition at line 138 of file selection_manager.hpp.

Referenced by SetActionMode(), and Visit().

m_DeselectedObjs

size_t CSelectionVisitor::m_DeselectedObjs

private

Definition at line 142 of file selection_manager.hpp.

Referenced by DeSelectObject(), x_DoSelection(), and x_NeedUpdate().

m_PostUpdateAction

EPostUpdateAction CSelectionVisitor::m_PostUpdateAction

private

Definition at line 144 of file selection_manager.hpp.

Referenced by Clear(), ClearSelectedFeats(), UpdateSelection(), and x_DoSelection().

m_Scope

CRef<objects::CScope> CSelectionVisitor::m_Scope

private

Definition at line 137 of file selection_manager.hpp.

Referenced by Clear(), DeSelectObject(), GetScope(), IsObjectSelected(), ResetObjectSelection(), SelectObject(), SetScope(), and x_DoSelection().

m_SelCDSFeatures

TSelectedGlyphs CSelectionVisitor::m_SelCDSFeatures

private

Definition at line 133 of file selection_manager.hpp.

Referenced by Clear(), ClearSelectedFeats(), GetSelectedCDSFeats(), ResetObjectSelection(), UpdateSelection(), and x_DoSelection().

m_SelectedIndexes

CObjectIndex CSelectionVisitor::m_SelectedIndexes

private

Definition at line 123 of file selection_manager.hpp.

Referenced by Clear(), DeSelectObject(), IsObjectSelected(), ResetObjectSelection(), SelectObject(), SelectSelection(), x_DoSelection(), and x_NeedUpdate().

m_SelectedObjects

TSelectedObjects CSelectionVisitor::m_SelectedObjects

private

Definition at line 124 of file selection_manager.hpp.

Referenced by Clear(), DeSelectObject(), GetObjectSelection(), HasSelectedObjects(), IsObjectSelected(), ResetObjectSelection(), SelectObject(), SelectSelection(), UpdateSelection(), x_DoSelection(), and x_NeedUpdate().

m_SelectedSignatures

list<string> CSelectionVisitor::m_SelectedSignatures

private

Definition at line 129 of file selection_manager.hpp.

Referenced by SetSelectedObjectSig(), x_DoSelection(), and x_NeedUpdate().

m_SelFeatures

TSelectedGlyphs CSelectionVisitor::m_SelFeatures

private

Definition at line 132 of file selection_manager.hpp.

Referenced by Clear(), ClearSelectedFeats(), GetSelectedFeats(), ResetObjectSelection(), UpdateSelection(), and x_DoSelection().

m_SelGlyphs

CSeqGlyph::TConstObjects CSelectionVisitor::m_SelGlyphs

private

Definition at line 130 of file selection_manager.hpp.

Referenced by GetSelectedLayoutObjects(), and Visit().

m_SelRect

TModelRect CSelectionVisitor::m_SelRect

private

Definition at line 135 of file selection_manager.hpp.

m_TraversedObjs

size_t CSelectionVisitor::m_TraversedObjs

private

Definition at line 140 of file selection_manager.hpp.

Referenced by UpdateSelection(), and x_DoSelection().

m_TraversedSigs

size_t CSelectionVisitor::m_TraversedSigs

private

Definition at line 141 of file selection_manager.hpp.

Referenced by UpdateSelection(), and x_DoSelection().

m_UnknownSelectedIndexes

CObjectIndex CSelectionVisitor::m_UnknownSelectedIndexes

private

Definition at line 127 of file selection_manager.hpp.

Referenced by Clear(), ResetObjectSelection(), SelectObject(), UpdateSelection(), x_DoSelection(), and x_NeedUpdate().

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The documentation for this class was generated from the following files:

• include/gui/widgets/seq_graphic/selection_manager.hpp
• src/gui/widgets/seq_graphic/selection_manager.cpp