CSeqDBSeqFile Member List

This is the complete list of members for CSeqDBSeqFile, including all inherited members.

AddReference(void) const	CObject	inline
CanBeDeleted(void) const THROWS_NONE	CObject	inline
CDebugDumpable(void)	CDebugDumpable	inline
CheckReferenceOverflow(TCount count) const	CObject	private
CObject(void)	CObject
CObject(const CObject &src)	CObject
CSeqDBExtFile(CSeqDBAtlas &atlas, const string &dbfilename, char prot_nucl)	CSeqDBExtFile
CSeqDBSeqFile(CSeqDBAtlas &atlas, const string &dbname, char prot_nucl)	CSeqDBSeqFile	inline
DebugDump(CDebugDumpContext ddc, unsigned int depth) const	CObject	virtual
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const	CDebugDumpable
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const	CDebugDumpable
DeleteThis(void)	CObject	protectedvirtual
DoDeleteThisObject(void)	CObject	virtual
DoNotDeleteThisObject(void)	CObject	virtual
DumpToConsole(void) const	CDebugDumpable
EAllocFillMode enum name	CObject
eAllocFillNone enum value	CObject
eAllocFillPattern enum value	CObject
eAllocFillZero enum value	CObject
eCounterBitsCanBeDeleted	CObject	static
eCounterBitsInPlainHeap	CObject	static
eCounterBitsPlaceMask	CObject	static
eCounterStateMask	CObject	static
eCounterStep	CObject	static
eCounterValid	CObject	static
EnableDebugDump(bool on)	CDebugDumpable	static
GetAllocFillMode(void)	CObject	static
GetFileDataPtr(TIndx start) const	CSeqDBSeqFile	inline
InitCounter(void)	CObject	inlineprivate
InvalidObject(void) const	CObject	private
IsAllocatedInPool(void) const THROWS_NONE	CObject	inline
m_Atlas	CSeqDBExtFile	protected
m_Counter	CObject	mutableprivate
m_File	CSeqDBExtFile	protected
m_FileName	CSeqDBExtFile	protected
m_Lease	CSeqDBExtFile	mutableprotected
m_ProtNucl	CSeqDBExtFile	protected
ObjectStateCanBeDeleted(TCount count)	CObject	inlineprivatestatic
ObjectStateIsAllocatedInPool(TCount count)	CObject	inlineprivatestatic
ObjectStateReferenced(TCount count)	CObject	inlineprivatestatic
ObjectStateReferencedOnlyOnce(TCount count)	CObject	inlineprivatestatic
ObjectStateUnreferenced(TCount count)	CObject	inlineprivatestatic
ObjectStateValid(TCount count)	CObject	inlineprivatestatic
operator delete(void *ptr)	CObject
operator delete(void *ptr, void *place)	CObject
operator delete(void *ptr, CObjectMemoryPool *place)	CObject
operator delete[](void *ptr)	CObject
operator new(size_t size)	CObject
operator new(size_t size, void *place)	CObject
operator new(size_t size, CObjectMemoryPool *place)	CObject
operator new[](size_t size)	CObject
operator=(const CObject &src) THROWS_NONE	CObject	inline
ReadBytes(char *buf, TIndx start, TIndx end) const	CSeqDBSeqFile	inline
Referenced(void) const THROWS_NONE	CObject	inline
ReferencedOnlyOnce(void) const THROWS_NONE	CObject	inline
ReleaseReference(void) const	CObject
RemoveLastReference(TCount count) const	CObject	private
RemoveReference(void) const	CObject	inline
SetAllocFillMode(EAllocFillMode mode)	CObject	static
SetAllocFillMode(const string &value)	CObject	static
sm_DumpEnabled	CDebugDumpable	privatestatic
TCount typedef	CObject
TCounter typedef	CObject
ThrowNullPointerException(void)	CObject	static
ThrowNullPointerException(const type_info &type)	CObject	static
TIndx typedef	CSeqDBSeqFile
TLockerType typedef	CObject
UnLease()	CSeqDBExtFile	inline
x_GetSeqType() const	CSeqDBExtFile	inlineprotected
x_ReadBytes(char *buf, TIndx start, TIndx end) const	CSeqDBExtFile	inlineprotected
x_ReadSwapped(CSeqDBFileMemMap &lease, TIndx offset, T *value)	CSeqDBExtFile	inlineprotected
x_SetFileType(char prot_nucl)	CSeqDBExtFile	inlineprotected
~CDebugDumpable(void)	CDebugDumpable	virtual
~CObject(void)	CObject	virtual
~CSeqDBExtFile()	CSeqDBExtFile	inlinevirtual
~CSeqDBSeqFile()	CSeqDBSeqFile	inlinevirtual