|
| CSeqEdit_Cmd (void) |
|
| CSeqEdit_Cmd (const string &blobid) |
|
| ~CSeqEdit_Cmd (void) |
|
const string & | GetBlobId () const |
|
| CSeqEdit_Cmd_Base (void) |
|
virtual | ~CSeqEdit_Cmd_Base (void) |
|
| DECLARE_INTERNAL_TYPE_INFO () |
|
virtual void | Reset (void) |
| Reset the whole object. More...
|
|
virtual void | ResetSelection (void) |
| Reset the selection (set it to e_not_set). More...
|
|
E_Choice | Which (void) const |
| Which variant is currently selected. More...
|
|
void | CheckSelected (E_Choice index) const |
| Verify selection, throw exception if it differs from the expected. More...
|
|
void | ThrowInvalidSelection (E_Choice index) const |
| Throw 'InvalidSelection' exception. More...
|
|
void | Select (E_Choice index, EResetVariant reset=eDoResetVariant) |
| Select the requested variant if needed. More...
|
|
void | Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool) |
| Select the requested variant if needed, allocating CObject variants from memory pool. More...
|
|
bool | IsAdd_id (void) const |
| Check if variant Add_id is selected. More...
|
|
const TAdd_id & | GetAdd_id (void) const |
| Get the variant data. More...
|
|
TAdd_id & | SetAdd_id (void) |
| Select the variant. More...
|
|
void | SetAdd_id (TAdd_id &value) |
| Select the variant and set its data. More...
|
|
bool | IsRemove_id (void) const |
| Check if variant Remove_id is selected. More...
|
|
const TRemove_id & | GetRemove_id (void) const |
| Get the variant data. More...
|
|
TRemove_id & | SetRemove_id (void) |
| Select the variant. More...
|
|
void | SetRemove_id (TRemove_id &value) |
| Select the variant and set its data. More...
|
|
bool | IsReset_ids (void) const |
| Check if variant Reset_ids is selected. More...
|
|
const TReset_ids & | GetReset_ids (void) const |
| Get the variant data. More...
|
|
TReset_ids & | SetReset_ids (void) |
| Select the variant. More...
|
|
void | SetReset_ids (TReset_ids &value) |
| Select the variant and set its data. More...
|
|
bool | IsChange_seqattr (void) const |
| Check if variant Change_seqattr is selected. More...
|
|
const TChange_seqattr & | GetChange_seqattr (void) const |
| Get the variant data. More...
|
|
TChange_seqattr & | SetChange_seqattr (void) |
| Select the variant. More...
|
|
void | SetChange_seqattr (TChange_seqattr &value) |
| Select the variant and set its data. More...
|
|
bool | IsReset_seqattr (void) const |
| Check if variant Reset_seqattr is selected. More...
|
|
const TReset_seqattr & | GetReset_seqattr (void) const |
| Get the variant data. More...
|
|
TReset_seqattr & | SetReset_seqattr (void) |
| Select the variant. More...
|
|
void | SetReset_seqattr (TReset_seqattr &value) |
| Select the variant and set its data. More...
|
|
bool | IsChange_setattr (void) const |
| Check if variant Change_setattr is selected. More...
|
|
const TChange_setattr & | GetChange_setattr (void) const |
| Get the variant data. More...
|
|
TChange_setattr & | SetChange_setattr (void) |
| Select the variant. More...
|
|
void | SetChange_setattr (TChange_setattr &value) |
| Select the variant and set its data. More...
|
|
bool | IsReset_setattr (void) const |
| Check if variant Reset_setattr is selected. More...
|
|
const TReset_setattr & | GetReset_setattr (void) const |
| Get the variant data. More...
|
|
TReset_setattr & | SetReset_setattr (void) |
| Select the variant. More...
|
|
void | SetReset_setattr (TReset_setattr &value) |
| Select the variant and set its data. More...
|
|
bool | IsAdd_descr (void) const |
| Check if variant Add_descr is selected. More...
|
|
const TAdd_descr & | GetAdd_descr (void) const |
| Get the variant data. More...
|
|
TAdd_descr & | SetAdd_descr (void) |
| Select the variant. More...
|
|
void | SetAdd_descr (TAdd_descr &value) |
| Select the variant and set its data. More...
|
|
bool | IsSet_descr (void) const |
| Check if variant Set_descr is selected. More...
|
|
const TSet_descr & | GetSet_descr (void) const |
| Get the variant data. More...
|
|
TSet_descr & | SetSet_descr (void) |
| Select the variant. More...
|
|
void | SetSet_descr (TSet_descr &value) |
| Select the variant and set its data. More...
|
|
bool | IsReset_descr (void) const |
| Check if variant Reset_descr is selected. More...
|
|
const TReset_descr & | GetReset_descr (void) const |
| Get the variant data. More...
|
|
TReset_descr & | SetReset_descr (void) |
| Select the variant. More...
|
|
void | SetReset_descr (TReset_descr &value) |
| Select the variant and set its data. More...
|
|
bool | IsAdd_desc (void) const |
| Check if variant Add_desc is selected. More...
|
|
const TAdd_desc & | GetAdd_desc (void) const |
| Get the variant data. More...
|
|
TAdd_desc & | SetAdd_desc (void) |
| Select the variant. More...
|
|
void | SetAdd_desc (TAdd_desc &value) |
| Select the variant and set its data. More...
|
|
bool | IsRemove_desc (void) const |
| Check if variant Remove_desc is selected. More...
|
|
const TRemove_desc & | GetRemove_desc (void) const |
| Get the variant data. More...
|
|
TRemove_desc & | SetRemove_desc (void) |
| Select the variant. More...
|
|
void | SetRemove_desc (TRemove_desc &value) |
| Select the variant and set its data. More...
|
|
bool | IsAttach_seq (void) const |
| Check if variant Attach_seq is selected. More...
|
|
const TAttach_seq & | GetAttach_seq (void) const |
| Get the variant data. More...
|
|
TAttach_seq & | SetAttach_seq (void) |
| Select the variant. More...
|
|
void | SetAttach_seq (TAttach_seq &value) |
| Select the variant and set its data. More...
|
|
bool | IsAttach_set (void) const |
| Check if variant Attach_set is selected. More...
|
|
const TAttach_set & | GetAttach_set (void) const |
| Get the variant data. More...
|
|
TAttach_set & | SetAttach_set (void) |
| Select the variant. More...
|
|
void | SetAttach_set (TAttach_set &value) |
| Select the variant and set its data. More...
|
|
bool | IsReset_seqentry (void) const |
| Check if variant Reset_seqentry is selected. More...
|
|
const TReset_seqentry & | GetReset_seqentry (void) const |
| Get the variant data. More...
|
|
TReset_seqentry & | SetReset_seqentry (void) |
| Select the variant. More...
|
|
void | SetReset_seqentry (TReset_seqentry &value) |
| Select the variant and set its data. More...
|
|
bool | IsAttach_seqentry (void) const |
| Check if variant Attach_seqentry is selected. More...
|
|
const TAttach_seqentry & | GetAttach_seqentry (void) const |
| Get the variant data. More...
|
|
TAttach_seqentry & | SetAttach_seqentry (void) |
| Select the variant. More...
|
|
void | SetAttach_seqentry (TAttach_seqentry &value) |
| Select the variant and set its data. More...
|
|
bool | IsRemove_seqentry (void) const |
| Check if variant Remove_seqentry is selected. More...
|
|
const TRemove_seqentry & | GetRemove_seqentry (void) const |
| Get the variant data. More...
|
|
TRemove_seqentry & | SetRemove_seqentry (void) |
| Select the variant. More...
|
|
void | SetRemove_seqentry (TRemove_seqentry &value) |
| Select the variant and set its data. More...
|
|
bool | IsAttach_annot (void) const |
| Check if variant Attach_annot is selected. More...
|
|
const TAttach_annot & | GetAttach_annot (void) const |
| Get the variant data. More...
|
|
TAttach_annot & | SetAttach_annot (void) |
| Select the variant. More...
|
|
void | SetAttach_annot (TAttach_annot &value) |
| Select the variant and set its data. More...
|
|
bool | IsRemove_annot (void) const |
| Check if variant Remove_annot is selected. More...
|
|
const TRemove_annot & | GetRemove_annot (void) const |
| Get the variant data. More...
|
|
TRemove_annot & | SetRemove_annot (void) |
| Select the variant. More...
|
|
void | SetRemove_annot (TRemove_annot &value) |
| Select the variant and set its data. More...
|
|
bool | IsAdd_annot (void) const |
| Check if variant Add_annot is selected. More...
|
|
const TAdd_annot & | GetAdd_annot (void) const |
| Get the variant data. More...
|
|
TAdd_annot & | SetAdd_annot (void) |
| Select the variant. More...
|
|
void | SetAdd_annot (TAdd_annot &value) |
| Select the variant and set its data. More...
|
|
bool | IsReplace_annot (void) const |
| Check if variant Replace_annot is selected. More...
|
|
const TReplace_annot & | GetReplace_annot (void) const |
| Get the variant data. More...
|
|
TReplace_annot & | SetReplace_annot (void) |
| Select the variant. More...
|
|
void | SetReplace_annot (TReplace_annot &value) |
| Select the variant and set its data. More...
|
|
| CSerialObject (void) |
|
virtual | ~CSerialObject (void) |
|
virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
|
virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More...
|
|
virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More...
|
|
virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More...
|
|
void | ThrowUnassigned (TMemberIndex index) const |
|
void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
|
bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More...
|
|
const string & | GetNamespaceName (void) const |
| Get namespace name. More...
|
|
bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More...
|
|
const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More...
|
|
| CObject (void) |
| Constructor. More...
|
|
| CObject (const CObject &src) |
| Copy constructor. More...
|
|
virtual | ~CObject (void) |
| Destructor. More...
|
|
CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More...
|
|
bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More...
|
|
bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More...
|
|
bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More...
|
|
bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More...
|
|
void | AddReference (void) const |
| Add reference to object. More...
|
|
void | RemoveReference (void) const |
| Remove reference to object. More...
|
|
void | ReleaseReference (void) const |
| Remove reference without deleting object. More...
|
|
virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More...
|
|
virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More...
|
|
void * | operator new (size_t size) |
| Define new operator for memory allocation. More...
|
|
void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More...
|
|
void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More...
|
|
void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More...
|
|
void * | operator new (size_t size, void *place) |
| Define new operator. More...
|
|
void | operator delete (void *ptr, void *place) |
| Define delete operator. More...
|
|
void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More...
|
|
void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More...
|
|
| CDebugDumpable (void) |
|
virtual | ~CDebugDumpable (void) |
|
void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
|
void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
|
void | DumpToConsole (void) const |
|
|
enum | E_Choice {
e_not_set = 0
, e_Add_id
, e_Remove_id
, e_Reset_ids
,
e_Change_seqattr
, e_Reset_seqattr
, e_Change_setattr
, e_Reset_setattr
,
e_Add_descr
, e_Set_descr
, e_Reset_descr
, e_Add_desc
,
e_Remove_desc
, e_Attach_seq
, e_Attach_set
, e_Reset_seqentry
,
e_Attach_seqentry
, e_Remove_seqentry
, e_Attach_annot
, e_Remove_annot
,
e_Add_annot
, e_Replace_annot
} |
| Choice variants. More...
|
|
enum | E_ChoiceStopper { e_MaxChoice = 22
} |
| Maximum+1 value of the choice variant enumerator. More...
|
|
typedef CSeqEdit_Cmd_AddId | TAdd_id |
|
typedef CSeqEdit_Cmd_RemoveId | TRemove_id |
|
typedef CSeqEdit_Cmd_ResetIds | TReset_ids |
|
typedef CSeqEdit_Cmd_ChangeSeqAttr | TChange_seqattr |
|
typedef CSeqEdit_Cmd_ResetSeqAttr | TReset_seqattr |
|
typedef CSeqEdit_Cmd_ChangeSetAttr | TChange_setattr |
|
typedef CSeqEdit_Cmd_ResetSetAttr | TReset_setattr |
|
typedef CSeqEdit_Cmd_AddDescr | TAdd_descr |
|
typedef CSeqEdit_Cmd_SetDescr | TSet_descr |
|
typedef CSeqEdit_Cmd_ResetDescr | TReset_descr |
|
typedef CSeqEdit_Cmd_AddDesc | TAdd_desc |
|
typedef CSeqEdit_Cmd_RemoveDesc | TRemove_desc |
|
typedef CSeqEdit_Cmd_AttachSeq | TAttach_seq |
|
typedef CSeqEdit_Cmd_AttachSet | TAttach_set |
|
typedef CSeqEdit_Cmd_ResetSeqEntry | TReset_seqentry |
|
typedef CSeqEdit_Cmd_AttachSeqEntry | TAttach_seqentry |
|
typedef CSeqEdit_Cmd_RemoveSeqEntry | TRemove_seqentry |
|
typedef CSeqEdit_Cmd_AttachAnnot | TAttach_annot |
|
typedef CSeqEdit_Cmd_RemoveAnnot | TRemove_annot |
|
typedef CSeqEdit_Cmd_AddAnnot | TAdd_annot |
|
typedef CSeqEdit_Cmd_ReplaceAnnot | TReplace_annot |
|
enum | EAllocFillMode { eAllocFillNone = 1
, eAllocFillZero
, eAllocFillPattern
} |
| Control filling of newly allocated memory. More...
|
|
typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More...
|
|
typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More...
|
|
typedef Uint8 | TCount |
| Alias for value type of counter. More...
|
|
static string | SelectionName (E_Choice index) |
| Retrieve selection name (for diagnostic purposes). More...
|
|
static void | SetVerifyDataThread (ESerialVerifyData verify) |
|
static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
|
static string | UnassignedString (void) |
|
static CStringUTF8 | UnassignedStringUTF8 (void) |
|
static char | UnassignedByte (void) |
|
static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More...
|
|
static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
|
static EAllocFillMode | GetAllocFillMode (void) |
|
static void | SetAllocFillMode (EAllocFillMode mode) |
|
static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More...
|
|
static void | EnableDebugDump (bool on) |
|
static const char * | ms_UnassignedStr = "<*unassigned*>" |
|
static const char | ms_UnassignedByte = char(0xcd) |
|
static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More...
|
|
static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More...
|
|
static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More...
|
|
static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More...
|
|
static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
|
|
static const TCount | eCounterStateMask |
| Valid object, and object in heap. More...
|
|
virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More...
|
|