NCBI C++ ToolKit
CSeqMaskerOstatOptAscii Member List

This is the complete list of members for CSeqMaskerOstatOptAscii, including all inherited members.

AddReference(void) constCObjectinline
allocCSeqMaskerOstatprotected
CanBeDeleted(void) const THROWS_NONECObjectinline
CDebugDumpable(void)CDebugDumpableinline
CheckReferenceOverflow(TCount count) constCObjectprivate
CObject(void)CObject
CObject(const CObject &src)CObject
count_mapCSeqMaskerOstatprotected
countsCSeqMaskerOstatOptprivate
createCacheBitArray(Uint4 **cba)CSeqMaskerOstatOptprivate
CSeqMaskerOstat(CNcbiOstream &os, bool alloc, string const &metadata)CSeqMaskerOstatexplicit
CSeqMaskerOstat(const CSeqMaskerOstat &)CSeqMaskerOstatprivate
CSeqMaskerOstatOpt(CNcbiOstream &os, Uint2 sz, bool alloc, string const &metadata)CSeqMaskerOstatOptexplicit
CSeqMaskerOstatOptAscii(const string &name, Uint2 sz, string const &metadata)CSeqMaskerOstatOptAsciiexplicit
CSeqMaskerOstatOptAscii(CNcbiOstream &os, Uint2 sz, string const &metadata)CSeqMaskerOstatOptAsciiexplicit
DebugDump(CDebugDumpContext ddc, unsigned int depth) constCObjectvirtual
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) constCDebugDumpable
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) constCDebugDumpable
DeleteThis(void)CObjectprotectedvirtual
DoDeleteThisObject(void)CObjectvirtual
doFinalize()CSeqMaskerOstatOptprotectedvirtual
DoNotDeleteThisObject(void)CObjectvirtual
doSetComment(const string &)CSeqMaskerOstatinlineprotectedvirtual
doSetParam(const string &, Uint4)CSeqMaskerOstatprotectedvirtual
doSetUnitCount(Uint4 unit, Uint4 count)CSeqMaskerOstatOptprotectedvirtual
doSetUnitSize(Uint4 us)CSeqMaskerOstatOptprotectedvirtual
DumpToConsole(void) constCDebugDumpable
EAllocFillMode enum nameCObject
eAllocFillNone enum valueCObject
eAllocFillPattern enum valueCObject
eAllocFillZero enum valueCObject
eCounterBitsCanBeDeletedCObjectstatic
eCounterBitsInPlainHeapCObjectstatic
eCounterBitsPlaceMaskCObjectstatic
eCounterStateMaskCObjectstatic
eCounterStepCObjectstatic
eCounterValidCObjectstatic
EnableDebugDump(bool on)CDebugDumpablestatic
final enum valueCSeqMaskerOstatprivate
finalize()CSeqMaskerOstat
findBestRoff(Uint1 k, Uint1 &max_coll, Uint4 &M, Uint4 *ht)CSeqMaskerOstatOptprivate
fmt_gen_algo_verCSeqMaskerOstatprotected
FormatMetaData() constCSeqMaskerOstatprotected
FormatParameters() constCSeqMaskerOstatprotected
FormatVersionCSeqMaskerOstatOptAsciistatic
GetAllocFillMode(void)CObjectstatic
GetParams() constCSeqMaskerOstatOptprotected
GetStatFmtVersion() constCSeqMaskerOstatOptAsciiinlinevirtual
InitCounter(void)CObjectinlineprivate
InvalidObject(void) constCObjectprivate
IsAllocatedInPool(void) const THROWS_NONECObjectinline
m_CounterCObjectmutableprivate
max_countCSeqMaskerOstatprotected
metadataCSeqMaskerOstatprotected
ObjectStateCanBeDeleted(TCount count)CObjectinlineprivatestatic
ObjectStateIsAllocatedInPool(TCount count)CObjectinlineprivatestatic
ObjectStateReferenced(TCount count)CObjectinlineprivatestatic
ObjectStateReferencedOnlyOnce(TCount count)CObjectinlineprivatestatic
ObjectStateUnreferenced(TCount count)CObjectinlineprivatestatic
ObjectStateValid(TCount count)CObjectinlineprivatestatic
operator delete(void *ptr)CObject
operator delete(void *ptr, void *place)CObject
operator delete(void *ptr, CObjectMemoryPool *place)CObject
operator delete[](void *ptr)CObject
operator new(size_t size)CObject
operator new(size_t size, void *place)CObject
operator new(size_t size, CObjectMemoryPool *place)CObject
operator new[](size_t size)CObject
operator=(const CSeqMaskerOstat &)CSeqMaskerOstatprivate
CObject::operator=(const CObject &src) THROWS_NONECObjectinline
out_streamCSeqMaskerOstatprotected
PARAMSCSeqMaskerOstatprotectedstatic
pvaluesCSeqMaskerOstatprotected
Referenced(void) const THROWS_NONECObjectinline
ReferencedOnlyOnce(void) const THROWS_NONECObjectinline
ReleaseReference(void) constCObject
RemoveLastReference(TCount count) constCObjectprivate
RemoveReference(void) constCObjectinline
SetAllocFillMode(EAllocFillMode mode)CObjectstatic
SetAllocFillMode(const string &value)CObjectstatic
setComment(const string &msg)CSeqMaskerOstatinline
SetCount(Uint4 count, double pct)CSeqMaskerOstatinline
SetMaxCount(Uint4 mc)CSeqMaskerOstatinline
setParam(const string &name, Uint4 value)CSeqMaskerOstat
SetStatAlgoVersion(CSeqMaskerVersion const &v)CSeqMaskerOstatinline
setUnitCount(Uint4 unit, Uint4 count)CSeqMaskerOstat
setUnitSize(Uint1 us)CSeqMaskerOstat
size_requestedCSeqMaskerOstatOptprivate
sm_DumpEnabledCDebugDumpableprivatestatic
start enum valueCSeqMaskerOstatprivate
STAT_ALGO_COMPONENT_NAMECSeqMaskerOstatstatic
StatAlgoVersionCSeqMaskerOstatstatic
stateCSeqMaskerOstatprivate
TCount typedefCObject
TCounter typedefCObject
thres enum valueCSeqMaskerOstatprivate
ThrowNullPointerException(void)CObjectstatic
ThrowNullPointerException(const type_info &type)CObjectstatic
TLockerType typedefCObject
udata enum valueCSeqMaskerOstatprivate
ulen enum valueCSeqMaskerOstatprivate
unit_bit_sizeCSeqMaskerOstatOptprivate
unit_sizeCSeqMaskerOstatprotected
unitsCSeqMaskerOstatOptprivate
UnitSize() constCSeqMaskerOstatOptprotected
write_out(const params &p) constCSeqMaskerOstatOptAsciiprotectedvirtual
WriteBinMetaData(std::ostream &os) constCSeqMaskerOstatprotected
~CDebugDumpable(void)CDebugDumpablevirtual
~CObject(void)CObjectvirtual
~CSeqMaskerOstat()CSeqMaskerOstatinlinevirtual
~CSeqMaskerOstatOpt()CSeqMaskerOstatOptinlinevirtual
~CSeqMaskerOstatOptAscii()CSeqMaskerOstatOptAsciiinlinevirtual
Modified on Fri Sep 20 14:57:02 2024 by modify_doxy.py rev. 669887