Represents ASN.1 type SeqTable-column defined in file seqtable.asn

Search Toolkit Book for CSeqTable_column

#include <objects/seqtable/SeqTable_column.hpp>

Inheritance diagram for CSeqTable_column:

Collaboration diagram for CSeqTable_column:

Public Member Functions
	CSeqTable_column (void)

	~CSeqTable_column (void)

bool	IsSet (size_t row) const

template<class Value >
bool	TryGetValue (size_t row, Value &v) const

bool	TryGetBool (size_t row, bool &v) const

bool	TryGetInt (size_t row, int &v) const

bool	TryGetReal (size_t row, double &v) const

const string *	GetStringPtr (size_t row) const

const vector< char > *	GetBytesPtr (size_t row) const

CConstRef< CSeq_id >	GetSeq_id (size_t row) const

CConstRef< CSeq_loc >	GetSeq_loc (size_t row) const

CConstRef< CSeq_interval >	GetSeq_int (size_t row) const

Public Member Functions inherited from CSeqTable_column_Base
	CSeqTable_column_Base (void)

virtual	~CSeqTable_column_Base (void)

	DECLARE_INTERNAL_TYPE_INFO ()

bool	IsSetHeader (void) const
	column description or reference to previously defined info information about data Check if a value has been assigned to Header data member. More...

bool	CanGetHeader (void) const
	Check if it is safe to call GetHeader method. More...

void	ResetHeader (void)
	Reset Header data member. More...

const THeader &	GetHeader (void) const
	Get the Header member data. More...

void	SetHeader (THeader &value)
	Assign a value to Header data member. More...

THeader &	SetHeader (void)
	Assign a value to Header data member. More...

bool	IsSetData (void) const
	row data Check if a value has been assigned to Data data member. More...

bool	CanGetData (void) const
	Check if it is safe to call GetData method. More...

void	ResetData (void)
	Reset Data data member. More...

const TData &	GetData (void) const
	Get the Data member data. More...

void	SetData (TData &value)
	Assign a value to Data data member. More...

TData &	SetData (void)
	Assign a value to Data data member. More...

bool	IsSetSparse (void) const
	in case not all rows contain data this field will contain sparse info Check if a value has been assigned to Sparse data member. More...

bool	CanGetSparse (void) const
	Check if it is safe to call GetSparse method. More...

void	ResetSparse (void)
	Reset Sparse data member. More...

const TSparse &	GetSparse (void) const
	Get the Sparse member data. More...

void	SetSparse (TSparse &value)
	Assign a value to Sparse data member. More...

TSparse &	SetSparse (void)
	Assign a value to Sparse data member. More...

bool	IsSetDefault (void) const
	default value for sparse table, or if row data is too short Check if a value has been assigned to Default data member. More...

bool	CanGetDefault (void) const
	Check if it is safe to call GetDefault method. More...

void	ResetDefault (void)
	Reset Default data member. More...

const TDefault &	GetDefault (void) const
	Get the Default member data. More...

void	SetDefault (TDefault &value)
	Assign a value to Default data member. More...

TDefault &	SetDefault (void)
	Assign a value to Default data member. More...

bool	IsSetSparse_other (void) const
	single value for indexes not listed in sparse table Check if a value has been assigned to Sparse_other data member. More...

bool	CanGetSparse_other (void) const
	Check if it is safe to call GetSparse_other method. More...

void	ResetSparse_other (void)
	Reset Sparse_other data member. More...

const TSparse_other &	GetSparse_other (void) const
	Get the Sparse_other member data. More...

void	SetSparse_other (TSparse_other &value)
	Assign a value to Sparse_other data member. More...

TSparse_other &	SetSparse_other (void)
	Assign a value to Sparse_other data member. More...

virtual void	Reset (void)
	Reset the whole object. More...

Public Member Functions inherited from CSerialObject
	CSerialObject (void)

virtual	~CSerialObject (void)

virtual const CTypeInfo *	GetThisTypeInfo (void) const =0

virtual void	Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
	Set object to copy of another one. More...

virtual bool	Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
	Check if both objects contain the same values. More...

virtual void	DebugDump (CDebugDumpContext ddc, unsigned int depth) const
	Define method for dumping debug information. More...

void	ThrowUnassigned (TMemberIndex index) const

void	ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const

bool	HasNamespaceName (void) const
	Check if object data type has namespace name. More...

const string &	GetNamespaceName (void) const
	Get namespace name. More...

bool	HasNamespacePrefix (void) const
	Check if data type has namespace prefix. More...

const string &	GetNamespacePrefix (void) const
	Get namespace prefix. More...

Public Member Functions inherited from CObject
	CObject (void)
	Constructor. More...

	CObject (const CObject &src)
	Copy constructor. More...

virtual	~CObject (void)
	Destructor. More...

CObject &	operator= (const CObject &src) THROWS_NONE
	Assignment operator. More...

bool	CanBeDeleted (void) const THROWS_NONE
	Check if object can be deleted. More...

bool	IsAllocatedInPool (void) const THROWS_NONE
	Check if object is allocated in memory pool (not system heap) More...

bool	Referenced (void) const THROWS_NONE
	Check if object is referenced. More...

bool	ReferencedOnlyOnce (void) const THROWS_NONE
	Check if object is referenced only once. More...

void	AddReference (void) const
	Add reference to object. More...

void	RemoveReference (void) const
	Remove reference to object. More...

void	ReleaseReference (void) const
	Remove reference without deleting object. More...

virtual void	DoNotDeleteThisObject (void)
	Mark this object as not allocated in heap – do not delete this object. More...

virtual void	DoDeleteThisObject (void)
	Mark this object as allocated in heap – object can be deleted. More...

void *	operator new (size_t size)
	Define new operator for memory allocation. More...

void *	operator new[] (size_t size)
	Define new[] operator for 'array' memory allocation. More...

void	operator delete (void *ptr)
	Define delete operator for memory deallocation. More...

void	operator delete[] (void *ptr)
	Define delete[] operator for memory deallocation. More...

void *	operator new (size_t size, void *place)
	Define new operator. More...

void	operator delete (void ptr, void place)
	Define delete operator. More...

void *	operator new (size_t size, CObjectMemoryPool *place)
	Define new operator using memory pool. More...

void	operator delete (void ptr, CObjectMemoryPool place)
	Define delete operator. More...

Public Member Functions inherited from CDebugDumpable
	CDebugDumpable (void)

virtual	~CDebugDumpable (void)

void	DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const

void	DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const

void	DumpToConsole (void) const

Private Types
typedef CSeqTable_column_Base	Tparent

Private Member Functions
	CSeqTable_column (const CSeqTable_column &value)

CSeqTable_column &	operator= (const CSeqTable_column &value)

Additional Inherited Members
Public Types inherited from CSeqTable_column_Base
enum class	E_memberIndex { e__allMandatory = 0 , e_header , e_data , e_sparse , e_default , e_sparse_other }

typedef CSeqTable_column_info	THeader

typedef CSeqTable_multi_data	TData

typedef CSeqTable_sparse_index	TSparse

typedef CSeqTable_single_data	TDefault

typedef CSeqTable_single_data	TSparse_other

typedef Tparent::CMemberIndex< E_memberIndex, 6 >	TmemberIndex

Public Types inherited from CObject
enum	EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
	Control filling of newly allocated memory. More...

typedef CObjectCounterLocker	TLockerType
	Default locker type for CRef. More...

typedef atomic< Uint8 >	TCounter
	Counter type is CAtomiCounter. More...

typedef Uint8	TCount
	Alias for value type of counter. More...

Static Public Member Functions inherited from CSerialObject
static void	SetVerifyDataThread (ESerialVerifyData verify)

static void	SetVerifyDataGlobal (ESerialVerifyData verify)

static string	UnassignedString (void)

static CStringUTF8	UnassignedStringUTF8 (void)

static char	UnassignedByte (void)

Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (void)
	Define method to throw null pointer exception. More...

static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (const type_info &type)

static EAllocFillMode	GetAllocFillMode (void)

static void	SetAllocFillMode (EAllocFillMode mode)

static void	SetAllocFillMode (const string &value)
	Set mode from configuration parameter value. More...

Static Public Member Functions inherited from CDebugDumpable
static void	EnableDebugDump (bool on)

Static Public Attributes inherited from CSerialObject
static const char *	ms_UnassignedStr = "<unassigned>"

static const char	ms_UnassignedByte = char(0xcd)

Static Public Attributes inherited from CObject
static const TCount	eCounterBitsCanBeDeleted = 1 << 0
	Define possible object states. More...

static const TCount	eCounterBitsInPlainHeap = 1 << 1
	Heap signature was found. More...

static const TCount	eCounterBitsPlaceMask
	Mask for 'in heap' state flags. More...

static const int	eCounterStep = 1 << 2
	Skip over the "in heap" bits. More...

static const TCount	eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
	Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...

static const TCount	eCounterStateMask
	Valid object, and object in heap. More...

Protected Member Functions inherited from CObject
virtual void	DeleteThis (void)
	Virtual method "deleting" this object. More...