Search Toolkit Book for CSeq_annot_Handle

#include <objmgr/seq_annot_handle.hpp>

Inheritance diagram for CSeq_annot_Handle:

Collaboration diagram for CSeq_annot_Handle:

Public Types
typedef CSeq_annot	TObject
	Unified interface for templates. More...

Public Member Functions
	CSeq_annot_Handle (void)

	DECLARE_OPERATOR_BOOL (m_Info.IsValid())

bool	IsRemoved (void) const

const CTSE_Handle &	GetTSE_Handle (void) const

void	Reset (void)

bool	operator== (const CSeq_annot_Handle &annot) const
	Check if handles point to the same seq-annot. More...

bool	operator!= (const CSeq_annot_Handle &annot) const

bool	operator< (const CSeq_annot_Handle &annot) const
	For usage in containers. More...

bool	OrderedBefore (const CSeq_annot_Handle &annot) const
	More stable comparison - takes loading order in account. More...

CScope &	GetScope (void) const
	Get scope this handle belongs to. More...

CConstRef< CSeq_annot >	GetCompleteSeq_annot (void) const
	Complete and return const reference to the current seq-annot. More...

CConstRef< CSeq_annot >	GetSeq_annotCore (void) const

CConstRef< TObject >	GetCompleteObject (void) const

CConstRef< TObject >	GetObjectCore (void) const

CSeq_entry_Handle	GetParentEntry (void) const
	Get parent Seq-entry handle. More...

CSeq_entry_Handle	GetTopLevelEntry (void) const
	Get top level Seq-entry handle. More...

CSeq_annot_EditHandle	GetEditHandle (void) const
	Get 'edit' version of handle. More...

bool	IsNamed (void) const

const string &	GetName (void) const

CSeq_annot::C_Data::E_Choice	Which (void) const

bool	IsFtable (void) const

bool	IsAlign (void) const

bool	IsGraph (void) const

bool	IsIds (void) const

bool	IsLocs (void) const

bool	IsSeq_table (void) const

size_t	GetSeq_tableNumRows (void) const

bool	Seq_annot_IsSetId (void) const

bool	Seq_annot_CanGetId (void) const

const CSeq_annot::TId &	Seq_annot_GetId (void) const

bool	Seq_annot_IsSetDb (void) const

bool	Seq_annot_CanGetDb (void) const

CSeq_annot::TDb	Seq_annot_GetDb (void) const

bool	Seq_annot_IsSetName (void) const

bool	Seq_annot_CanGetName (void) const

const CSeq_annot::TName &	Seq_annot_GetName (void) const

bool	Seq_annot_IsSetDesc (void) const

bool	Seq_annot_CanGetDesc (void) const

const CSeq_annot::TDesc &	Seq_annot_GetDesc (void) const

void	Swap (CSeq_annot_Handle &annot)

const TScopeInfo &	x_GetScopeInfo (void) const

const CSeq_annot_Info &	x_GetInfo (void) const

const CSeq_annot &	x_GetSeq_annotCore (void) const

CScope_Impl &	x_GetScopeImpl (void) const

Protected Types
typedef CSeq_annot_ScopeInfo	TScopeInfo

Protected Member Functions
	CSeq_annot_Handle (const CSeq_annot_Info &annot, const CTSE_Handle &tse)

void	x_Set (const CSeq_annot_Info &annot, const CTSE_Handle &tse)

Protected Attributes
CScopeInfo_Ref< TScopeInfo >	m_Info

Friends
class	CScope_Impl

class	CSeq_annot_CI

class	CAnnot_Collector

class	CMappedFeat

class	CAnnotObject_Ref

Detailed Description

CSeq_annot_Handle –.

Proxy to access seq-annot objects

Definition at line 100 of file seq_annot_handle.hpp.

The documentation for this class was generated from the following files:

include/objmgr/seq_annot_handle.hpp
src/objmgr/seq_annot_handle.cpp

Public Types

Public Member Functions

Protected Types

Protected Member Functions

Protected Attributes

Friends

Detailed Description