AddReference(void) const | CObject | inline |
AddToBioSource(objects::CBioSource &src, const string &newValue, objects::edit::EExistingText existing_text) | CSrcTablePrimerColumn | virtual |
CSrcTableColumnBase::AddToBioSource(objects::CBioSource &in_out_bioSource, const string &newValue) | CSrcTableColumnBase | inlinevirtual |
AllowMultipleValues() | CSrcTablePrimerColumn | inlinevirtual |
CanBeDeleted(void) const THROWS_NONE | CObject | inline |
CDebugDumpable(void) | CDebugDumpable | inline |
CheckReferenceOverflow(TCount count) const | CObject | private |
ClearInBioSource(objects::CBioSource &src) | CSrcTablePrimerColumn | virtual |
ClearVal(CObject &object) | CSrcTableColumnBase | |
CObject(void) | CObject | |
CObject(const CObject &src) | CObject | |
CSrcTablePrimerColumn(EPrimerColType col_type) | CSrcTablePrimerColumn | inline |
DebugDump(CDebugDumpContext ddc, unsigned int depth) const | CObject | virtual |
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DeleteThis(void) | CObject | protectedvirtual |
DoDeleteThisObject(void) | CObject | virtual |
DoNotDeleteThisObject(void) | CObject | virtual |
DumpToConsole(void) const | CDebugDumpable | |
EAllocFillMode enum name | CObject | |
eAllocFillNone enum value | CObject | |
eAllocFillPattern enum value | CObject | |
eAllocFillZero enum value | CObject | |
eCounterBitsCanBeDeleted | CObject | static |
eCounterBitsInPlainHeap | CObject | static |
eCounterBitsPlaceMask | CObject | static |
eCounterStateMask | CObject | static |
eCounterStep | CObject | static |
eCounterValid | CObject | static |
eDescriptor enum value | CSrcTableColumnBase | |
eFeature enum value | CSrcTableColumnBase | |
eFwdName enum value | CSrcTablePrimerColumn | |
eFwdSeq enum value | CSrcTablePrimerColumn | |
EnableDebugDump(bool on) | CDebugDumpable | static |
eNotPrimerCol enum value | CSrcTablePrimerColumn | |
eNotSet enum value | CSrcTableColumnBase | |
EPrimerColType enum name | CSrcTablePrimerColumn | |
eRevName enum value | CSrcTablePrimerColumn | |
eRevSeq enum value | CSrcTablePrimerColumn | |
ESourceType enum name | CSrcTableColumnBase | |
GetAllocFillMode(void) | CObject | static |
GetApplyObjects(CBioseq_Handle bsh) | CSrcTableColumnBase | |
GetFromBioSource(const objects::CBioSource &src) const | CSrcTablePrimerColumn | virtual |
GetLabel() const | CSrcTableColumnBase | inlinevirtual |
GetLabel() const | CSrcTableColumnBase | inlinevirtual |
GetObjects(CBioseq_Handle bsh) | CSrcTableColumnBase | |
GetPrimerColumnType(const string &field_name) | CSrcTablePrimerColumn | static |
GetVal(const CObject &object) | CSrcTableColumnBase | |
GetVals(const CObject &object) | CSrcTableColumnBase | |
GetValsFromBioSource(const CBioSource &src) const | CSrcTablePrimerColumn | virtual |
CSrcTableColumnBase::GetValsFromBioSource(const objects::CBioSource &src) const | CSrcTableColumnBase | virtual |
InitCounter(void) | CObject | inlineprivate |
InvalidObject(void) const | CObject | private |
IsAllocatedInPool(void) const THROWS_NONE | CObject | inline |
IsValid(const vector< string > &values) | CSrcTableColumnBase | inlinevirtual |
m_ColType | CSrcTablePrimerColumn | protected |
m_ConstraintCol | CSrcTablePrimerColumn | protected |
m_Counter | CObject | mutableprivate |
m_StringConstraint | CSrcTablePrimerColumn | protected |
m_Type | CSrcTableColumnBase | private |
ObjectStateCanBeDeleted(TCount count) | CObject | inlineprivatestatic |
ObjectStateIsAllocatedInPool(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferencedOnlyOnce(TCount count) | CObject | inlineprivatestatic |
ObjectStateUnreferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateValid(TCount count) | CObject | inlineprivatestatic |
operator delete(void *ptr) | CObject | |
operator delete(void *ptr, void *place) | CObject | |
operator delete(void *ptr, CObjectMemoryPool *place) | CObject | |
operator delete[](void *ptr) | CObject | |
operator new(size_t size) | CObject | |
operator new(size_t size, void *place) | CObject | |
operator new(size_t size, CObjectMemoryPool *place) | CObject | |
operator new[](size_t size) | CObject | |
operator=(const CObject &src) THROWS_NONE | CObject | inline |
Referenced(void) const THROWS_NONE | CObject | inline |
ReferencedOnlyOnce(void) const THROWS_NONE | CObject | inline |
ReleaseReference(void) const | CObject | |
RemoveLastReference(TCount count) const | CObject | private |
RemoveReference(void) const | CObject | inline |
SetAllocFillMode(EAllocFillMode mode) | CObject | static |
SetAllocFillMode(const string &value) | CObject | static |
SetConstraint(const string &field_name, CConstRef< edit::CStringConstraint > string_constraint) | CSrcTablePrimerColumn | virtual |
SetSourceType(ESourceType type) | CSrcTableColumnBase | inline |
sm_DumpEnabled | CDebugDumpable | privatestatic |
TCount typedef | CObject | |
TCounter typedef | CObject | |
ThrowNullPointerException(void) | CObject | static |
ThrowNullPointerException(const type_info &type) | CObject | static |
TLockerType typedef | CObject | |
x_AddFieldToPrimerSet(const string &val, CPCRPrimerSet &set) | CSrcTablePrimerColumn | protected |
x_ApplyStringToPrimerSet(const string &val, CPCRPrimerSet &set, objects::edit::EExistingText existing_text) | CSrcTablePrimerColumn | protected |
x_ApplyStringToReaction(const string &val, CPCRReaction &reaction, objects::edit::EExistingText existing_text) | CSrcTablePrimerColumn | protected |
x_ApplyStringToSrc(const string &val, CBioSource &src, objects::edit::EExistingText existing_text) | CSrcTablePrimerColumn | protected |
x_DoesPrimerSetHaveSpace(const CPCRPrimerSet &set) | CSrcTablePrimerColumn | protected |
x_DoesReactionHaveSpace(const CPCRReaction &reaction) | CSrcTablePrimerColumn | protected |
x_DoesReactionMatchConstraint(const CPCRReaction &reaction) const | CSrcTablePrimerColumn | protected |
x_GetValues(EPrimerColType col, const CBioSource &src) const | CSrcTablePrimerColumn | protected |
x_GetValues(EPrimerColType col, const CPCRReaction &reaction) const | CSrcTablePrimerColumn | protected |
x_GetValues(EPrimerColType col, const CPCRPrimerSet &set) const | CSrcTablePrimerColumn | protected |
x_RemoveEmptyValues(CBioSource &src) | CSrcTablePrimerColumn | protected |
x_RemoveEmptyValues(CPCRReaction &reaction) | CSrcTablePrimerColumn | protected |
x_RemoveEmptyValues(CPCRPrimerSet &set) | CSrcTablePrimerColumn | protected |
~CDebugDumpable(void) | CDebugDumpable | virtual |
~CObject(void) | CObject | virtual |