NCBI C++ ToolKit
CTSE_Chunk_Info Member List

This is the complete list of members for CTSE_Chunk_Info, including all inherited members.

AddReference(void) constCObjectinline
CanBeDeleted(void) const THROWS_NONECObjectinline
CDebugDumpable(void)CDebugDumpableinline
CheckReferenceOverflow(TCount count) constCObjectprivate
CObject(void)CObject
CObject(const CObject &src)CObject
ContainsBioseq(const CSeq_id_Handle &id) constCTSE_Chunk_Infoprotected
CTSE_Chunk_Info(TChunkId id)CTSE_Chunk_Info
CTSE_Chunk_Info(const CTSE_Chunk_Info &)CTSE_Chunk_Infoprivate
CTSE_Default_Assigner classCTSE_Chunk_Infofriend
CTSE_Info classCTSE_Chunk_Infofriend
CTSE_Split_Info classCTSE_Chunk_Infofriend
DebugDump(CDebugDumpContext ddc, unsigned int depth) constCObjectvirtual
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) constCDebugDumpable
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) constCDebugDumpable
DeleteThis(void)CObjectprotectedvirtual
DoDeleteThisObject(void)CObjectvirtual
DoNotDeleteThisObject(void)CObjectvirtual
DumpToConsole(void) constCDebugDumpable
EAllocFillMode enum nameCObject
eAllocFillNone enum valueCObject
eAllocFillPattern enum valueCObject
eAllocFillZero enum valueCObject
eCounterBitsCanBeDeletedCObjectstatic
eCounterBitsInPlainHeapCObjectstatic
eCounterBitsPlaceMaskCObjectstatic
eCounterStateMaskCObjectstatic
eCounterStepCObjectstatic
eCounterValidCObjectstatic
EnableDebugDump(bool on)CDebugDumpablestatic
GetAllocFillMode(void)CObjectstatic
GetAnnotContents(void) constCTSE_Chunk_Infoinline
GetAnnotPlaces(void) constCTSE_Chunk_Infoinline
GetAssemblyInfos(void) constCTSE_Chunk_Infoinline
GetBioseqIds(void) constCTSE_Chunk_Infoinline
GetBioseqPlaces(void) constCTSE_Chunk_Infoinline
GetBioseqsIds(TBioseqIds &ids) constCTSE_Chunk_Infoprotected
GetBlobId(void) constCTSE_Chunk_Info
GetBlobVersion(void) constCTSE_Chunk_Info
GetChunkId(void) constCTSE_Chunk_Infoinline
GetDescInfos(void) constCTSE_Chunk_Infoinline
GetLoadBytes() constCTSE_Chunk_Infoinline
GetLoadCost() constCTSE_Chunk_Info
GetLoadInitGuard(void)CTSE_Chunk_Info
GetLoadSeconds() constCTSE_Chunk_Infoinline
GetSeq_dataInfos(void) constCTSE_Chunk_Infoinline
GetSplitInfo(void) constCTSE_Chunk_Infoinline
InitCounter(void)CObjectinlineprivate
InvalidObject(void) constCObjectprivate
IsAllocatedInPool(void) const THROWS_NONECObjectinline
IsLoaded(void) constCTSE_Chunk_Infoinline
kDelayedMain_ChunkId enum valueCTSE_Chunk_Info
kMain_ChunkId enum valueCTSE_Chunk_Info
kMasterWGS_ChunkId enum valueCTSE_Chunk_Info
Load(void) constCTSE_Chunk_Info
m_AnnotContentsCTSE_Chunk_Infoprivate
m_AnnotPlacesCTSE_Chunk_Infoprivate
m_AssemblyInfosCTSE_Chunk_Infoprivate
m_BioseqIdsCTSE_Chunk_Infoprivate
m_BioseqPlacesCTSE_Chunk_Infoprivate
m_ChunkIdCTSE_Chunk_Infoprivate
m_CounterCObjectmutableprivate
m_DescInfosCTSE_Chunk_Infoprivate
m_ExplicitFeatIdsCTSE_Chunk_Infoprivate
m_FeatIdsCTSE_Chunk_Infoprivate
m_ListenerMutexCTSE_Chunk_Infoprivate
m_LoadBytesCTSE_Chunk_Infoprivate
m_LoadListenerCTSE_Chunk_Infoprivate
m_LoadLockCTSE_Chunk_Infoprivate
m_LoadSecondsCTSE_Chunk_Infoprivate
m_ObjectIndexListCTSE_Chunk_Infoprivate
m_Seq_dataCTSE_Chunk_Infoprivate
m_SplitInfoCTSE_Chunk_Infoprivate
m_XrefIdsCTSE_Chunk_Infoprivate
NotLoaded(void) constCTSE_Chunk_Infoinline
ObjectStateCanBeDeleted(TCount count)CObjectinlineprivatestatic
ObjectStateIsAllocatedInPool(TCount count)CObjectinlineprivatestatic
ObjectStateReferenced(TCount count)CObjectinlineprivatestatic
ObjectStateReferencedOnlyOnce(TCount count)CObjectinlineprivatestatic
ObjectStateUnreferenced(TCount count)CObjectinlineprivatestatic
ObjectStateValid(TCount count)CObjectinlineprivatestatic
operator CInitMutex_Base &(void)CTSE_Chunk_Infoinline
operator delete(void *ptr)CObject
operator delete(void *ptr, void *place)CObject
operator delete(void *ptr, CObjectMemoryPool *place)CObject
operator delete[](void *ptr)CObject
operator new(size_t size)CObject
operator new(size_t size, void *place)CObject
operator new(size_t size, CObjectMemoryPool *place)CObject
operator new[](size_t size)CObject
operator=(const CTSE_Chunk_Info &)CTSE_Chunk_Infoprivate
CObject::operator=(const CObject &src) THROWS_NONECObjectinline
Referenced(void) const THROWS_NONECObjectinline
ReferencedOnlyOnce(void) const THROWS_NONECObjectinline
ReleaseReference(void) constCObject
RemoveLastReference(TCount count) constCObjectprivate
RemoveReference(void) constCObjectinline
SetAllocFillMode(EAllocFillMode mode)CObjectstatic
SetAllocFillMode(const string &value)CObjectstatic
SetLoaded(CObject *obj=0)CTSE_Chunk_Info
SetLoadListener(CRef< CTSEChunkLoadListener > listener)CTSE_Chunk_Info
sm_DumpEnabledCDebugDumpableprivatestatic
TAnnotContents typedefCTSE_Chunk_Info
TAnnotTypes typedefCTSE_Chunk_Info
TAssembly typedefCTSE_Chunk_Info
TAssemblyInfo typedefCTSE_Chunk_Info
TAssemblyInfos typedefCTSE_Chunk_Info
TBioseq_setId typedefCTSE_Chunk_Info
TBioseqId typedefCTSE_Chunk_Info
TBioseqIds typedefCTSE_Chunk_Info
TBioseqPlaces typedefCTSE_Chunk_Info
TBlobId typedefCTSE_Chunk_Info
TBlobVersion typedefCTSE_Chunk_Info
TChunkId typedefCTSE_Chunk_Info
TCount typedefCObject
TCounter typedefCObject
TDescInfo typedefCTSE_Chunk_Info
TDescInfos typedefCTSE_Chunk_Info
TDescTypeMask typedefCTSE_Chunk_Info
TFeatIdInt typedefCTSE_Chunk_Info
TFeatIdIntList typedefCTSE_Chunk_Info
TFeatIdsMap typedefCTSE_Chunk_Info
TFeatIdStr typedefCTSE_Chunk_Info
TFeatIdStrList typedefCTSE_Chunk_Info
ThrowNullPointerException(void)CObjectstatic
ThrowNullPointerException(const type_info &type)CObjectstatic
TLocation typedefCTSE_Chunk_Info
TLocationId typedefCTSE_Chunk_Info
TLocationRange typedefCTSE_Chunk_Info
TLocationSet typedefCTSE_Chunk_Info
TLockerType typedefCObject
TObjectIndex typedefCTSE_Chunk_Info
TObjectIndexList typedefCTSE_Chunk_Info
TPlace typedefCTSE_Chunk_Info
TPlaces typedefCTSE_Chunk_Info
TSequence typedefCTSE_Chunk_Info
x_AddAnnotPlace(const TBioseqId &id)CTSE_Chunk_Info
x_AddAnnotPlace(TBioseq_setId id)CTSE_Chunk_Info
x_AddAnnotPlace(const TPlace &place)CTSE_Chunk_Info
x_AddAnnotType(const CAnnotName &annot_name, const SAnnotTypeSelector &annot_type, const TLocationId &location_id)CTSE_Chunk_Info
x_AddAnnotType(const CAnnotName &annot_name, const SAnnotTypeSelector &annot_type, const TLocationId &location_id, const TLocationRange &location_range)CTSE_Chunk_Info
x_AddAnnotType(const CAnnotName &annot_name, const SAnnotTypeSelector &annot_type, const TLocationSet &location)CTSE_Chunk_Info
x_AddAssemblyInfo(const TBioseqId &id)CTSE_Chunk_Info
x_AddBioseqId(const TBioseqId &id)CTSE_Chunk_Info
x_AddBioseqPlace(TBioseq_setId id)CTSE_Chunk_Info
x_AddDescInfo(TDescTypeMask type_mask, const TBioseqId &id)CTSE_Chunk_Info
x_AddDescInfo(TDescTypeMask type_mask, TBioseq_setId id)CTSE_Chunk_Info
x_AddDescInfo(const TDescInfo &info)CTSE_Chunk_Info
x_AddFeat_ids(void)CTSE_Chunk_Info
x_AddFeat_ids(const SAnnotTypeSelector &type, const TFeatIdIntList &ids)CTSE_Chunk_Info
x_AddFeat_ids(const SAnnotTypeSelector &type, const TFeatIdStrList &ids)CTSE_Chunk_Info
x_AddSeq_data(const TLocationSet &location)CTSE_Chunk_Info
x_AddUsedMemory(size_t size)CTSE_Chunk_Info
x_AddXref_ids(const SAnnotTypeSelector &type, const TFeatIdIntList &ids)CTSE_Chunk_Info
x_AddXref_ids(const SAnnotTypeSelector &type, const TFeatIdStrList &ids)CTSE_Chunk_Info
x_AnnotIndexNeedsUpdate() constCTSE_Chunk_Infoinlineprotected
x_Attached(void) constCTSE_Chunk_Infoprotected
x_ContainsFeatIds(CSeqFeatData::E_Choice type, EFeatIdType id_type) constCTSE_Chunk_Infoprotected
x_ContainsFeatIds(CSeqFeatData::ESubtype subtype, EFeatIdType id_type) constCTSE_Chunk_Infoprotected
x_ContainsFeatType(CSeqFeatData::E_Choice type) constCTSE_Chunk_Infoprotected
x_ContainsFeatType(CSeqFeatData::ESubtype subtype) constCTSE_Chunk_Infoprotected
x_DropAnnotObjects(void)CTSE_Chunk_Infoprotected
x_GetRecords(const CSeq_id_Handle &id, bool bioseq) constCTSE_Chunk_Infoprotected
x_InitObjectIndexList(void)CTSE_Chunk_Infoprotected
x_LoadAnnot(const TPlace &place, const CSeq_annot &annot)CTSE_Chunk_Info
x_LoadAssembly(const TBioseqId &seq_id, const TAssembly &assembly)CTSE_Chunk_Info
x_LoadBioseq(const TPlace &place, const CBioseq &bioseq)CTSE_Chunk_Info
x_LoadBioseqs(const TPlace &place, const list< CRef< CBioseq > > &bioseqs)CTSE_Chunk_Info
x_LoadDescr(const TPlace &place, const CSeq_descr &descr)CTSE_Chunk_Info
x_LoadSeq_entry(CSeq_entry &entry, CTSE_SetObjectInfo *set_info=0)CTSE_Chunk_Info
x_LoadSequence(const TPlace &place, TSeqPos pos, const TSequence &seq)CTSE_Chunk_Info
x_SetLoadBytes(Uint4 bytes)CTSE_Chunk_Info
x_SetLoadSeconds(double seconds)CTSE_Chunk_Info
x_SplitAttach(CTSE_Split_Info &split_info)CTSE_Chunk_Infoprotected
x_TSEAttach(CTSE_Info &tse, ITSE_Assigner &tse_info)CTSE_Chunk_Infoprotected
x_UpdateAnnotIndex(CTSE_Info &tse)CTSE_Chunk_Infoprotected
x_UpdateAnnotIndexContents(CTSE_Info &tse)CTSE_Chunk_Infoprotected
~CDebugDumpable(void)CDebugDumpablevirtual
~CObject(void)CObjectvirtual
~CTSE_Chunk_Info(void)CTSE_Chunk_Infovirtual
Modified on Sat Feb 24 07:47:01 2024 by modify_doxy.py rev. 669887