Search Toolkit Book for CTranslationConfig

#include <gui/widgets/seq_graphic/translation_glyph.hpp>

Inheritance diagram for CTranslationConfig:

Collaboration diagram for CTranslationConfig:

Public Member Functions
	CTranslationConfig ()

void	SetStartCodonColor (const CRgbaColor &color)
	CTranslationConfig inline methods. More...

CRgbaColor &	GetStartCodonColor ()

const CRgbaColor &	GetStartCodonColor () const

void	SetStopCodonColor (const CRgbaColor &color)

CRgbaColor &	GetStopCodonColor ()

const CRgbaColor &	GetStopCodonColor () const

void	SetOrfHighlightColor (const CRgbaColor &color)

CRgbaColor &	GetOrfHighlightColor ()

const CRgbaColor &	GetOrfHighlightColor () const

void	SetSeqColor (const CRgbaColor &color)

CRgbaColor &	GetSeqColor ()

const CRgbaColor &	GetSeqColor () const

void	SetOrfSeqColor (const CRgbaColor &color)

CRgbaColor &	GetOrfSeqColor ()

const CRgbaColor &	GetOrfSeqColor () const

void	SetLabelBgColor (const CRgbaColor &color)

CRgbaColor &	GetLabelBgColor ()

const CRgbaColor &	GetLabelBgColor () const

void	SetCommentColor (const CRgbaColor &color)

CRgbaColor &	GetCommentColor ()

const CRgbaColor &	GetCommentColor () const

void	SetSeqFont (CGlTextureFont::EFontFace font, unsigned int font_size)

CGlTextureFont &	GetSeqFont ()

const CGlTextureFont &	GetSeqFont () const

void	SetStrandFont (CGlTextureFont::EFontFace font, unsigned int font_size)

CGlTextureFont &	GetStrandFont ()

const CGlTextureFont &	GetStrandFont () const

void	SetBarHeight (int h)

int	GetBarHeight () const

void	SetOrfThreshold (int val)

int	GetOrfThreshold () const

void	SetHighlightCodons (bool f)

bool	GetHighlightCodons () const

void	SetShowLabel (bool f)

bool	ShowLabel () const

Public Member Functions inherited from CObject
	CObject (void)
	Constructor. More...

	CObject (const CObject &src)
	Copy constructor. More...

virtual	~CObject (void)
	Destructor. More...

CObject &	operator= (const CObject &src) THROWS_NONE
	Assignment operator. More...

bool	CanBeDeleted (void) const THROWS_NONE
	Check if object can be deleted. More...

bool	IsAllocatedInPool (void) const THROWS_NONE
	Check if object is allocated in memory pool (not system heap) More...

bool	Referenced (void) const THROWS_NONE
	Check if object is referenced. More...

bool	ReferencedOnlyOnce (void) const THROWS_NONE
	Check if object is referenced only once. More...

void	AddReference (void) const
	Add reference to object. More...

void	RemoveReference (void) const
	Remove reference to object. More...

void	ReleaseReference (void) const
	Remove reference without deleting object. More...

virtual void	DoNotDeleteThisObject (void)
	Mark this object as not allocated in heap – do not delete this object. More...

virtual void	DoDeleteThisObject (void)
	Mark this object as allocated in heap – object can be deleted. More...

void *	operator new (size_t size)
	Define new operator for memory allocation. More...

void *	operator new[] (size_t size)
	Define new[] operator for 'array' memory allocation. More...

void	operator delete (void *ptr)
	Define delete operator for memory deallocation. More...

void	operator delete[] (void *ptr)
	Define delete[] operator for memory deallocation. More...

void *	operator new (size_t size, void *place)
	Define new operator. More...

void	operator delete (void ptr, void place)
	Define delete operator. More...

void *	operator new (size_t size, CObjectMemoryPool *place)
	Define new operator using memory pool. More...

void	operator delete (void ptr, CObjectMemoryPool place)
	Define delete operator. More...

virtual void	DebugDump (CDebugDumpContext ddc, unsigned int depth) const
	Define method for dumping debug information. More...

Public Member Functions inherited from CDebugDumpable
	CDebugDumpable (void)

virtual	~CDebugDumpable (void)

void	DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const

void	DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const

void	DumpToConsole (void) const

Additional Inherited Members
Public Types inherited from CObject
enum	EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
	Control filling of newly allocated memory. More...

typedef CObjectCounterLocker	TLockerType
	Default locker type for CRef. More...

typedef atomic< Uint8 >	TCounter
	Counter type is CAtomiCounter. More...

typedef Uint8	TCount
	Alias for value type of counter. More...

Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (void)
	Define method to throw null pointer exception. More...

static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (const type_info &type)

static EAllocFillMode	GetAllocFillMode (void)

static void	SetAllocFillMode (EAllocFillMode mode)

static void	SetAllocFillMode (const string &value)
	Set mode from configuration parameter value. More...

Static Public Member Functions inherited from CDebugDumpable
static void	EnableDebugDump (bool on)

Static Public Attributes inherited from CObject
static const TCount	eCounterBitsCanBeDeleted = 1 << 0
	Define possible object states. More...

static const TCount	eCounterBitsInPlainHeap = 1 << 1
	Heap signature was found. More...

static const TCount	eCounterBitsPlaceMask
	Mask for 'in heap' state flags. More...

static const int	eCounterStep = 1 << 2
	Skip over the "in heap" bits. More...

static const TCount	eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
	Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...

static const TCount	eCounterStateMask
	Valid object, and object in heap. More...

Protected Member Functions inherited from CObject
virtual void	DeleteThis (void)
	Virtual method "deleting" this object. More...

Detailed Description

Definition at line 119 of file translation_glyph.hpp.

Constructor & Destructor Documentation

◆ CTranslationConfig()

CTranslationConfig::CTranslationConfig ( )

inline

Definition at line 122 of file translation_glyph.hpp.

Member Function Documentation

◆ GetBarHeight()

int CTranslationConfig::GetBarHeight ( ) const

inline

Definition at line 372 of file translation_glyph.hpp.

References m_BarHeight.

Referenced by CTranslationGlyph::x_Draw(), and CTranslationGlyph::x_UpdateBoundingBox().

◆ GetCommentColor() [1/2]

CRgbaColor & CTranslationConfig::GetCommentColor ( )

inline

Definition at line 336 of file translation_glyph.hpp.

References m_CommentColor.

◆ GetCommentColor() [2/2]

const CRgbaColor & CTranslationConfig::GetCommentColor ( ) const

inline

Definition at line 340 of file translation_glyph.hpp.

References m_CommentColor.

◆ GetHighlightCodons()

bool CTranslationConfig::GetHighlightCodons ( ) const

inline

Definition at line 388 of file translation_glyph.hpp.

References m_HighlightCodons.

Referenced by CTranslationGlyph::x_Draw(), CSixFramesTransTrack::x_OnSettingIconClicked(), and CSixFramesTransTrack::x_SaveSettings().

◆ GetLabelBgColor() [1/2]

CRgbaColor & CTranslationConfig::GetLabelBgColor ( )

inline

Definition at line 324 of file translation_glyph.hpp.

References m_LabelBgColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetLabelBgColor() [2/2]

const CRgbaColor & CTranslationConfig::GetLabelBgColor ( ) const

inline

Definition at line 328 of file translation_glyph.hpp.

References m_LabelBgColor.

◆ GetOrfHighlightColor() [1/2]

CRgbaColor & CTranslationConfig::GetOrfHighlightColor ( )

inline

Definition at line 288 of file translation_glyph.hpp.

References m_OrfHighlightColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetOrfHighlightColor() [2/2]

const CRgbaColor & CTranslationConfig::GetOrfHighlightColor ( ) const

inline

Definition at line 292 of file translation_glyph.hpp.

References m_OrfHighlightColor.

◆ GetOrfSeqColor() [1/2]

CRgbaColor & CTranslationConfig::GetOrfSeqColor ( )

inline

Definition at line 312 of file translation_glyph.hpp.

References m_OrfSeqColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetOrfSeqColor() [2/2]

const CRgbaColor & CTranslationConfig::GetOrfSeqColor ( ) const

inline

Definition at line 316 of file translation_glyph.hpp.

References m_OrfSeqColor.

◆ GetOrfThreshold()

int CTranslationConfig::GetOrfThreshold ( ) const

inline

Definition at line 380 of file translation_glyph.hpp.

References m_OrfThreshold.

Referenced by CTranslationGlyph::x_Draw(), CSixFramesTransTrack::x_OnSettingIconClicked(), and CSixFramesTransTrack::x_SaveSettings().

◆ GetSeqColor() [1/2]

CRgbaColor & CTranslationConfig::GetSeqColor ( )

inline

Definition at line 300 of file translation_glyph.hpp.

References m_SeqColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetSeqColor() [2/2]

const CRgbaColor & CTranslationConfig::GetSeqColor ( ) const

inline

Definition at line 304 of file translation_glyph.hpp.

References m_SeqColor.

◆ GetSeqFont() [1/2]

CGlTextureFont & CTranslationConfig::GetSeqFont ( void )

inline

Definition at line 348 of file translation_glyph.hpp.

References m_SeqFont.

Referenced by CTranslationGlyph::x_Draw(), CTranslationGlyph::x_DrawSequence(), and CSixFramesTransTrack::x_LoadSettings().

◆ GetSeqFont() [2/2]

const CGlTextureFont & CTranslationConfig::GetSeqFont ( void ) const

inline

Definition at line 352 of file translation_glyph.hpp.

References m_SeqFont.

◆ GetStartCodonColor() [1/2]

CRgbaColor & CTranslationConfig::GetStartCodonColor ( )

inline

Definition at line 264 of file translation_glyph.hpp.

References m_StartCodonColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetStartCodonColor() [2/2]

const CRgbaColor & CTranslationConfig::GetStartCodonColor ( ) const

inline

Definition at line 268 of file translation_glyph.hpp.

References m_StartCodonColor.

◆ GetStopCodonColor() [1/2]

CRgbaColor & CTranslationConfig::GetStopCodonColor ( )

inline

Definition at line 276 of file translation_glyph.hpp.

References m_StopCodonColor.

Referenced by CTranslationGlyph::x_Draw().

◆ GetStopCodonColor() [2/2]

const CRgbaColor & CTranslationConfig::GetStopCodonColor ( ) const

inline

Definition at line 280 of file translation_glyph.hpp.

References m_StopCodonColor.

◆ GetStrandFont() [1/2]

CGlTextureFont & CTranslationConfig::GetStrandFont ( )

inline

Definition at line 360 of file translation_glyph.hpp.

References m_StrandFont.

Referenced by CTranslationGlyph::x_Draw(), and CSixFramesTransTrack::x_LoadSettings().

◆ GetStrandFont() [2/2]

const CGlTextureFont & CTranslationConfig::GetStrandFont ( ) const

inline

Definition at line 364 of file translation_glyph.hpp.

References m_StrandFont.

◆ SetBarHeight()

void CTranslationConfig::SetBarHeight ( int h )

inline

Definition at line 368 of file translation_glyph.hpp.

References m_BarHeight.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetCommentColor()

void CTranslationConfig::SetCommentColor ( const CRgbaColor & color )

inline

Definition at line 332 of file translation_glyph.hpp.

References color, and m_CommentColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetHighlightCodons()

void CTranslationConfig::SetHighlightCodons ( bool f )

inline

Definition at line 384 of file translation_glyph.hpp.

References f(), and m_HighlightCodons.

Referenced by CSixFramesTransTrack::x_LoadSettings(), and CSixFramesTransTrack::x_OnSettingIconClicked().

◆ SetLabelBgColor()

void CTranslationConfig::SetLabelBgColor ( const CRgbaColor & color )

inline

Definition at line 320 of file translation_glyph.hpp.

References color, and m_LabelBgColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetOrfHighlightColor()

void CTranslationConfig::SetOrfHighlightColor ( const CRgbaColor & color )

inline

Definition at line 284 of file translation_glyph.hpp.

References color, and m_OrfHighlightColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetOrfSeqColor()

void CTranslationConfig::SetOrfSeqColor ( const CRgbaColor & color )

inline

Definition at line 308 of file translation_glyph.hpp.

References color, and m_OrfSeqColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetOrfThreshold()

void CTranslationConfig::SetOrfThreshold ( int val )

inline

Definition at line 376 of file translation_glyph.hpp.

References m_OrfThreshold, and val.

Referenced by CSixFramesTransTrack::x_LoadSettings(), and CSixFramesTransTrack::x_OnSettingIconClicked().

◆ SetSeqColor()

void CTranslationConfig::SetSeqColor ( const CRgbaColor & color )

inline

Definition at line 296 of file translation_glyph.hpp.

References color, and m_SeqColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetSeqFont()

void CTranslationConfig::SetSeqFont	(	CGlTextureFont::EFontFace	font,
		unsigned int	font_size
	)

inline

Definition at line 344 of file translation_glyph.hpp.

References m_SeqFont, CGlTextureFont::SetFontFace(), and CGlTextureFont::SetFontSize().

◆ SetShowLabel()

void CTranslationConfig::SetShowLabel ( bool f )

inline

Definition at line 392 of file translation_glyph.hpp.

References f(), and m_ShowLabel.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetStartCodonColor()

void CTranslationConfig::SetStartCodonColor ( const CRgbaColor & color )

inline

CTranslationConfig inline methods.

Definition at line 260 of file translation_glyph.hpp.

References color, and m_StartCodonColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetStopCodonColor()

void CTranslationConfig::SetStopCodonColor ( const CRgbaColor & color )

inline

Definition at line 272 of file translation_glyph.hpp.

References color, and m_StopCodonColor.

Referenced by CSixFramesTransTrack::x_LoadSettings().

◆ SetStrandFont()

void CTranslationConfig::SetStrandFont	(	CGlTextureFont::EFontFace	font,
		unsigned int	font_size
	)

inline

Definition at line 356 of file translation_glyph.hpp.

References m_StrandFont, CGlTextureFont::SetFontFace(), and CGlTextureFont::SetFontSize().

◆ ShowLabel()

bool CTranslationConfig::ShowLabel ( ) const

inline

Definition at line 396 of file translation_glyph.hpp.

References m_ShowLabel.

Referenced by CTranslationGlyph::x_Draw().

Member Data Documentation

◆ m_BarHeight

int CTranslationConfig::m_BarHeight

private

Definition at line 187 of file translation_glyph.hpp.

Referenced by GetBarHeight(), and SetBarHeight().

◆ m_CommentColor

CRgbaColor CTranslationConfig::m_CommentColor

private

Definition at line 184 of file translation_glyph.hpp.

Referenced by GetCommentColor(), and SetCommentColor().

◆ m_HighlightCodons

bool CTranslationConfig::m_HighlightCodons

private

Definition at line 189 of file translation_glyph.hpp.

Referenced by GetHighlightCodons(), and SetHighlightCodons().

◆ m_LabelBgColor

CRgbaColor CTranslationConfig::m_LabelBgColor

private

Definition at line 183 of file translation_glyph.hpp.

Referenced by GetLabelBgColor(), and SetLabelBgColor().

◆ m_OrfHighlightColor

CRgbaColor CTranslationConfig::m_OrfHighlightColor

private

Definition at line 180 of file translation_glyph.hpp.

Referenced by GetOrfHighlightColor(), and SetOrfHighlightColor().

◆ m_OrfSeqColor

CRgbaColor CTranslationConfig::m_OrfSeqColor

private

Definition at line 182 of file translation_glyph.hpp.

Referenced by GetOrfSeqColor(), and SetOrfSeqColor().

◆ m_OrfThreshold

int CTranslationConfig::m_OrfThreshold

private

Definition at line 188 of file translation_glyph.hpp.

Referenced by GetOrfThreshold(), and SetOrfThreshold().

◆ m_SeqColor

CRgbaColor CTranslationConfig::m_SeqColor

private

Definition at line 181 of file translation_glyph.hpp.

Referenced by GetSeqColor(), and SetSeqColor().

◆ m_SeqFont

CGlTextureFont CTranslationConfig::m_SeqFont

private

Definition at line 185 of file translation_glyph.hpp.

Referenced by GetSeqFont(), and SetSeqFont().

◆ m_ShowLabel

bool CTranslationConfig::m_ShowLabel

private

Definition at line 190 of file translation_glyph.hpp.

Referenced by SetShowLabel(), and ShowLabel().

◆ m_StartCodonColor

CRgbaColor CTranslationConfig::m_StartCodonColor

private

Definition at line 178 of file translation_glyph.hpp.

Referenced by GetStartCodonColor(), and SetStartCodonColor().

◆ m_StopCodonColor

CRgbaColor CTranslationConfig::m_StopCodonColor

private

Definition at line 179 of file translation_glyph.hpp.

Referenced by GetStopCodonColor(), and SetStopCodonColor().

◆ m_StrandFont

CGlTextureFont CTranslationConfig::m_StrandFont

private

Definition at line 186 of file translation_glyph.hpp.

Referenced by GetStrandFont(), and SetStrandFont().

The documentation for this class was generated from the following file:

include/gui/widgets/seq_graphic/translation_glyph.hpp

Private Attributes
CRgbaColor	m_StartCodonColor

CRgbaColor	m_StopCodonColor

CRgbaColor	m_OrfHighlightColor

CRgbaColor	m_SeqColor

CRgbaColor	m_OrfSeqColor

CRgbaColor	m_LabelBgColor

CRgbaColor	m_CommentColor

CGlTextureFont	m_SeqFont

CGlTextureFont	m_StrandFont

int	m_BarHeight

int	m_OrfThreshold

bool	m_HighlightCodons

bool	m_ShowLabel

Public Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ CTranslationConfig()

Member Function Documentation

◆ GetBarHeight()

◆ GetCommentColor() [1/2]

◆ GetCommentColor() [2/2]

◆ GetHighlightCodons()

◆ GetLabelBgColor() [1/2]

◆ GetLabelBgColor() [2/2]

◆ GetOrfHighlightColor() [1/2]

◆ GetOrfHighlightColor() [2/2]

◆ GetOrfSeqColor() [1/2]

◆ GetOrfSeqColor() [2/2]

◆ GetOrfThreshold()

◆ GetSeqColor() [1/2]

◆ GetSeqColor() [2/2]

◆ GetSeqFont() [1/2]

◆ GetSeqFont() [2/2]

◆ GetStartCodonColor() [1/2]

◆ GetStartCodonColor() [2/2]

◆ GetStopCodonColor() [1/2]

◆ GetStopCodonColor() [2/2]

◆ GetStrandFont() [1/2]

◆ GetStrandFont() [2/2]

◆ SetBarHeight()

◆ SetCommentColor()

◆ SetHighlightCodons()

◆ SetLabelBgColor()

◆ SetOrfHighlightColor()

◆ SetOrfSeqColor()

◆ SetOrfThreshold()

◆ SetSeqColor()

◆ SetSeqFont()

◆ SetShowLabel()

◆ SetStartCodonColor()

◆ SetStopCodonColor()

◆ SetStrandFont()

◆ ShowLabel()

Member Data Documentation

◆ m_BarHeight

◆ m_CommentColor

◆ m_HighlightCodons

◆ m_LabelBgColor

◆ m_OrfHighlightColor

◆ m_OrfSeqColor

◆ m_OrfThreshold

◆ m_SeqColor

◆ m_SeqFont

◆ m_ShowLabel

◆ m_StartCodonColor

◆ m_StopCodonColor

◆ m_StrandFont