NCBI C++ ToolKit
CVDBGraphDataLoader Member List

This is the complete list of members for CVDBGraphDataLoader, including all inherited members.

AddReference(void) constCObjectinline
CanBeDeleted(void) const THROWS_NONECObjectinline
CanGetBlobById(void) const overrideCVDBGraphDataLoadervirtual
CDataLoader(void)CDataLoaderprotected
CDataLoader(const string &loader_name)CDataLoaderprotected
CDataLoader(const CDataLoader &)CDataLoaderprivate
CDebugDumpable(void)CDebugDumpableinline
CheckReferenceOverflow(TCount count) constCObjectprivate
ChoiceToDetails(EChoice choice) constCDataLoadervirtual
CObject(void)CObject
CObject(const CObject &src)CObject
CParamLoaderMaker< CVDBGraphDataLoader, SLoaderParams > classCVDBGraphDataLoaderfriend
CVDBGraphDataLoader(void)CVDBGraphDataLoaderprivate
CVDBGraphDataLoader(const string &loader_name, const SLoaderParams &params)CVDBGraphDataLoaderprivate
DebugDump(CDebugDumpContext ddc, unsigned int depth) constCObjectvirtual
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) constCDebugDumpable
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) constCDebugDumpable
DeleteThis(void)CObjectprotectedvirtual
DetailsToChoice(const SRequestDetails::TAnnotSet &annots) constCDataLoadervirtual
DetailsToChoice(const SRequestDetails &details) constCDataLoadervirtual
DoDeleteThisObject(void)CObjectvirtual
DoNotDeleteThisObject(void)CObjectvirtual
DropTSE(CRef< CTSE_Info > tse_info)CDataLoadervirtual
DumpToConsole(void) constCDebugDumpable
eAlign enum valueCDataLoader
eAll enum valueCDataLoader
EAllocFillMode enum nameCObject
eAllocFillNone enum valueCObject
eAllocFillPattern enum valueCObject
eAllocFillZero enum valueCObject
eAnnot enum valueCDataLoader
eBioseq enum valueCDataLoader
eBioseqCore enum valueCDataLoader
eBlob enum valueCDataLoader
EChoice enum nameCDataLoader
eCore enum valueCDataLoader
eCounterBitsCanBeDeletedCObjectstatic
eCounterBitsInPlainHeapCObjectstatic
eCounterBitsPlaceMaskCObjectstatic
eCounterStateMaskCObjectstatic
eCounterStepCObjectstatic
eCounterValidCObjectstatic
eExtAlign enum valueCDataLoader
eExtAnnot enum valueCDataLoader
eExtFeatures enum valueCDataLoader
eExtGraph enum valueCDataLoader
eFeatures enum valueCDataLoader
eGraph enum valueCDataLoader
EnableDebugDump(bool on)CDebugDumpablestatic
eOrphanAnnot enum valueCDataLoader
eSequence enum valueCDataLoader
EstimateLoadBytes(const CTSE_Chunk_Info &chunk) constCDataLoadervirtual
EstimateLoadSeconds(const CTSE_Chunk_Info &chunk, Uint4 bytes) constCDataLoadervirtual
GC(void)CDataLoadervirtual
GetAccVer(const CSeq_id_Handle &idh)CDataLoadervirtual
GetAccVerFound(const CSeq_id_Handle &idh)CDataLoadervirtual
GetAccVers(const TIds &ids, TLoaded &loaded, TIds &ret)CDataLoadervirtual
GetAllocFillMode(void)CObjectstatic
GetBlobById(const TBlobId &blob_id) overrideCVDBGraphDataLoadervirtual
GetBlobId(const CSeq_id_Handle &idh) overrideCVDBGraphDataLoadervirtual
GetBlobIdFromString(const string &str) const overrideCVDBGraphDataLoadervirtual
GetBlobs(TTSE_LockSets &tse_sets)CDataLoadervirtual
GetBlobVersion(const TBlobId &id)CDataLoadervirtual
GetBulkIds(const TIds &ids, TLoaded &loaded, TBulkIds &ret)CDataLoadervirtual
GetCDDAnnots(const TSeqIdSets &id_sets, TLoaded &loaded, TCDD_Locks &ret)CDataLoadervirtual
GetChunk(TChunk chunk) overrideCVDBGraphDataLoadervirtual
GetChunks(const TChunkSet &chunks) overrideCVDBGraphDataLoadervirtual
GetDataSource(void) constCDataLoaderprotected
GetDefaultBlobCacheSizeLimit() constCDataLoadervirtual
GetDefaultPriority(void) const overrideCVDBGraphDataLoadervirtual
GetDetailedRecords(const CSeq_id_Handle &idh, const SRequestDetails &details)CDataLoadervirtual
GetEditSaver() constCDataLoadervirtual
GetExternalAnnotRecords(const CSeq_id_Handle &idh, const SAnnotSelector *sel)CDataLoadervirtual
GetExternalAnnotRecords(const CBioseq_Info &bioseq, const SAnnotSelector *sel)CDataLoadervirtual
GetExternalAnnotRecordsNA(const CSeq_id_Handle &idh, const SAnnotSelector *sel, TProcessedNAs *processed_nas)CDataLoadervirtual
GetExternalAnnotRecordsNA(const CBioseq_Info &bioseq, const SAnnotSelector *sel, TProcessedNAs *processed_nas)CDataLoadervirtual
GetExternalRecords(const CBioseq_Info &bioseq)CDataLoadervirtual
GetGi(const CSeq_id_Handle &idh)CDataLoadervirtual
GetGiFound(const CSeq_id_Handle &idh)CDataLoadervirtual
GetGis(const TIds &ids, TLoaded &loaded, TGis &ret)CDataLoadervirtual
GetIds(const CSeq_id_Handle &idh, TIds &ids)CDataLoadervirtual
GetLabel(const CSeq_id_Handle &idh)CDataLoadervirtual
GetLabels(const TIds &ids, TLoaded &loaded, TLabels &ret)CDataLoadervirtual
GetLoaderNameFromArgs(void)CVDBGraphDataLoaderstatic
GetLoaderNameFromArgs(const string &vdb_files)CVDBGraphDataLoaderstatic
GetLoaderNameFromArgs(const TVDBFiles &vdb_files)CVDBGraphDataLoaderstatic
GetLoaderNameFromArgs(const SLoaderParams &params)CVDBGraphDataLoaderprivatestatic
GetName(void) constCDataLoader
GetOrphanAnnotRecords(const CSeq_id_Handle &idh, const SAnnotSelector *sel)CDataLoadervirtual
GetOrphanAnnotRecordsNA(const CSeq_id_Handle &idh, const SAnnotSelector *sel, TProcessedNAs *processed_nas) overrideCVDBGraphDataLoadervirtual
CDataLoader::GetOrphanAnnotRecordsNA(const TSeq_idSet &ids, const SAnnotSelector *sel, TProcessedNAs *processed_nas)CDataLoadervirtual
GetPossibleAnnotNames(void) constCVDBGraphDataLoadervirtual
GetRecords(const CSeq_id_Handle &idh, EChoice choice) overrideCVDBGraphDataLoadervirtual
GetRecordsNoBlobState(const CSeq_id_Handle &idh, EChoice choice)CDataLoader
GetSequenceHash(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceHashes(const TIds &ids, TLoaded &loaded, TSequenceHashes &ret, THashKnown &known)CDataLoadervirtual
GetSequenceHashFound(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceLength(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceLengths(const TIds &ids, TLoaded &loaded, TSequenceLengths &ret)CDataLoadervirtual
GetSequenceState(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceStates(const TIds &ids, TLoaded &loaded, TSequenceStates &ret)CDataLoadervirtual
GetSequenceType(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceTypeFound(const CSeq_id_Handle &idh)CDataLoadervirtual
GetSequenceTypes(const TIds &ids, TLoaded &loaded, TSequenceTypes &ret)CDataLoadervirtual
GetTaxId(const CSeq_id_Handle &idh)CDataLoadervirtual
GetTaxIds(const TIds &ids, TLoaded &loaded, TTaxIds &ret)CDataLoadervirtual
GetTrackSplitSeq() constCDataLoadervirtual
InitCounter(void)CObjectinlineprivate
InvalidObject(void) constCObjectprivate
IsAllocatedInPool(void) const THROWS_NONECObjectinline
IsProcessedNA(const string &na, const TProcessedNAs *processed_nas)CDataLoaderstatic
IsRequestedAnyNA(const SAnnotSelector *sel)CDataLoaderstatic
IsRequestedNA(const string &na, const SAnnotSelector *sel)CDataLoaderstatic
m_CounterCObjectmutableprivate
m_DataSourceCDataLoaderprivate
m_ImplCVDBGraphDataLoaderprivate
m_NameCDataLoaderprivate
ObjectStateCanBeDeleted(TCount count)CObjectinlineprivatestatic
ObjectStateIsAllocatedInPool(TCount count)CObjectinlineprivatestatic
ObjectStateReferenced(TCount count)CObjectinlineprivatestatic
ObjectStateReferencedOnlyOnce(TCount count)CObjectinlineprivatestatic
ObjectStateUnreferenced(TCount count)CObjectinlineprivatestatic
ObjectStateValid(TCount count)CObjectinlineprivatestatic
operator delete(void *ptr)CObject
operator delete(void *ptr, void *place)CObject
operator delete(void *ptr, CObjectMemoryPool *place)CObject
operator delete[](void *ptr)CObject
operator new(size_t size)CObject
operator new(size_t size, void *place)CObject
operator new(size_t size, CObjectMemoryPool *place)CObject
operator new[](size_t size)CObject
operator=(const CDataLoader &)CDataLoaderprivate
CObject::operator=(const CObject &src) THROWS_NONECObjectinline
Referenced(void) const THROWS_NONECObjectinline
ReferencedOnlyOnce(void) const THROWS_NONECObjectinline
RegisterInObjectManager(CObjectManager &om, CObjectManager::EIsDefault is_default=CObjectManager::eNonDefault, CObjectManager::TPriority priority=CObjectManager::kPriority_NotSet)CVDBGraphDataLoaderstatic
RegisterInObjectManager(CObjectManager &om, const string &vdb_file, CObjectManager::EIsDefault is_default=CObjectManager::eNonDefault, CObjectManager::TPriority priority=CObjectManager::kPriority_NotSet)CVDBGraphDataLoaderstatic
RegisterInObjectManager(CObjectManager &om, const TVDBFiles &vdb_files, CObjectManager::EIsDefault is_default=CObjectManager::eNonDefault, CObjectManager::TPriority priority=CObjectManager::kPriority_NotSet)CVDBGraphDataLoaderstatic
CDataLoader::RegisterInObjectManager(CObjectManager &om, CLoaderMaker_Base &loader_maker, CObjectManager::EIsDefault is_default, CObjectManager::TPriority priority)CDataLoaderprotectedstatic
ReleaseReference(void) constCObject
RemoveLastReference(TCount count) constCObjectprivate
RemoveReference(void) constCObjectinline
ResolveConflict(const CSeq_id_Handle &id, const TTSE_LockSet &tse_set)CDataLoadervirtual
SequenceExists(const CSeq_id_Handle &idh)CDataLoader
SetAllocFillMode(EAllocFillMode mode)CObjectstatic
SetAllocFillMode(const string &value)CObjectstatic
SetName(const string &loader_name)CDataLoaderprotected
SetProcessedNA(const string &na, TProcessedNAs *processed_nas)CDataLoaderstatic
SetTargetDataSource(CDataSource &data_source)CDataLoader
sm_DumpEnabledCDebugDumpableprivatestatic
TAnnotNames typedefCVDBGraphDataLoader
TBlobId typedefCDataLoader
TBlobVersion typedefCDataLoader
TBulkIds typedefCDataLoader
TCDD_Locks typedefCDataLoader
TChunk typedefCDataLoader
TChunkSet typedefCDataLoader
TCount typedefCObject
TCounter typedefCObject
TEditSaver typedefCDataLoader
TGis typedefCDataLoader
THashKnown typedefCDataLoader
ThrowNullPointerException(void)CObjectstatic
ThrowNullPointerException(const type_info &type)CObjectstatic
TIds typedefCDataLoader
TLabels typedefCDataLoader
TLoaded typedefCDataLoader
TLockerType typedefCObject
TMaker typedefCVDBGraphDataLoaderprivate
TProcessedNAs typedefCDataLoader
TRegisterLoaderInfo typedefCVDBGraphDataLoader
TSeq_idSet typedefCDataLoader
TSeqIdSets typedefCDataLoader
TSequenceHashes typedefCDataLoader
TSequenceLengths typedefCDataLoader
TSequenceStates typedefCDataLoader
TSequenceTypes typedefCDataLoader
TTaxIds typedefCDataLoader
TTSE_Lock typedefCDataLoader
TTSE_LockSet typedefCDataLoader
TTSE_LockSets typedefCDataLoader
TVDBFiles typedefCVDBGraphDataLoader
~CDataLoader(void)CDataLoadervirtual
~CDebugDumpable(void)CDebugDumpablevirtual
~CObject(void)CObjectvirtual
~CVDBGraphDataLoader(void)CVDBGraphDataLoaderprivate
Modified on Sun Apr 21 03:44:39 2024 by modify_doxy.py rev. 669887