NCBI C++ ToolKit
Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
IEditingActionFeat Class Reference

Search Toolkit Book for IEditingActionFeat

#include <gui/packages/pkg_sequence_edit/editing_action_features.hpp>

+ Inheritance diagram for IEditingActionFeat:
+ Collaboration diagram for IEditingActionFeat:

Public Member Functions

 IEditingActionFeat (CSeq_entry_Handle seh, const CSeqFeatData::ESubtype subtype, const CSeqFeatData::E_Choice feat_type, const string &ncRNA_class, const string &name)
 
virtual void SetFeat (CSeq_feat_Handle fh)
 
CSeq_feat_Handle GetFeatHandle (void)
 
CSeqFeatData::ESubtype GetActionFeatSubtype ()
 
CSeq_feat_Handle x_FindGeneForFeature (const CSeq_loc &loc, CScope &scope, CSeqFeatData::ESubtype subtype)
 
- Public Member Functions inherited from IEditingAction
 IEditingAction (CSeq_entry_Handle seh, const string &name, CConstRef< objects::CSeq_submit > submit=CConstRef< objects::CSeq_submit >(NULL))
 
virtual ~IEditingAction ()
 
const string GetName (void) const
 
const map< CSeq_feat_Handle, CRef< CSeq_feat > > & GetChangedFeatures (void)
 
const map< CSeq_feat_Handle, CSeq_entry_Handle > & GetCreatedFeatures (void)
 
const map< const CSeqdesc *, CRef< CSeqdesc > > & GetChangedDescriptors (void)
 
const map< const CSeqdesc *, CSeq_entry_Handle > & GetContextForDescriptors (void)
 
const map< const CSeqdesc *, CSeq_entry_Handle > & GetCreatedDescriptors (void)
 
const map< const CSeqdesc *, CSeq_entry_Handle > & GetDeletedDescriptors (void)
 
const map< CBioseq_Handle, CRef< CSeq_inst > > & GetChangedInstances (void)
 
CRef< CSubmit_blockGetChangedSubmitBlock (void)
 
const vector< string > & GetChangedValues (void)
 
bool GetChangedIds (void)
 
void ResetChangedFeatures (void)
 
void ResetChangedDescriptors (void)
 
void ResetChangedInstances (void)
 
void ResetChangedIds (void)
 
void ResetChangedValues (void)
 
void SetExistingText (edit::EExistingText existing_text)
 
void SetConstraint (CRef< CEditingActionConstraint > constraint)
 
void SetTopSeqEntry (CSeq_entry_Handle seh)
 
void SetCurrentSeqEntry (CSeq_entry_Handle seh)
 
CRef< CCmdCompositeGetActionCommand (void)
 
CConstRef< objects::CSeq_submit > GetSeqSubmit (void)
 
bool CheckValue (void)
 
bool CheckValues (void)
 
const vector< string > & GetValues (void)
 
void Apply (const string &value)
 
void Edit (const string &find, const string &replace, macro::CMacroFunction_EditStringQual::ESearchLoc edit_loc, bool case_insensitive, bool is_regex)
 
void Remove (void)
 
void RemoveOutside (CRef< macro::CRemoveTextOptions > options)
 
void ConvertFrom (ECapChange cap_change, bool leave_on_original, const string &strip_name, IEditingAction *destination)
 
void ConvertTo (const string &value, IEditingAction *source)
 
void CopyFrom (IEditingAction *destination)
 
void CopyTo (const string &value, IEditingAction *source)
 
void SwapFrom (IEditingAction *destination)
 
void SwapTo (const string &value, IEditingAction *source)
 
void ParseFrom (edit::CParseTextOptions parse_options, IEditingAction *destination)
 
void ParseTo (const string &value, IEditingAction *source)
 
void NOOP (void)
 
int CheckForExistingText (CIRef< IEditingAction > action2, EActionType action_type, edit::CParseTextOptions parse_options=edit::CParseTextOptions())
 
void SetUpdateMRNAProduct (bool value)
 
void SetRetranslateCds (bool value)
 
bool IsModified ()
 
void SetMaxRecords (size_t max)
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 

Static Public Member Functions

static bool s_IsSetncRNAClass (const objects::CRNA_ref &rna_ref)
 
static const strings_GetncRNAClass (const objects::CRNA_ref &rna_ref)
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 

Protected Member Functions

virtual void Find (EActionType action)
 
virtual void FindRelated (EActionType action)
 
virtual void Modify (EActionType action)
 
virtual void SwapContext (IEditingAction *source)
 
virtual bool SameObject ()
 
bool OtherFeatIs (const CSeqFeatData::ESubtype subtype)
 
void FindFeatForAnotherFeat (EActionType action, SAnnotSelector other_selector)
 
void FindRelatedFeatForAnotherFeat (EActionType action, SAnnotSelector other_selector)
 
void FindOrCreateProtFeat (EActionType action)
 
void FindRelatedOrCreateProtFeat (EActionType action)
 
void GoToProtFeature (void)
 
void GoToOrigFeature (void)
 
bool x_TestGeneForFeature (const CSeq_loc &gene_loc, const CSeq_loc &feat_loc, CScope &scope, bool &exact, TSeqPos &diff)
 
CRef< CSeq_locx_GetSublocOnBioseq (CBioseq_Handle bsh, const CSeq_loc &loc)
 
CRef< CSeq_locx_MergeFeatureLocation (const CSeq_loc &loc, CScope &scope)
 
void RemoveGeneXref (void)
 
void SetFeatForAnotherFeat (CSeq_feat_Handle fh, const CSeqFeatData::ESubtype subtype)
 
CSeq_entry_Handle GetCurrentSeqEntryHandleFromFeatHandle (CSeq_feat_Handle fh)
 
bool MatchBioseqConstraintForFeatHandle (CSeq_feat_Handle fh)
 
virtual void ResetScope ()
 
- Protected Member Functions inherited from IEditingAction
bool IsNOOP (EActionType action)
 
bool IsFrom (EActionType action)
 
bool IsTo (EActionType action)
 
bool IsCreateNew (EActionType action)
 
CIRef< IEditCommandGetUpdateMRNAProductNameCmd (const CSeq_feat_Handle fh, const CRef< CSeq_feat > feat)
 
CRef< CCmdCompositeGetRetranslateCdsCmd (const CSeq_feat_Handle fh, const CRef< CSeq_feat > feat, int &offset, bool create_general_only)
 
void Action (EActionType action)
 
void DoApply (void)
 
void DoEdit (void)
 
void DoRemove (void)
 
void DoRemoveOutside (void)
 
void DoConvertFrom (void)
 
void DoConvertTo (void)
 
void DoCopyFrom (void)
 
void DoCopyTo (void)
 
void DoSwapFrom (void)
 
void DoSwapTo (void)
 
void DoParseFrom (void)
 
void DoParseTo (void)
 
void DoNOOP (void)
 
void HandleValue (const string &value)
 
virtual bool IsSetValue (void)=0
 
virtual void SetValue (const string &value)=0
 
virtual string GetValue (void)=0
 
virtual void ResetValue (void)=0
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Protected Attributes

CRef< CScopem_scope
 
SAnnotSelector m_selector
 
string m_ncRNAclass
 
CSeq_feat_Handle m_Feat
 
CRef< CSeq_featm_EditedFeat
 
CSeq_feat_Handle m_SavedFeat
 
CRef< CSeq_featm_SavedEditedFeat
 
bool m_saved_feat_enabled
 
- Protected Attributes inherited from IEditingAction
map< CSeq_feat_Handle, CRef< CSeq_feat > > m_ChangedFeatures
 
map< CSeq_feat_Handle, CSeq_entry_Handlem_CreatedFeatures
 
map< const CSeqdesc *, CRef< CSeqdesc > > m_ChangedDescriptors
 
map< const CSeqdesc *, CSeq_entry_Handlem_ContextForDescriptors
 
map< const CSeqdesc *, CSeq_entry_Handlem_CreatedDescriptors
 
map< const CSeqdesc *, CSeq_entry_Handlem_DeletedDescriptors
 
map< CBioseq_Handle, CRef< CSeq_inst > > m_ChangedInstances
 
CRef< CSubmit_blockm_ChangedSubmitBlock
 
vector< stringm_ChangedValues
 
bool m_ChangedIds
 
string m_Name
 
CSeq_entry_Handle m_TopSeqEntry
 
CConstRef< objects::CSeq_submit > m_SeqSubmit
 
CSeq_entry_Handle m_CurrentSeqEntry
 
bool m_modified
 
IEditingActionm_Other
 
string m_value
 
string m_find
 
string m_replace
 
string m_strip_name
 
macro::CMacroFunction_EditStringQual::ESearchLoc m_edit_loc
 
bool m_case_insensitive
 
bool m_is_regex
 
CRef< macro::CRemoveTextOptions > m_remove_options
 
ECapChange m_cap_change
 
bool m_leave_on_original
 
edit::CParseTextOptions m_parse_options
 
edit::EExistingText m_existing_text
 
CRef< CEditingActionConstraintm_constraint
 
bool m_update_mrna
 
bool m_retranslate_cds
 
size_t m_max_records
 

Additional Inherited Members

- Public Types inherited from IEditingAction
enum  EActionType {
  eActionType_NOOP = 0 , eActionType_Apply , eActionType_Edit , eActionType_Remove ,
  eActionType_RemoveOutside , eActionType_ConvertFrom , eActionType_CopyFrom , eActionType_ParseFrom ,
  eActionType_SwapFrom , eActionType_ConvertTo , eActionType_CopyTo , eActionType_ParseTo ,
  eActionType_SwapTo
}
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 

Detailed Description

Definition at line 50 of file editing_action_features.hpp.

Constructor & Destructor Documentation

◆ IEditingActionFeat()

IEditingActionFeat::IEditingActionFeat ( CSeq_entry_Handle  seh,
const CSeqFeatData::ESubtype  subtype,
const CSeqFeatData::E_Choice  feat_type,
const string ncRNA_class,
const string name 
)

Definition at line 59 of file editing_action_features.cpp.

References CSeqFeatData::eSubtype_any, m_ncRNAclass, and m_selector.

Member Function Documentation

◆ Find()

void IEditingActionFeat::Find ( EActionType  action)
protectedvirtual

◆ FindFeatForAnotherFeat()

void IEditingActionFeat::FindFeatForAnotherFeat ( EActionType  action,
SAnnotSelector  other_selector 
)
protected

◆ FindOrCreateProtFeat()

void IEditingActionFeat::FindOrCreateProtFeat ( EActionType  action)
protected

Definition at line 893 of file editing_action_features.cpp.

References CSeq_annot_EditHandle::AddFeat(), CScope::AddTopLevelSeqEntry(), CSeq_loc::Assign(), CSerialObject::Assign(), CSeq_entry_EditHandle::AttachAnnot(), CSeqFeatData_Base::e_Prot, CScope::eExist_Get, eExtreme_Biological, map_checker< Container >::end(), NStr::EqualCase(), CSeq_annot_CI::eSearch_entry, CSeqFeatData::eSubtype_ncRNA, CSeqFeatData::eSubtype_prot, map_checker< Container >::find(), ftable, CScope::GetBioseqHandle(), GetCurrentSeqEntryHandleFromFeatHandle(), CSeq_feat_Handle::GetData(), CSeq_entry_Handle::GetEditHandle(), CSeq_feat_Handle::GetFeatSubtype(), SAnnotTypeSelector::GetFeatType(), CSeq_feat_Base::GetLocation(), CSeq_feat_Handle::GetOriginalSeq_feat(), CSeq_feat_Handle::GetProduct(), CBioseq_Handle::GetRangeSeq_loc(), CSeqFeatData_Base::GetRna(), CSeq_entry_Handle::GetScope(), CBioseq_Handle::GetSeq_entry_Handle(), CSeq_entry_Handle::GetSeq_entryCore(), CMappedFeat::GetSeq_feat_Handle(), IEditingAction::IsNOOP(), CSeq_loc::IsPartialStart(), CSeq_loc::IsPartialStop(), CSeq_feat_Handle::IsSetProduct(), CScope::kPriority_Default, IEditingAction::m_ChangedFeatures, IEditingAction::m_constraint, IEditingAction::m_CreatedFeatures, IEditingAction::m_CurrentSeqEntry, m_EditedFeat, m_Feat, IEditingAction::m_max_records, m_ncRNAclass, m_scope, m_selector, IEditingAction::m_TopSeqEntry, CEditingActionConstraint::Match(), MatchBioseqConstraintForFeatHandle(), Modify(), CRef< C, Locker >::Reset(), CSeq_feat_Handle::Reset(), s_GetncRNAClass(), s_IsSetncRNAClass(), CSeq_feat_Base::SetData(), CSeq_feat_Base::SetLocation(), and CSeq_feat_Base::SetPartial().

Referenced by CEditingActionFeatEcNumber::Find(), and CEditingActionFeatProduct::Find().

◆ FindRelated()

void IEditingActionFeat::FindRelated ( EActionType  action)
protectedvirtual

◆ FindRelatedFeatForAnotherFeat()

void IEditingActionFeat::FindRelatedFeatForAnotherFeat ( EActionType  action,
SAnnotSelector  other_selector 
)
protected

◆ FindRelatedOrCreateProtFeat()

void IEditingActionFeat::FindRelatedOrCreateProtFeat ( EActionType  action)
protected

◆ GetActionFeatSubtype()

CSeqFeatData::ESubtype IEditingActionFeat::GetActionFeatSubtype ( )
inline

◆ GetCurrentSeqEntryHandleFromFeatHandle()

CSeq_entry_Handle IEditingActionFeat::GetCurrentSeqEntryHandleFromFeatHandle ( CSeq_feat_Handle  fh)
protected

◆ GetFeatHandle()

CSeq_feat_Handle IEditingActionFeat::GetFeatHandle ( void  )

◆ GoToOrigFeature()

void IEditingActionFeat::GoToOrigFeature ( void  )
protected

◆ GoToProtFeature()

void IEditingActionFeat::GoToProtFeature ( void  )
protected

◆ MatchBioseqConstraintForFeatHandle()

bool IEditingActionFeat::MatchBioseqConstraintForFeatHandle ( CSeq_feat_Handle  fh)
protected

◆ Modify()

void IEditingActionFeat::Modify ( EActionType  action)
protectedvirtual

◆ OtherFeatIs()

bool IEditingActionFeat::OtherFeatIs ( const CSeqFeatData::ESubtype  subtype)
protected

◆ RemoveGeneXref()

void IEditingActionFeat::RemoveGeneXref ( void  )
protected

◆ ResetScope()

void IEditingActionFeat::ResetScope ( )
protectedvirtual

◆ s_GetncRNAClass()

const string & IEditingActionFeat::s_GetncRNAClass ( const objects::CRNA_ref &  rna_ref)
static

◆ s_IsSetncRNAClass()

bool IEditingActionFeat::s_IsSetncRNAClass ( const objects::CRNA_ref &  rna_ref)
static

◆ SameObject()

bool IEditingActionFeat::SameObject ( )
protectedvirtual

◆ SetFeat()

void IEditingActionFeat::SetFeat ( CSeq_feat_Handle  fh)
virtual

◆ SetFeatForAnotherFeat()

void IEditingActionFeat::SetFeatForAnotherFeat ( CSeq_feat_Handle  fh,
const CSeqFeatData::ESubtype  subtype 
)
protected

◆ SwapContext()

void IEditingActionFeat::SwapContext ( IEditingAction source)
protectedvirtual

Reimplemented from IEditingAction.

Definition at line 1153 of file editing_action_features.cpp.

References m_EditedFeat, m_Feat, rapidjson::source, swap(), and IEditingAction::SwapContext().

◆ x_FindGeneForFeature()

CSeq_feat_Handle IEditingActionFeat::x_FindGeneForFeature ( const CSeq_loc loc,
CScope scope,
CSeqFeatData::ESubtype  subtype 
)

◆ x_GetSublocOnBioseq()

CRef< CSeq_loc > IEditingActionFeat::x_GetSublocOnBioseq ( CBioseq_Handle  bsh,
const CSeq_loc loc 
)
protected

◆ x_MergeFeatureLocation()

CRef< CSeq_loc > IEditingActionFeat::x_MergeFeatureLocation ( const CSeq_loc loc,
CScope scope 
)
protected

◆ x_TestGeneForFeature()

bool IEditingActionFeat::x_TestGeneForFeature ( const CSeq_loc gene_loc,
const CSeq_loc feat_loc,
CScope scope,
bool exact,
TSeqPos diff 
)
protected

Member Data Documentation

◆ m_EditedFeat

CRef<CSeq_feat> IEditingActionFeat::m_EditedFeat
protected

Definition at line 95 of file editing_action_features.hpp.

Referenced by Find(), CEditingActionFeatGeneLocusPlain::Find(), CEditingActionFeatGeneLocusRna::Find(), CEditingActionFeatGeneLocusCdsGeneProt::Find(), FindFeatForAnotherFeat(), FindOrCreateProtFeat(), FindRelated(), CEditingActionFeatGeneLocus::FindRelated(), FindRelatedFeatForAnotherFeat(), FindRelatedOrCreateProtFeat(), CEditingActionFeatComment::GetValue(), CEditingActionFeatException::GetValue(), CEditingActionFeatEvidence::GetValue(), CEditingActionFeatPseudo::GetValue(), CEditingActionFeatCodonsRecognized::GetValue(), CEditingActionFeatAnticodon::GetValue(), CEditingActionFeatRegion::GetValue(), CEditingActionFeatCodonStart::GetValue(), CEditingActionFeatTranslTable::GetValue(), CEditingActionFeatDesc::GetValue(), CEditingActionFeatNcRnaClass::GetValue(), CEditingActionFeatLocus_tag::GetValue(), CEditingActionFeatMaploc::GetValue(), CEditingActionFeatAllele::GetValue(), CEditingActionFeatPartial::GetValue(), CEditingActionFeatTranslation::GetValue(), CEditingActionFeatProduct::GetValue(), CEditingActionFeatGeneLocus::GetValue(), CEditingActionFeatTranscriptId::GetValue(), GoToOrigFeature(), GoToProtFeature(), CEditingActionFeatComment::IsSetValue(), CEditingActionFeatException::IsSetValue(), CEditingActionFeatEvidence::IsSetValue(), CEditingActionFeatPseudo::IsSetValue(), CEditingActionFeatCodonsRecognized::IsSetValue(), CEditingActionFeatAnticodon::IsSetValue(), CEditingActionFeatRegion::IsSetValue(), CEditingActionFeatCodonStart::IsSetValue(), CEditingActionFeatTranslTable::IsSetValue(), CEditingActionFeatDesc::IsSetValue(), CEditingActionFeatNcRnaClass::IsSetValue(), CEditingActionFeatLocus_tag::IsSetValue(), CEditingActionFeatMaploc::IsSetValue(), CEditingActionFeatAllele::IsSetValue(), CEditingActionFeatPartial::IsSetValue(), CEditingActionFeatTranslation::IsSetValue(), CEditingActionFeatProduct::IsSetValue(), CEditingActionFeatGeneLocus::IsSetValue(), CEditingActionFeatTranscriptId::IsSetValue(), Modify(), CEditingActionFeatGbQual::Modify(), CEditingActionFeatGbQualTwoNames::Modify(), CEditingActionFeatDbxref::Modify(), CEditingActionFeatTranslExcept::Modify(), CEditingActionFeatRnaQual::Modify(), CEditingActionFeatSynonym::Modify(), CEditingActionFeatActivity::Modify(), CEditingActionFeatEcNumber::Modify(), CEditingActionFeatFunction::Modify(), CEditingActionFeatProduct::Modify(), RemoveGeneXref(), CEditingActionFeatComment::ResetValue(), CEditingActionFeatException::ResetValue(), CEditingActionFeatEvidence::ResetValue(), CEditingActionFeatPseudo::ResetValue(), CEditingActionFeatCodonsRecognized::ResetValue(), CEditingActionFeatAnticodon::ResetValue(), CEditingActionFeatRegion::ResetValue(), CEditingActionFeatCodonStart::ResetValue(), CEditingActionFeatTranslTable::ResetValue(), CEditingActionFeatDesc::ResetValue(), CEditingActionFeatNcRnaClass::ResetValue(), CEditingActionFeatLocus_tag::ResetValue(), CEditingActionFeatMaploc::ResetValue(), CEditingActionFeatAllele::ResetValue(), CEditingActionFeatPartial::ResetValue(), CEditingActionFeatProduct::ResetValue(), CEditingActionFeatGeneLocus::ResetValue(), CEditingActionFeatTranscriptId::ResetValue(), SetFeat(), SetFeatForAnotherFeat(), CEditingActionFeatComment::SetValue(), CEditingActionFeatException::SetValue(), CEditingActionFeatGbQual::SetValue(), CEditingActionFeatDualVal1::SetValue(), CEditingActionFeatDualVal2::SetValue(), CEditingActionFeatDbxref::SetValue(), CEditingActionFeatEvidence::SetValue(), CEditingActionFeatPseudo::SetValue(), CEditingActionFeatCodonsRecognized::SetValue(), CEditingActionFeatAnticodon::SetValue(), CEditingActionFeatTranslExcept::SetValue(), CEditingActionFeatRnaQual::SetValue(), CEditingActionFeatRegion::SetValue(), CEditingActionFeatCodonStart::SetValue(), CEditingActionFeatTranslTable::SetValue(), CEditingActionFeatDesc::SetValue(), CEditingActionFeatNcRnaClass::SetValue(), CEditingActionFeatLocus_tag::SetValue(), CEditingActionFeatMaploc::SetValue(), CEditingActionFeatSynonym::SetValue(), CEditingActionFeatAllele::SetValue(), CEditingActionFeatActivity::SetValue(), CEditingActionFeatPartial::SetValue(), CEditingActionFeatTranslation::SetValue(), CEditingActionFeatEcNumber::SetValue(), CEditingActionFeatFunction::SetValue(), CEditingActionFeatProduct::SetValue(), CEditingActionFeatGeneLocus::SetValue(), CEditingActionFeatTranscriptId::SetValue(), and SwapContext().

◆ m_Feat

CSeq_feat_Handle IEditingActionFeat::m_Feat
protected

◆ m_ncRNAclass

string IEditingActionFeat::m_ncRNAclass
protected

◆ m_saved_feat_enabled

bool IEditingActionFeat::m_saved_feat_enabled
protected

Definition at line 99 of file editing_action_features.hpp.

Referenced by GoToOrigFeature(), and GoToProtFeature().

◆ m_SavedEditedFeat

CRef<CSeq_feat> IEditingActionFeat::m_SavedEditedFeat
protected

Definition at line 98 of file editing_action_features.hpp.

Referenced by GoToOrigFeature(), and GoToProtFeature().

◆ m_SavedFeat

CSeq_feat_Handle IEditingActionFeat::m_SavedFeat
protected

Definition at line 97 of file editing_action_features.hpp.

Referenced by GoToOrigFeature(), and GoToProtFeature().

◆ m_scope

CRef<CScope> IEditingActionFeat::m_scope
protected

◆ m_selector

SAnnotSelector IEditingActionFeat::m_selector
protected

The documentation for this class was generated from the following files:
Modified on Thu Nov 30 04:56:10 2023 by modify_doxy.py rev. 669887