NCBI C++ ToolKit
IHitMatrixDataSource Member List
This is the complete list of members for
IHitMatrixDataSource
, including all inherited members.
CanCreateRowBased
() const =0
IHitMatrixDataSource
pure virtual
GetAlignedIds
(const IHitSeqId &id, TIdVector &aligned)=0
IHitMatrixDataSource
pure virtual
GetAlignedIdsForParams
(const IHitSeqId &id, const TIdVector &ids, TIdVector &aligned, const SParams ¶ms)=0
IHitMatrixDataSource
pure virtual
GetBioseqHandle
(const IHitSeqId &id)=0
IHitMatrixDataSource
pure virtual
GetHits
() const =0
IHitMatrixDataSource
pure virtual
GetHitSeqIds
()=0
IHitMatrixDataSource
pure virtual
GetHitSeqIdsForParams
(TIdVector &ids, const SParams ¶ms) const =0
IHitMatrixDataSource
pure virtual
GetLabel
(const IHitSeqId &id)=0
IHitMatrixDataSource
pure virtual
GetParams
(SParams ¶ms) const =0
IHitMatrixDataSource
pure virtual
GetQueryHandle
()=0
IHitMatrixDataSource
pure virtual
GetQueryHitsRange
()=0
IHitMatrixDataSource
pure virtual
GetQueryId
() const =0
IHitMatrixDataSource
pure virtual
GetScope
()=0
IHitMatrixDataSource
pure virtual
GetScoreNames
(vector< string > &names) const =0
IHitMatrixDataSource
pure virtual
GetScoreRange
(const string &name) const =0
IHitMatrixDataSource
pure virtual
GetSubjectHandle
()=0
IHitMatrixDataSource
pure virtual
GetSubjectHitsRange
()=0
IHitMatrixDataSource
pure virtual
GetSubjectId
() const =0
IHitMatrixDataSource
pure virtual
Init
(objects::CScope &scope, TAlignVector &aligns)=0
IHitMatrixDataSource
pure virtual
SelectDefaultIds
()=0
IHitMatrixDataSource
pure virtual
SelectIds
(const IHitSeqId &q_id, const IHitSeqId &s_id)=0
IHitMatrixDataSource
pure virtual
SetParams
(const SParams ¶ms, bool create_hits)=0
IHitMatrixDataSource
pure virtual
TAlignVector
typedef
IHitMatrixDataSource
TDirection
typedef
IHitMatrixDataSource
THitAdapterCont
typedef
IHitMatrixDataSource
TIdVector
typedef
IHitMatrixDataSource
TValueRange
typedef
IHitMatrixDataSource
~IHitMatrixDataSource
()
IHitMatrixDataSource
inline
virtual
Generated by
1.9.0
Modified on Fri Sep 20 14:57:45 2024 by modify_doxy.py rev. 669887