array< T > Class Template Reference

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#include "sls_alp_data.hpp"
(Private to src/algo/blast/gumbel_params.)

Inheritance diagram for array< T >:

Collaboration diagram for array< T >:

Public Member Functions
	array (alp_data *alp_data_)
	~array ()
void	increment_array_on_the_rigth ()
void	increment_array_on_the_left ()
void	set_elem (Int4 ind_, T elem_)
void	increase_elem_by_1 (Int4 ind_)

Public Attributes
Int4	d_step
Int4	d_dim
Int4	d_ind0
Int4	d_dim_plus_d_ind0
T *	d_elem
alp_data *	d_alp_data

Detailed Description

template<typename T>
class array< T >

Definition at line 193 of file sls_alp_data.hpp.

Constructor & Destructor Documentation

array()

template<typename T >

array< T >::array ( alp_data *  alp_data_ )

inline

Definition at line 195 of file sls_alp_data.hpp.

~array()

template<class T >

array< T >::~array

Definition at line 721 of file sls_alp_data.hpp.

References mb_bytes, NULL, and T.

Member Function Documentation

increase_elem_by_1()

template<typename T >

void array< T >::increase_elem_by_1 ( Int4  ind_ )

inline

Definition at line 229 of file sls_alp_data.hpp.

Referenced by alp::increment_H_weights(), and alp::increment_H_weights_with_sentinels().

increment_array_on_the_left()

template<class T >

void array< T >::increment_array_on_the_left

Definition at line 796 of file sls_alp_data.hpp.

References alp_data::assert_mem(), error::error_code, i, mb_bytes, NULL, error::st, and T.

Referenced by array< time_point, eSize >::increase_elem_by_1(), and array< time_point, eSize >::set_elem().

increment_array_on_the_rigth()

template<class T >

void array< T >::increment_array_on_the_rigth

Definition at line 732 of file sls_alp_data.hpp.

References alp_data::assert_mem(), error::error_code, i, mb_bytes, NULL, error::st, and T.

Referenced by array< time_point, eSize >::increase_elem_by_1(), and array< time_point, eSize >::set_elem().

set_elem()

template<typename T >

void array< T >::set_elem ( Int4  ind_, T  elem_  )

inline

Definition at line 212 of file sls_alp_data.hpp.

Referenced by alp::restore_state(), and alp::save_state().

Member Data Documentation

d_alp_data

template<typename T >

alp_data* array< T >::d_alp_data

Definition at line 253 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array().

d_dim

template<typename T >

Int4 array< T >::d_dim

Definition at line 249 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array().

d_dim_plus_d_ind0

template<typename T >

Int4 array< T >::d_dim_plus_d_ind0

Definition at line 251 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array(), alp_sim::check_K_criterion(), alp_sim::check_K_criterion_during_killing(), array< time_point, eSize >::increase_elem_by_1(), and array< time_point, eSize >::set_elem().

d_elem

template<typename T >

T* array< T >::d_elem

Definition at line 252 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array(), alp_sim::check_K_criterion(), alp_sim::check_K_criterion_during_killing(), array< time_point, eSize >::increase_elem_by_1(), alp::restore_state(), alp::save_state(), and array< time_point, eSize >::set_elem().

d_ind0

template<typename T >

Int4 array< T >::d_ind0

Definition at line 250 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array(), alp_sim::check_K_criterion(), alp_sim::check_K_criterion_during_killing(), array< time_point, eSize >::increase_elem_by_1(), alp::restore_state(), alp::save_state(), and array< time_point, eSize >::set_elem().

d_step

template<typename T >

Int4 array< T >::d_step

Definition at line 248 of file sls_alp_data.hpp.

Referenced by array< time_point, eSize >::array().

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The documentation for this class was generated from the following file:

• src/algo/blast/gumbel_params/sls_alp_data.hpp