Search Toolkit Book for array_positive
#include "sls_alp_data.hpp"
(Private to src/algo/blast/gumbel_params.)
Inheritance diagram for array_positive< T >:
Collaboration diagram for array_positive< T >:
Public Member Functions | |
| array_positive (alp_data *alp_data_) | |
| ~array_positive () | |
| void | increment_array () |
| void | set_elem (Int4 ind_, T elem_) |
| void | increase_elem_by_1 (Int4 ind_) |
| void | increase_elem_by_x (Int4 ind_, T x_) |
Public Attributes | |
| Int4 | d_step |
| Int4 | d_dim |
| T * | d_elem |
| alp_data * | d_alp_data |
Detailed Description
template<typename T>
class array_positive< T >
Definition at line 127 of file sls_alp_data.hpp.
Constructor & Destructor Documentation
◆ array_positive()
|
inline |
Definition at line 129 of file sls_alp_data.hpp.
◆ ~array_positive()
| array_positive< T >::~array_positive |
Definition at line 647 of file sls_alp_data.hpp.
Member Function Documentation
◆ increase_elem_by_1()
|
inline |
Definition at line 159 of file sls_alp_data.hpp.
◆ increase_elem_by_x()
|
inline |
Definition at line 170 of file sls_alp_data.hpp.
Referenced by alp_sim::check_K_criterion(), and alp_sim::check_K_criterion_during_killing().
◆ increment_array()
| void array_positive< T >::increment_array |
Definition at line 659 of file sls_alp_data.hpp.
References alp_data::assert_mem(), error::error_code, i, mb_bytes, NULL, error::st, and T.
Referenced by array_positive< state * >::increase_elem_by_1(), array_positive< state * >::increase_elem_by_x(), and array_positive< state * >::set_elem().
◆ set_elem()
|
inline |
Definition at line 147 of file sls_alp_data.hpp.
Referenced by alp_sim::alp_sim(), alp_sim::get_minimal_simulation(), alp::increment_H_weights(), alp::increment_H_weights_with_sentinels(), alp::increment_W_weights(), alp::simulate_next_alp(), and alp_sim::the_criterion().
Member Data Documentation
◆ d_alp_data
| alp_data* array_positive< T >::d_alp_data |
Definition at line 189 of file sls_alp_data.hpp.
Referenced by array_positive< state * >::array_positive(), alp_sim::get_minimal_simulation(), and alp_sim::kill().
◆ d_dim
| Int4 array_positive< T >::d_dim |
Definition at line 187 of file sls_alp_data.hpp.
Referenced by array_positive< state * >::array_positive(), alp_sim::check_K_criterion(), alp_sim::check_K_criterion_during_killing(), array_positive< state * >::increase_elem_by_1(), array_positive< state * >::increase_elem_by_x(), and array_positive< state * >::set_elem().
◆ d_elem
| T* array_positive< T >::d_elem |
Definition at line 188 of file sls_alp_data.hpp.
Referenced by alp_sim::alp_sim(), array_positive< state * >::array_positive(), alp_sim::calculate_C(), alp_sim::calculate_FSC(), alp_sim::calculate_lambda(), alp_sim::check_K_criterion(), alp_sim::check_K_criterion_during_killing(), alp_sim::function_for_lambda_calculation(), alp_sim::get_and_allocate_alp_distribution(), alp_sim::get_minimal_simulation(), array_positive< state * >::increase_elem_by_1(), array_positive< state * >::increase_elem_by_x(), alp::increment_H_weights(), alp::increment_H_weights_with_sentinels(), alp_sim::kill(), alp::kill_upto_level(), alp::partially_release_memory(), alp_sim::randomize_realizations_ind(), array_positive< state * >::set_elem(), alp::simulate_alp_upto_the_given_level(), alp::~alp(), and alp_sim::~alp_sim().
◆ d_step
| Int4 array_positive< T >::d_step |
Definition at line 186 of file sls_alp_data.hpp.
Referenced by array_positive< state * >::array_positive().
The documentation for this class was generated from the following file:
- src/algo/blast/gumbel_params/sls_alp_data.hpp
