cuCdCore.cpp File Reference

#include <ncbi_pch.hpp>
#include <algorithm>
#include <objects/biblio/PubMedId.hpp>
#include <objects/pub/Pub.hpp>
#include <algo/structure/cd_utils/cuSort.hpp>
#include <algo/structure/cd_utils/cuCdCore.hpp>
#include <algo/structure/cd_utils/cuAlign.hpp>
#include <algo/structure/cd_utils/cuCD.hpp>
#include <algo/structure/cd_utils/cuSequence.hpp>
#include <algo/structure/cd_utils/cuUtils.hpp>
#include <stdio.h>

Include dependency graph for cuCdCore.cpp:

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Functions
	USING_SCOPE (objects)
int	intSortRowsFunction (void *pVal, int i, int j)

Variables
const CRef< CSeq_align >	EMPTY_CREF_SEQALIGN
const CRef< CSeq_annot >	EMPTY_CREF_SEQANNOT

Function Documentation

intSortRowsFunction()

int intSortRowsFunction	(	void *	pVal,
		int	i,
		int	j
	)

Definition at line 949 of file cuCdCore.cpp.

References i.

Referenced by CCdCore::EraseTheseRows().

USING_SCOPE()

USING_SCOPE

(

objects

)

Variable Documentation

EMPTY_CREF_SEQALIGN

const CRef<CSeq_align> EMPTY_CREF_SEQALIGN

Definition at line 59 of file cuCdCore.cpp.

Referenced by CCdCore::GetSeqAlign().

EMPTY_CREF_SEQANNOT

const CRef<CSeq_annot> EMPTY_CREF_SEQANNOT

Definition at line 60 of file cuCdCore.cpp.

Referenced by CCdCore::GetAlignment().