NCBI C++ ToolKit
Functions | Variables
cuUtils.hpp File Reference
#include <corelib/ncbiargs.hpp>
#include <corelib/ncbienv.hpp>
#include <corelib/ncbistre.hpp>
#include <algo/structure/cd_utils/cuCdCore.hpp>
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 USING_SCOPE (objects)
string GetSeqIDStr (const CRef< CSeq_id > &SeqID)
string Make_SeqID_String (const CRef< CSeq_id > SeqID, bool Pad, int Len)
void Make_GI_or_PDB_String_CN3D (const CRef< CSeq_id > SeqID, std::string &Str)
string CddIdString (const CCdd &cdd)
string CddIdString (const CCdd_id &id)
bool SameCDAccession (const CCdd_id &id1, const CCdd_id &id2)
bool Prosite2Regex (const std::string &prosite, std::string *regex, std::string *errString)


const int CDTreeColorCycle []
const int kNumColorsInCDTreeColorCycle

Function Documentation

◆ CddIdString() [1/2]

string CddIdString ( const CCdd cdd)

Definition at line 152 of file cuUtils.cpp.

References CCdd_id_set_Base::Get(), CCdd_Base::GetId(), and i.

◆ CddIdString() [2/2]

string CddIdString ( const CCdd_id id)

Definition at line 168 of file cuUtils.cpp.

References CCdd_id_Base::e_Gid, CCdd_id_Base::e_Uid, and NStr::IntToString().

◆ GetSeqIDStr()

string GetSeqIDStr ( const CRef< CSeq_id > &  SeqID)

◆ Make_GI_or_PDB_String_CN3D()

void Make_GI_or_PDB_String_CN3D ( const CRef< CSeq_id SeqID,
std::string Str 

◆ Make_SeqID_String()

string Make_SeqID_String ( const CRef< CSeq_id SeqID,
bool  Pad,
int  Len 

◆ Prosite2Regex()

bool Prosite2Regex ( const std::string prosite,
std::string regex,
std::string errString 

◆ SameCDAccession()

bool SameCDAccession ( const CCdd_id id1,
const CCdd_id id2 


USING_SCOPE ( objects  )

Variable Documentation

◆ CDTreeColorCycle

const int CDTreeColorCycle[]

Definition at line 55 of file cuUtils.cpp.

◆ kNumColorsInCDTreeColorCycle

const int kNumColorsInCDTreeColorCycle

Definition at line 73 of file cuUtils.cpp.

Modified on Wed Feb 21 09:58:35 2024 by rev. 669887