NCBI C++ ToolKit
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Files | |
file | blast_args.hpp [code] |
Interface for converting blast-related command line arguments into blast options. | |
file | blast_asn1_input.hpp [code] |
file | blast_fasta_input.hpp [code] |
Interface for reading SRA sequences into blast input. | |
file | blast_input.hpp [code] |
Interface for converting sources of sequence data into blast sequence input. | |
file | blast_input_aux.hpp [code] |
Auxiliary classes/functions for BLAST input library. | |
file | blast_scope_src.hpp [code] |
Declares CBlastScopeSource class to create properly configured CScope objects to invoke the BLAST database data loader first and fall back on to the Genbank data loader if the former fails (this is configurable at runtime). | |
file | blastn_args.hpp [code] |
Main argument class for BLASTN application. | |
file | blastp_args.hpp [code] |
Main argument class for BLASTP application. | |
file | blastx_args.hpp [code] |
Main argument class for BLASTX application. | |
file | cmdline_flags.hpp [code] |
Constant declarations for command line arguments for BLAST programs. | |
file | deltablast_args.hpp [code] |
Main argument class for DELTA-BLAST application. | |
file | igblastn_args.hpp [code] |
Main argument class for IGBLASTN application. | |
file | igblastp_args.hpp [code] |
Main argument class for IGBLASTP application. | |
file | kblastp_args.hpp [code] |
Main argument class for KBLASTP application. | |
file | magicblast_args.hpp [code] |
file | psiblast_args.hpp [code] |
Main argument class for PSI-BLAST application. | |
file | rmblastn_args.hpp [code] |
Main argument class for RMBLASTN application. | |
file | rpsblast_args.hpp [code] |
Main argument class for RPSBLAST application. | |
file | rpstblastn_args.hpp [code] |
Main argument class for RPS TBLASTN application. | |
file | tblastn_args.hpp [code] |
Main argument class for TBLASTN application. | |
file | tblastx_args.hpp [code] |
Main argument class for TBLASTX application. | |