editing_action_features.hpp File Reference

#include <corelib/ncbistd.hpp>
#include <objects/seqfeat/Seq_feat.hpp>
#include <objects/seqfeat/RNA_qual.hpp>
#include <objects/seqfeat/Gb_qual.hpp>
#include <objects/seqfeat/Code_break.hpp>
#include <objects/seqfeat/Genetic_code_table.hpp>
#include <objmgr/seq_entry_handle.hpp>
#include <objmgr/seq_feat_handle.hpp>
#include <gui/objutils/macro_fn_do.hpp>
#include <objtools/cleanup/capitalization_string.hpp>
#include <gui/packages/pkg_sequence_edit/seqtable_util.hpp>
#include <gui/widgets/edit/field_name_panel.hpp>

Include dependency graph for editing_action_features.hpp:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Go to the SVN repository for this file.

Classes
class	IEditingActionFeat
class	CEditingActionFeatComment
class	CEditingActionFeatException
class	CEditingActionFeatGbQual
class	CEditingActionFeatGbQualTwoNames
class	CEditingActionFeatDualVal1
class	CEditingActionFeatDualVal2
class	CEditingActionFeatDbxref
class	CEditingActionFeatEvidence
class	CEditingActionFeatPseudo
class	CEditingActionFeatCodonsRecognized
class	CEditingActionFeatAnticodon
class	CEditingActionFeatTranslExcept
class	CEditingActionFeatRnaQual
class	CEditingActionFeatRegion
class	CEditingActionFeatCodonStart
class	CEditingActionFeatTranslTable
class	CEditingActionFeatDesc
class	CEditingActionFeatNcRnaClass
class	CEditingActionFeatLocus_tag
class	CEditingActionFeatMaploc
class	CEditingActionFeatSynonym
class	CEditingActionFeatAllele
class	CEditingActionFeatActivity
class	CEditingActionFeatPartial
class	CEditingActionFeatTranslation
class	CEditingActionFeatEcNumber
class	CEditingActionFeatFunction
class	CEditingActionFeatProduct
class	CEditingActionFeatGeneLocus
class	CEditingActionFeatGeneLocusPlain
class	CEditingActionFeatGeneLocusRna
class	CEditingActionFeatGeneLocusCdsGeneProt
class	CEditingActionFeatRnaToGeneDesc
class	CEditingActionFeatRnaToGeneMaploc
class	CEditingActionFeatRnaToGeneLocus_tag
class	CEditingActionFeatRnaToGeneSynonym
class	CEditingActionFeatRnaToGeneComment
class	CEditingActionFeatTranscriptId

Functions
	USING_SCOPE (objects)
IEditingActionFeat *	CreateActionFeat (CSeq_entry_Handle seh, string field, const CSeqFeatData::ESubtype subtype, const CSeqFeatData::E_Choice feat_type, const string &ncRNA_class)
IEditingActionFeat *	CreateActionRna (CSeq_entry_Handle seh, string field, const CSeqFeatData::ESubtype subtype, const string &ncRNA_class)
IEditingActionFeat *	CreateActionCdsGeneProt (CSeq_entry_Handle seh, string field, const CSeqFeatData::ESubtype subtype, const string &ncRNA_class=kEmptyStr)

Function Documentation

CreateActionCdsGeneProt()

IEditingActionFeat* CreateActionCdsGeneProt	(	CSeq_entry_Handle	seh,
		string	field,
		const CSeqFeatData::ESubtype	subtype,
		const string &	ncRNA_class = kEmptyStr
	)

Definition at line 4084 of file editing_action_features.cpp.

References CSeqFeatData::GetTypeFromSubtype(), NULL, and NStr::ToLower().

Referenced by CreateAction().

CreateActionFeat()

IEditingActionFeat* CreateActionFeat	(	CSeq_entry_Handle	seh,
		string	field,
		const CSeqFeatData::ESubtype	subtype,
		const CSeqFeatData::E_Choice	feat_type,
		const string &	ncRNA_class
	)

Definition at line 3917 of file editing_action_features.cpp.

References NULL, and NStr::ToLower().

Referenced by CreateAction(), and CreateActionRna().

CreateActionRna()

IEditingActionFeat* CreateActionRna	(	CSeq_entry_Handle	seh,
		string	field,
		const CSeqFeatData::ESubtype	subtype,
		const string &	ncRNA_class
	)

Definition at line 4063 of file editing_action_features.cpp.

References CreateActionFeat(), CSeqFeatData_Base::e_Rna, and NStr::ToLower().

Referenced by CreateAction().

USING_SCOPE()

USING_SCOPE

(

objects

)