entrez_conversion.cpp File Reference

#include <ncbi_pch.hpp>
#include <gui/objutils/entrez_conversion.hpp>
#include <corelib/ncbitime.hpp>
#include <util/static_map.hpp>
#include <gui/objutils/label.hpp>
#include <gui/objutils/utils.hpp>
#include <gui/objutils/gui_eutils_client.hpp>

Include dependency graph for entrez_conversion.cpp:

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Classes
class	CXmlNodeObjectLabelHandler

Typedefs
typedef SStaticPair< const char *, const char * >	TPair
typedef CStaticPairArrayMap< const char *, const char *, PNocase_CStr >	TEntrezDbMap
typedef CStaticPairArrayMap< const char *, const char *, PNocase_CStr >	TGenomeLinkMap

Functions
	USING_SCOPE (objects)
	DEFINE_STATIC_ARRAY_MAP (TEntrezDbMap, sc_EntrezDbMap, sc_Dbs)
	DEFINE_STATIC_ARRAY_MAP (TGenomeLinkMap, sc_GenomeLinkMap, sc_Pairs)

Variables
static const TPair	sc_Dbs []
static const TPair	sc_Pairs []

Typedef Documentation

TEntrezDbMap

typedef CStaticPairArrayMap<const char*, const char*, PNocase_CStr> TEntrezDbMap

Definition at line 50 of file entrez_conversion.cpp.

TGenomeLinkMap

typedef CStaticPairArrayMap<const char*, const char*, PNocase_CStr> TGenomeLinkMap

Definition at line 62 of file entrez_conversion.cpp.

TPair

typedef SStaticPair<const char*, const char*> TPair

Definition at line 43 of file entrez_conversion.cpp.

Function Documentation

DEFINE_STATIC_ARRAY_MAP() [1/2]

DEFINE_STATIC_ARRAY_MAP	(	TEntrezDbMap	,
		sc_EntrezDbMap	,
		sc_Dbs
	)

DEFINE_STATIC_ARRAY_MAP() [2/2]

DEFINE_STATIC_ARRAY_MAP	(	TGenomeLinkMap	,
		sc_GenomeLinkMap	,
		sc_Pairs
	)

USING_SCOPE()

USING_SCOPE

(

objects

)

Variable Documentation

sc_Dbs

const TPair sc_Dbs[]

static

Initial value:

= {
    { "assembly",   "Genome Assembly" },
    { "gene",       "Gene" },
    { "nucleotide", "Nucleotide" },
    { "protein",    "Protein" },
}

Definition at line 44 of file entrez_conversion.cpp.

sc_Pairs

const TPair sc_Pairs[]

static

Initial value:

= {
    { "genomeprj_genome",          "Chromosomes" },
    { "genomeprj_nucleotide",      "Contigs" },
    { "genomeprj_nucleotide_mrna", "mRNAs" },
    { "genomeprj_nucleotide_wgs",  "Whole Genome Shotgun sequences" },
    { "genomeprj_organella",       "Organelles" },
    { "genomeprj_protein",         "Proteins" },
}

Definition at line 53 of file entrez_conversion.cpp.

Referenced by CLinkUtils::AddSequenceLinks(), and s_CleanCDDFeature().