feature_edit.cpp File Reference

#include <ncbi_pch.hpp>
#include <corelib/ncbistd.hpp>
#include <objmgr/mapped_feat.hpp>
#include <objmgr/util/feature_edit.hpp>
#include <objects/seqfeat/Cdregion.hpp>
#include <objects/seqfeat/Code_break.hpp>
#include <objects/seqfeat/Trna_ext.hpp>
#include <objects/seqfeat/RNA_ref.hpp>

Include dependency graph for feature_edit.cpp:

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Classes
struct	SOutsideRange

Functions
static TSeqPos	s_GetTrimmedLength (const CSeq_loc &trimmed_loc)
static TSeqPos	s_GetTrimmedLength (const CSeq_loc &loc, TSeqPos from, TSeqPos to)

Function Documentation

s_GetTrimmedLength() [1/2]

static TSeqPos s_GetTrimmedLength ( const CSeq_loc &  loc, TSeqPos  from, TSeqPos  to  )

static

Definition at line 323 of file feature_edit.cpp.

References CSeq_loc::fStrand_Ignore, CSeq_loc_CI::GetSeq_id(), CSeq_loc::Intersect(), Ref(), and s_GetTrimmedLength().

s_GetTrimmedLength() [2/2]

static TSeqPos s_GetTrimmedLength ( const CSeq_loc &  trimmed_loc )

static

Definition at line 285 of file feature_edit.cpp.

References CPacked_seqint_Base::Get(), CSeq_loc_mix_Base::Get(), CSeq_loc_Base::GetInt(), CSeq_interval::GetLength(), CSeq_loc_Base::GetMix(), CSeq_loc_Base::GetPacked_int(), CSeq_loc_Base::GetPacked_pnt(), CPacked_seqpnt_Base::GetPoints(), CSeq_loc_Base::IsEmpty(), CSeq_loc_Base::IsInt(), CSeq_loc_Base::IsMix(), CSeq_loc_Base::IsNull(), CSeq_loc_Base::IsPacked_int(), CSeq_loc_Base::IsPacked_pnt(), and CSeq_loc_Base::IsPnt().

Referenced by s_GetTrimmedLength(), and CFeatTrim::x_GetStartOffset().