#include <ncbi_pch.hpp>#include <algo/gnomon/gnomon.hpp>#include <algo/gnomon/chainer.hpp>#include <algo/gnomon/gnomon_exception.hpp>#include <algo/gnomon/id_handler.hpp>#include "hmm.hpp"#include "hmm_inlines.hpp"#include <objects/seqloc/Seq_loc.hpp>#include <objects/seqloc/Seq_id.hpp>#include <objects/seqloc/Packed_seqint.hpp>#include <objects/seqloc/Seq_interval.hpp>#include <objects/seqfeat/Seq_feat.hpp>#include <objects/seqfeat/RNA_ref.hpp>#include <objects/seqfeat/Cdregion.hpp>#include <objmgr/util/sequence.hpp>#include <objects/seqalign/seqalign__.hpp>#include <objects/general/general__.hpp>#include <objmgr/object_manager.hpp>#include <stdio.h>#include <functional>
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Functions | |
| USING_SCOPE (ncbi::objects) | |
| void | debug () |
| Int8 | GetModelId (const CSeq_align &seq_align) |
Function Documentation
◆ debug()
| void debug | ( | ) |
Definition at line 61 of file gnomon_objmgr.cpp.
Referenced by CConfig::ConvertRegToTree(), CPythonDiagHandler::CPythonDiagHandler(), dns_cname(), CGridCommandLineInterfaceApp::Run(), CLogLatencies::SetDebug(), CUpwardTreeFiller::SetDebugMode(), and CDownwardTreeFiller::SetDebugMode().
◆ GetModelId()
| Int8 GetModelId | ( | const CSeq_align & | seq_align | ) |
Definition at line 65 of file gnomon_objmgr.cpp.
References CSeq_align_Base::CanGetId(), and CSeq_align_Base::GetId().
◆ USING_SCOPE()
| USING_SCOPE | ( | ncbi::objects | ) |
