NCBI C++ ToolKit
graph_utils.hpp
Go to the documentation of this file.

Go to the SVN repository for this file.

1 #ifndef GUI_WIDGETS_SEQ_GRAPHIC___GRAPH_UTILS__HPP
2 #define GUI_WIDGETS_SEQ_GRAPHIC___GRAPH_UTILS__HPP
3 
4 /* $Id: graph_utils.hpp 35915 2016-07-11 15:01:10Z katargir $
5  * ===========================================================================
6  *
7  * PUBLIC DOMAIN NOTICE
8  * National Center for Biotechnology Information
9  *
10  * This software/database is a "United States Government Work" under the
11  * terms of the United States Copyright Act. It was written as part of
12  * the author's official duties as a United States Government employee and
13  * thus cannot be copyrighted. This software/database is freely available
14  * to the public for use. The National Library of Medicine and the U.S.
15  * Government have not placed any restriction on its use or reproduction.
16  *
17  * Although all reasonable efforts have been taken to ensure the accuracy
18  * and reliability of the software and data, the NLM and the U.S.
19  * Government do not and cannot warrant the performance or results that
20  * may be obtained by using this software or data. The NLM and the U.S.
21  * Government disclaim all warranties, express or implied, including
22  * warranties of performance, merchantability or fitness for any particular
23  * purpose.
24  *
25  * Please cite the author in any work or product based on this material.
26  *
27  * ===========================================================================
28  *
29  * Author: Liangshou Wu
30  *
31  */
32 
33  /**
34  * File Description:
35  */
36 
37 #include <corelib/ncbistr.hpp>
38 
40 
42 class CSeq_loc;
43 class CScope;
45 
47 {
48 public:
49  static void CalcGraphLevels(const string& annotName, objects::CScope& scope, const objects::CSeq_loc& loc, set<int>& levels);
50  /// @name help methods about coverage graph levels.
51  /// @{
52  /// Return the nearest level available for a given zoom level.
53  /// @param zoom is measured as number of bases per screen pixel
54  /// Initialize levels on which coverage graphs are avaiable.
55  /// @param annot the original annotation name
56  static int GetNearestLevel(const set<int>& levels, double zoom);
57 };
58 
60 
61 #endif // GUI_WIDGETS_SEQ_GRAPHIC___GRAPH_UTILS__HPP
CScope –.
Definition: scope.hpp:92
The NCBI C++ standard methods for dealing with std::string.
#define END_NCBI_SCOPE
End previously defined NCBI scope.
Definition: ncbistl.hpp:103
#define END_SCOPE(ns)
End the previously defined scope.
Definition: ncbistl.hpp:75
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Definition: ncbistl.hpp:100
#define BEGIN_SCOPE(ns)
Define a new scope.
Definition: ncbistl.hpp:72
Modified on Wed Apr 17 13:08:07 2024 by modify_doxy.py rev. 669887