NCBI C++ ToolKit
Macros | Functions | Variables
graphread.cpp File Reference
#include <ncbi_pch.hpp>
#include <sra/readers/sra/graphread.hpp>
#include <sra/readers/ncbi_traces_path.hpp>
#include <corelib/ncbistr.hpp>
#include <corelib/ncbi_param.hpp>
#include <objects/general/general__.hpp>
#include <objects/seq/seq__.hpp>
#include <objects/seqset/seqset__.hpp>
#include <objects/seqloc/seqloc__.hpp>
#include <objects/seqalign/seqalign__.hpp>
#include <objects/seqres/seqres__.hpp>
#include <objects/seqtable/seqtable__.hpp>
#include <serial/objistrasnb.hpp>
#include <serial/serial.hpp>
#include <sra/error_codes.hpp>
#include <sra/readers/sra/kdbread.hpp>
+ Include dependency graph for graphread.cpp:

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Macros

#define NCBI_USE_ERRCODE_X   VDBGraphReader
 

Functions

 NCBI_DEFINE_ERR_SUBCODE_X (1)
 
 BEGIN_NAMESPACE (objects)
 
 NCBI_PARAM_DECL (bool, VDBGRAPH, USE_VDB_INDEX)
 
 NCBI_PARAM_DEF_EX (bool, VDBGRAPH, USE_VDB_INDEX, true, eParam_NoThread, VDBGRAPH_USE_VDB_INDEX)
 
template<class DstVector , class SrcVector >
static void sx_Assign (DstVector &dst, const SrcVector &src)
 
 END_NAMESPACE (objects)
 

Variables

 BEGIN_NCBI_NAMESPACE
 
 END_NCBI_NAMESPACE
 

Macro Definition Documentation

◆ NCBI_USE_ERRCODE_X

#define NCBI_USE_ERRCODE_X   VDBGraphReader

Definition at line 53 of file graphread.cpp.

Function Documentation

◆ BEGIN_NAMESPACE()

BEGIN_NAMESPACE ( objects  )

◆ END_NAMESPACE()

END_NAMESPACE ( objects  )

◆ NCBI_DEFINE_ERR_SUBCODE_X()

NCBI_DEFINE_ERR_SUBCODE_X ( )

◆ NCBI_PARAM_DECL()

NCBI_PARAM_DECL ( bool  ,
VDBGRAPH  ,
USE_VDB_INDEX   
)

◆ NCBI_PARAM_DEF_EX()

NCBI_PARAM_DEF_EX ( bool  ,
VDBGRAPH  ,
USE_VDB_INDEX  ,
true  ,
eParam_NoThread  ,
VDBGRAPH_USE_VDB_INDEX   
)

◆ sx_Assign()

template<class DstVector , class SrcVector >
static void sx_Assign ( DstVector &  dst,
const SrcVector &  src 
)
static

Definition at line 363 of file graphread.cpp.

References ITERATE.

Referenced by CVDBGraphSeqIterator::x_MakeGraph().

Variable Documentation

◆ BEGIN_NCBI_NAMESPACE

BEGIN_NCBI_NAMESPACE

Definition at line 51 of file graphread.cpp.

◆ END_NCBI_NAMESPACE

END_NCBI_NAMESPACE

Definition at line 875 of file graphread.cpp.

Modified on Sun Jun 16 04:35:33 2024 by modify_doxy.py rev. 669887