Collaboration diagram for C/C++ Toolkit Bridge:

Classes
struct	_nlm_mem_map

struct	substringdata

struct	fci_t

Macros
#define	E_NoMemory 1

#define	E_Programmer 999

#define	MSG_OK SEV_ERROR

#define	ErrPostStr ErrPostEx

#define	ErrSetLog SetLogFile

#define	ErrPostEx(sev, err_code, ...)

#define	Nlm_Message(key, ...) ErrPostEx((ErrSev)key, 0, __VA_ARGS__)

#define	BEGIN_CTRANSITION_SCOPE BEGIN_SCOPE(CTRANSITION_NS)

#define	END_CTRANSITION_SCOPE END_SCOPE(CTRANSITION_NS)

#define	USING_CTRANSITION_SCOPE USING_SCOPE(CTRANSITION_NS)

#define	OS_UNIX

#define	OS_MSWIN

#define	COMP_GNU

#define	PROTO(x) x

#define	VPROTO(x) x

#define	INLINE inline

#define	Nlm_Malloc malloc

#define	Nlm_Calloc calloc

#define	Nlm_Realloc realloc

#define	Nlm_Free free

#define	Nlm_MemSet memset

#define	Nlm_MemCpy memcpy

#define	Nlm_MemChr memchr

#define	Nlm_MemCmp memcmp

#define	Malloc Nlm_Malloc

#define	Calloc Nlm_Calloc

#define	Realloc Nlm_Realloc

#define	Free Nlm_Free

#define	MemSet Nlm_MemSet

#define	MemCpy Nlm_MemCpy

#define	MemChr Nlm_MemChr

#define	MemCmp Nlm_MemCmp

#define	MemSearch Nlm_MemSearch

#define	Nlm_HandNew(a) Nlm_MemNew(a)

#define	Nlm_HandGet(a, b) Nlm_MemGet(a,b)

#define	Nlm_HandMore(a, b) Nlm_MemMore(a,b)

#define	Nlm_HandFree(a) Nlm_MemFree(a)

#define	Nlm_HandLock(a) (a)

#define	Nlm_HandUnlock(a) NULL

#define	MemNew(x) Nlm_MemGet(x,MGET_CLEAR\|MGET_ERRPOST)

#define	MemGet(x, y) Nlm_MemGet(x,(unsigned int)(y))

#define	MemFree Nlm_MemFree

#define	MemMore Nlm_MemMore

#define	MemExtend Nlm_MemExtend

#define	MemCopy Nlm_MemCopy

#define	MemMove Nlm_MemMove

#define	MemFill Nlm_MemFill

#define	MemDup Nlm_MemDup

#define	HandNew Nlm_HandNew

#define	HandGet Nlm_HandGet

#define	HandMore Nlm_HandMore

#define	HandFree Nlm_HandFree

#define	HandLock Nlm_HandLock

#define	HandUnlock Nlm_HandUnlock

#define	dll_Malloc(x) (void*) Nlm_Malloc(x)

#define	dll_Free(x) Nlm_Free((void*) (x))

#define	MGET_CLEAR 0x0001

#define	MGET_ERRPOST 0x0004

#define	MG_CLEAR MGET_CLEAR

#define	MG_MAXALLOC 0x0002

#define	MG_ERRPOST MGET_ERRPOST

#define	Nlm_Int8 Nlm_Int4

#define	Nlm_Int8Ptr Nlm_Int4Ptr

#define	Nlm_Uint8 Nlm_Uint4

#define	Nlm_Uint8Ptr Nlm_Uint4Ptr

#define	INT8_MIN INT4_MIN

#define	INT8_MAX INT4_MAX

#define	UINT8_MAX UINT4_MAX

#define	Int8 Nlm_Int8

#define	Uint8 Nlm_Uint8

#define	Int8Ptr Nlm_Int8Ptr

#define	Uint8Ptr Nlm_Uint8Ptr

#define	LITTLE_ENDIAN 1234

#define	BIG_ENDIAN 4321

#define	OTHER_ENDIAN 0

#define	BYTE_ORDER OTHER_ENDIAN

#define	INLINE

#define	PNTR *

#define	HNDL *

#define	FnPtr Nlm_FnPtr

#define	VoidPtr Nlm_VoidPtr

#define	Pointer Nlm_VoidPtr

#define	Handle Nlm_Handle

#define	Char Nlm_Char

#define	CharPtr Nlm_CharPtr

#define	Uchar Nlm_Uchar

#define	UcharPtr Nlm_UcharPtr

#define	Boolean Nlm_Boolean

#define	BoolPtr Nlm_BoolPtr

#define	Byte Nlm_Byte

#define	BytePtr Nlm_BytePtr

#define	BYTE_MAX UCHAR_MAX

#define	Int1 Nlm_Int1

#define	Int1Ptr Nlm_Int1Ptr

#define	INT1_MIN SCHAR_MIN

#define	INT1_MAX SCHAR_MAX

#define	Uint1 Nlm_Uint1

#define	Uint1Ptr Nlm_Uint1Ptr

#define	UINT1_MAX UCHAR_MAX

#define	Int2 Nlm_Int2

#define	Int2Ptr Nlm_Int2Ptr

#define	INT2_MIN SHRT_MIN

#define	INT2_MAX SHRT_MAX

#define	Uint2 Nlm_Uint2

#define	Uint2Ptr Nlm_Uint2Ptr

#define	UINT2_MAX USHRT_MAX

#define	Int4 Nlm_Int4

#define	Int4Ptr Nlm_Int4Ptr

#define	INT4_MIN (-2147483647-1)

#define	INT4_MAX 2147483647

#define	Uint4 Nlm_Uint4

#define	Uint4Ptr Nlm_Uint4Ptr

#define	UINT4_MAX 4294967295U

#define	TIME_MAX ULONG_MAX

#define	FloatLo Nlm_FloatLo

#define	FloatLoPtr Nlm_FloatLoPtr

#define	FloatHi Nlm_FloatHi

#define	FloatHiPtr Nlm_FloatHiPtr

#define	BigScalar long

#define	SIZE_MAX MAXALLOC

#define	PATH_MAX FILENAME_MAX

#define	NULL ((void *)0)

#define	NULLB '\0'

#define	TRUE ((Nlm_Boolean)1)

#define	FALSE ((Nlm_Boolean)0)

#define	MIN(a, b) ((a)>(b)?(b):(a))

#define	MAX(a, b) ((a)>=(b)?(a):(b))

#define	ABS(a) ((a)>=0?(a):-(a))

#define	SIGN(a) ((a)>0?1:((a)<0?-1:0))

#define	ROUNDUP(A, B) (((A)%(B)) != 0 ? (A)+(B)-((A)%(B)) : (A))

#define	DIM(A) (sizeof(A)/sizeof((A)[0]))

#define	LN2 (0.693147180559945)

#define	LN10 (2.302585092994046)

#define	NEAR

#define	FAR

#define	CDECL

#define	PASCAL

#define	EXPORT

#define	NLM_EXTERN

#define	LIBCALL FAR PASCAL

#define	LIBCALLBACK FAR PASCAL

#define	StringPrintable Nlm_StringPrintable

#define	text2stream Nlm_text2stream

#define	stream2text Nlm_stream2text

#define	enumRuleLine Nlm_enumRuleLine

#define	rule_line Nlm_rule_line

#define	Nlm_StrLen strlen

#define	Nlm_StrCpy strcpy

#define	Nlm_StrNCpy strncpy

#define	Nlm_StrCat strcat

#define	Nlm_StrNCat strncat

#define	Nlm_StrCmp strcmp

#define	Nlm_StrNCmp strncmp

#define	Nlm_StrChr strchr

#define	Nlm_StrRChr strrchr

#define	Nlm_StrCSpn strcspn

#define	Nlm_StrNSet strnset

#define	Nlm_StrPBrk strpbrk

#define	Nlm_StrSet strset

#define	Nlm_StrSpn strspn

#define	Nlm_StrStr strstr

#define	Nlm_StrTok strtok

#define	StrLen Nlm_StrLen

#define	StrCpy Nlm_StrCpy

#define	StrNCpy Nlm_StrNCpy

#define	StrCat Nlm_StrCat

#define	StrNCat Nlm_StrNCat

#define	StrCmp Nlm_StrCmp

#define	StrNCmp Nlm_StrNCmp

#define	StrICmp Nlm_StrICmp

#define	StrNICmp Nlm_StrNICmp

#define	StrIPCmp Nlm_StrIPCmp

#define	StrNIPCmp Nlm_StrNIPCmp

#define	StrChr Nlm_StrChr

#define	StrRChr Nlm_StrRChr

#define	StrCSpn Nlm_StrCSpn

#define	StrNSet Nlm_StrNSet

#define	StrPBrk Nlm_StrPBrk

#define	StrSet Nlm_StrSet

#define	StrSpn Nlm_StrSpn

#define	StrStr Nlm_StrStr

#define	StrTok Nlm_StrTok

#define	StrMove Nlm_StrMove

#define	StrSave Nlm_StrSave

#define	StrCnt Nlm_StrCnt

#define	StrUpper Nlm_StrUpper

#define	StrLower Nlm_StrLower

#define	StringLen Nlm_StringLen

#define	StringCpy Nlm_StringCpy

#define	StringNCpy Nlm_StringNCpy

#define	StringNCpy_0 Nlm_StringNCpy_0

#define	StringCat Nlm_StringCat

#define	StringNCat Nlm_StringNCat

#define	StringCmp Nlm_StringCmp

#define	StringNCmp Nlm_StringNCmp

#define	StringICmp Nlm_StringICmp

#define	StringNICmp Nlm_StringNICmp

#define	StringChr Nlm_StringChr

#define	StringRChr Nlm_StringRChr

#define	StringPBrk Nlm_StringPBrk

#define	StringSpn Nlm_StringSpn

#define	StringCSpn Nlm_StringCSpn

#define	StringStr Nlm_StringStr

#define	StringTok Nlm_StringTok

#define	StringTokMT Nlm_StringTokMT

#define	StringMove Nlm_StringMove

#define	StringSave Nlm_StringSave

#define	StringSaveNoNull Nlm_StringSaveNoNull

#define	StringCnt Nlm_StringCnt

#define	StringUpper Nlm_StringUpper

#define	StringLower Nlm_StringLower

#define	NaturalStringCmp Nlm_NaturalStringCmp

#define	NaturalStringICmp Nlm_NaturalStringICmp

#define	MeshStringICmp Nlm_MeshStringICmp

#define	StringSearch Nlm_StringSearch

#define	StringISearch Nlm_StringISearch

#define	StringHasNoText Nlm_StringHasNoText

#define	StringDoesHaveText Nlm_StringDoesHaveText

#define	TrimSpacesAroundString Nlm_TrimSpacesAroundString

#define	CompressSpaces Nlm_CompressSpaces

#define	LabelCopy Nlm_LabelCopy

#define	LabelCopyExtra Nlm_LabelCopyExtra

#define	StringIsAllDigits Nlm_StringIsAllDigits

#define	StringIsAllUpperCase Nlm_StringIsAllUpperCase

#define	StringIsAllLowerCase Nlm_StringIsAllLowerCase

#define	StringIsAllPunctuation Nlm_StringIsAllPunctuation

#define	SubStringData Nlm_SubStringData

#define	SubStringDataPtr Nlm_SubStringDataPtr

#define	SetupSubString Nlm_SetupSubString

#define	SearchSubString Nlm_SearchSubString

#define	IS_DIGIT(c) ('0'<=(c) && (c)<='9')

#define	IS_UPPER(c) ('A'<=(c) && (c)<='Z')

#define	IS_LOWER(c) ('a'<=(c) && (c)<='z')

#define	IS_ALPHA(c) (IS_UPPER(c) \|\| IS_LOWER(c))

#define	TO_LOWER(c) ((Nlm_Char)(IS_UPPER(c) ? (c)+' ' : (c)))

#define	TO_UPPER(c) ((Nlm_Char)(IS_LOWER(c) ? (c)-' ' : (c)))

#define	IS_WHITESP(c) (((c) == ' ') \|\| ((c) == '\n') \|\| ((c) == '\r') \|\| ((c) == '\t'))

#define	IS_ALPHANUM(c) (IS_ALPHA(c) \|\| IS_DIGIT(c))

#define	IS_PRINT(c) (' '<=(c) && (c)<='~')

#define	FCI_READ(_fci, _buf, _len) _fci->proc_buf(_fci->data,_buf,_len)

#define	FCI_CLOSE(_fci, _commit) { _fci->close(_fci->data,_commit); MemFree(_fci); }

Typedefs
typedef struct _nlm_mem_map	Nlm_MemMap

typedef struct _nlm_mem_map	Nlm_MemMapPtr

typedef int(*	Nlm_FnPtr) (void)

typedef void *	Nlm_VoidPtr

typedef void *	Nlm_Handle

typedef char	Nlm_Char

typedef char *	Nlm_CharPtr

typedef unsigned char	Nlm_Uchar

typedef unsigned char *	Nlm_UcharPtr

typedef unsigned char	Nlm_Boolean

typedef unsigned char *	Nlm_BoolPtr

typedef unsigned char	Nlm_Byte

typedef unsigned char *	Nlm_BytePtr

typedef signed char	Nlm_Int1

typedef signed char *	Nlm_Int1Ptr

typedef unsigned char	Nlm_Uint1

typedef unsigned char *	Nlm_Uint1Ptr

typedef short	Nlm_Int2

typedef short *	Nlm_Int2Ptr

typedef unsigned short	Nlm_Uint2

typedef unsigned short *	Nlm_Uint2Ptr

typedef signed int	Nlm_Int4

typedef signed int *	Nlm_Int4Ptr

typedef unsigned int	Nlm_Uint4

typedef unsigned int *	Nlm_Uint4Ptr

typedef float	Nlm_FloatLo

typedef float *	Nlm_FloatLoPtr

typedef double	Nlm_FloatHi

typedef double *	Nlm_FloatHiPtr

typedef struct substringdata	Nlm_SubStringData

typedef struct substringdata	Nlm_SubStringDataPtr

Enumerations
enum	ErrSev { SEV_NONE =0 , SEV_INFO , SEV_WARNING , SEV_ERROR , SEV_REJECT , SEV_FATAL , SEV_MAX , SEV_NONE = 0 , SEV_INFO , SEV_WARNING , SEV_ERROR , SEV_REJECT , SEV_FATAL , SEV_MAX }

enum	EMemMapAdvise { eMMA_Normal , eMMA_Random , eMMA_Sequential , eMMA_WillNeed , eMMA_DontNeed }

enum	Nlm_enumRuleLine { RL_Left , RL_Right , RL_Center , RL_Spread }

enum	Nlmzip_rc_t { NLMZIP_OKAY = 0 , NLMZIP_INVALIDPARAM = 1 , NLMZIP_BADCRC = 2 , NLMZIP_OUTSMALL = 3 , NLMZIP_NOMEMORY = 4 }

Functions
void	SetupCToolkitErrPost (void)

EDiagSev	CTOOLS_CToCxxSeverity (int c_severity)

int	CTOOLS_CxxToCSeverity (EDiagSev cxx_severity)

NCBI_NS_NCBI::Severity	ctransition_ErrSeverity (ErrSev sev)

std::string	ctransition_ErrMessage (const char *format,...)

BEGIN_CTRANSITION_SCOPE NLM_EXTERN void *LIBCALL	Nlm_MemNew (size_t size)

NLM_EXTERN void *LIBCALL	Nlm_MemGet (size_t size, unsigned int flags)

NLM_EXTERN void *LIBCALL	Nlm_MemMore (void *ptr, size_t size)

NLM_EXTERN void *LIBCALL	Nlm_MemExtend (void *ptr, size_t size, size_t oldsize)

NLM_EXTERN void *LIBCALL	Nlm_MemFree (void *ptr)

NLM_EXTERN void *LIBCALL	Nlm_MemCopy (void dst, const void src, size_t bytes)

NLM_EXTERN void *LIBCALL	Nlm_MemMove (void dst, const void src, size_t bytes)

NLM_EXTERN void *LIBCALL	Nlm_MemFill (void *ptr, int value, size_t bytes)

NLM_EXTERN void *LIBCALL	Nlm_MemDup (const void *orig, size_t size)

NLM_EXTERN size_t LIBCALL	Nlm_MemSearch (const void where, size_t where_size, const void what, size_t what_size)

NLM_EXTERN Nlm_Boolean	Nlm_SetHeapLimit (size_t curr, size_t add, size_t max)

NLM_EXTERN void *	Nlm_CallocViaMalloc (size_t n_elem, size_t item_size)

NLM_EXTERN Nlm_Boolean	Nlm_MemMapAvailable (void)

NLM_EXTERN Nlm_MemMapPtr	Nlm_MemMapInit (const Nlm_Char PNTR name)

NLM_EXTERN void	Nlm_MemMapFini (Nlm_MemMapPtr mem_mapp)

Nlm_Boolean	Nlm_MemMapAdvise (void *addr, size_t len, EMemMapAdvise advise)

Nlm_Boolean	Nlm_MemMapAdvisePtr (Nlm_MemMapPtr ptr, EMemMapAdvise advise)

BEGIN_CTRANSITION_SCOPE NLM_EXTERN int LIBCALL Nlm_StrICmp	PROTO ((const char FAR a, const char FAR b))

NLM_EXTERN int LIBCALL Nlm_StrNICmp	PROTO ((const char FAR a, const char FAR b, size_t max))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StrMove	PROTO ((char FAR to, const char FAR from))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StrSave	PROTO ((const char FAR *from))

NLM_EXTERN size_t LIBCALL Nlm_StrCnt	PROTO ((const char FAR str, const char FAR x_list))

NLM_EXTERN size_t LIBCALL Nlm_StringLen	PROTO ((const char *str))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringNCpy	PROTO ((char FAR to, const char FAR from, size_t max))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringChr	PROTO ((const char FAR *str, int chr))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringPBrk	PROTO ((const char FAR str1, const char FAR str2))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringTok	PROTO ((char FAR str1, const char FAR str2))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringTokMT	PROTO ((char FAR str1, const char FAR str2, char FAR **tmp))

NLM_EXTERN char *LIBCALL Nlm_StringUpper	PROTO ((char *string))

NLM_EXTERN int LIBCALL Nlm_NaturalStringCmp	PROTO ((Nlm_CharPtr str1, Nlm_CharPtr str2))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringSearch	PROTO ((const char FAR str, const char FAR sub))

NLM_EXTERN Nlm_Boolean LIBCALL Nlm_StringHasNoText	PROTO ((const char FAR *str))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_TrimSpacesAroundString	PROTO ((Nlm_CharPtr str))

NLM_EXTERN Nlm_Uint1Ptr LIBCALL	Uint8ToBytes (Nlm_Uint8 value)

NLM_EXTERN Nlm_Uint8 LIBCALL	BytesToUint8 (Nlm_Uint1Ptr bytes)

NLM_EXTERN Nlm_Int8 LIBCALL	Nlm_StringToInt8 (const char str, const char *endptr)

NLM_EXTERN Nlm_Uint8 LIBCALL	Nlm_StringToUint8 (const char str, const char *endptr)

NLM_EXTERN char *LIBCALL	Nlm_Int8ToString (Nlm_Int8 value, char *str, size_t str_size)

NLM_EXTERN char *LIBCALL	Nlm_Uint8ToString (Nlm_Uint8 value, char *str, size_t str_size)

NLM_EXTERN Nlm_Uint4 LIBCALL Nlm_LabelCopy	PROTO ((Nlm_CharPtr to, Nlm_CharPtr from, Nlm_Uint4 buflen))

NLM_EXTERN Nlm_Uint4 LIBCALL Nlm_LabelCopyExtra	PROTO ((Nlm_CharPtr to, Nlm_CharPtr from, Nlm_Uint4 buflen, Nlm_CharPtr prefix, Nlm_CharPtr suffix))

NLM_EXTERN void LIBCALL Nlm_LabelCopyNext	PROTO ((Nlm_CharPtr PNTR to, Nlm_CharPtr from, Nlm_Uint4 PNTR buflen))

NLM_EXTERN Nlm_CharPtr LIBCALL StrCpyPtr	PROTO ((char FAR Dest, char FAR Start, char FAR *Stop))

NLM_EXTERN Nlm_CharPtr LIBCALL StrDupPtr	PROTO ((char FAR Start, char FAR Stop))

NLM_EXTERN Nlm_CharPtr LIBCALL SkipSpaces	PROTO ((char FAR *Line))

NLM_EXTERN Nlm_CharPtr LIBCALL SkipToSpace	PROTO ((char FAR *String))

NLM_EXTERN Nlm_CharPtr LIBCALL SkipChar	PROTO ((char FAR *String, char Char))

NLM_EXTERN Nlm_CharPtr LIBCALL SkipToString	PROTO ((char FAR String, char FAR Find))

NLM_EXTERN Nlm_CharPtr LIBCALL SkipSet	PROTO ((char FAR String, char FAR CharSet))

NLM_EXTERN Nlm_Boolean LIBCALL StringSub	PROTO ((char FAR *String, char Find, char Replace))

NLM_EXTERN Nlm_Boolean LIBCALL StringSubSet	PROTO ((char FAR String, char FAR FindSet, char Replace))

NLM_EXTERN Nlm_Boolean LIBCALL StringSubString	PROTO ((char FAR String, char FAR Find, char FAR *Replace, Nlm_Int4 MaxLength))

NLM_EXTERN Nlm_Int4 LIBCALL CountSet	PROTO ((char FAR String, char FAR Set))

NLM_EXTERN Nlm_Int4 LIBCALL StringDiff	PROTO ((char FAR This, char FAR That))

NLM_EXTERN Nlm_Int4 LIBCALL StringDiffNum	PROTO ((char FAR This, char FAR That, Nlm_Int4 NumChars))

NLM_EXTERN void LIBCALL TruncateString	PROTO ((char FAR *String, Nlm_Int4 Length))

NLM_EXTERN Nlm_Int4 LIBCALL BreakString	PROTO ((char FAR *String, Nlm_CharPtr PNTR Words))

NLM_EXTERN void LIBCALL DeleteChar	PROTO ((char FAR *String, char Delete))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringPrintable	PROTO ((const Nlm_Char PNTR str, Nlm_Boolean rn_eol))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_text2stream	PROTO ((const Nlm_Char FAR PNTR str))

NLM_EXTERN size_t Nlm_stream2text	PROTO ((const Nlm_Char FAR PNTR str, size_t max_col, int PNTR dash))

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_rule_line	PROTO ((const Nlm_Char FAR PNTR str, size_t len, Nlm_enumRuleLine method))

NLM_EXTERN Nlm_Boolean	Nlm_SetupSubString (const char FAR *sub, Nlm_Boolean caseCounts, Nlm_SubStringData PNTR data)

NLM_EXTERN Nlm_CharPtr	Nlm_SearchSubString (const char FAR *str, Nlm_SubStringData PNTR data)

Nlm_Int8 LIBCALL	StringToInt8 (const char str, const char *endptr)

Nlm_Uint8 LIBCALL	StringToUint8 (const char str, const char *endptr)

char *LIBCALL	Int8ToString (Nlm_Int8 value, char *str, size_t str_size)

char *LIBCALL	Uint8ToString (Nlm_Uint8 value, char *str, size_t str_size)

Nlmzip_rc_t	Nlmzip_Compress (const void , Int4, void , Int4, Int4Ptr)

Nlmzip_rc_t	Nlmzip_Uncompress (const void , Int4, void , Int4, Int4Ptr)

Int4	Nlmzip_UncompressedSize (VoidPtr, Int4)

const char *	Nlmzip_ErrMsg (Int4)

Boolean	Nlmzip_CrcMode (Boolean)

fci_t LIBCALL	fci_open (Pointer data, Int4(proc_buf)(Pointer ptr, CharPtr buf, Int4 count), Int4(pclose)(Pointer ptr, int commit))

fci_t LIBCALL	cacher_open (fci_t stream, int max_cache_size, int read)

fci_t LIBCALL	compressor_open (fci_t stream, int max_buffer_size, int read)

bool	CT_CompressBuffer (const void src_buf, size_t src_len, void dst_buf, size_t dst_size, size_t *dst_len, CCompressStream::EMethod method=CCompressStream::eZip, CCompression::ELevel level=CCompression::eLevel_Default)
	Compress data in the buffer. More...

bool	CT_DecompressBuffer (const void src_buf, size_t src_len, void dst_buf, size_t dst_size, size_t *dst_len)
	Decompress data in the buffer. More...

Variables
Nlm_Int8	_nlm_mem_map::file_size

Nlm_CharPtr	_nlm_mem_map::mmp_begin

int	substringdata::d [256]

size_t	substringdata::subLen

Nlm_Boolean	substringdata::caseCounts

Nlm_Boolean	substringdata::initialized

const char FAR *	substringdata::sub

BEGIN_CTRANSITION_SCOPE	USING_NCBI_SCOPE

Pointer	fci_t::data

Int4(*	fci_t::proc_buf )(Pointer ptr, CharPtr buf, Int4 count)

Int4(*	fci_t::close )(Pointer ptr, int commit)

Detailed Description

Macro Definition Documentation

◆ ABS

#define ABS ( a ) ((a)>=0?(a):-(a))

Definition at line 249 of file ncbistd.hpp.

◆ BEGIN_CTRANSITION_SCOPE

#define BEGIN_CTRANSITION_SCOPE BEGIN_SCOPE(CTRANSITION_NS)

Definition at line 49 of file ncbilcl.hpp.

◆ BIG_ENDIAN

#define BIG_ENDIAN 4321

Definition at line 70 of file ncbistd.hpp.

◆ BigScalar

#define BigScalar long

Definition at line 209 of file ncbistd.hpp.

◆ Boolean

#define Boolean Nlm_Boolean

Definition at line 136 of file ncbistd.hpp.

◆ BoolPtr

#define BoolPtr Nlm_BoolPtr

Definition at line 137 of file ncbistd.hpp.

◆ Byte

#define Byte Nlm_Byte

Definition at line 142 of file ncbistd.hpp.

◆ BYTE_MAX

#define BYTE_MAX UCHAR_MAX

Definition at line 144 of file ncbistd.hpp.

◆ BYTE_ORDER

#define BYTE_ORDER OTHER_ENDIAN

Definition at line 81 of file ncbistd.hpp.

◆ BytePtr

#define BytePtr Nlm_BytePtr

Definition at line 143 of file ncbistd.hpp.

◆ Calloc

#define Calloc Nlm_Calloc

Definition at line 120 of file ncbimem.hpp.

◆ CDECL

#define CDECL

Definition at line 281 of file ncbistd.hpp.

◆ Char

#define Char Nlm_Char

Definition at line 124 of file ncbistd.hpp.

◆ CharPtr

#define CharPtr Nlm_CharPtr

Definition at line 125 of file ncbistd.hpp.

◆ COMP_GNU

#define COMP_GNU

Definition at line 93 of file ncbilcl.hpp.

◆ CompressSpaces

#define CompressSpaces Nlm_CompressSpaces

Definition at line 343 of file ncbistr.hpp.

◆ DIM

#define DIM ( A ) (sizeof(A)/sizeof((A)[0]))

Definition at line 261 of file ncbistd.hpp.

◆ dll_Free

#define dll_Free ( x ) Nlm_Free((void*) (x))

Definition at line 180 of file ncbimem.hpp.

◆ dll_Malloc

#define dll_Malloc ( x ) (void*) Nlm_Malloc(x)

Definition at line 179 of file ncbimem.hpp.

◆ E_NoMemory

#define E_NoMemory 1

Definition at line 48 of file ncbierr.hpp.

◆ E_Programmer

#define E_Programmer 999

Definition at line 49 of file ncbierr.hpp.

◆ END_CTRANSITION_SCOPE

#define END_CTRANSITION_SCOPE END_SCOPE(CTRANSITION_NS)

Definition at line 50 of file ncbilcl.hpp.

◆ enumRuleLine

#define enumRuleLine Nlm_enumRuleLine

Definition at line 246 of file ncbistr.hpp.

◆ ErrPostEx

#define ErrPostEx	(	sev,
		err_code,
		...
	)

Value:

    ( NCBI_NS_NCBI::CNcbiDiag(DIAG_COMPILE_INFO).GetRef()  \
      << NCBI_NS_NCBI::ErrCode(err_code)                   \
      << ctransition_ErrSeverity(sev)                      \
      << ctransition_ErrMessage(__VA_ARGS__)               \
      << NCBI_NS_NCBI::Endm )

Definition at line 78 of file ncbierr.hpp.

◆ ErrPostStr

#define ErrPostStr ErrPostEx

Definition at line 68 of file ncbierr.hpp.

◆ ErrSetLog

#define ErrSetLog SetLogFile

Definition at line 69 of file ncbierr.hpp.

◆ EXPORT

#define EXPORT

Definition at line 287 of file ncbistd.hpp.

◆ FALSE

#define FALSE ((Nlm_Boolean)0)

Definition at line 237 of file ncbistd.hpp.

◆ FAR

#define FAR

Definition at line 278 of file ncbistd.hpp.

◆ FCI_CLOSE

#define FCI_CLOSE	(	_fci,
		_commit
	)	{ _fci->close(_fci->data,_commit); MemFree(_fci); }

Definition at line 147 of file nlmzip.hpp.

◆ FCI_READ

#define FCI_READ	(	_fci,
		_buf,
		_len
	)	_fci->proc_buf(_fci->data,_buf,_len)

Definition at line 146 of file nlmzip.hpp.

◆ FloatHi

#define FloatHi Nlm_FloatHi

Definition at line 204 of file ncbistd.hpp.

◆ FloatHiPtr

#define FloatHiPtr Nlm_FloatHiPtr

Definition at line 205 of file ncbistd.hpp.

◆ FloatLo

#define FloatLo Nlm_FloatLo

Definition at line 198 of file ncbistd.hpp.

◆ FloatLoPtr

#define FloatLoPtr Nlm_FloatLoPtr

Definition at line 199 of file ncbistd.hpp.

◆ FnPtr

#define FnPtr Nlm_FnPtr

Definition at line 106 of file ncbistd.hpp.

◆ Free

#define Free Nlm_Free

Definition at line 122 of file ncbimem.hpp.

◆ HandFree

#define HandFree Nlm_HandFree

Definition at line 156 of file ncbimem.hpp.

◆ HandGet

#define HandGet Nlm_HandGet

Definition at line 154 of file ncbimem.hpp.

◆ Handle

#define Handle Nlm_Handle

Definition at line 119 of file ncbistd.hpp.

◆ HandLock

#define HandLock Nlm_HandLock

Definition at line 157 of file ncbimem.hpp.

◆ HandMore

#define HandMore Nlm_HandMore

Definition at line 155 of file ncbimem.hpp.

◆ HandNew

#define HandNew Nlm_HandNew

Definition at line 153 of file ncbimem.hpp.

◆ HandUnlock

#define HandUnlock Nlm_HandUnlock

Definition at line 158 of file ncbimem.hpp.

◆ HNDL

#define HNDL *

Definition at line 101 of file ncbistd.hpp.

◆ INLINE [1/2]

#define INLINE inline

Definition at line 186 of file ncbilcl.hpp.

◆ INLINE [2/2]

#define INLINE

Definition at line 90 of file ncbistd.hpp.

◆ Int1

#define Int1 Nlm_Int1

Definition at line 149 of file ncbistd.hpp.

◆ INT1_MAX

#define INT1_MAX SCHAR_MAX

Definition at line 152 of file ncbistd.hpp.

◆ INT1_MIN

#define INT1_MIN SCHAR_MIN

Definition at line 151 of file ncbistd.hpp.

◆ Int1Ptr

#define Int1Ptr Nlm_Int1Ptr

Definition at line 150 of file ncbistd.hpp.

◆ Int2

#define Int2 Nlm_Int2

Definition at line 164 of file ncbistd.hpp.

◆ INT2_MAX

#define INT2_MAX SHRT_MAX

Definition at line 167 of file ncbistd.hpp.

◆ INT2_MIN

#define INT2_MIN SHRT_MIN

Definition at line 166 of file ncbistd.hpp.

◆ Int2Ptr

#define Int2Ptr Nlm_Int2Ptr

Definition at line 165 of file ncbistd.hpp.

◆ Int4

#define Int4 Nlm_Int4

Definition at line 179 of file ncbistd.hpp.

◆ INT4_MAX

#define INT4_MAX 2147483647

Definition at line 182 of file ncbistd.hpp.

◆ INT4_MIN

#define INT4_MIN (-2147483647-1)

Definition at line 181 of file ncbistd.hpp.

◆ Int4Ptr

#define Int4Ptr Nlm_Int4Ptr

Definition at line 180 of file ncbistd.hpp.

◆ Int8

#define Int8 Nlm_Int8

Definition at line 245 of file ncbiopt.hpp.

◆ INT8_MAX

#define INT8_MAX INT4_MAX

Definition at line 237 of file ncbiopt.hpp.

◆ INT8_MIN

#define INT8_MIN INT4_MIN

Definition at line 236 of file ncbiopt.hpp.

◆ Int8Ptr

#define Int8Ptr Nlm_Int8Ptr

Definition at line 247 of file ncbiopt.hpp.

◆ IS_ALPHA

#define IS_ALPHA ( c ) (IS_UPPER(c) || IS_LOWER(c))

Definition at line 395 of file ncbistr.hpp.

◆ IS_ALPHANUM

#define IS_ALPHANUM ( c ) (IS_ALPHA(c) || IS_DIGIT(c))

Definition at line 399 of file ncbistr.hpp.

◆ IS_DIGIT

#define IS_DIGIT ( c ) ('0'<=(c) && (c)<='9')

Definition at line 392 of file ncbistr.hpp.

◆ IS_LOWER

#define IS_LOWER ( c ) ('a'<=(c) && (c)<='z')

Definition at line 394 of file ncbistr.hpp.

◆ IS_PRINT

#define IS_PRINT ( c ) (' '<=(c) && (c)<='~')

Definition at line 400 of file ncbistr.hpp.

◆ IS_UPPER

#define IS_UPPER ( c ) ('A'<=(c) && (c)<='Z')

Definition at line 393 of file ncbistr.hpp.

◆ IS_WHITESP

#define IS_WHITESP ( c ) (((c) == ' ') || ((c) == '\n') || ((c) == '\r') || ((c) == '\t'))

Definition at line 398 of file ncbistr.hpp.

◆ LabelCopy

#define LabelCopy Nlm_LabelCopy

Definition at line 345 of file ncbistr.hpp.

◆ LabelCopyExtra

#define LabelCopyExtra Nlm_LabelCopyExtra

Definition at line 346 of file ncbistr.hpp.

◆ LIBCALL

#define LIBCALL FAR PASCAL

Definition at line 297 of file ncbistd.hpp.

◆ LIBCALLBACK

#define LIBCALLBACK FAR PASCAL

Definition at line 302 of file ncbistd.hpp.

◆ LITTLE_ENDIAN

#define LITTLE_ENDIAN 1234

Definition at line 69 of file ncbistd.hpp.

◆ LN10

#define LN10 (2.302585092994046)

Definition at line 268 of file ncbistd.hpp.

◆ LN2

#define LN2 (0.693147180559945)

Definition at line 265 of file ncbistd.hpp.

◆ Malloc

#define Malloc Nlm_Malloc

Definition at line 119 of file ncbimem.hpp.

◆ MAX

#define MAX	(	a,
		b
	)	((a)>=(b)?(a):(b))

Definition at line 245 of file ncbistd.hpp.

◆ MemChr

#define MemChr Nlm_MemChr

Definition at line 125 of file ncbimem.hpp.

◆ MemCmp

#define MemCmp Nlm_MemCmp

Definition at line 126 of file ncbimem.hpp.

◆ MemCopy

#define MemCopy Nlm_MemCopy

Definition at line 148 of file ncbimem.hpp.

◆ MemCpy

#define MemCpy Nlm_MemCpy

Definition at line 124 of file ncbimem.hpp.

◆ MemDup

#define MemDup Nlm_MemDup

Definition at line 151 of file ncbimem.hpp.

◆ MemExtend

#define MemExtend Nlm_MemExtend

Definition at line 147 of file ncbimem.hpp.

◆ MemFill

#define MemFill Nlm_MemFill

Definition at line 150 of file ncbimem.hpp.

◆ MemFree

#define MemFree Nlm_MemFree

Definition at line 145 of file ncbimem.hpp.

◆ MemGet

#define MemGet	(	x,
		y
	)	Nlm_MemGet(x,(unsigned int)(y))

Definition at line 144 of file ncbimem.hpp.

◆ MemMore

#define MemMore Nlm_MemMore

Definition at line 146 of file ncbimem.hpp.

◆ MemMove

#define MemMove Nlm_MemMove

Definition at line 149 of file ncbimem.hpp.

◆ MemNew

#define MemNew ( x ) Nlm_MemGet(x,MGET_CLEAR|MGET_ERRPOST)

Definition at line 143 of file ncbimem.hpp.

◆ MemSearch

#define MemSearch Nlm_MemSearch

Definition at line 127 of file ncbimem.hpp.

◆ MemSet

#define MemSet Nlm_MemSet

Definition at line 123 of file ncbimem.hpp.

◆ MeshStringICmp

#define MeshStringICmp Nlm_MeshStringICmp

Definition at line 335 of file ncbistr.hpp.

◆ MG_CLEAR

#define MG_CLEAR MGET_CLEAR

Definition at line 190 of file ncbimem.hpp.

◆ MG_ERRPOST

#define MG_ERRPOST MGET_ERRPOST

Definition at line 192 of file ncbimem.hpp.

◆ MG_MAXALLOC

#define MG_MAXALLOC 0x0002

Definition at line 191 of file ncbimem.hpp.

◆ MGET_CLEAR

#define MGET_CLEAR 0x0001

Definition at line 185 of file ncbimem.hpp.

◆ MGET_ERRPOST

#define MGET_ERRPOST 0x0004

Definition at line 186 of file ncbimem.hpp.

◆ MIN

#define MIN	(	a,
		b
	)	((a)>(b)?(b):(a))

Definition at line 241 of file ncbistd.hpp.

◆ MSG_OK

#define MSG_OK SEV_ERROR

Definition at line 65 of file ncbierr.hpp.

◆ NaturalStringCmp

#define NaturalStringCmp Nlm_NaturalStringCmp

Definition at line 332 of file ncbistr.hpp.

◆ NaturalStringICmp

#define NaturalStringICmp Nlm_NaturalStringICmp

Definition at line 333 of file ncbistr.hpp.

◆ NEAR

#define NEAR

Definition at line 275 of file ncbistd.hpp.

◆ Nlm_Calloc

#define Nlm_Calloc calloc

Definition at line 103 of file ncbimem.hpp.

◆ NLM_EXTERN

#define NLM_EXTERN

Definition at line 290 of file ncbistd.hpp.

◆ Nlm_Free

#define Nlm_Free free

Definition at line 105 of file ncbimem.hpp.

◆ Nlm_HandFree

#define Nlm_HandFree ( a ) Nlm_MemFree(a)

Definition at line 137 of file ncbimem.hpp.

◆ Nlm_HandGet

#define Nlm_HandGet	(	a,
		b
	)	Nlm_MemGet(a,b)

Definition at line 135 of file ncbimem.hpp.

◆ Nlm_HandLock

#define Nlm_HandLock ( a ) (a)

Definition at line 138 of file ncbimem.hpp.

◆ Nlm_HandMore

#define Nlm_HandMore	(	a,
		b
	)	Nlm_MemMore(a,b)

Definition at line 136 of file ncbimem.hpp.

◆ Nlm_HandNew

#define Nlm_HandNew ( a ) Nlm_MemNew(a)

Definition at line 134 of file ncbimem.hpp.

◆ Nlm_HandUnlock

#define Nlm_HandUnlock ( a ) NULL

Definition at line 139 of file ncbimem.hpp.

◆ Nlm_Int8

#define Nlm_Int8 Nlm_Int4

Definition at line 231 of file ncbiopt.hpp.

◆ Nlm_Int8Ptr

#define Nlm_Int8Ptr Nlm_Int4Ptr

Definition at line 232 of file ncbiopt.hpp.

◆ Nlm_Malloc

#define Nlm_Malloc malloc

Definition at line 102 of file ncbimem.hpp.

◆ Nlm_MemChr

#define Nlm_MemChr memchr

Definition at line 108 of file ncbimem.hpp.

◆ Nlm_MemCmp

#define Nlm_MemCmp memcmp

Definition at line 109 of file ncbimem.hpp.

◆ Nlm_MemCpy

#define Nlm_MemCpy memcpy

Definition at line 107 of file ncbimem.hpp.

◆ Nlm_MemSet

#define Nlm_MemSet memset

Definition at line 106 of file ncbimem.hpp.

◆ Nlm_Message

#define Nlm_Message	(	key,
		...
	)	ErrPostEx((ErrSev)key, 0, __VA_ARGS__)

Definition at line 87 of file ncbierr.hpp.

◆ Nlm_Realloc

#define Nlm_Realloc realloc

Definition at line 104 of file ncbimem.hpp.

◆ Nlm_StrCat

#define Nlm_StrCat strcat

Definition at line 259 of file ncbistr.hpp.

◆ Nlm_StrChr

#define Nlm_StrChr strchr

Definition at line 263 of file ncbistr.hpp.

◆ Nlm_StrCmp

#define Nlm_StrCmp strcmp

Definition at line 261 of file ncbistr.hpp.

◆ Nlm_StrCpy

#define Nlm_StrCpy strcpy

Definition at line 257 of file ncbistr.hpp.

◆ Nlm_StrCSpn

#define Nlm_StrCSpn strcspn

Definition at line 265 of file ncbistr.hpp.

◆ Nlm_StrLen

#define Nlm_StrLen strlen

Definition at line 256 of file ncbistr.hpp.

◆ Nlm_StrNCat

#define Nlm_StrNCat strncat

Definition at line 260 of file ncbistr.hpp.

◆ Nlm_StrNCmp

#define Nlm_StrNCmp strncmp

Definition at line 262 of file ncbistr.hpp.

◆ Nlm_StrNCpy

#define Nlm_StrNCpy strncpy

Definition at line 258 of file ncbistr.hpp.

◆ Nlm_StrNSet

#define Nlm_StrNSet strnset

Definition at line 266 of file ncbistr.hpp.

◆ Nlm_StrPBrk

#define Nlm_StrPBrk strpbrk

Definition at line 267 of file ncbistr.hpp.

◆ Nlm_StrRChr

#define Nlm_StrRChr strrchr

Definition at line 264 of file ncbistr.hpp.

◆ Nlm_StrSet

#define Nlm_StrSet strset

Definition at line 268 of file ncbistr.hpp.

◆ Nlm_StrSpn

#define Nlm_StrSpn strspn

Definition at line 269 of file ncbistr.hpp.

◆ Nlm_StrStr

#define Nlm_StrStr strstr

Definition at line 270 of file ncbistr.hpp.

◆ Nlm_StrTok

#define Nlm_StrTok strtok

Definition at line 271 of file ncbistr.hpp.

◆ Nlm_Uint8

#define Nlm_Uint8 Nlm_Uint4

Definition at line 233 of file ncbiopt.hpp.

◆ Nlm_Uint8Ptr

#define Nlm_Uint8Ptr Nlm_Uint4Ptr

Definition at line 234 of file ncbiopt.hpp.

◆ NULL

#define NULL ((void *)0)

Examples: /home/coremake/doxygen/cxx/include/corelib/ncbistr.hpp.

Definition at line 225 of file ncbistd.hpp.

◆ NULLB

#define NULLB '\0'

Definition at line 229 of file ncbistd.hpp.

◆ OS_MSWIN

#define OS_MSWIN

Definition at line 63 of file ncbilcl.hpp.

◆ OS_UNIX

#define OS_UNIX

Definition at line 59 of file ncbilcl.hpp.

◆ OTHER_ENDIAN

#define OTHER_ENDIAN 0

Definition at line 71 of file ncbistd.hpp.

◆ PASCAL

#define PASCAL

Definition at line 284 of file ncbistd.hpp.

◆ PATH_MAX

#define PATH_MAX FILENAME_MAX

Definition at line 221 of file ncbistd.hpp.

◆ PNTR

#define PNTR *

Definition at line 98 of file ncbistd.hpp.

◆ Pointer

#define Pointer Nlm_VoidPtr

Definition at line 114 of file ncbistd.hpp.

◆ PROTO

#define PROTO ( x ) x

Definition at line 183 of file ncbilcl.hpp.

◆ Realloc

#define Realloc Nlm_Realloc

Definition at line 121 of file ncbimem.hpp.

◆ ROUNDUP

#define ROUNDUP	(	A,
		B
	)	(((A)%(B)) != 0 ? (A)+(B)-((A)%(B)) : (A))

Definition at line 257 of file ncbistd.hpp.

◆ rule_line

#define rule_line Nlm_rule_line

Definition at line 252 of file ncbistr.hpp.

◆ SearchSubString

#define SearchSubString Nlm_SearchSubString

Definition at line 385 of file ncbistr.hpp.

◆ SetupSubString

#define SetupSubString Nlm_SetupSubString

Definition at line 384 of file ncbistr.hpp.

◆ SIGN

#define SIGN ( a ) ((a)>0?1:((a)<0?-1:0))

Definition at line 253 of file ncbistd.hpp.

◆ SIZE_MAX

#define SIZE_MAX MAXALLOC

Definition at line 217 of file ncbistd.hpp.

◆ StrCat

#define StrCat Nlm_StrCat

Definition at line 284 of file ncbistr.hpp.

◆ StrChr

#define StrChr Nlm_StrChr

Definition at line 292 of file ncbistr.hpp.

◆ StrCmp

#define StrCmp Nlm_StrCmp

Definition at line 286 of file ncbistr.hpp.

◆ StrCnt

#define StrCnt Nlm_StrCnt

Definition at line 303 of file ncbistr.hpp.

◆ StrCpy

#define StrCpy Nlm_StrCpy

Definition at line 282 of file ncbistr.hpp.

◆ StrCSpn

#define StrCSpn Nlm_StrCSpn

Definition at line 294 of file ncbistr.hpp.

◆ stream2text

#define stream2text Nlm_stream2text

Definition at line 231 of file ncbistr.hpp.

◆ StrICmp

#define StrICmp Nlm_StrICmp

Definition at line 288 of file ncbistr.hpp.

◆ StringCat

#define StringCat Nlm_StringCat

Definition at line 311 of file ncbistr.hpp.

◆ StringChr

#define StringChr Nlm_StringChr

Definition at line 317 of file ncbistr.hpp.

◆ StringCmp

#define StringCmp Nlm_StringCmp

Definition at line 313 of file ncbistr.hpp.

◆ StringCnt

#define StringCnt Nlm_StringCnt

Definition at line 328 of file ncbistr.hpp.

◆ StringCpy

#define StringCpy Nlm_StringCpy

Definition at line 308 of file ncbistr.hpp.

◆ StringCSpn

#define StringCSpn Nlm_StringCSpn

Definition at line 321 of file ncbistr.hpp.

◆ StringDoesHaveText

#define StringDoesHaveText Nlm_StringDoesHaveText

Definition at line 341 of file ncbistr.hpp.

◆ StringHasNoText

#define StringHasNoText Nlm_StringHasNoText

Definition at line 340 of file ncbistr.hpp.

◆ StringICmp

#define StringICmp Nlm_StringICmp

Definition at line 315 of file ncbistr.hpp.

◆ StringIsAllDigits

#define StringIsAllDigits Nlm_StringIsAllDigits

Definition at line 357 of file ncbistr.hpp.

◆ StringIsAllLowerCase

#define StringIsAllLowerCase Nlm_StringIsAllLowerCase

Definition at line 359 of file ncbistr.hpp.

◆ StringIsAllPunctuation

#define StringIsAllPunctuation Nlm_StringIsAllPunctuation

Definition at line 360 of file ncbistr.hpp.

◆ StringIsAllUpperCase

#define StringIsAllUpperCase Nlm_StringIsAllUpperCase

Definition at line 358 of file ncbistr.hpp.

◆ StringISearch

#define StringISearch Nlm_StringISearch

Definition at line 338 of file ncbistr.hpp.

◆ StringLen

#define StringLen Nlm_StringLen

Definition at line 307 of file ncbistr.hpp.

◆ StringLower

#define StringLower Nlm_StringLower

Definition at line 330 of file ncbistr.hpp.

◆ StringMove

#define StringMove Nlm_StringMove

Definition at line 325 of file ncbistr.hpp.

◆ StringNCat

#define StringNCat Nlm_StringNCat

Definition at line 312 of file ncbistr.hpp.

◆ StringNCmp

#define StringNCmp Nlm_StringNCmp

Definition at line 314 of file ncbistr.hpp.

◆ StringNCpy

#define StringNCpy Nlm_StringNCpy

Definition at line 309 of file ncbistr.hpp.

◆ StringNCpy_0

#define StringNCpy_0 Nlm_StringNCpy_0

Definition at line 310 of file ncbistr.hpp.

◆ StringNICmp

#define StringNICmp Nlm_StringNICmp

Definition at line 316 of file ncbistr.hpp.

◆ StringPBrk

#define StringPBrk Nlm_StringPBrk

Definition at line 319 of file ncbistr.hpp.

◆ StringPrintable

#define StringPrintable Nlm_StringPrintable

Definition at line 213 of file ncbistr.hpp.

◆ StringRChr

#define StringRChr Nlm_StringRChr

Definition at line 318 of file ncbistr.hpp.

◆ StringSave

#define StringSave Nlm_StringSave

Definition at line 326 of file ncbistr.hpp.

◆ StringSaveNoNull

#define StringSaveNoNull Nlm_StringSaveNoNull

Definition at line 327 of file ncbistr.hpp.

◆ StringSearch

#define StringSearch Nlm_StringSearch

Definition at line 337 of file ncbistr.hpp.

◆ StringSpn

#define StringSpn Nlm_StringSpn

Definition at line 320 of file ncbistr.hpp.

◆ StringStr

#define StringStr Nlm_StringStr

Definition at line 322 of file ncbistr.hpp.

◆ StringTok

#define StringTok Nlm_StringTok

Definition at line 323 of file ncbistr.hpp.

◆ StringTokMT

#define StringTokMT Nlm_StringTokMT

Definition at line 324 of file ncbistr.hpp.

◆ StringUpper

#define StringUpper Nlm_StringUpper

Definition at line 329 of file ncbistr.hpp.

◆ StrIPCmp

#define StrIPCmp Nlm_StrIPCmp

Definition at line 290 of file ncbistr.hpp.

◆ StrLen

#define StrLen Nlm_StrLen

Definition at line 281 of file ncbistr.hpp.

◆ StrLower

#define StrLower Nlm_StrLower

Definition at line 305 of file ncbistr.hpp.

◆ StrMove

#define StrMove Nlm_StrMove

Definition at line 301 of file ncbistr.hpp.

◆ StrNCat

#define StrNCat Nlm_StrNCat

Definition at line 285 of file ncbistr.hpp.

◆ StrNCmp

#define StrNCmp Nlm_StrNCmp

Definition at line 287 of file ncbistr.hpp.

◆ StrNCpy

#define StrNCpy Nlm_StrNCpy

Definition at line 283 of file ncbistr.hpp.

◆ StrNICmp

#define StrNICmp Nlm_StrNICmp

Definition at line 289 of file ncbistr.hpp.

◆ StrNIPCmp

#define StrNIPCmp Nlm_StrNIPCmp

Definition at line 291 of file ncbistr.hpp.

◆ StrNSet

#define StrNSet Nlm_StrNSet

Definition at line 295 of file ncbistr.hpp.

◆ StrPBrk

#define StrPBrk Nlm_StrPBrk

Definition at line 296 of file ncbistr.hpp.

◆ StrRChr

#define StrRChr Nlm_StrRChr

Definition at line 293 of file ncbistr.hpp.

◆ StrSave

#define StrSave Nlm_StrSave

Definition at line 302 of file ncbistr.hpp.

◆ StrSet

#define StrSet Nlm_StrSet

Definition at line 297 of file ncbistr.hpp.

◆ StrSpn

#define StrSpn Nlm_StrSpn

Definition at line 298 of file ncbistr.hpp.

◆ StrStr

#define StrStr Nlm_StrStr

Definition at line 299 of file ncbistr.hpp.

◆ StrTok

#define StrTok Nlm_StrTok

Definition at line 300 of file ncbistr.hpp.

◆ StrUpper

#define StrUpper Nlm_StrUpper

Definition at line 304 of file ncbistr.hpp.

◆ SubStringData

#define SubStringData Nlm_SubStringData

Definition at line 382 of file ncbistr.hpp.

◆ SubStringDataPtr

#define SubStringDataPtr Nlm_SubStringDataPtr

Definition at line 383 of file ncbistr.hpp.

◆ text2stream

#define text2stream Nlm_text2stream

Definition at line 220 of file ncbistr.hpp.

◆ TIME_MAX

#define TIME_MAX ULONG_MAX

Definition at line 193 of file ncbistd.hpp.

◆ TO_LOWER

#define TO_LOWER ( c ) ((Nlm_Char)(IS_UPPER(c) ? (c)+' ' : (c)))

Definition at line 396 of file ncbistr.hpp.

◆ TO_UPPER

#define TO_UPPER ( c ) ((Nlm_Char)(IS_LOWER(c) ? (c)-' ' : (c)))

Definition at line 397 of file ncbistr.hpp.

◆ TrimSpacesAroundString

#define TrimSpacesAroundString Nlm_TrimSpacesAroundString

Definition at line 342 of file ncbistr.hpp.

◆ TRUE

#define TRUE ((Nlm_Boolean)1)

Definition at line 233 of file ncbistd.hpp.

◆ Uchar

#define Uchar Nlm_Uchar

Definition at line 130 of file ncbistd.hpp.

◆ UcharPtr

#define UcharPtr Nlm_UcharPtr

Definition at line 131 of file ncbistd.hpp.

◆ Uint1

#define Uint1 Nlm_Uint1

Definition at line 157 of file ncbistd.hpp.

◆ UINT1_MAX

#define UINT1_MAX UCHAR_MAX

Definition at line 159 of file ncbistd.hpp.

◆ Uint1Ptr

#define Uint1Ptr Nlm_Uint1Ptr

Definition at line 158 of file ncbistd.hpp.

◆ Uint2

#define Uint2 Nlm_Uint2

Definition at line 172 of file ncbistd.hpp.

◆ UINT2_MAX

#define UINT2_MAX USHRT_MAX

Definition at line 174 of file ncbistd.hpp.

◆ Uint2Ptr

#define Uint2Ptr Nlm_Uint2Ptr

Definition at line 173 of file ncbistd.hpp.

◆ Uint4

#define Uint4 Nlm_Uint4

Definition at line 187 of file ncbistd.hpp.

◆ UINT4_MAX

#define UINT4_MAX 4294967295U

Definition at line 189 of file ncbistd.hpp.

◆ Uint4Ptr

#define Uint4Ptr Nlm_Uint4Ptr

Definition at line 188 of file ncbistd.hpp.

◆ Uint8

#define Uint8 Nlm_Uint8

Definition at line 246 of file ncbiopt.hpp.

◆ UINT8_MAX

#define UINT8_MAX UINT4_MAX

Definition at line 238 of file ncbiopt.hpp.

◆ Uint8Ptr

#define Uint8Ptr Nlm_Uint8Ptr

Definition at line 248 of file ncbiopt.hpp.

◆ USING_CTRANSITION_SCOPE

#define USING_CTRANSITION_SCOPE USING_SCOPE(CTRANSITION_NS)

Definition at line 51 of file ncbilcl.hpp.

◆ VoidPtr

#define VoidPtr Nlm_VoidPtr

Definition at line 111 of file ncbistd.hpp.

◆ VPROTO

#define VPROTO ( x ) x

Definition at line 184 of file ncbilcl.hpp.

Typedef Documentation

◆ Nlm_Boolean

typedef unsigned char Nlm_Boolean

Definition at line 135 of file ncbistd.hpp.

◆ Nlm_BoolPtr

typedef unsigned char * Nlm_BoolPtr

Definition at line 135 of file ncbistd.hpp.

◆ Nlm_Byte

typedef unsigned char Nlm_Byte

Definition at line 141 of file ncbistd.hpp.

◆ Nlm_BytePtr

typedef unsigned char * Nlm_BytePtr

Definition at line 141 of file ncbistd.hpp.

◆ Nlm_Char

typedef char Nlm_Char

Definition at line 123 of file ncbistd.hpp.

◆ Nlm_CharPtr

typedef char * Nlm_CharPtr

Definition at line 123 of file ncbistd.hpp.

◆ Nlm_FloatHi

typedef double Nlm_FloatHi

Definition at line 203 of file ncbistd.hpp.

◆ Nlm_FloatHiPtr

typedef double * Nlm_FloatHiPtr

Definition at line 203 of file ncbistd.hpp.

◆ Nlm_FloatLo

typedef float Nlm_FloatLo

Definition at line 197 of file ncbistd.hpp.

◆ Nlm_FloatLoPtr

typedef float * Nlm_FloatLoPtr

Definition at line 197 of file ncbistd.hpp.

◆ Nlm_FnPtr

typedef int(* Nlm_FnPtr) (void)

Definition at line 105 of file ncbistd.hpp.

◆ Nlm_Handle

typedef void* Nlm_Handle

Definition at line 118 of file ncbistd.hpp.

◆ Nlm_Int1

typedef signed char Nlm_Int1

Definition at line 148 of file ncbistd.hpp.

◆ Nlm_Int1Ptr

typedef signed char * Nlm_Int1Ptr

Definition at line 148 of file ncbistd.hpp.

◆ Nlm_Int2

typedef short Nlm_Int2

Definition at line 163 of file ncbistd.hpp.

◆ Nlm_Int2Ptr

typedef short * Nlm_Int2Ptr

Definition at line 163 of file ncbistd.hpp.

◆ Nlm_Int4

typedef signed int Nlm_Int4

Definition at line 178 of file ncbistd.hpp.

◆ Nlm_Int4Ptr

typedef signed int * Nlm_Int4Ptr

Definition at line 178 of file ncbistd.hpp.

◆ Nlm_MemMap

typedef struct _nlm_mem_map Nlm_MemMap

◆ Nlm_MemMapPtr

typedef struct _nlm_mem_map Nlm_MemMapPtr

◆ Nlm_SubStringData

typedef struct substringdata Nlm_SubStringData

◆ Nlm_SubStringDataPtr

typedef struct substringdata Nlm_SubStringDataPtr

◆ Nlm_Uchar

typedef unsigned char Nlm_Uchar

Definition at line 129 of file ncbistd.hpp.

◆ Nlm_UcharPtr

typedef unsigned char * Nlm_UcharPtr

Definition at line 129 of file ncbistd.hpp.

◆ Nlm_Uint1

typedef unsigned char Nlm_Uint1

Definition at line 156 of file ncbistd.hpp.

◆ Nlm_Uint1Ptr

typedef unsigned char * Nlm_Uint1Ptr

Definition at line 156 of file ncbistd.hpp.

◆ Nlm_Uint2

typedef unsigned short Nlm_Uint2

Definition at line 171 of file ncbistd.hpp.

◆ Nlm_Uint2Ptr

typedef unsigned short * Nlm_Uint2Ptr

Definition at line 171 of file ncbistd.hpp.

◆ Nlm_Uint4

typedef unsigned int Nlm_Uint4

Definition at line 186 of file ncbistd.hpp.

◆ Nlm_Uint4Ptr

typedef unsigned int * Nlm_Uint4Ptr

Definition at line 186 of file ncbistd.hpp.

◆ Nlm_VoidPtr

typedef void* Nlm_VoidPtr

Definition at line 110 of file ncbistd.hpp.

Enumeration Type Documentation

◆ EMemMapAdvise

enum EMemMapAdvise

Enumerator
eMMA_Normal
eMMA_Random
eMMA_Sequential
eMMA_WillNeed
eMMA_DontNeed

Definition at line 233 of file ncbimem.hpp.

◆ ErrSev

enum ErrSev

Enumerator
SEV_NONE
SEV_INFO
SEV_WARNING
SEV_ERROR
SEV_REJECT
SEV_FATAL
SEV_MAX
SEV_NONE
SEV_INFO
SEV_WARNING
SEV_ERROR
SEV_REJECT
SEV_FATAL
SEV_MAX

Definition at line 63 of file ncbierr.hpp.

◆ Nlm_enumRuleLine

enum Nlm_enumRuleLine

Enumerator
RL_Left
RL_Right
RL_Center
RL_Spread

Definition at line 239 of file ncbistr.hpp.

◆ Nlmzip_rc_t

enum Nlmzip_rc_t

Enumerator
NLMZIP_OKAY
NLMZIP_INVALIDPARAM
NLMZIP_BADCRC
NLMZIP_OUTSMALL
NLMZIP_NOMEMORY

Definition at line 128 of file nlmzip.hpp.

Function Documentation

◆ BytesToUint8()

NLM_EXTERN Nlm_Uint8 LIBCALL BytesToUint8 ( Nlm_Uint1Ptr bytes )

Definition at line 864 of file ct_ncbistr.cpp.

References i, Nlm_Uint8, and rapidjson::value.

◆ cacher_open()

fci_t LIBCALL cacher_open	(	fci_t	stream,
		int	max_cache_size,
		int	read
	)

Definition at line 296 of file ct_nlmzip_streamprocs.cpp.

References cacher_close(), cacher_read(), cacher_write(), data, ErrPostEx, fci_open(), Nlm_MemFree(), Nlm_MemNew(), NULL, and SEV_ERROR.

Referenced by compressor_open().

◆ compressor_open()

fci_t LIBCALL compressor_open	(	fci_t	stream,
		int	max_buffer_size,
		int	read
	)

Definition at line 551 of file ct_nlmzip_streamprocs.cpp.

References cacher_open(), compressor_close(), compressor_read(), compressor_write(), data, fci_open(), and Nlm_MemNew().

◆ CT_CompressBuffer()

bool CT_CompressBuffer	(	const void *	src_buf,
		size_t	src_len,
		void *	dst_buf,
		size_t	dst_size,
		size_t *	dst_len,
		CCompressStream::EMethod	method = `CCompressStream::eZip`,
		CCompression::ELevel	level = `CCompression::eLevel_Default`
	)

Compress data in the buffer.

Use specified method to.compress data.

Parameters

src_buf	Source buffer.
src_len	Size of data in source buffer.
dst_buf	Destination buffer.
dst_size	Size of destination buffer. In some cases, small source data or bad compressed data for example, it should be a little more then size of the source buffer.
dst_len	Size of compressed data in destination buffer.
method	Compression method, zip/deflate by default.

See also: CT_DecompressBuffer, CCompression

Returns: Return TRUE if operation was successfully or FALSE otherwise. On success, 'dst_buf' contains compressed data of 'dst_len' size.

Definition at line 560 of file ct_nlmzip_dcompr.cpp.

References CBZip2Compression::CompressBuffer(), CLZOCompression::CompressBuffer(), CZipCompression::CompressBuffer(), CCompressStream::eBZip2, CCompressStream::eConcatenatedGZipFile, CCompressStream::eGZipFile, CCompressStream::eLZO, CCompressStream::eNone, CCompressStream::eZip, CZipCompression::fGZip, CCompression::GetFlags(), kHeaderSize, kMagic, n, NCBI_THROW, and CCompression::SetFlags().

◆ CT_DecompressBuffer()

bool CT_DecompressBuffer	(	const void *	src_buf,
		size_t	src_len,
		void *	dst_buf,
		size_t	dst_size,
		size_t *	dst_len
	)

Decompress data in the buffer.

Automatically detects format of data, written by CT_CompressBuffer. If it cannot recognize format, assumes that this is an NlMZIP.

Note: The decompressor stops and returns TRUE, if it find logical end in the compressed data, even not all compressed data was processed.

Parameters

src_buf	Source buffer.
src_len	Size of data in source buffer.
dst_buf	Destination buffer. It must be large enough to hold all of the uncompressed data for the operation to complete.
dst_size	Size of destination buffer.
dst_len	Size of decompressed data in destination buffer.

See also: CT_CompressBuffer, CCompression

Returns: Return TRUE if operation was successfully or FALSE otherwise. On success, 'dst_buf' contains decompressed data of dst_len size.

Definition at line 644 of file ct_nlmzip_dcompr.cpp.

References CBZip2Compression::DecompressBuffer(), CLZOCompression::DecompressBuffer(), CZipCompression::DecompressBuffer(), CCompressStream::eBZip2, CCompressStream::eConcatenatedGZipFile, CCompressStream::eGZipFile, CCompressStream::eLZO, CCompressStream::eNone, CCompressStream::eZip, CZipCompression::fGZip, CCompression::GetFlags(), kHeaderSize, kMagic, kMax_I4, n, NCBI_THROW, NLMZIP_OKAY, Nlmzip_Uncompress(), and CCompression::SetFlags().

◆ CTOOLS_CToCxxSeverity()

EDiagSev CTOOLS_CToCxxSeverity ( int c_severity )

Definition at line 42 of file ctools.cpp.

References eDiag_Critical, eDiag_Error, eDiag_Fatal, eDiag_Info, eDiag_Trace, eDiag_Warning, SEV_ERROR, SEV_FATAL, SEV_INFO, SEV_NONE, SEV_REJECT, and SEV_WARNING.

Referenced by s_c2cxxErrorHandler().

◆ CTOOLS_CxxToCSeverity()

int CTOOLS_CxxToCSeverity ( EDiagSev cxx_severity )

Definition at line 71 of file ctools.cpp.

References eDiag_Critical, eDiag_Error, eDiag_Fatal, eDiag_Info, eDiag_Trace, eDiag_Warning, SEV_ERROR, SEV_FATAL, SEV_INFO, SEV_NONE, SEV_REJECT, and SEV_WARNING.

◆ ctransition_ErrMessage()

std::string ctransition_ErrMessage	(	const char *	format,
			...
	)

Definition at line 72 of file ct_ncbierr.cpp.

References _TROUBLE, buffer, format, kMax, n, string, and vsnprintf.

◆ ctransition_ErrSeverity()

NCBI_NS_NCBI::Severity ctransition_ErrSeverity ( ErrSev sev )

Definition at line 44 of file ct_ncbierr.cpp.

References eDiag_Critical, eDiag_Error, eDiag_Fatal, eDiag_Info, eDiag_Trace, eDiag_Warning, SEV_ERROR, SEV_FATAL, SEV_INFO, SEV_NONE, SEV_REJECT, and SEV_WARNING.

◆ fci_open()

fci_t LIBCALL fci_open	(	Pointer	data,
		Int4(*)(Pointer ptr, CharPtr buf, Int4 count)	proc_buf,
		Int4(*)(Pointer ptr, int commit)	pclose
	)

Definition at line 89 of file ct_nlmzip_streamprocs.cpp.

References fci_t::close, fci_t::data, data, Nlm_MemNew(), and fci_t::proc_buf.

Referenced by cacher_open(), and compressor_open().

◆ Int8ToString()

char* LIBCALL Int8ToString	(	Nlm_Int8	value,
		char *	str,
		size_t	str_size
	)

inline

Examples: /home/coremake/doxygen/cxx/include/corelib/ncbistr.hpp.

Definition at line 420 of file ncbistr.hpp.

References Nlm_Int8ToString(), str(), and rapidjson::value.

◆ Nlm_CallocViaMalloc()

NLM_EXTERN void* Nlm_CallocViaMalloc	(	size_t	n_elem,
		size_t	item_size
	)

Definition at line 94 of file ct_ncbimem.cpp.

References Nlm_Malloc, Nlm_MemSet, and ncbi::grid::netcache::search::fields::size.

◆ Nlm_Int8ToString()

NLM_EXTERN char* LIBCALL Nlm_Int8ToString	(	Nlm_Int8	value,
		char *	str,
		size_t	str_size
	)

Definition at line 984 of file ct_ncbistr.cpp.

References Nlm_Uint8, NULL, s_Uint8ToString(), str(), val, and rapidjson::value.

Referenced by Int8ToString().

◆ Nlm_MemCopy()

NLM_EXTERN void* LIBCALL Nlm_MemCopy	(	void *	dst,
		const void *	src,
		size_t	bytes
	)

Definition at line 330 of file ct_ncbimem.cpp.

References Nlm_MemCpy, and NULL.

◆ Nlm_MemDup()

NLM_EXTERN void* LIBCALL Nlm_MemDup	(	const void *	orig,
		size_t	size
	)

Definition at line 342 of file ct_ncbimem.cpp.

References _msgMemory, copy(), E_NoMemory, ErrPostEx, Nlm_Malloc, Nlm_MemCpy, NULL, orig, SEV_FATAL, and ncbi::grid::netcache::search::fields::size.

◆ Nlm_MemExtend()

NLM_EXTERN void* LIBCALL Nlm_MemExtend	(	void *	ptr,
		size_t	size,
		size_t	oldsize
	)

Definition at line 281 of file ct_ncbimem.cpp.

References eA_Realloc, MGET_ERRPOST, s_MemAllocator(), and ncbi::grid::netcache::search::fields::size.

◆ Nlm_MemFill()

NLM_EXTERN void* LIBCALL Nlm_MemFill	(	void *	ptr,
		int	value,
		size_t	bytes
	)

Definition at line 391 of file ct_ncbimem.cpp.

References buf, Nlm_MemSet, NULL, and rapidjson::value.

◆ Nlm_MemFree()

NLM_EXTERN void* LIBCALL Nlm_MemFree ( void * ptr )

Definition at line 298 of file ct_ncbimem.cpp.

References free(), and NULL.

Referenced by cacher_close(), cacher_open(), cacher_read(), compressor_close(), compressor_read(), compressor_write(), Nlm_MemMapFini(), Nlm_MemMapInit(), Nlm_rule_line(), s_IdLabel(), s_MemAllocator(), and StringSubString().

◆ Nlm_MemGet()

NLM_EXTERN void* LIBCALL Nlm_MemGet	(	size_t	size,
		unsigned int	flags
	)

Definition at line 266 of file ct_ncbimem.cpp.

References eA_Malloc, flags, s_MemAllocator(), and ncbi::grid::netcache::search::fields::size.

Referenced by Nlm_StringPrintable(), Nlm_StrSave(), StrDupPtr(), and StringSubString().

◆ Nlm_MemMapAdvise()

Nlm_Boolean Nlm_MemMapAdvise	(	void *	addr,
		size_t	len,
		EMemMapAdvise	advise
	)

Definition at line 829 of file ct_ncbimem.cpp.

References eMMA_DontNeed, eMMA_Random, eMMA_Sequential, eMMA_WillNeed, FALSE, len, and TRUE.

Referenced by Nlm_MemMapAdvisePtr().

◆ Nlm_MemMapAdvisePtr()

Nlm_Boolean Nlm_MemMapAdvisePtr	(	Nlm_MemMapPtr	ptr,
		EMemMapAdvise	advise
	)

Definition at line 856 of file ct_ncbimem.cpp.

References FALSE, _nlm_mem_map::file_size, _nlm_mem_map::mmp_begin, Nlm_MemMapAdvise(), and TRUE.

◆ Nlm_MemMapAvailable()

NLM_EXTERN Nlm_Boolean Nlm_MemMapAvailable ( void )

Definition at line 732 of file ct_ncbimem.cpp.

References FALSE, and TRUE.

Referenced by Nlm_MemMapInit().

◆ Nlm_MemMapFini()

NLM_EXTERN void Nlm_MemMapFini ( Nlm_MemMapPtr mem_mapp )

Definition at line 812 of file ct_ncbimem.cpp.

References _nlm_mem_map::file_size, _nlm_mem_map::mmp_begin, and Nlm_MemFree().

◆ Nlm_MemMapInit()

NLM_EXTERN Nlm_MemMapPtr Nlm_MemMapInit ( const Nlm_Char PNTR name )

Definition at line 742 of file ct_ncbimem.cpp.

References _T_XCSTRING, close(), FALSE, _nlm_mem_map::file_size, HANDLE, INVALID_HANDLE_VALUE, _nlm_mem_map::mmp_begin, Nlm_MemFree(), Nlm_MemMapAvailable(), Nlm_MemNew(), Nlm_StringNCpy_0(), NULL, and str().

◆ Nlm_MemMore()

NLM_EXTERN void* LIBCALL Nlm_MemMore	(	void *	ptr,
		size_t	size
	)

Definition at line 276 of file ct_ncbimem.cpp.

References eA_Realloc, MGET_ERRPOST, s_MemAllocator(), and ncbi::grid::netcache::search::fields::size.

◆ Nlm_MemMove()

NLM_EXTERN void* LIBCALL Nlm_MemMove	(	void *	dst,
		const void *	src,
		size_t	bytes
	)

Definition at line 365 of file ct_ncbimem.cpp.

◆ Nlm_MemNew()

BEGIN_CTRANSITION_SCOPE NLM_EXTERN void* LIBCALL Nlm_MemNew ( size_t size )

Definition at line 271 of file ct_ncbimem.cpp.

References eA_Calloc, MGET_ERRPOST, s_MemAllocator(), and ncbi::grid::netcache::search::fields::size.

Referenced by cacher_open(), cacher_read(), compressor_open(), compressor_read(), compressor_write(), fci_open(), Nlm_MemMapInit(), Nlm_rule_line(), and Nlm_text2stream().

◆ Nlm_MemSearch()

NLM_EXTERN size_t LIBCALL Nlm_MemSearch	(	const void *	where,
		size_t	where_size,
		const void *	what,
		size_t	what_size
	)

Definition at line 404 of file ct_ncbimem.cpp.

References i.

◆ Nlm_SearchSubString()

NLM_EXTERN Nlm_CharPtr Nlm_SearchSubString	(	const char FAR *	str,
		Nlm_SubStringData PNTR	data
	)

Definition at line 730 of file ct_ncbistr.cpp.

References data, FAR, i, int, Nlm_StringLen(), NULL, str(), and TO_UPPER.

◆ Nlm_SetHeapLimit()

NLM_EXTERN Nlm_Boolean Nlm_SetHeapLimit	(	size_t	curr,
		size_t	add,
		size_t	max
	)

Definition at line 139 of file ct_ncbimem.cpp.

References FALSE.

◆ Nlm_SetupSubString()

NLM_EXTERN Nlm_Boolean Nlm_SetupSubString	(	const char FAR *	sub,
		Nlm_Boolean	caseCounts,
		Nlm_SubStringData PNTR	data
	)

Definition at line 695 of file ct_ncbistr.cpp.

References data, FALSE, int, MemSet(), Nlm_StringLen(), NULL, TO_UPPER, and TRUE.

◆ Nlm_StringToInt8()

NLM_EXTERN Nlm_Int8 LIBCALL Nlm_StringToInt8	(	const char *	str,
		const char **	endptr
	)

Definition at line 940 of file ct_ncbistr.cpp.

References INT8_MAX, Nlm_Int8, Nlm_Uint8, result, s_StringToUint8(), and str().

Referenced by StringToInt8().

◆ Nlm_StringToUint8()

NLM_EXTERN Nlm_Uint8 LIBCALL Nlm_StringToUint8	(	const char *	str,
		const char **	endptr
	)

Definition at line 933 of file ct_ncbistr.cpp.

References s_StringToUint8(), and str().

Referenced by StringToUint8().

◆ Nlm_Uint8ToString()

NLM_EXTERN char* LIBCALL Nlm_Uint8ToString	(	Nlm_Uint8	value,
		char *	str,
		size_t	str_size
	)

Definition at line 978 of file ct_ncbistr.cpp.

References s_Uint8ToString(), str(), and rapidjson::value.

Referenced by Uint8ToString().

◆ Nlmzip_Compress()

Nlmzip_rc_t Nlmzip_Compress	(	const void *	pInputData,
		Int4	iInputSize,
		void *	pOutputBuff,
		Int4	iOutputSize,
		Int4Ptr	ipCompressedSize
	)

Definition at line 344 of file ct_nlmzip_dcompr.cpp.

References BINARY, iInCurPos, iInDataSize, iOutCurPos, iOutDataSize, MAGIC_KEY, Nlmzip_bi_init(), Nlmzip_ct_init(), Nlmzip_deflate(), NLMZIP_DEFLATED, Nlmzip_level, Nlmzip_lm_init(), Nlmzip_method, NLMZIP_OKAY, Nlmzip_updcrc(), Nlmzip_WriteByte(), Nlmzip_WriteLong(), NULL, OS_CODE, pInBuffer, pOutBuffer, theErrJumper, and ulCrc.

Referenced by compressor_write().

◆ Nlmzip_CrcMode()

Boolean Nlmzip_CrcMode ( Boolean bNewMode )

Definition at line 141 of file ct_nlmzip_util.cpp.

References isGenerateCrcEnable.

◆ Nlmzip_ErrMsg()

const char* Nlmzip_ErrMsg ( Int4 iCode )

Definition at line 520 of file ct_nlmzip_dcompr.cpp.

References CharPtr, int, and theComprErr.

◆ Nlmzip_Uncompress()

Nlmzip_rc_t Nlmzip_Uncompress	(	const void *	pInputData,
		Int4	iInputSize,
		void *	pOutputBuff,
		Int4	iOutputSize,
		Int4Ptr	ipUncompressedSize
	)

Definition at line 422 of file ct_nlmzip_dcompr.cpp.

References iInCurPos, iInDataSize, iOutCurPos, iOutDataSize, LG, MAGIC_KEY, NLMZIP_DEFLATED, Nlmzip_inflate(), Nlmzip_method, NLMZIP_OKAY, Nlmzip_ReadByte(), Nlmzip_ReadData(), Nlmzip_updcrc(), NULL, pInBuffer, pOutBuffer, theErrJumper, and URCOMPRERR.

Referenced by compressor_read(), and CT_DecompressBuffer().

◆ Nlmzip_UncompressedSize()

Int4 Nlmzip_UncompressedSize	(	VoidPtr	pBuffer,
		Int4	iSize
	)

Definition at line 536 of file ct_nlmzip_dcompr.cpp.

References LG.

◆ PROTO() [1/39]

NLM_EXTERN char *LIBCALL Nlm_StrLower PROTO ( (char *string) )

◆ PROTO() [2/39]

NLM_EXTERN Nlm_CharPtr LIBCALL StrCpyPtr PROTO ( (char FAR *Dest, char FAR *Start, char FAR *Stop) )

◆ PROTO() [3/39]

NLM_EXTERN void LIBCALL CleanSpaces PROTO ( (char FAR *Line) )

◆ PROTO() [4/39]

NLM_EXTERN Nlm_CharPtr LIBCALL StrDupPtr PROTO ( (char FAR *Start, char FAR *Stop) )

◆ PROTO() [5/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringTok PROTO ( (char FAR *str1, const char FAR *str2) )

◆ PROTO() [6/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringTokMT PROTO ( (char FAR *str1, const char FAR *str2, char FAR **tmp) )

◆ PROTO() [7/39]

NLM_EXTERN Nlm_CharPtr LIBCALL StringEnd PROTO ( (char FAR *String) )

◆ PROTO() [8/39]

NLM_EXTERN Int4 LIBCALL CountChar PROTO ( (char FAR *String, char Char) )

◆ PROTO() [9/39]

NLM_EXTERN void LIBCALL DeleteChar PROTO ( (char FAR *String, char Delete) )

◆ PROTO() [10/39]

NLM_EXTERN Nlm_CharPtr LIBCALL SkipToSet PROTO ( (char FAR *String, char FAR *CharSet) )

◆ PROTO() [11/39]

NLM_EXTERN Int4 LIBCALL CountStrings PROTO ( (char FAR *String, char FAR *Find) )

◆ PROTO() [12/39]

NLM_EXTERN Nlm_Boolean LIBCALL StringSubString PROTO ( (char FAR *String, char FAR *Find, char FAR *Replace, Nlm_Int4 MaxLength) )

◆ PROTO() [13/39]

NLM_EXTERN Nlm_Boolean LIBCALL StringSubSet PROTO ( (char FAR *String, char FAR *FindSet, char Replace) )

◆ PROTO() [14/39]

NLM_EXTERN Nlm_Int4 LIBCALL CountSet PROTO ( (char FAR *String, char FAR *Set) )

◆ PROTO() [15/39]

NLM_EXTERN Nlm_Boolean LIBCALL StringSub PROTO ( (char FAR *String, char Find, char Replace) )

◆ PROTO() [16/39]

NLM_EXTERN Nlm_Int4 LIBCALL BreakString PROTO ( (char FAR *String, Nlm_CharPtr PNTR Words) )

◆ PROTO() [17/39]

NLM_EXTERN Nlm_CharPtr LIBCALL TruncateStringCopy PROTO ( (char FAR *String, Nlm_Int4 Length) )

◆ PROTO() [18/39]

NLM_EXTERN Nlm_Int4 LIBCALL StringDiff PROTO ( (char FAR *This, char FAR *That) )

◆ PROTO() [19/39]

NLM_EXTERN Nlm_Int4 LIBCALL StringDiffNum PROTO ( (char FAR *This, char FAR *That, Nlm_Int4 NumChars) )

◆ PROTO() [20/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringMove PROTO ( (char FAR *to, const char FAR *from) )

◆ PROTO() [21/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringNCat PROTO ( (char FAR *to, const char FAR *from, size_t max) )

◆ PROTO() [22/39]

NLM_EXTERN size_t LIBCALL Nlm_StringLen PROTO ( (const char *str) )

◆ PROTO() [23/39]

NLM_EXTERN int LIBCALL Nlm_StringICmp PROTO ( (const char FAR *a, const char FAR *b) )

◆ PROTO() [24/39]

NLM_EXTERN int LIBCALL Nlm_StringNICmp PROTO ( (const char FAR *a, const char FAR *b, size_t max) )

◆ PROTO() [25/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringSaveNoNull PROTO ( (const char FAR *from) )

◆ PROTO() [26/39]

NLM_EXTERN Nlm_Boolean LIBCALL Nlm_StringDoesHaveText PROTO ( (const char FAR *str) )

◆ PROTO() [27/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringISearch PROTO ( (const char FAR *str, const char FAR *sub) )

◆ PROTO() [28/39]

NLM_EXTERN size_t LIBCALL Nlm_StringCnt PROTO ( (const char FAR *str, const char FAR *x_list) )

◆ PROTO() [29/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringRChr PROTO ( (const char FAR *str, int chr) )

◆ PROTO() [30/39]

NLM_EXTERN Nlm_Int2 LIBCALL Nlm_MeshStringICmp PROTO ( (const char FAR *str1, const char FAR *str2) )

◆ PROTO() [31/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_text2stream PROTO ( (const Nlm_Char FAR PNTR str) )

◆ PROTO() [32/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_rule_line PROTO ( (const Nlm_Char FAR PNTR str, size_t len, Nlm_enumRuleLine method) )

◆ PROTO() [33/39]

NLM_EXTERN size_t Nlm_stream2text PROTO ( (const Nlm_Char FAR PNTR str, size_t max_col, int PNTR dash) )

◆ PROTO() [34/39]

NLM_EXTERN Nlm_CharPtr LIBCALL Nlm_StringPrintable PROTO ( (const Nlm_Char PNTR str, Nlm_Boolean rn_eol) )

◆ PROTO() [35/39]

NLM_EXTERN void LIBCALL Nlm_LabelCopyNext PROTO ( (Nlm_CharPtr PNTR to, Nlm_CharPtr from, Nlm_Uint4 PNTR buflen) )

◆ PROTO() [36/39]

NLM_EXTERN Nlm_Boolean Nlm_StringIsAllPunctuation PROTO ( (Nlm_CharPtr str) )

◆ PROTO() [37/39]

NLM_EXTERN int LIBCALL Nlm_NaturalStringICmp PROTO ( (Nlm_CharPtr str1, Nlm_CharPtr str2) )

◆ PROTO() [38/39]

NLM_EXTERN Nlm_Uint4 LIBCALL Nlm_LabelCopy PROTO ( (Nlm_CharPtr to, Nlm_CharPtr from, Nlm_Uint4 buflen) )

◆ PROTO() [39/39]

NLM_EXTERN Nlm_Uint4 LIBCALL Nlm_LabelCopyExtra PROTO ( (Nlm_CharPtr to, Nlm_CharPtr from, Nlm_Uint4 buflen, Nlm_CharPtr prefix, Nlm_CharPtr suffix) )

◆ SetupCToolkitErrPost()

void SetupCToolkitErrPost ( void )

Definition at line 146 of file ctools.cpp.

References s_c2cxxErrorHandler(), and TRUE.

◆ StringToInt8()

Nlm_Int8 LIBCALL StringToInt8	(	const char *	str,
		const char **	endptr
	)

inline

Examples: /home/coremake/doxygen/cxx/include/corelib/ncbistr.hpp.

Definition at line 408 of file ncbistr.hpp.

References Nlm_StringToInt8(), and str().

◆ StringToUint8()

Nlm_Uint8 LIBCALL StringToUint8	(	const char *	str,
		const char **	endptr
	)

inline

Definition at line 414 of file ncbistr.hpp.

References Nlm_StringToUint8(), and str().

◆ Uint8ToBytes()

NLM_EXTERN Nlm_Uint1Ptr LIBCALL Uint8ToBytes ( Nlm_Uint8 value )

Definition at line 849 of file ct_ncbistr.cpp.

References i, mask, MemNew, and rapidjson::value.

◆ Uint8ToString()

char* LIBCALL Uint8ToString	(	Nlm_Uint8	value,
		char *	str,
		size_t	str_size
	)

inline

Definition at line 426 of file ncbistr.hpp.

References Nlm_Uint8ToString(), str(), and rapidjson::value.

Variable Documentation

◆ caseCounts

Nlm_Boolean substringdata::caseCounts

Definition at line 367 of file ncbistr.hpp.

◆ close

Int4(* fci_t::close) (Pointer ptr, int commit)

Definition at line 143 of file nlmzip.hpp.

Referenced by cacher_close(), compressor_close(), and fci_open().

◆ d

int substringdata::d[256]

Definition at line 365 of file ncbistr.hpp.

◆ data

Pointer fci_t::data

Definition at line 141 of file nlmzip.hpp.

Referenced by cacher_close(), cacher_read(), cacher_write(), compressor_close(), compressor_read(), compressor_write(), and fci_open().

◆ file_size

Nlm_Int8 _nlm_mem_map::file_size

Definition at line 208 of file ncbimem.hpp.

Referenced by Nlm_MemMapAdvisePtr(), Nlm_MemMapFini(), and Nlm_MemMapInit().

◆ initialized

Nlm_Boolean substringdata::initialized

Definition at line 368 of file ncbistr.hpp.

◆ mmp_begin

Nlm_CharPtr _nlm_mem_map::mmp_begin

Definition at line 209 of file ncbimem.hpp.

Referenced by Nlm_MemMapAdvisePtr(), Nlm_MemMapFini(), and Nlm_MemMapInit().

◆ proc_buf

Int4(* fci_t::proc_buf) (Pointer ptr, CharPtr buf, Int4 count)

Definition at line 142 of file nlmzip.hpp.

Referenced by cacher_close(), cacher_read(), cacher_write(), compressor_read(), compressor_write(), and fci_open().

◆ sub

const char FAR* substringdata::sub

Definition at line 369 of file ncbistr.hpp.

◆ subLen

size_t substringdata::subLen

Definition at line 366 of file ncbistr.hpp.

◆ USING_NCBI_SCOPE

BEGIN_CTRANSITION_SCOPE USING_NCBI_SCOPE

Definition at line 121 of file nlmzip.hpp.

Classes

Macros

Typedefs

Enumerations

Functions

Variables

Detailed Description

Macro Definition Documentation

◆ ABS

◆ BEGIN_CTRANSITION_SCOPE

◆ BIG_ENDIAN

◆ BigScalar

◆ Boolean

◆ BoolPtr

◆ Byte

◆ BYTE_MAX

◆ BYTE_ORDER

◆ BytePtr

◆ Calloc

◆ CDECL

◆ Char

◆ CharPtr

◆ COMP_GNU

◆ CompressSpaces

◆ DIM

◆ dll_Free

◆ dll_Malloc

◆ E_NoMemory

◆ E_Programmer

◆ END_CTRANSITION_SCOPE

◆ enumRuleLine

◆ ErrPostEx

◆ ErrPostStr

◆ ErrSetLog

◆ EXPORT

◆ FALSE

◆ FAR

◆ FCI_CLOSE

◆ FCI_READ

◆ FloatHi

◆ FloatHiPtr

◆ FloatLo

◆ FloatLoPtr

◆ FnPtr

◆ Free

◆ HandFree

◆ HandGet

◆ Handle

◆ HandLock

◆ HandMore

◆ HandNew

◆ HandUnlock

◆ HNDL

◆ INLINE [1/2]

◆ INLINE [2/2]

◆ Int1

◆ INT1_MAX

◆ INT1_MIN

◆ Int1Ptr

◆ Int2

◆ INT2_MAX

◆ INT2_MIN

◆ Int2Ptr

◆ Int4

◆ INT4_MAX

◆ INT4_MIN

◆ Int4Ptr

◆ Int8

◆ INT8_MAX

◆ INT8_MIN

◆ Int8Ptr

◆ IS_ALPHA

◆ IS_ALPHANUM

◆ IS_DIGIT

◆ IS_LOWER

◆ IS_PRINT

◆ IS_UPPER

◆ IS_WHITESP

◆ LabelCopy

◆ LabelCopyExtra