GUI Core Classes and Modules

Core routines offering full framework support for Genome Workbench and other GUI applications. More...

Collaboration diagram for GUI Core Classes and Modules:

Modules
	Plugin Architecture Support Classes
	Document/View Architecture Support Classes
	overridables

Classes
class	CTableView
	CTableView. More...
class	CTableViewFactory
	CTableViewFactory. More...
class	CProjectTableViewFactory
	CProjectTableViewFactory. More...
class	CAsnObjectLoader
	CAsnObjectLoader. More...
class	CLBLASTObjectLoader
	CLBLASTObjectLoader. More...
class	CRMObjectLoader
class	CTableObjectLoader
	CTableObjectLoader. More...

Typedefs
typedef vector< CRef< CObject > >	CAsnObjectLoader::TOrigObjects
typedef CRef< objects::CSeq_annot >	CTableObjectLoader::TAnnotRef

Functions
	CTableView::CTableView ()
virtual void	CTableView::x_OnSetSelection (CSelectionEvent &evt)
	override in derived classes in order to handle selection broadcast More...
virtual CIRef< ITableData >	CTableView::x_CreateTableData (TConstScopedObjects &objects)
void	CTableView::x_OnUrlHover (CEvent *evt)
void	CTableView::x_QueryStatusChange (CEvent *evt)
void	CTableView::x_OnRowDClick (CEvent *evt)
	CTableView::DECLARE_EVENT_MAP ()
	CAsnObjectLoader::CAsnObjectLoader ()
	CAsnObjectLoader::CAsnObjectLoader (const vector< wxString > &filenames)
	CAsnObjectLoader::CAsnObjectLoader (const string &asnTextData)
void	CAsnObjectLoader::Init ()
void	CAsnObjectLoader::LoadFromStream (CNcbiIstream &istr, TObjects &objects, ESerialDataFormat fmt, ICanceled *canceled=0)
bool	CAsnObjectLoader::x_OnTopObjectFound (const CObjectInfo &objInfo)
	CLBLASTObjectLoader::CLBLASTObjectLoader (const CLBLASTLoadParams &params)
static CRef< objects::CLoaderDescriptor >	CLBLASTObjectLoader::CreateLoader (const string &db, bool nucleotide)
static string	CLBLASTObjectLoader::GetLoaderName (const objects::CUser_object &obj)
static string	CLBLASTObjectLoader::AddDataLoader (const objects::CUser_object &obj)
static int	CLBLASTObjectLoader::CountSeqs (const string &db, bool proteins)
static string	CLBLASTObjectLoader::x_GetQuotedDBName (const string db)
	CRMObjectLoader::CRMObjectLoader (const vector< wxString > &filenames)
void	CRMObjectLoader::x_ReadAsnObject (ESerialDataFormat sfmt, CNcbiIstream &istream)
bool	CRMObjectLoader::x_OnTopObjectFound (const CObjectInfo &objInfo)
	CTableObjectLoader::CTableObjectLoader (CTableAnnotDataSource &annotTableData, const vector< wxString > &filenames)

Variables
TConstScopedObjects	CTableView::m_OrigObjects
wxWindow *	CTableView::m_Window
vector< wxString >	CAsnObjectLoader::m_FileNames
const string	CAsnObjectLoader::m_AsnTextData
TObjects	CAsnObjectLoader::m_Objects
	Final complete object list with description set. More...
TOrigObjects	CAsnObjectLoader::m_OrigObjects
	Original object list for current file. More...
wxString	CAsnObjectLoader::m_CurrentFileName
CRef< objects::CScope >	CAsnObjectLoader::m_Scope
string	CLBLASTObjectLoader::m_Dir
TObjects	CLBLASTObjectLoader::m_Objects
CRef< objects::CScope >	CLBLASTObjectLoader::m_Scope
CRef< objects::CLoaderDescriptor >	CLBLASTObjectLoader::m_Loader
CLBLASTLoadParams	CLBLASTObjectLoader::m_Params
vector< wxString >	CRMObjectLoader::m_FileNames
const string	CRMObjectLoader::m_AsnTextData
TObjects	CRMObjectLoader::m_Objects
wxString	CRMObjectLoader::m_CurrentFileName
CRef< objects::CScope >	CRMObjectLoader::m_Scope
TObjects	CTableObjectLoader::m_Objects

Friends
class	CTableView::CTableViewFactory
class	CAsnObjectLoader::CSniffReader
class	CRMObjectLoader::CSniffReader

IWMClient interface implementation
virtual wxWindow *	CTableView::GetWindow ()
	returns a pointer to the wxWindow representing the client More...
virtual wxEvtHandler *	CTableView::GetCommandHandler ()
	IWMClient implementation. More...

IView implementation
@(
virtual const CViewTypeDescriptor &	CTableView::GetTypeDescriptor () const
	return an object providing meta information about thei view type More...
virtual void	CTableView::CreateViewWindow (wxWindow *parent)
	create Window corresponding to the view More...
virtual void	CTableView::DestroyViewWindow ()
	destroy Window corresponding to the view More...

IProjectView implementation
virtual bool	CTableView::InitView (TConstScopedObjects &objects, const objects::CUser_object *params)
	initialize view with data, inside this function the view must call CProjectService::AttachView to connect to a project More...
virtual void	CTableView::OnProjectChanged (CProjectViewEvent &evt)

ISelectionClient Implementation
virtual void	CTableView::GetSelection (CSelectionEvent &evt) const
	get selection for broadcasting More...
virtual void	CTableView::GetSelection (TConstScopedObjects &objs) const
	shall return data objects representing selected things, return one data object for every selected thing. More...
virtual void	CTableView::GetMainObject (TConstScopedObjects &objs) const
	Adds the main data objects represented by the client to "objects". More...

IRegSettings interface implementation
virtual void	CTableView::SetRegistryPath (const string &reg_path)
virtual void	CTableView::LoadSettings ()
virtual void	CTableView::SaveSettings () const

IExtension interface implementation
virtual string	CTableViewFactory::GetExtensionIdentifier () const
	CTableViewFactory. More...
virtual string	CTableViewFactory::GetExtensionLabel () const
	returns a displayable label for this extension ( please capitalize the key words - "My Extension" ) More...

IProjectViewFactory interface implementation
virtual IView *	CTableViewFactory::CreateInstance () const
	creates a view instance More...
virtual IView *	CTableViewFactory::CreateInstanceByFingerprint (const TFingerprint &fingerprint) const
	if fingerprint is recognized - creates and returns a new instance More...
virtual void	CTableViewFactory::RegisterIconAliases (wxFileArtProvider &provider)
	called by the framework to give Factory a chance to register images used by view More...
virtual const CProjectViewTypeDescriptor &	CTableViewFactory::GetProjectViewTypeDescriptor () const
	returns a Descriptor for the View Type supported by the Factory More...
virtual int	CTableViewFactory::TestInputObjects (TConstScopedObjects &objects)
	tests input objects (not using object conversion) and returns a combination of ETestResult flags better name is IsCompatibleWith() More...

COpenViewManager implementation
virtual string	CTableViewFactory::GetTargetType () const
virtual bool	CTableViewFactory::AllowMerge () const

IExtension interface implementation
virtual string	CProjectTableViewFactory::GetExtensionIdentifier () const
	CProjectTableViewFactory. More...
virtual string	CProjectTableViewFactory::GetExtensionLabel () const
	returns a displayable label for this extension ( please capitalize the key words - "My Extension" ) More...

IProjectViewFactory interface implementation
virtual IView *	CProjectTableViewFactory::CreateInstance () const
	creates a view instance More...
virtual IView *	CProjectTableViewFactory::CreateInstanceByFingerprint (const TFingerprint &fingerprint) const
	if fingerprint is recognized - creates and returns a new instance More...
virtual void	CProjectTableViewFactory::RegisterIconAliases (wxFileArtProvider &provider)
	called by the framework to give Factory a chance to register images used by view More...
virtual const CProjectViewTypeDescriptor &	CProjectTableViewFactory::GetProjectViewTypeDescriptor () const
	returns a Descriptor for the View Type supported by the Factory More...
virtual bool	CProjectTableViewFactory::IsCompatibleWith (const CObject &object, objects::CScope &scope)
virtual int	CProjectTableViewFactory::TestInputObjects (TConstScopedObjects &objects)
	tests input objects (not using object conversion) and returns a combination of ETestResult flags better name is IsCompatibleWith() More...
virtual bool	CProjectTableViewFactory::ShowInOpenViewDlg () const

IObjectLoader implementation
virtual TObjects &	CAsnObjectLoader::GetObjects ()
virtual string	CAsnObjectLoader::GetDescription () const

IExecuteUnit implementation
virtual bool	CAsnObjectLoader::PreExecute ()
virtual bool	CAsnObjectLoader::Execute (ICanceled &canceled)
virtual bool	CAsnObjectLoader::PostExecute ()

IObjectLoader implementation
virtual TObjects &	CLBLASTObjectLoader::GetObjects ()
virtual string	CLBLASTObjectLoader::GetDescription () const
virtual CObject *	CLBLASTObjectLoader::GetLoader ()

IExecuteUnit implementation
virtual bool	CLBLASTObjectLoader::PreExecute ()
virtual bool	CLBLASTObjectLoader::Execute (ICanceled &canceled)
virtual bool	CLBLASTObjectLoader::PostExecute ()

IObjectLoader implementation
virtual TObjects &	CRMObjectLoader::GetObjects ()
virtual string	CRMObjectLoader::GetDescription () const

IExecuteUnit implementation
virtual bool	CRMObjectLoader::PreExecute ()
virtual bool	CRMObjectLoader::Execute (ICanceled &canceled)
virtual bool	CRMObjectLoader::PostExecute ()

IObjectLoader implementation
virtual TObjects &	CTableObjectLoader::GetObjects ()
virtual string	CTableObjectLoader::GetDescription () const

IExecuteUnit implementation
virtual bool	CTableObjectLoader::PreExecute ()
virtual bool	CTableObjectLoader::Execute (ICanceled &)
virtual bool	CTableObjectLoader::PostExecute ()

Detailed Description

Core routines offering full framework support for Genome Workbench and other GUI applications.

The core framework provides support for managing plugins as well as support for the document/view architecture of Genome Workbench

Typedef Documentation

TAnnotRef

typedef CRef<objects::CSeq_annot> CTableObjectLoader::TAnnotRef

Definition at line 63 of file table_object_loader.hpp.

TOrigObjects

typedef vector< CRef<CObject> > CAsnObjectLoader::TOrigObjects

Definition at line 69 of file asn_object_loader.hpp.

Function Documentation

AddDataLoader()

string CLBLASTObjectLoader::AddDataLoader ( const objects::CUser_object &  obj )

static

Definition at line 144 of file lblast_object_loader.cpp.

References CObjectManager::eNonDefault, CBlastDbDataLoader::eNucleotide, CBlastDbDataLoader::eProtein, CUser_field_Base::C_Data::GetBool(), CUser_field_Base::GetData(), CObjectManager::GetInstance(), CUser_field_Base::C_Data::GetStr(), info, kBLASTDir, kLoaderDataType, kLoaderPriority, kProteins, CBlastDbDataLoader::RegisterInObjectManager(), and CLBLASTObjectLoader::x_GetQuotedDBName().

Referenced by CLBLASTUIDataSource::AddDataLoader().

AllowMerge()

virtual bool CTableViewFactory::AllowMerge ( ) const

inlineprotectedvirtual

Definition at line 145 of file table_view.hpp.

CAsnObjectLoader() [1/3]

CAsnObjectLoader::CAsnObjectLoader

(

)

Definition at line 123 of file asn_object_loader.cpp.

CAsnObjectLoader() [2/3]

CAsnObjectLoader::CAsnObjectLoader

(

const string &

asnTextData

)

Definition at line 132 of file asn_object_loader.cpp.

CAsnObjectLoader() [3/3]

CAsnObjectLoader::CAsnObjectLoader

(

const vector< wxString > &

filenames

)

Definition at line 127 of file asn_object_loader.cpp.

CLBLASTObjectLoader()

CLBLASTObjectLoader::CLBLASTObjectLoader

(

const CLBLASTLoadParams &

params

)

Definition at line 50 of file lblast_object_loader.cpp.

CountSeqs()

int CLBLASTObjectLoader::CountSeqs ( const string &  db, bool  proteins  )

static

Definition at line 208 of file lblast_object_loader.cpp.

References count, CSeqDB::eNucleotide, CSeqDB::eProtein, CSeqDB::GetNumSeqs(), and CLBLASTObjectLoader::x_GetQuotedDBName().

Referenced by CLBLASTParamsPanel::x_UpdateSeqCount().

CreateInstance() [1/2]

IView * CTableViewFactory::CreateInstance ( ) const

virtual

creates a view instance

Implements IViewFactory.

Definition at line 323 of file table_view.cpp.

CreateInstance() [2/2]

IView * CProjectTableViewFactory::CreateInstance ( ) const

virtual

creates a view instance

Implements IViewFactory.

Definition at line 436 of file table_view.cpp.

CreateInstanceByFingerprint() [1/2]

IView * CTableViewFactory::CreateInstanceByFingerprint ( const TFingerprint &  fingerprint ) const

virtual

if fingerprint is recognized - creates and returns a new instance

Implements IViewFactory.

Definition at line 329 of file table_view.cpp.

References NULL.

CreateInstanceByFingerprint() [2/2]

IView * CProjectTableViewFactory::CreateInstanceByFingerprint ( const TFingerprint &  fingerprint ) const

virtual

if fingerprint is recognized - creates and returns a new instance

Implements IViewFactory.

Definition at line 451 of file table_view.cpp.

References NULL.

CreateLoader()

CRef< CLoaderDescriptor > CLBLASTObjectLoader::CreateLoader ( const string &  db, bool  nucleotide  )

static

Definition at line 81 of file lblast_object_loader.cpp.

References data, CSeqDB::eNucleotide, CSeqDB::eProtein, CSeqDB::GetTitle(), kBLASTDir, kLoaderDataType, kLoaderPriority, kProteins, kUILabel, label, CRef< C, Locker >::Reset(), StringToAscii(), and CLBLASTObjectLoader::x_GetQuotedDBName().

Referenced by CLBLASTObjectLoader::Execute(), and CBLASTSeqToolJob::x_CreateProjectItems().

CreateViewWindow()

void CTableView::CreateViewWindow ( wxWindow *  parent )

virtual

create Window corresponding to the view

Implements CProjectViewBase.

Reimplemented in CAlnSummaryView.

Definition at line 158 of file table_view.cpp.

References _ASSERT, CEventHandler::AddListener(), CEventHandler::ePool_Parent, CTableView::m_Window, and wxID_ANY.

CRMObjectLoader()

CRMObjectLoader::CRMObjectLoader

(

const vector< wxString > &

filenames

)

Definition at line 48 of file rm_object_loader.cpp.

CTableObjectLoader()

CTableObjectLoader::CTableObjectLoader	(	CTableAnnotDataSource &	annotTableData,
		const vector< wxString > &	filenames
	)

Definition at line 43 of file table_object_loader.cpp.

References filenames, CTableAnnotDataSource::GetContainer(), CTableObjectLoader::m_Objects, and ToStdString().

CTableView()

CTableView::CTableView

(

)

Definition at line 73 of file table_view.cpp.

DECLARE_EVENT_MAP()

CTableView::DECLARE_EVENT_MAP ( )

protected

DestroyViewWindow()

void CTableView::DestroyViewWindow ( )

virtual

destroy Window corresponding to the view

Implements CProjectViewBase.

Definition at line 168 of file table_view.cpp.

References CTableView::m_Window.

Execute() [1/4]

virtual bool CTableObjectLoader::Execute ( ICanceled &  )

inlinevirtual

Implements IExecuteUnit.

Definition at line 76 of file table_object_loader.hpp.

Execute() [2/4]

bool CAsnObjectLoader::Execute ( ICanceled &  canceled )

virtual

Implements IExecuteUnit.

Definition at line 161 of file asn_object_loader.cpp.

References CFormatGuess::eBinaryASN, eSerial_AsnBinary, eSerial_AsnText, eSerial_None, eSerial_Xml, CFormatGuess::eTextASN, CFormatGuess::eUnknown, CFormatGuess::eXml, file, Info(), CAsnObjectLoader::Init(), ICanceled::IsCanceled(), ITERATE, kMemoryObject, CAsnObjectLoader::LoadFromStream(), LOG_POST, CAsnObjectLoader::m_AsnTextData, CAsnObjectLoader::m_CurrentFileName, CAsnObjectLoader::m_FileNames, CAsnObjectLoader::m_Objects, NStr::Split(), CException::what(), wxT, and CReportLoaderErrors::x_UpdateHTMLResults().

Execute() [3/4]

bool CLBLASTObjectLoader::Execute ( ICanceled &  canceled )

virtual

Implements IExecuteUnit.

Definition at line 174 of file lblast_object_loader.cpp.

References CScope::AddDefaults(), CSeqDB::CheckOrFindOID(), CLBLASTObjectLoader::CreateLoader(), CLabel::eDefault, CSeqDB::eNucleotide, CSeqDB::eProtein, CLBLASTLoadParams::GetCreateSeqs(), CObjectManager::GetInstance(), CLabel::GetLabel(), CLBLASTLoadParams::GetNucDB(), CLBLASTLoadParams::GetProtDB(), CLBLASTLoadParams::GetProtSeqs(), CSeqDB::GetSeqIDs(), ICanceled::IsCanceled(), label, CLBLASTObjectLoader::m_Loader, CLBLASTObjectLoader::m_Objects, CLBLASTObjectLoader::m_Params, NON_CONST_ITERATE, string, and CLBLASTObjectLoader::x_GetQuotedDBName().

Execute() [4/4]

bool CRMObjectLoader::Execute ( ICanceled &  canceled )

virtual

Implements IExecuteUnit.

Definition at line 68 of file rm_object_loader.cpp.

References CScope::AddDefaults(), CLabel::eDefault, IRmReaderFlags::fDefaults, file, CObjectManager::GetInstance(), CLabel::GetLabel(), CException::GetMsg(), CRef< C, Locker >::GetPointer(), ICanceled::IsCanceled(), ITERATE, label, CRMObjectLoader::m_FileNames, CRMObjectLoader::m_Objects, CRepeatMaskerReader::ReadSeqAnnot(), CRef< C, Locker >::Reset(), CReaderBase::SetCanceler(), CException::what(), and CReportLoaderErrors::x_UpdateHTMLResults().

GetCommandHandler()

wxEvtHandler * CTableView::GetCommandHandler ( )

virtual

IWMClient implementation.

Reimplemented from CProjectViewBase.

Definition at line 94 of file table_view.cpp.

References _ASSERT, and CTableView::m_Window.

GetDescription() [1/4]

string CAsnObjectLoader::GetDescription ( void  ) const

virtual

Implements IObjectLoader.

Definition at line 142 of file asn_object_loader.cpp.

GetDescription() [2/4]

string CLBLASTObjectLoader::GetDescription ( void  ) const

virtual

Implements IObjectLoader.

Definition at line 60 of file lblast_object_loader.cpp.

GetDescription() [3/4]

string CRMObjectLoader::GetDescription ( void  ) const

virtual

Implements IObjectLoader.

Definition at line 58 of file rm_object_loader.cpp.

GetDescription() [4/4]

string CTableObjectLoader::GetDescription ( void  ) const

virtual

Implements IObjectLoader.

Definition at line 59 of file table_object_loader.cpp.

GetExtensionIdentifier() [1/2]

string CTableViewFactory::GetExtensionIdentifier ( ) const

virtual

CTableViewFactory.

Implements IExtension.

Definition at line 296 of file table_view.cpp.

GetExtensionIdentifier() [2/2]

string CProjectTableViewFactory::GetExtensionIdentifier ( ) const

virtual

CProjectTableViewFactory.

Implements IExtension.

Definition at line 411 of file table_view.cpp.

GetExtensionLabel() [1/2]

string CTableViewFactory::GetExtensionLabel ( ) const

virtual

returns a displayable label for this extension ( please capitalize the key words - "My Extension" )

Implements IExtension.

Definition at line 303 of file table_view.cpp.

GetExtensionLabel() [2/2]

string CProjectTableViewFactory::GetExtensionLabel ( ) const

virtual

returns a displayable label for this extension ( please capitalize the key words - "My Extension" )

Implements IExtension.

Definition at line 418 of file table_view.cpp.

GetLoader()

CObject * CLBLASTObjectLoader::GetLoader ( )

virtual

Reimplemented from IObjectLoader.

Definition at line 65 of file lblast_object_loader.cpp.

References CRef< C, Locker >::GetPointerOrNull(), and CLBLASTObjectLoader::m_Loader.

GetLoaderName()

string CLBLASTObjectLoader::GetLoaderName ( const objects::CUser_object &  obj )

static

Definition at line 116 of file lblast_object_loader.cpp.

References CSeqDB::eNucleotide, CSeqDB::eProtein, CUser_field_Base::C_Data::GetBool(), CUser_field_Base::GetData(), CBlastDbDataLoader::GetLoaderNameFromArgs(), CUser_field_Base::C_Data::GetStr(), kBLASTDir, kLoaderDataType, kProteins, and CLBLASTObjectLoader::x_GetQuotedDBName().

Referenced by CLBLASTUIDataSource::GetLoaderName().

GetMainObject()

void CTableView::GetMainObject ( TConstScopedObjects &  objects ) const

virtual

Adds the main data objects represented by the client to "objects".

Implementation shall not clear the container as it can be used for accumulating objects.

Reimplemented from CProjectView.

Definition at line 207 of file table_view.cpp.

References CConstRef< C, Locker >::GetPointer(), CRef< C, Locker >::GetPointer(), CTableView::m_OrigObjects, CTableView::m_Window, SConstScopedObject::object, SConstScopedObject::scope, and CProjectViewBase::x_HasProject().

Referenced by CProjectTableView::OnProjectChanged().

GetObjects() [1/4]

IObjectLoader::TObjects & CAsnObjectLoader::GetObjects ( )

virtual

Implements IObjectLoader.

Definition at line 137 of file asn_object_loader.cpp.

References CAsnObjectLoader::m_Objects.

GetObjects() [2/4]

IObjectLoader::TObjects & CLBLASTObjectLoader::GetObjects ( )

virtual

Implements IObjectLoader.

Definition at line 55 of file lblast_object_loader.cpp.

References CLBLASTObjectLoader::m_Objects.

GetObjects() [3/4]

IObjectLoader::TObjects & CRMObjectLoader::GetObjects ( )

virtual

Implements IObjectLoader.

Definition at line 53 of file rm_object_loader.cpp.

References CRMObjectLoader::m_Objects.

GetObjects() [4/4]

IObjectLoader::TObjects & CTableObjectLoader::GetObjects ( )

virtual

Implements IObjectLoader.

Definition at line 54 of file table_object_loader.cpp.

References CTableObjectLoader::m_Objects.

GetProjectViewTypeDescriptor() [1/2]

const CProjectViewTypeDescriptor & CTableViewFactory::GetProjectViewTypeDescriptor ( ) const

virtual

returns a Descriptor for the View Type supported by the Factory

Implements IProjectViewFactory.

Definition at line 317 of file table_view.cpp.

References s_TableViewTypeDescr.

GetProjectViewTypeDescriptor() [2/2]

const CProjectViewTypeDescriptor & CProjectTableViewFactory::GetProjectViewTypeDescriptor ( ) const

virtual

returns a Descriptor for the View Type supported by the Factory

Implements IProjectViewFactory.

Definition at line 430 of file table_view.cpp.

References s_ProjectTableViewTypeDescr.

GetSelection() [1/2]

void CTableView::GetSelection ( CSelectionEvent &  evt ) const

virtual

get selection for broadcasting

Reimplemented from CProjectView.

Definition at line 183 of file table_view.cpp.

References CTableView::m_Window, and CProjectViewBase::x_HasProject().

GetSelection() [2/2]

void CTableView::GetSelection ( TConstScopedObjects &  objects ) const

virtual

shall return data objects representing selected things, return one data object for every selected thing.

Implementation shall not clear the container as it can be used for accumulating objects.

Reimplemented from CProjectView.

Definition at line 199 of file table_view.cpp.

References CTableView::m_Window, and CProjectViewBase::x_HasProject().

GetTargetType()

virtual string CTableViewFactory::GetTargetType ( ) const

inlineprotectedvirtual

Definition at line 143 of file table_view.hpp.

GetTypeDescriptor()

const CViewTypeDescriptor & CTableView::GetTypeDescriptor ( ) const

virtual

return an object providing meta information about thei view type

Implements CProjectViewBase.

Reimplemented in CAlnSummaryView, and CProjectTableView.

Definition at line 178 of file table_view.cpp.

References s_TableViewTypeDescr.

GetWindow()

virtual wxWindow* CTableView::GetWindow ( )

virtual

returns a pointer to the wxWindow representing the client

Implements CProjectViewBase.

Referenced by CProjectTableView::OnProjectChanged().

Init()

void CAsnObjectLoader::Init

(

void

)

Definition at line 154 of file asn_object_loader.cpp.

References CObjectManager::GetInstance(), CAsnObjectLoader::m_Scope, and CRef< C, Locker >::Reset().

Referenced by CAsnObjectLoader::Execute().

InitView()

bool CTableView::InitView ( TConstScopedObjects &  objects, const objects::CUser_object *  params  )

virtual

initialize view with data, inside this function the view must call CProjectService::AttachView to connect to a project

Reimplemented from CProjectView.

Definition at line 108 of file table_view.cpp.

References _ASSERT, IServiceLocator::GetServiceByType(), CGBDocument::GetUndoManager(), CGridWidget::Init(), CTableView::m_OrigObjects, CTableView::m_Window, CProjectViewBase::m_Workbench, NULL, CRef< C, Locker >::Reset(), CGridWidget::SetTableSelection(), CProjectViewBase::x_AttachToProject(), CTableView::x_CreateTableData(), CProjectViewBase::x_ReportInvalidInputData(), and CProjectViewBase::x_UpdateContentLabel().

IsCompatibleWith()

bool CProjectTableViewFactory::IsCompatibleWith ( const CObject &  object, objects::CScope &  scope  )

virtual

Reimplemented from IProjectViewFactory.

Definition at line 442 of file table_view.cpp.

References type.

Referenced by CProjectTableViewFactory::TestInputObjects().

LoadFromStream()

void CAsnObjectLoader::LoadFromStream	(	CNcbiIstream &	istr,
		TObjects &	objects,
		ESerialDataFormat	fmt,
		ICanceled *	canceled = 0
	)

Definition at line 250 of file asn_object_loader.cpp.

References CObjectsSniffer::AddCandidate(), copy(), CLabel::eDefault, eSerial_AsnText, eSerial_None, eSerial_Xml, CLabel::GetLabel(), CBioTreeContainer_Base::GetLabel(), CRef< C, Locker >::GetPointer(), Info(), info, CBioTreeContainer_Base::IsSetLabel(), kMemoryObject, label, LOG_POST, CAsnObjectLoader::m_CurrentFileName, CAsnObjectLoader::m_OrigObjects, CAsnObjectLoader::m_Scope, NON_CONST_ITERATE, CSniffReader::ObjectLoaded(), CObjectIStream::Open(), CObjectsSniffer::Probe(), CRef< C, Locker >::Reset(), CSeq_annot_Base::SetData(), CBioTreeContainer_Base::SetLabel(), CSeq_annot::SetNameDesc(), CObjectsSniffer::SetReportDataErrors(), CSeq_entry_Base::SetSeq(), CSeq_entry_Base::SetSet(), CSeq_annot::SetTitleDesc(), and ToStdString().

Referenced by CAsnObjectLoader::Execute().

LoadSettings()

void CTableView::LoadSettings ( )

virtual

Implements IRegSettings.

Definition at line 277 of file table_view.cpp.

References IRegSettings::LoadSettings(), and CTableView::m_Window.

OnProjectChanged()

void CTableView::OnProjectChanged ( CProjectViewEvent &  evt )

virtual

Reimplemented from CProjectViewBase.

Reimplemented in CProjectTableView.

Definition at line 146 of file table_view.cpp.

References CProjectViewEvent::eBothPropsData, CProjectViewEvent::eData, CProjectViewEvent::eDataChanging, CProjectViewEvent::GetSubtype(), and CTableView::m_Window.

PostExecute() [1/4]

bool CAsnObjectLoader::PostExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 421 of file asn_object_loader.cpp.

References wxT, and CReportLoaderErrors::x_ShowErrorsDlg().

PostExecute() [2/4]

bool CLBLASTObjectLoader::PostExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 226 of file lblast_object_loader.cpp.

PostExecute() [3/4]

bool CRMObjectLoader::PostExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 106 of file rm_object_loader.cpp.

References wxT, and CReportLoaderErrors::x_ShowErrorsDlg().

PostExecute() [4/4]

virtual bool CTableObjectLoader::PostExecute ( )

inlinevirtual

Implements IExecuteUnit.

Definition at line 77 of file table_object_loader.hpp.

PreExecute() [1/4]

bool CAsnObjectLoader::PreExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 147 of file asn_object_loader.cpp.

PreExecute() [2/4]

bool CLBLASTObjectLoader::PreExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 70 of file lblast_object_loader.cpp.

PreExecute() [3/4]

bool CRMObjectLoader::PreExecute ( )

virtual

Implements IExecuteUnit.

Definition at line 63 of file rm_object_loader.cpp.

PreExecute() [4/4]

virtual bool CTableObjectLoader::PreExecute ( )

inlinevirtual

Implements IExecuteUnit.

Definition at line 75 of file table_object_loader.hpp.

RegisterIconAliases() [1/2]

void CTableViewFactory::RegisterIconAliases ( wxFileArtProvider &  provider )

virtual

called by the framework to give Factory a chance to register images used by view

Implements IViewFactory.

Definition at line 310 of file table_view.cpp.

References CUIObject::GetIconAlias(), IProjectViewFactory::GetViewTypeDescriptor(), wxFileArtProvider::RegisterFileAlias(), ToWxString(), and wxT.

RegisterIconAliases() [2/2]

void CProjectTableViewFactory::RegisterIconAliases ( wxFileArtProvider &  provider )

virtual

called by the framework to give Factory a chance to register images used by view

Implements IViewFactory.

Definition at line 425 of file table_view.cpp.

SaveSettings()

void CTableView::SaveSettings ( ) const

virtual

Implements IRegSettings.

Definition at line 285 of file table_view.cpp.

References CTableView::m_Window, and IRegSettings::SaveSettings().

SetRegistryPath()

void CTableView::SetRegistryPath ( const string &  reg_path )

virtual

Implements IRegSettings.

Definition at line 270 of file table_view.cpp.

References CTableView::m_Window, and IRegSettings::SetRegistryPath().

ShowInOpenViewDlg()

virtual bool CProjectTableViewFactory::ShowInOpenViewDlg ( ) const

inlinevirtual

Reimplemented from IProjectViewFactory.

Definition at line 173 of file table_view.hpp.

TestInputObjects() [1/2]

int CTableViewFactory::TestInputObjects ( TConstScopedObjects &  objects )

virtual

tests input objects (not using object conversion) and returns a combination of ETestResult flags better name is IsCompatibleWith()

Implements IProjectViewFactory.

Definition at line 335 of file table_view.cpp.

References IProjectViewFactory::fCanShowAll, IProjectViewFactory::fCanShowSeparated, IProjectViewFactory::fCanShowSome, and i.

TestInputObjects() [2/2]

int CProjectTableViewFactory::TestInputObjects ( TConstScopedObjects &  objects )

virtual

tests input objects (not using object conversion) and returns a combination of ETestResult flags better name is IsCompatibleWith()

Implements IProjectViewFactory.

Definition at line 457 of file table_view.cpp.

References IProjectViewFactory::fCanShowAll, IProjectViewFactory::fCanShowSeparated, IProjectViewFactory::fCanShowSome, i, and CProjectTableViewFactory::IsCompatibleWith().

x_CreateTableData()

CIRef< ITableData > CTableView::x_CreateTableData ( TConstScopedObjects &  objects )

protectedvirtual

Reimplemented in CAlnSummaryView.

Definition at line 259 of file table_view.cpp.

References NULL, and CRef< C, Locker >::Reset().

Referenced by CTableView::InitView().

x_GetQuotedDBName()

string CLBLASTObjectLoader::x_GetQuotedDBName ( const string  db )

staticprivate

Definition at line 221 of file lblast_object_loader.cpp.

Referenced by CLBLASTObjectLoader::AddDataLoader(), CLBLASTObjectLoader::CountSeqs(), CLBLASTObjectLoader::CreateLoader(), CLBLASTObjectLoader::Execute(), and CLBLASTObjectLoader::GetLoaderName().

x_OnRowDClick()

void CTableView::x_OnRowDClick ( CEvent *  evt )

protected

Definition at line 242 of file table_view.cpp.

References CEvent::eEvent_Message, CEventHandler::ePool_Parent, CViewEvent::eWidgetItemActivated, and CEventHandler::Send().

x_OnSetSelection()

void CTableView::x_OnSetSelection ( CSelectionEvent &  evt )

protectedvirtual

override in derived classes in order to handle selection broadcast

override this function in derived classes

Reimplemented from CProjectView.

Definition at line 191 of file table_view.cpp.

References CTableView::m_Window, and CProjectViewBase::x_HasProject().

x_OnTopObjectFound() [1/2]

bool CAsnObjectLoader::x_OnTopObjectFound ( const CObjectInfo &  objInfo )

private

Definition at line 408 of file asn_object_loader.cpp.

References eTypeFamilyChoice, eTypeFamilyClass, CObjectInfo::GetObjectPtr(), CObjectTypeInfo::GetTypeFamily(), and CAsnObjectLoader::m_OrigObjects.

x_OnTopObjectFound() [2/2]

bool CRMObjectLoader::x_OnTopObjectFound ( const CObjectInfo &  objInfo )

private

x_OnUrlHover()

void CTableView::x_OnUrlHover ( CEvent *  evt )

protected

Definition at line 224 of file table_view.cpp.

References IServiceLocator::GetServiceByType(), CGridWidgetEvent::GetURL(), CProjectViewBase::m_Workbench, and ToStdString().

x_QueryStatusChange()

void CTableView::x_QueryStatusChange ( CEvent *  evt )

protected

Definition at line 233 of file table_view.cpp.

References IServiceLocator::GetServiceByType(), CQueryPanelEvent::GetStatus(), and CProjectViewBase::m_Workbench.

x_ReadAsnObject()

void CRMObjectLoader::x_ReadAsnObject ( ESerialDataFormat  sfmt, CNcbiIstream &  istream  )

private

Variable Documentation

m_AsnTextData [1/2]

const string CAsnObjectLoader::m_AsnTextData

private

Definition at line 95 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::Execute().

m_AsnTextData [2/2]

const string CRMObjectLoader::m_AsnTextData

private

Definition at line 85 of file rm_object_loader.hpp.

m_CurrentFileName [1/2]

wxString CAsnObjectLoader::m_CurrentFileName

private

Definition at line 101 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::Execute(), and CAsnObjectLoader::LoadFromStream().

m_CurrentFileName [2/2]

wxString CRMObjectLoader::m_CurrentFileName

private

Definition at line 87 of file rm_object_loader.hpp.

m_Dir

string CLBLASTObjectLoader::m_Dir

private

Definition at line 91 of file lblast_object_loader.hpp.

m_FileNames [1/2]

vector<wxString> CAsnObjectLoader::m_FileNames

private

Definition at line 94 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::Execute().

m_FileNames [2/2]

vector<wxString> CRMObjectLoader::m_FileNames

private

Definition at line 84 of file rm_object_loader.hpp.

Referenced by CRMObjectLoader::Execute().

m_Loader

CRef<objects::CLoaderDescriptor> CLBLASTObjectLoader::m_Loader

private

Definition at line 94 of file lblast_object_loader.hpp.

Referenced by CLBLASTObjectLoader::Execute(), and CLBLASTObjectLoader::GetLoader().

m_Objects [1/4]

TObjects CAsnObjectLoader::m_Objects

private

Final complete object list with description set.

Definition at line 97 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::Execute(), and CAsnObjectLoader::GetObjects().

m_Objects [2/4]

TObjects CLBLASTObjectLoader::m_Objects

private

Definition at line 92 of file lblast_object_loader.hpp.

Referenced by CLBLASTObjectLoader::Execute(), and CLBLASTObjectLoader::GetObjects().

m_Objects [3/4]

TObjects CRMObjectLoader::m_Objects

private

Definition at line 86 of file rm_object_loader.hpp.

Referenced by CRMObjectLoader::Execute(), and CRMObjectLoader::GetObjects().

m_Objects [4/4]

TObjects CTableObjectLoader::m_Objects

private

Definition at line 81 of file table_object_loader.hpp.

Referenced by CTableObjectLoader::CTableObjectLoader(), and CTableObjectLoader::GetObjects().

m_OrigObjects [1/2]

TConstScopedObjects CTableView::m_OrigObjects

protected

Definition at line 108 of file table_view.hpp.

Referenced by CTableView::GetMainObject(), CTableView::InitView(), and CTableView::x_GetOrigObject().

m_OrigObjects [2/2]

TOrigObjects CAsnObjectLoader::m_OrigObjects

private

Original object list for current file.

Definition at line 99 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::LoadFromStream(), and CAsnObjectLoader::x_OnTopObjectFound().

m_Params

CLBLASTLoadParams CLBLASTObjectLoader::m_Params

private

Definition at line 96 of file lblast_object_loader.hpp.

Referenced by CLBLASTObjectLoader::Execute().

m_Scope [1/3]

CRef<objects::CScope> CAsnObjectLoader::m_Scope

private

Definition at line 103 of file asn_object_loader.hpp.

Referenced by CAsnObjectLoader::Init(), and CAsnObjectLoader::LoadFromStream().

m_Scope [2/3]

CRef<objects::CScope> CLBLASTObjectLoader::m_Scope

private

Definition at line 93 of file lblast_object_loader.hpp.

m_Scope [3/3]

CRef<objects::CScope> CRMObjectLoader::m_Scope

private

Definition at line 89 of file rm_object_loader.hpp.

m_Window

wxWindow* CTableView::m_Window

protected

Definition at line 110 of file table_view.hpp.

Referenced by CTableView::CreateViewWindow(), CAlnSummaryView::CreateViewWindow(), CTableView::DestroyViewWindow(), CTableView::GetCommandHandler(), CTableView::GetMainObject(), CTableView::GetSelection(), CTableView::InitView(), CTableView::LoadSettings(), CTableView::OnProjectChanged(), CTableView::SaveSettings(), CTableView::SetRegistryPath(), and CTableView::x_OnSetSelection().

Friends

CSniffReader [1/2]

friend class CSniffReader

friend

Definition at line 66 of file asn_object_loader.hpp.

CSniffReader [2/2]

friend class CSniffReader

friend

Definition at line 61 of file rm_object_loader.hpp.

CTableViewFactory

friend class CTableViewFactory

friend

Definition at line 55 of file table_view.hpp.