NCBI C++ ToolKit
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Range Support
+ Collaboration diagram for Range Support:

Classes

class  CAlignRange< Position >
 CAlignRange Represents an element of pairwise alignment of two sequences. More...
 
struct  PAlignRangeToLess< TAlignRange >
 
struct  PAlignRangeFromLess< TAlignRange >
 
struct  SPositionTraitsBySignedness< Signed, Position >
 
struct  SPositionTraitsBySignedness< true, Position >
 
struct  SPositionTraitsBySignedness< false, Position >
 
struct  SPositionTraits< Position >
 
struct  SPositionTraits< float >
 
struct  SPositionTraits< double >
 
struct  SPositionTraits< long double >
 
class  COpenRange< Position >
 
class  CRange< Position >
 CRange –. More...
 
class  CRangeMapBase< Traits >
 
class  CRangeMapIterator< Traits >
 
class  CRangeMap< Mapped, Position >
 
class  CRangeMultimap< Mapped, Position >
 
class  CRangeMapTraitsBase< Position, Mapped >
 
class  CRangeMapTraits< Position, Mapped >
 
class  CRangeMultimapTraits< Position, Mapped >
 
class  CRangeMapIteratorTraits< MapTraits >
 
class  CRangeMapConstIteratorTraits< MapTraits >
 

Typedefs

typedef Position CAlignRange< Position >::position_type
 
typedef CAlignRange< Position > CAlignRange< Position >::TThisType
 
typedef CRange< Position > CAlignRange< Position >::TRange
 
typedef TAlignRange::position_type PAlignRangeToLess< TAlignRange >::position_type
 
typedef TAlignRange::position_type PAlignRangeFromLess< TAlignRange >::position_type
 
typedef Position COpenRange< Position >::position_type
 
typedef COpenRange< Position > COpenRange< Position >::TThisType
 
typedef COpenRange< Position > CRange< Position >::TParent
 
typedef TParent::position_type CRange< Position >::position_type
 
typedef CRange< Position > CRange< Position >::TThisType
 
typedef CRange< TSeqPosTSeqRange
 typedefs for sequence ranges More...
 
typedef CRange< TSignedSeqPosTSignedSeqRange
 
typedef Position CRangeMapTraitsBase< Position, Mapped >::position_type
 
typedef CRange< position_typeCRangeMapTraitsBase< Position, Mapped >::range_type
 
typedef Mapped CRangeMapTraitsBase< Position, Mapped >::mapped_type
 
typedef pair< const range_type, mapped_typeCRangeMapTraitsBase< Position, Mapped >::value_type
 
typedef CRangeMapTraitsBase< Position, Mapped > CRangeMapTraits< Position, Mapped >::TParent
 
typedef CRangeMap< Mapped, Position > CRangeMapTraits< Position, Mapped >::TRangeMap
 
typedef map< typename TParent::range_type, Mapped > CRangeMapTraits< Position, Mapped >::TLevelMap
 
typedef map< Position, TLevelMapCRangeMapTraits< Position, Mapped >::TSelectMap
 
typedef CRangeMapTraitsBase< Position, Mapped > CRangeMultimapTraits< Position, Mapped >::TParent
 
typedef CRangeMultimap< Mapped, Position > CRangeMultimapTraits< Position, Mapped >::TRangeMap
 
typedef multimap< typename TParent::range_type, Mapped > CRangeMultimapTraits< Position, Mapped >::TLevelMap
 
typedef map< Position, TLevelMapCRangeMultimapTraits< Position, Mapped >::TSelectMap
 
typedef MapTraits CRangeMapIteratorTraits< MapTraits >::TMapTraits
 
typedef CRangeMapIteratorTraits< TMapTraitsCRangeMapIteratorTraits< MapTraits >::TIteratorTraits
 
typedef CRangeMapIteratorTraits< TMapTraitsCRangeMapIteratorTraits< MapTraits >::TNCIteratorTraits
 
typedef TMapTraits::TRangeMap & CRangeMapIteratorTraits< MapTraits >::TRangeMapRef
 
typedef TMapTraits::TSelectMap & CRangeMapIteratorTraits< MapTraits >::TSelectMapRef
 
typedef TMapTraits::TLevelMapCRangeMapIteratorTraits< MapTraits >::TLevelMapRef
 
typedef TMapTraits::TSelectMap::iterator CRangeMapIteratorTraits< MapTraits >::TSelectIter
 
typedef TMapTraits::TLevelMap::iterator CRangeMapIteratorTraits< MapTraits >::TLevelIter
 
typedef TMapTraits::value_type & CRangeMapIteratorTraits< MapTraits >::reference
 
typedef TMapTraits::value_type * CRangeMapIteratorTraits< MapTraits >::pointer
 
typedef CRangeMapIterator< TIteratorTraitsCRangeMapIteratorTraits< MapTraits >::iterator
 
typedef CRangeMapIterator< TNCIteratorTraitsCRangeMapIteratorTraits< MapTraits >::non_const_iterator
 
typedef MapTraits CRangeMapConstIteratorTraits< MapTraits >::TMapTraits
 
typedef CRangeMapConstIteratorTraits< TMapTraitsCRangeMapConstIteratorTraits< MapTraits >::TIteratorTraits
 
typedef CRangeMapIteratorTraits< TMapTraitsCRangeMapConstIteratorTraits< MapTraits >::TNCIteratorTraits
 
typedef const TMapTraits::TRangeMap & CRangeMapConstIteratorTraits< MapTraits >::TRangeMapRef
 
typedef const TMapTraits::TSelectMap & CRangeMapConstIteratorTraits< MapTraits >::TSelectMapRef
 
typedef const TMapTraits::TLevelMapCRangeMapConstIteratorTraits< MapTraits >::TLevelMapRef
 
typedef TMapTraits::TSelectMap::const_iterator CRangeMapConstIteratorTraits< MapTraits >::TSelectIter
 
typedef TMapTraits::TLevelMap::const_iterator CRangeMapConstIteratorTraits< MapTraits >::TLevelIter
 
typedef const TMapTraits::value_type & CRangeMapConstIteratorTraits< MapTraits >::reference
 
typedef const TMapTraits::value_type * CRangeMapConstIteratorTraits< MapTraits >::pointer
 
typedef CRangeMapIterator< TIteratorTraitsCRangeMapConstIteratorTraits< MapTraits >::iterator
 
typedef CRangeMapIterator< TNCIteratorTraitsCRangeMapConstIteratorTraits< MapTraits >::non_const_iterator
 
typedef Traits CRangeMapIterator< Traits >::TTraits
 
typedef TTraits::position_type CRangeMapIterator< Traits >::position_type
 
typedef TTraits::range_type CRangeMapIterator< Traits >::range_type
 
typedef TTraits::mapped_type CRangeMapIterator< Traits >::mapped_type
 
typedef TTraits::value_type CRangeMapIterator< Traits >::value_type
 
typedef TTraits::reference CRangeMapIterator< Traits >::reference
 
typedef TTraits::pointer CRangeMapIterator< Traits >::pointer
 
typedef TTraits::TRangeMap CRangeMapIterator< Traits >::TRangeMap
 
typedef TTraits::TSelectMapRef CRangeMapIterator< Traits >::TSelectMapRef
 
typedef TTraits::TSelectIter CRangeMapIterator< Traits >::TSelectIter
 
typedef TTraits::TLevelIter CRangeMapIterator< Traits >::TLevelIter
 
typedef TTraits::iterator CRangeMapIterator< Traits >::TThisType
 
typedef Traits CRangeMapBase< Traits >::TRangeMapTraits
 
typedef CRangeMapIteratorTraits< TRangeMapTraitsCRangeMapBase< Traits >::TIteratorTraits
 
typedef CRangeMapConstIteratorTraits< TRangeMapTraitsCRangeMapBase< Traits >::TConstIteratorTraits
 
typedef size_t CRangeMapBase< Traits >::size_type
 
typedef TRangeMapTraits::position_type CRangeMapBase< Traits >::position_type
 
typedef TRangeMapTraits::range_type CRangeMapBase< Traits >::range_type
 
typedef TRangeMapTraits::mapped_type CRangeMapBase< Traits >::mapped_type
 
typedef TRangeMapTraits::value_type CRangeMapBase< Traits >::value_type
 
typedef range_type CRangeMapBase< Traits >::key_type
 
typedef TRangeMapTraits::TRangeMap CRangeMapBase< Traits >::TThisType
 
typedef TIteratorTraits::iterator CRangeMapBase< Traits >::iterator
 
typedef TConstIteratorTraits::iterator CRangeMapBase< Traits >::const_iterator
 
typedef TRangeMapTraits::TSelectMap CRangeMapBase< Traits >::TSelectMap
 
typedef TSelectMap::value_type CRangeMapBase< Traits >::select_value
 
typedef TSelectMap::iterator CRangeMapBase< Traits >::TSelectMapI
 
typedef TRangeMapTraits::TLevelMap CRangeMapBase< Traits >::TLevelMap
 
typedef TLevelMap::iterator CRangeMapBase< Traits >::TLevelMapI
 
typedef CRangeMapBase< CRangeMapTraits< Position, Mapped > > CRangeMap< Mapped, Position >::TParent
 
typedef TParent::size_type CRangeMap< Mapped, Position >::size_type
 
typedef TParent::position_type CRangeMap< Mapped, Position >::position_type
 
typedef TParent::range_type CRangeMap< Mapped, Position >::range_type
 
typedef TParent::mapped_type CRangeMap< Mapped, Position >::mapped_type
 
typedef TParent::value_type CRangeMap< Mapped, Position >::value_type
 
typedef TParent::key_type CRangeMap< Mapped, Position >::key_type
 
typedef TParent::iterator CRangeMap< Mapped, Position >::iterator
 
typedef TParent::const_iterator CRangeMap< Mapped, Position >::const_iterator
 
typedef TParent::TRangeMapTraits CRangeMap< Mapped, Position >::TRangeMapTraits
 
typedef TParent::TSelectMap CRangeMap< Mapped, Position >::TSelectMap
 
typedef TParent::select_value CRangeMap< Mapped, Position >::select_value
 
typedef TParent::TSelectMapI CRangeMap< Mapped, Position >::TSelectMapI
 
typedef TParent::TLevelMap CRangeMap< Mapped, Position >::TLevelMap
 
typedef TParent::TLevelMapI CRangeMap< Mapped, Position >::TLevelMapI
 
typedef CRangeMapBase< CRangeMultimapTraits< Position, Mapped > > CRangeMultimap< Mapped, Position >::TParent
 
typedef TParent::size_type CRangeMultimap< Mapped, Position >::size_type
 
typedef TParent::position_type CRangeMultimap< Mapped, Position >::position_type
 
typedef TParent::range_type CRangeMultimap< Mapped, Position >::range_type
 
typedef TParent::mapped_type CRangeMultimap< Mapped, Position >::mapped_type
 
typedef TParent::value_type CRangeMultimap< Mapped, Position >::value_type
 
typedef TParent::key_type CRangeMultimap< Mapped, Position >::key_type
 
typedef TParent::iterator CRangeMultimap< Mapped, Position >::iterator
 
typedef TParent::const_iterator CRangeMultimap< Mapped, Position >::const_iterator
 
typedef TParent::TRangeMapTraits CRangeMultimap< Mapped, Position >::TRangeMapTraits
 
typedef TParent::TSelectMap CRangeMultimap< Mapped, Position >::TSelectMap
 
typedef TParent::select_value CRangeMultimap< Mapped, Position >::select_value
 
typedef TParent::TSelectMapI CRangeMultimap< Mapped, Position >::TSelectMapI
 
typedef TParent::TLevelMap CRangeMultimap< Mapped, Position >::TLevelMap
 
typedef TParent::TLevelMapI CRangeMultimap< Mapped, Position >::TLevelMapI
 

Enumerations

enum  CAlignRange< Position >::EFlags { CAlignRange< Position >::fReversed = 0x01 , CAlignRange< Position >::fFirstRev = 0x02 }
 

Functions

 CAlignRange< Position >::CAlignRange (void)
 
 CAlignRange< Position >::CAlignRange (position_type first_from, position_type second_from, position_type len, bool direct=true, bool first_direct=true)
 
bool CAlignRange< Position >::IsDirect () const
 
bool CAlignRange< Position >::IsReversed () const
 
bool CAlignRange< Position >::IsFirstDirect () const
 
bool CAlignRange< Position >::IsFirstReversed () const
 
position_type CAlignRange< Position >::GetFirstFrom (void) const
 
position_type CAlignRange< Position >::GetFirstToOpen (void) const
 
position_type CAlignRange< Position >::GetFirstTo (void) const
 
position_type CAlignRange< Position >::GetSecondFrom (void) const
 
position_type CAlignRange< Position >::GetSecondToOpen (void) const
 
position_type CAlignRange< Position >::GetSecondTo (void) const
 
TRange CAlignRange< Position >::GetFirstRange () const
 
TRange CAlignRange< Position >::GetSecondRange () const
 
bool CAlignRange< Position >::Empty (void) const
 
bool CAlignRange< Position >::NotEmpty (void) const
 
position_type CAlignRange< Position >::GetLength (void) const
 
TThisTypeCAlignRange< Position >::SetFirstFrom (position_type from)
 
TThisTypeCAlignRange< Position >::SetSecondFrom (position_type second_from)
 
TThisTypeCAlignRange< Position >::SetLength (position_type len)
 
TThisTypeCAlignRange< Position >::Set (position_type first_from, position_type second_from, position_type len)
 
void CAlignRange< Position >::SetDirect (bool direct=true)
 
void CAlignRange< Position >::SetReversed (bool reversed=true)
 
void CAlignRange< Position >::SetFirstDirect (bool direct=true)
 
void CAlignRange< Position >::SetFirstReversed (bool reversed=true)
 
bool CAlignRange< Position >::operator== (const TThisType &r) const
 
bool CAlignRange< Position >::operator!= (const TThisType &r) const
 
position_type CAlignRange< Position >::GetSecondPosByFirstPos (position_type pos) const
 
position_type CAlignRange< Position >::GetFirstPosBySecondPos (position_type pos) const
 
bool CAlignRange< Position >::FirstContains (position_type pos) const
 
bool CAlignRange< Position >::SecondContains (position_type pos) const
 
TThisType CAlignRange< Position >::IntersectionWith (const CRange< position_type > &r) const
 Intersection. More...
 
TThisTypeCAlignRange< Position >::IntersectWith (const CRange< position_type > &r)
 
TThisTypeCAlignRange< Position >::IntersectSecondWith (const CRange< position_type > &r)
 
bool CAlignRange< Position >::IntersectingWith (const CRange< position_type > &r) const
 
bool CAlignRange< Position >::IsAbutting (const TThisType &r) const
 
TThisTypeCAlignRange< Position >::CombineWithAbutting (const TThisType &r)
 
TThisType CAlignRange< Position >::CombinationWithAbutting (const TThisType &r) const
 
static position_type CAlignRange< Position >::GetEmptyFrom (void)
 
static position_type CAlignRange< Position >::GetEmptyToOpen (void)
 
static position_type CAlignRange< Position >::GetEmptyTo (void)
 
static position_type CAlignRange< Position >::GetEmptyLength (void)
 
static TThisType CAlignRange< Position >::GetEmpty (void)
 
static position_type CAlignRange< Position >::GetPositionMin (void)
 
static position_type CAlignRange< Position >::GetPositionMax (void)
 
bool PAlignRangeToLess< TAlignRange >::operator() (const TAlignRange &r, position_type pos)
 
bool PAlignRangeToLess< TAlignRange >::operator() (position_type pos, const TAlignRange &r)
 
bool PAlignRangeToLess< TAlignRange >::operator() (const TAlignRange &r1, const TAlignRange &r2)
 
bool PAlignRangeToLess< TAlignRange >::operator() (const TAlignRange *r, position_type pos)
 
bool PAlignRangeToLess< TAlignRange >::operator() (position_type pos, const TAlignRange *r)
 
bool PAlignRangeToLess< TAlignRange >::operator() (const TAlignRange *r1, const TAlignRange *r2)
 
bool PAlignRangeFromLess< TAlignRange >::operator() (const TAlignRange &r, position_type pos)
 
bool PAlignRangeFromLess< TAlignRange >::operator() (position_type pos, const TAlignRange &r)
 
bool PAlignRangeFromLess< TAlignRange >::operator() (const TAlignRange &r_1, const TAlignRange &r_2)
 
static bool SPositionTraitsBySignedness< true, Position >::IsNegative (Position pos)
 
static bool SPositionTraitsBySignedness< false, Position >::IsNegative (Position)
 
 COpenRange< Position >::COpenRange (void)
 
 COpenRange< Position >::COpenRange (position_type from, position_type toOpen)
 
position_type COpenRange< Position >::GetFrom (void) const
 
position_type COpenRange< Position >::GetToOpen (void) const
 
position_type COpenRange< Position >::GetTo (void) const
 
bool COpenRange< Position >::Empty (void) const
 
bool COpenRange< Position >::NotEmpty (void) const
 
position_type COpenRange< Position >::GetLength (void) const
 
TThisTypeCOpenRange< Position >::SetFrom (position_type from)
 
TThisTypeCOpenRange< Position >::SetToOpen (position_type toOpen)
 
TThisTypeCOpenRange< Position >::SetTo (position_type to)
 
TThisTypeCOpenRange< Position >::SetOpen (position_type from, position_type toOpen)
 
TThisTypeCOpenRange< Position >::Set (position_type from, position_type to)
 
TThisTypeCOpenRange< Position >::SetLength (position_type length)
 
TThisTypeCOpenRange< Position >::SetLengthDown (position_type length)
 
bool COpenRange< Position >::operator== (const TThisType &r) const
 
bool COpenRange< Position >::operator!= (const TThisType &r) const
 
bool COpenRange< Position >::operator< (const TThisType &r) const
 
bool COpenRange< Position >::operator<= (const TThisType &r) const
 
bool COpenRange< Position >::operator> (const TThisType &r) const
 
bool COpenRange< Position >::operator>= (const TThisType &r) const
 
static position_type COpenRange< Position >::GetPositionMin (void)
 
static position_type COpenRange< Position >::GetPositionMax (void)
 
static position_type COpenRange< Position >::GetWholeFrom (void)
 
static position_type COpenRange< Position >::GetWholeToOpen (void)
 
static position_type COpenRange< Position >::GetWholeTo (void)
 
static position_type COpenRange< Position >::GetWholeLength (void)
 
static TThisType COpenRange< Position >::GetWhole (void)
 
bool COpenRange< Position >::IsWholeFrom (void) const
 
bool COpenRange< Position >::IsWholeTo (void) const
 
bool COpenRange< Position >::IsWhole (void) const
 
static position_type COpenRange< Position >::GetEmptyFrom (void)
 
static position_type COpenRange< Position >::GetEmptyToOpen (void)
 
static position_type COpenRange< Position >::GetEmptyTo (void)
 
static position_type COpenRange< Position >::GetEmptyLength (void)
 
static TThisType COpenRange< Position >::GetEmpty (void)
 
TThisType COpenRange< Position >::IntersectionWith (const TThisType &r) const
 
TThisTypeCOpenRange< Position >::IntersectWith (const TThisType &r)
 
TThisType COpenRange< Position >::operator& (const TThisType &r) const
 
TThisTypeCOpenRange< Position >::operator&= (const TThisType &r)
 
bool COpenRange< Position >::IntersectingWith (const TThisType &r) const
 
bool COpenRange< Position >::AbuttingWith (const TThisType &r) const
 
TThisTypeCOpenRange< Position >::CombineWith (const TThisType &r)
 
TThisType COpenRange< Position >::CombinationWith (const TThisType &r) const
 
TThisTypeCOpenRange< Position >::operator+= (const TThisType &r)
 
TThisType COpenRange< Position >::operator+ (const TThisType &r) const
 
 CRange< Position >::CRange (void)
 
 CRange< Position >::CRange (position_type from, position_type to)
 
 CRange< Position >::CRange (const TParent &range)
 
TThisTypeCRange< Position >::operator= (const TParent &range)
 
template<class Position >
CNcbiOstreamoperator<< (CNcbiOstream &out, const COpenRange< Position > &range)
 
static position_type CRangeMapTraitsBase< Position, Mapped >::get_max_length (const range_type &key)
 
 CRangeMapIterator< Traits >::CRangeMapIterator (void)
 
 CRangeMapIterator< Traits >::CRangeMapIterator (const typename TTraits::non_const_iterator &iter)
 
const range_typeCRangeMapIterator< Traits >::GetRange (void) const
 
TSelectIter CRangeMapIterator< Traits >::GetSelectIter (void) const
 
TSelectIter CRangeMapIterator< Traits >::GetSelectIterEnd (void) const
 
TLevelIter CRangeMapIterator< Traits >::GetLevelIter (void) const
 
TLevelIter CRangeMapIterator< Traits >::GetLevelIterEnd (void) const
 
bool CRangeMapIterator< Traits >::Valid (void) const
 
 CRangeMapIterator< Traits >::DECLARE_OPERATOR_BOOL (Valid())
 
bool CRangeMapIterator< Traits >::operator== (const TThisType &iter) const
 
bool CRangeMapIterator< Traits >::operator!= (const TThisType &iter) const
 
range_type CRangeMapIterator< Traits >::GetInterval (void) const
 
reference CRangeMapIterator< Traits >::operator* (void) const
 
pointer CRangeMapIterator< Traits >::operator-> (void) const
 
bool CRangeMapIterator< Traits >::SetLevelIter (TLevelIter levelIter)
 
TLevelIter CRangeMapIterator< Traits >::FirstLevelIter (void)
 
void CRangeMapIterator< Traits >::SetEnd (TSelectMapRef selectMap)
 
void CRangeMapIterator< Traits >::SetBegin (TSelectMapRef selectMap)
 
void CRangeMapIterator< Traits >::SetBegin (const range_type &range, TSelectMapRef selectMap)
 
void CRangeMapIterator< Traits >::Find (const range_type &key, TSelectMapRef selectMap)
 
TThisTypeCRangeMapIterator< Traits >::operator++ (void)
 
 CRangeMapBase< Traits >::CRangeMapBase (void)
 
TSelectMapI CRangeMapBase< Traits >::insertLevel (position_type key)
 
bool CRangeMapBase< Traits >::empty (void) const
 
size_type CRangeMapBase< Traits >::size (void) const
 
const_iterator CRangeMapBase< Traits >::end (void) const
 
const_iterator CRangeMapBase< Traits >::begin (void) const
 
const_iterator CRangeMapBase< Traits >::begin (const range_type &range) const
 
iterator CRangeMapBase< Traits >::end (void)
 
iterator CRangeMapBase< Traits >::begin (void)
 
iterator CRangeMapBase< Traits >::begin (const range_type &range)
 
const_iterator CRangeMapBase< Traits >::find (const key_type &key) const
 
iterator CRangeMapBase< Traits >::find (const key_type &key)
 
void CRangeMapBase< Traits >::erase (iterator iter)
 
size_type CRangeMapBase< Traits >::erase (const key_type &key)
 
void CRangeMapBase< Traits >::clear (void)
 
void CRangeMapBase< Traits >::swap (TThisType &rangeMap)
 
 CRangeMap< Mapped, Position >::CRangeMap (void)
 
pair< iterator, boolCRangeMap< Mapped, Position >::insert (const value_type &value)
 
mapped_typeCRangeMap< Mapped, Position >::operator[] (const key_type &key)
 
 CRangeMultimap< Mapped, Position >::CRangeMultimap (void)
 
iterator CRangeMultimap< Mapped, Position >::insert (const value_type &value)
 

Variables

position_type CAlignRange< Position >::m_FirstFrom
 
position_type CAlignRange< Position >::m_SecondFrom
 start More...
 
position_type CAlignRange< Position >::m_Length
 start on the aligned sequence More...
 
int CAlignRange< Position >::m_Flags
 length of the segment More...
 
position_type COpenRange< Position >::m_From
 
position_type COpenRange< Position >::m_ToOpen
 
range_type CRangeMapIterator< Traits >::m_Range
 
TSelectIter CRangeMapIterator< Traits >::m_SelectIter
 
TSelectIter CRangeMapIterator< Traits >::m_SelectIterEnd
 
TLevelIter CRangeMapIterator< Traits >::m_LevelIter
 
TSelectMap CRangeMapBase< Traits >::m_SelectMap
 

Friends

class CRangeMapIterator< Traits >::CRangeMapBase< typename TTraits::TMapTraits >
 
class CRangeMapIterator< Traits >::CRangeMap< mapped_type, position_type >
 
class CRangeMapIterator< Traits >::CRangeMultimap< mapped_type, position_type >
 

Detailed Description

Typedef Documentation

◆ const_iterator [1/3]

template<class Traits >
typedef TConstIteratorTraits::iterator CRangeMapBase< Traits >::const_iterator

Definition at line 399 of file rangemap.hpp.

◆ const_iterator [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::const_iterator CRangeMap< Mapped, Position >::const_iterator

Definition at line 553 of file rangemap.hpp.

◆ const_iterator [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::const_iterator CRangeMultimap< Mapped, Position >::const_iterator

Definition at line 615 of file rangemap.hpp.

◆ iterator [1/5]

template<typename MapTraits >
typedef CRangeMapIterator<TIteratorTraits> CRangeMapIteratorTraits< MapTraits >::iterator

Definition at line 144 of file rangemap.hpp.

◆ iterator [2/5]

template<typename MapTraits >
typedef CRangeMapIterator<TIteratorTraits> CRangeMapConstIteratorTraits< MapTraits >::iterator

Definition at line 164 of file rangemap.hpp.

◆ iterator [3/5]

template<class Traits >
typedef TIteratorTraits::iterator CRangeMapBase< Traits >::iterator

Definition at line 398 of file rangemap.hpp.

◆ iterator [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::iterator CRangeMap< Mapped, Position >::iterator

Definition at line 552 of file rangemap.hpp.

◆ iterator [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::iterator CRangeMultimap< Mapped, Position >::iterator

Definition at line 614 of file rangemap.hpp.

◆ key_type [1/3]

template<class Traits >
typedef range_type CRangeMapBase< Traits >::key_type

Definition at line 395 of file rangemap.hpp.

◆ key_type [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::key_type CRangeMap< Mapped, Position >::key_type

Definition at line 550 of file rangemap.hpp.

◆ key_type [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::key_type CRangeMultimap< Mapped, Position >::key_type

Definition at line 612 of file rangemap.hpp.

◆ mapped_type [1/5]

template<typename Position , typename Mapped >
typedef Mapped CRangeMapTraitsBase< Position, Mapped >::mapped_type

Definition at line 65 of file rangemap.hpp.

◆ mapped_type [2/5]

template<class Traits >
typedef TTraits::mapped_type CRangeMapIterator< Traits >::mapped_type

Definition at line 177 of file rangemap.hpp.

◆ mapped_type [3/5]

template<class Traits >
typedef TRangeMapTraits::mapped_type CRangeMapBase< Traits >::mapped_type

Definition at line 393 of file rangemap.hpp.

◆ mapped_type [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::mapped_type CRangeMap< Mapped, Position >::mapped_type

Definition at line 548 of file rangemap.hpp.

◆ mapped_type [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::mapped_type CRangeMultimap< Mapped, Position >::mapped_type

Definition at line 610 of file rangemap.hpp.

◆ non_const_iterator [1/2]

template<typename MapTraits >
typedef CRangeMapIterator<TNCIteratorTraits> CRangeMapIteratorTraits< MapTraits >::non_const_iterator

Definition at line 145 of file rangemap.hpp.

◆ non_const_iterator [2/2]

template<typename MapTraits >
typedef CRangeMapIterator<TNCIteratorTraits> CRangeMapConstIteratorTraits< MapTraits >::non_const_iterator

Definition at line 165 of file rangemap.hpp.

◆ pointer [1/3]

template<typename MapTraits >
typedef TMapTraits::value_type* CRangeMapIteratorTraits< MapTraits >::pointer

Definition at line 142 of file rangemap.hpp.

◆ pointer [2/3]

template<typename MapTraits >
typedef const TMapTraits::value_type* CRangeMapConstIteratorTraits< MapTraits >::pointer

Definition at line 162 of file rangemap.hpp.

◆ pointer [3/3]

template<class Traits >
typedef TTraits::pointer CRangeMapIterator< Traits >::pointer

Definition at line 181 of file rangemap.hpp.

◆ position_type [1/10]

template<class Position >
typedef Position CAlignRange< Position >::position_type

Definition at line 65 of file align_range.hpp.

◆ position_type [2/10]

template<class TAlignRange >
typedef TAlignRange::position_type PAlignRangeToLess< TAlignRange >::position_type

Definition at line 51 of file align_range_oper.hpp.

◆ position_type [3/10]

template<class TAlignRange >
typedef TAlignRange::position_type PAlignRangeFromLess< TAlignRange >::position_type

Definition at line 82 of file align_range_oper.hpp.

◆ position_type [4/10]

template<class Position >
typedef Position COpenRange< Position >::position_type

Definition at line 120 of file range.hpp.

◆ position_type [5/10]

template<class Position >
typedef TParent::position_type CRange< Position >::position_type

Definition at line 391 of file range.hpp.

◆ position_type [6/10]

template<typename Position , typename Mapped >
typedef Position CRangeMapTraitsBase< Position, Mapped >::position_type

Definition at line 63 of file rangemap.hpp.

◆ position_type [7/10]

template<class Traits >
typedef TTraits::position_type CRangeMapIterator< Traits >::position_type

Definition at line 175 of file rangemap.hpp.

◆ position_type [8/10]

template<class Traits >
typedef TRangeMapTraits::position_type CRangeMapBase< Traits >::position_type

Definition at line 391 of file rangemap.hpp.

◆ position_type [9/10]

template<typename Mapped , typename Position = int>
typedef TParent::position_type CRangeMap< Mapped, Position >::position_type

Definition at line 546 of file rangemap.hpp.

◆ position_type [10/10]

template<typename Mapped , typename Position = int>
typedef TParent::position_type CRangeMultimap< Mapped, Position >::position_type

Definition at line 608 of file rangemap.hpp.

◆ range_type [1/5]

template<typename Position , typename Mapped >
typedef CRange<position_type> CRangeMapTraitsBase< Position, Mapped >::range_type

Definition at line 64 of file rangemap.hpp.

◆ range_type [2/5]

template<class Traits >
typedef TTraits::range_type CRangeMapIterator< Traits >::range_type

Definition at line 176 of file rangemap.hpp.

◆ range_type [3/5]

template<class Traits >
typedef TRangeMapTraits::range_type CRangeMapBase< Traits >::range_type

Definition at line 392 of file rangemap.hpp.

◆ range_type [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::range_type CRangeMap< Mapped, Position >::range_type

Definition at line 547 of file rangemap.hpp.

◆ range_type [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::range_type CRangeMultimap< Mapped, Position >::range_type

Definition at line 609 of file rangemap.hpp.

◆ reference [1/3]

template<typename MapTraits >
typedef TMapTraits::value_type& CRangeMapIteratorTraits< MapTraits >::reference

Definition at line 141 of file rangemap.hpp.

◆ reference [2/3]

template<typename MapTraits >
typedef const TMapTraits::value_type& CRangeMapConstIteratorTraits< MapTraits >::reference

Definition at line 161 of file rangemap.hpp.

◆ reference [3/3]

template<class Traits >
typedef TTraits::reference CRangeMapIterator< Traits >::reference

Definition at line 180 of file rangemap.hpp.

◆ select_value [1/3]

template<class Traits >
typedef TSelectMap::value_type CRangeMapBase< Traits >::select_value
protected

Definition at line 404 of file rangemap.hpp.

◆ select_value [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::select_value CRangeMap< Mapped, Position >::select_value

Definition at line 557 of file rangemap.hpp.

◆ select_value [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::select_value CRangeMultimap< Mapped, Position >::select_value

Definition at line 619 of file rangemap.hpp.

◆ size_type [1/3]

template<class Traits >
typedef size_t CRangeMapBase< Traits >::size_type

Definition at line 390 of file rangemap.hpp.

◆ size_type [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::size_type CRangeMap< Mapped, Position >::size_type

Definition at line 545 of file rangemap.hpp.

◆ size_type [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::size_type CRangeMultimap< Mapped, Position >::size_type

Definition at line 607 of file rangemap.hpp.

◆ TConstIteratorTraits

Definition at line 388 of file rangemap.hpp.

◆ TIteratorTraits [1/3]

template<typename MapTraits >
typedef CRangeMapIteratorTraits<TMapTraits> CRangeMapIteratorTraits< MapTraits >::TIteratorTraits

Definition at line 133 of file rangemap.hpp.

◆ TIteratorTraits [2/3]

template<typename MapTraits >
typedef CRangeMapConstIteratorTraits<TMapTraits> CRangeMapConstIteratorTraits< MapTraits >::TIteratorTraits

Definition at line 153 of file rangemap.hpp.

◆ TIteratorTraits [3/3]

template<class Traits >
typedef CRangeMapIteratorTraits<TRangeMapTraits> CRangeMapBase< Traits >::TIteratorTraits

Definition at line 387 of file rangemap.hpp.

◆ TLevelIter [1/3]

template<typename MapTraits >
typedef TMapTraits::TLevelMap::iterator CRangeMapIteratorTraits< MapTraits >::TLevelIter

Definition at line 140 of file rangemap.hpp.

◆ TLevelIter [2/3]

template<typename MapTraits >
typedef TMapTraits::TLevelMap::const_iterator CRangeMapConstIteratorTraits< MapTraits >::TLevelIter

Definition at line 160 of file rangemap.hpp.

◆ TLevelIter [3/3]

template<class Traits >
typedef TTraits::TLevelIter CRangeMapIterator< Traits >::TLevelIter

Definition at line 186 of file rangemap.hpp.

◆ TLevelMap [1/5]

template<typename Position , typename Mapped >
typedef map<typename TParent::range_type, Mapped> CRangeMapTraits< Position, Mapped >::TLevelMap

Definition at line 113 of file rangemap.hpp.

◆ TLevelMap [2/5]

template<typename Position , typename Mapped >
typedef multimap<typename TParent::range_type, Mapped> CRangeMultimapTraits< Position, Mapped >::TLevelMap

Definition at line 123 of file rangemap.hpp.

◆ TLevelMap [3/5]

template<class Traits >
typedef TRangeMapTraits::TLevelMap CRangeMapBase< Traits >::TLevelMap
protected

Definition at line 406 of file rangemap.hpp.

◆ TLevelMap [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::TLevelMap CRangeMap< Mapped, Position >::TLevelMap

Definition at line 559 of file rangemap.hpp.

◆ TLevelMap [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::TLevelMap CRangeMultimap< Mapped, Position >::TLevelMap

Definition at line 621 of file rangemap.hpp.

◆ TLevelMapI [1/3]

template<class Traits >
typedef TLevelMap::iterator CRangeMapBase< Traits >::TLevelMapI
protected

Definition at line 407 of file rangemap.hpp.

◆ TLevelMapI [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::TLevelMapI CRangeMap< Mapped, Position >::TLevelMapI

Definition at line 560 of file rangemap.hpp.

◆ TLevelMapI [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::TLevelMapI CRangeMultimap< Mapped, Position >::TLevelMapI

Definition at line 622 of file rangemap.hpp.

◆ TLevelMapRef [1/2]

template<typename MapTraits >
typedef TMapTraits::TLevelMap& CRangeMapIteratorTraits< MapTraits >::TLevelMapRef

Definition at line 138 of file rangemap.hpp.

◆ TLevelMapRef [2/2]

template<typename MapTraits >
typedef const TMapTraits::TLevelMap& CRangeMapConstIteratorTraits< MapTraits >::TLevelMapRef

Definition at line 158 of file rangemap.hpp.

◆ TMapTraits [1/2]

template<typename MapTraits >
typedef MapTraits CRangeMapIteratorTraits< MapTraits >::TMapTraits

Definition at line 132 of file rangemap.hpp.

◆ TMapTraits [2/2]

template<typename MapTraits >
typedef MapTraits CRangeMapConstIteratorTraits< MapTraits >::TMapTraits

Definition at line 152 of file rangemap.hpp.

◆ TNCIteratorTraits [1/2]

template<typename MapTraits >
typedef CRangeMapIteratorTraits<TMapTraits> CRangeMapIteratorTraits< MapTraits >::TNCIteratorTraits

Definition at line 134 of file rangemap.hpp.

◆ TNCIteratorTraits [2/2]

template<typename MapTraits >
typedef CRangeMapIteratorTraits<TMapTraits> CRangeMapConstIteratorTraits< MapTraits >::TNCIteratorTraits

Definition at line 154 of file rangemap.hpp.

◆ TParent [1/5]

template<class Position >
typedef COpenRange<Position> CRange< Position >::TParent

Definition at line 390 of file range.hpp.

◆ TParent [2/5]

template<typename Position , typename Mapped >
typedef CRangeMapTraitsBase<Position, Mapped> CRangeMapTraits< Position, Mapped >::TParent
private

Definition at line 110 of file rangemap.hpp.

◆ TParent [3/5]

template<typename Position , typename Mapped >
typedef CRangeMapTraitsBase<Position, Mapped> CRangeMultimapTraits< Position, Mapped >::TParent
private

Definition at line 120 of file rangemap.hpp.

◆ TParent [4/5]

template<typename Mapped , typename Position = int>
typedef CRangeMapBase< CRangeMapTraits<Position, Mapped> > CRangeMap< Mapped, Position >::TParent
private

Definition at line 542 of file rangemap.hpp.

◆ TParent [5/5]

template<typename Mapped , typename Position = int>
typedef CRangeMapBase< CRangeMultimapTraits<Position, Mapped> > CRangeMultimap< Mapped, Position >::TParent
private

Definition at line 604 of file rangemap.hpp.

◆ TRange

template<class Position >
typedef CRange<Position> CAlignRange< Position >::TRange

Definition at line 67 of file align_range.hpp.

◆ TRangeMap [1/3]

template<typename Position , typename Mapped >
typedef CRangeMap<Mapped, Position> CRangeMapTraits< Position, Mapped >::TRangeMap

Definition at line 112 of file rangemap.hpp.

◆ TRangeMap [2/3]

template<typename Position , typename Mapped >
typedef CRangeMultimap<Mapped, Position> CRangeMultimapTraits< Position, Mapped >::TRangeMap

Definition at line 122 of file rangemap.hpp.

◆ TRangeMap [3/3]

template<class Traits >
typedef TTraits::TRangeMap CRangeMapIterator< Traits >::TRangeMap

Definition at line 183 of file rangemap.hpp.

◆ TRangeMapRef [1/2]

template<typename MapTraits >
typedef TMapTraits::TRangeMap& CRangeMapIteratorTraits< MapTraits >::TRangeMapRef

Definition at line 136 of file rangemap.hpp.

◆ TRangeMapRef [2/2]

template<typename MapTraits >
typedef const TMapTraits::TRangeMap& CRangeMapConstIteratorTraits< MapTraits >::TRangeMapRef

Definition at line 156 of file rangemap.hpp.

◆ TRangeMapTraits [1/3]

template<class Traits >
typedef Traits CRangeMapBase< Traits >::TRangeMapTraits

Definition at line 386 of file rangemap.hpp.

◆ TRangeMapTraits [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::TRangeMapTraits CRangeMap< Mapped, Position >::TRangeMapTraits

Definition at line 555 of file rangemap.hpp.

◆ TRangeMapTraits [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::TRangeMapTraits CRangeMultimap< Mapped, Position >::TRangeMapTraits

Definition at line 617 of file rangemap.hpp.

◆ TSelectIter [1/3]

template<typename MapTraits >
typedef TMapTraits::TSelectMap::iterator CRangeMapIteratorTraits< MapTraits >::TSelectIter

Definition at line 139 of file rangemap.hpp.

◆ TSelectIter [2/3]

template<typename MapTraits >
typedef TMapTraits::TSelectMap::const_iterator CRangeMapConstIteratorTraits< MapTraits >::TSelectIter

Definition at line 159 of file rangemap.hpp.

◆ TSelectIter [3/3]

template<class Traits >
typedef TTraits::TSelectIter CRangeMapIterator< Traits >::TSelectIter

Definition at line 185 of file rangemap.hpp.

◆ TSelectMap [1/5]

template<typename Position , typename Mapped >
typedef map<Position, TLevelMap> CRangeMapTraits< Position, Mapped >::TSelectMap

Definition at line 114 of file rangemap.hpp.

◆ TSelectMap [2/5]

template<typename Position , typename Mapped >
typedef map<Position, TLevelMap> CRangeMultimapTraits< Position, Mapped >::TSelectMap

Definition at line 124 of file rangemap.hpp.

◆ TSelectMap [3/5]

template<class Traits >
typedef TRangeMapTraits::TSelectMap CRangeMapBase< Traits >::TSelectMap
protected

Definition at line 403 of file rangemap.hpp.

◆ TSelectMap [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::TSelectMap CRangeMap< Mapped, Position >::TSelectMap

Definition at line 556 of file rangemap.hpp.

◆ TSelectMap [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::TSelectMap CRangeMultimap< Mapped, Position >::TSelectMap

Definition at line 618 of file rangemap.hpp.

◆ TSelectMapI [1/3]

template<class Traits >
typedef TSelectMap::iterator CRangeMapBase< Traits >::TSelectMapI
protected

Definition at line 405 of file rangemap.hpp.

◆ TSelectMapI [2/3]

template<typename Mapped , typename Position = int>
typedef TParent::TSelectMapI CRangeMap< Mapped, Position >::TSelectMapI

Definition at line 558 of file rangemap.hpp.

◆ TSelectMapI [3/3]

template<typename Mapped , typename Position = int>
typedef TParent::TSelectMapI CRangeMultimap< Mapped, Position >::TSelectMapI

Definition at line 620 of file rangemap.hpp.

◆ TSelectMapRef [1/3]

template<typename MapTraits >
typedef TMapTraits::TSelectMap& CRangeMapIteratorTraits< MapTraits >::TSelectMapRef

Definition at line 137 of file rangemap.hpp.

◆ TSelectMapRef [2/3]

template<typename MapTraits >
typedef const TMapTraits::TSelectMap& CRangeMapConstIteratorTraits< MapTraits >::TSelectMapRef

Definition at line 157 of file rangemap.hpp.

◆ TSelectMapRef [3/3]

template<class Traits >
typedef TTraits::TSelectMapRef CRangeMapIterator< Traits >::TSelectMapRef

Definition at line 184 of file rangemap.hpp.

◆ TSeqRange

typedefs for sequence ranges

Definition at line 419 of file range.hpp.

◆ TSignedSeqRange

Definition at line 420 of file range.hpp.

◆ TThisType [1/5]

template<class Position >
typedef CAlignRange<Position> CAlignRange< Position >::TThisType

Definition at line 66 of file align_range.hpp.

◆ TThisType [2/5]

template<class Position >
typedef COpenRange<Position> COpenRange< Position >::TThisType

Definition at line 121 of file range.hpp.

◆ TThisType [3/5]

template<class Position >
typedef CRange<Position> CRange< Position >::TThisType

Definition at line 392 of file range.hpp.

◆ TThisType [4/5]

template<class Traits >
typedef TTraits::iterator CRangeMapIterator< Traits >::TThisType

Definition at line 189 of file rangemap.hpp.

◆ TThisType [5/5]

template<class Traits >
typedef TRangeMapTraits::TRangeMap CRangeMapBase< Traits >::TThisType

Definition at line 397 of file rangemap.hpp.

◆ TTraits

template<class Traits >
typedef Traits CRangeMapIterator< Traits >::TTraits

Definition at line 174 of file rangemap.hpp.

◆ value_type [1/5]

template<typename Position , typename Mapped >
typedef pair<const range_type, mapped_type> CRangeMapTraitsBase< Position, Mapped >::value_type

Definition at line 66 of file rangemap.hpp.

◆ value_type [2/5]

template<class Traits >
typedef TTraits::value_type CRangeMapIterator< Traits >::value_type

Definition at line 178 of file rangemap.hpp.

◆ value_type [3/5]

template<class Traits >
typedef TRangeMapTraits::value_type CRangeMapBase< Traits >::value_type

Definition at line 394 of file rangemap.hpp.

◆ value_type [4/5]

template<typename Mapped , typename Position = int>
typedef TParent::value_type CRangeMap< Mapped, Position >::value_type

Definition at line 549 of file rangemap.hpp.

◆ value_type [5/5]

template<typename Mapped , typename Position = int>
typedef TParent::value_type CRangeMultimap< Mapped, Position >::value_type

Definition at line 611 of file rangemap.hpp.

Enumeration Type Documentation

◆ EFlags

template<class Position >
enum CAlignRange::EFlags
Enumerator
fReversed 
fFirstRev 

Definition at line 69 of file align_range.hpp.

Function Documentation

◆ AbuttingWith()

template<class Position >
bool COpenRange< Position >::AbuttingWith ( const TThisType r) const
inline

◆ begin() [1/4]

template<class Traits >
iterator CRangeMapBase< Traits >::begin ( const range_type range)
inline

Definition at line 476 of file rangemap.hpp.

◆ begin() [2/4]

template<class Traits >
const_iterator CRangeMapBase< Traits >::begin ( const range_type range) const
inline

Definition at line 457 of file rangemap.hpp.

◆ begin() [3/4]

template<class Traits >
iterator CRangeMapBase< Traits >::begin ( void  )
inline

Definition at line 470 of file rangemap.hpp.

◆ begin() [4/4]

template<class Traits >
const_iterator CRangeMapBase< Traits >::begin ( void  ) const
inline

◆ CAlignRange() [1/2]

template<class Position >
CAlignRange< Position >::CAlignRange ( position_type  first_from,
position_type  second_from,
position_type  len,
bool  direct = true,
bool  first_direct = true 
)
inline

◆ CAlignRange() [2/2]

template<class Position >
CAlignRange< Position >::CAlignRange ( void  )
inline

Definition at line 74 of file align_range.hpp.

◆ clear()

template<class Traits >
void CRangeMapBase< Traits >::clear ( void  )
inline

Definition at line 524 of file rangemap.hpp.

◆ CombinationWith()

template<class Position >
TThisType COpenRange< Position >::CombinationWith ( const TThisType r) const
inline

◆ CombinationWithAbutting()

template<class Position >
TThisType CAlignRange< Position >::CombinationWithAbutting ( const TThisType r) const
inline

Definition at line 319 of file align_range.hpp.

References CAlignRange< Position >::CombineWithAbutting(), and r().

◆ CombineWith()

template<class Position >
TThisType& COpenRange< Position >::CombineWith ( const TThisType r)
inline

◆ CombineWithAbutting()

template<class Position >
TThisType& CAlignRange< Position >::CombineWithAbutting ( const TThisType r)
inline

◆ COpenRange() [1/2]

template<class Position >
COpenRange< Position >::COpenRange ( position_type  from,
position_type  toOpen 
)
inline

Definition at line 128 of file range.hpp.

◆ COpenRange() [2/2]

template<class Position >
COpenRange< Position >::COpenRange ( void  )
inline

Definition at line 124 of file range.hpp.

◆ CRange() [1/3]

template<class Position >
CRange< Position >::CRange ( const TParent range)
inline

Definition at line 402 of file range.hpp.

◆ CRange() [2/3]

template<class Position >
CRange< Position >::CRange ( position_type  from,
position_type  to 
)
inline

Definition at line 398 of file range.hpp.

◆ CRange() [3/3]

template<class Position >
CRange< Position >::CRange ( void  )
inline

Definition at line 395 of file range.hpp.

◆ CRangeMap()

template<typename Mapped , typename Position = int>
CRangeMap< Mapped, Position >::CRangeMap ( void  )
inlineexplicit

Definition at line 563 of file rangemap.hpp.

◆ CRangeMapBase()

template<class Traits >
CRangeMapBase< Traits >::CRangeMapBase ( void  )
inlineprotected

Definition at line 410 of file rangemap.hpp.

◆ CRangeMapIterator() [1/2]

template<class Traits >
CRangeMapIterator< Traits >::CRangeMapIterator ( const typename TTraits::non_const_iterator &  iter)
inline

Definition at line 203 of file rangemap.hpp.

◆ CRangeMapIterator() [2/2]

template<class Traits >
CRangeMapIterator< Traits >::CRangeMapIterator ( void  )
inline

Definition at line 198 of file rangemap.hpp.

◆ CRangeMultimap()

template<typename Mapped , typename Position = int>
CRangeMultimap< Mapped, Position >::CRangeMultimap ( void  )
inlineexplicit

Definition at line 625 of file rangemap.hpp.

◆ DECLARE_OPERATOR_BOOL()

template<class Traits >
CRangeMapIterator< Traits >::DECLARE_OPERATOR_BOOL ( Valid()  )

◆ Empty() [1/2]

template<class Position >
bool CAlignRange< Position >::Empty ( void  ) const
inline

Definition at line 141 of file align_range.hpp.

References CAlignRange< Position >::m_Length.

◆ Empty() [2/2]

template<class Position >
bool COpenRange< Position >::Empty ( void  ) const
inline

Definition at line 148 of file range.hpp.

Referenced by CAlignCollapser::AddAlignment(), CGeneModel::AddExon(), CGraphRanges::AddRange(), CHandleRange::AddRange(), CDepthCollection::AddRange(), CDensityMap< CntType >::AddRange(), CBamFileRangeSet::AddRanges(), AddSupport(), CChain::CalculateDropLimits(), CFeatHistogramDS::CFeatHistogramDS(), CChainer::CChainerImpl::CheckCompatibility(), CheckSparseAln(), CCDSInfo::Clip(), CChain::ClipLowCoverageUTR(), CAlignCollapser::ClipNotSupportedFlanks(), CModelExon::CModelExon(), IAlnMultiDataSource::CollectAlignStats(), CGeneModel::CombineCdsInfo(), CCDSInfo::CombineWith(), CSeq_loc_Conversion::CombineWith(), SPhyloCSFSlice::CompactRange(), CAnnotationASN1::CImplementationData::create_packed_int_seqloc(), CGeneModel::CutExons(), CDataLoader::DetailsToChoice(), CEquivRange::Distance(), CAlignGlyph::DrawPWAlignElem(), DumpSparseAln(), CChainer::CChainerImpl::Duplicate5pendsAndShortCDSes(), CEquivRange::Empty(), CAlignCollapser::FilterAlignments(), CGeneSelector::FilterGenes(), CChainer::CChainerImpl::FilterOutTandemOverlap(), CChainer::CChainerImpl::FindAltsForGeneSeeds(), FindPolyA(), FindStartsStops(), CGeneModel::FShiftedLen(), CDensegGraphicDataSource::GetAlnSeqString(), CSparseAln::GetAlnSeqString(), CGnomonEngine::GetAnnot(), CVDBGraphSeqIterator::GetAnnot(), CSeqUtils::GetCdsMappingInfoFromRna(), CParse::GetGenes(), CGuiObjectInfoSeq_align::GetInsertionRanges(), SBamIndexRefIndex::GetLimitRange(), CHandleRange::GetRight(), CGnomonEngine::GetScore(), CEditScript::GetScore(), CSeq_align::GetSeqRange(), CHandleRange::GetStrandsFlag(), CChain::HarborsNested(), CGene::HarborsNested(), CSeqScores::Init(), CCddInputData::CHit::IntersectWith(), CSeq_loc_CI::IsEmpty(), IAlnSegment::IsGap(), CChain::MainPeaks(), CChainer::CChainerImpl::MakeChains(), CEditScript::MakeEditScript(), Map(), CGnomonAnnotator_Base::MapModelsToOrigContig(), CGnomonAnnotator_Base::MapOneModelToEditedContig(), CGnomonAnnotator_Base::MapOneModelToOrigContig(), CAlignMap::MapRangeEditedToOrig(), CAlignMap::MapRangeOrigToEdited(), CTestNameToInfoMapLoader::operator()(), SOutsideRange::operator()(), ParseAttributes(), CGnomonAnnotator::Predict(), readGFF3(), CAlignModel::RecalculateAlignMap(), CAlignCollapser::RemoveNotSupportedIntronsFromProt(), CAlignMarkHandler::Render(), CRuler::Render(), CChainer::CChainerImpl::ReplicatePStops(), CChain::RestoreReasonableConfirmedStart(), s_AlignDist(), s_MapSlaveFeatureToMaster(), s_SeqLocToTotalRangesInfoMapByStrand(), CClippedScorer::ScoreAlignments(), CSNPDbGraphIterator::Select(), CSNPDbPageIterator::Select(), CFeatureSearchJob::SeqLocToString(), CChain::SetConfirmedEnds(), CChain::SetConsistentCoverage(), CChainer::CChainerImpl::SetFlagsForChains(), CCDSInfo::SetReadingFrame(), CAlignCompare::SAlignment::Slice(), CEquivRangeBuilder::SliceOnQuery(), CEquivRangeBuilder::SliceOnSubjt(), SModelData::SModelData(), CEquivRangeBuilder::SplitIntersections(), CSeq_align::SplitOnLongDiscontinuity(), CBlobSplitterImpl::SplitPieces(), ProjectCDS::transform_align(), DoNotBelieveFrameShiftsWithoutCdsEvidence::transform_align(), CChainer::CChainerImpl::TrimAlignmentsIncludedInDifferentGenes(), CFeatureGenerator::SImplementation::TrimHolesToCodons(), TrimAlignment::TrimTranscript(), CMultAlign::Variations(), CHit::VerifyHit(), CAnnot_Collector::x_AddPostMappings(), CAnnot_Collector::x_AddPostMappingsCvt(), CPhrap_Read::x_AddQualityFeat(), CMultiAligner::x_AlignProfileProfileUsingHit(), CAlignMarkHandler::x_AlnRangeFromSeqRange(), COligoSpecificityCheck::x_AnalyzeLeftAndRightPrimer(), COligoSpecificityCheck::x_AnalyzeOnePrimer(), CAlignGlyph::x_CalcIntervals(), CScoringJob::x_CalculateAlignmentScores(), CHitMatrixDataSource::x_CalculateHitsRange(), CDenseg_CI::x_CheckSegment(), CSparse_CI::x_CheckSegment(), CSGAlignStatJob::x_CreatePileUpGraphs(), CMatePairGlyph::x_Draw(), CAlignGlyph::x_DrawAlignRowSequence(), CFeatGlyph::x_DrawFeatureBar(), CAlignGlyph::x_DrawGaps(), CFeatGlyph::x_DrawInnerLabels(), CVcfGlyph::x_DrawInnerLabels(), CAlignGlyph::x_DrawInserts(), CAlignGlyph::x_DrawInternalUnalignedRegions(), CAlignGlyph::x_DrawMultiAlign(), CCdsGlyph::x_DrawProjectedProtSeq(), CFeatGlyph::x_DrawProjectedRuler(), CCdsGlyph::x_DrawProtSeqWithMapping(), CFeatGlyph::x_DrawRNAProductSequence(), CAlignGlyph::x_DrawUnalignedBar(), CAlignGlyph::x_DrawUnalignedRowSequence(), CAlnVecRow::x_GetAlignmentTooltip_Helper(), CDisplaySeqalign::x_GetFeatureInfo(), CGuiObjectInfoSeq_feat::x_GetHitSeg(), CSeq_loc_Mapper_Base::x_InitializeLocs(), CPairwise_CI::x_InitSegment(), CSparse_CI::x_InitSegment(), CSeqGlyph::x_IntersectVisible(), CGencollIdMapper::x_IsLoc_Int_InAGap(), CMappingRange::x_Map_Fuzz(), CSeq_loc_Mapper_Base::x_MapInterval(), CSeq_loc_Mapper_Base::x_MapNextRange(), CSparse_CI::x_NextSegment(), CTextSelHandler::x_OnChangeSelRange(), CLinearSelHandler::x_OnEndSelRange(), CTextSelHandler::x_OnEndSelRange(), CMultiAligner::x_RealignBlocks(), CAlnVecRow::x_RenderAlignSegments(), CAlignGlyph::x_RenderAveragableScores(), CGraphOverlay::x_RenderContent(), CGraphTrack::x_RenderContent(), CTraceGraphTrack::x_RenderContent(), CRuler::x_RenderRange(), CRuler::x_RenderScale(), CSeqGraphicPane::x_RenderTooltipConnector(), CUnorderedSplitter::x_SplitDeltaExt(), CUnorderedSplitter::x_SplitSeqData(), CGraphOverlay::x_UpdateBoundingBox(), CGraphTrack::x_UpdateBoundingBox(), CGeneModelTrack::x_UpdateData(), CSeqGlyph::x_Visible_V(), and CHitMatrixWidget::x_ZoomToHits().

◆ empty()

template<class Traits >
bool CRangeMapBase< Traits >::empty ( void  ) const
inline

◆ end() [1/2]

template<class Traits >
iterator CRangeMapBase< Traits >::end ( void  )
inline

Definition at line 464 of file rangemap.hpp.

◆ end() [2/2]

template<class Traits >
const_iterator CRangeMapBase< Traits >::end ( void  ) const
inline

◆ erase() [1/2]

template<class Traits >
size_type CRangeMapBase< Traits >::erase ( const key_type key)
inline

Definition at line 511 of file rangemap.hpp.

◆ erase() [2/2]

template<class Traits >
void CRangeMapBase< Traits >::erase ( iterator  iter)
inline

◆ find() [1/2]

template<class Traits >
iterator CRangeMapBase< Traits >::find ( const key_type key)
inline

Definition at line 490 of file rangemap.hpp.

◆ find() [2/2]

template<class Traits >
const_iterator CRangeMapBase< Traits >::find ( const key_type key) const
inline

◆ Find()

template<class Traits >
void CRangeMapIterator< Traits >::Find ( const range_type key,
TSelectMapRef  selectMap 
)
private

◆ FirstContains()

template<class Position >
bool CAlignRange< Position >::FirstContains ( position_type  pos) const
inline

◆ FirstLevelIter()

template<class Traits >
TLevelIter CRangeMapIterator< Traits >::FirstLevelIter ( void  )
inlineprivate

◆ get_max_length()

template<typename Position , typename Mapped >
static position_type CRangeMapTraitsBase< Position, Mapped >::get_max_length ( const range_type key)
inlinestatic

Definition at line 86 of file rangemap.hpp.

References CHAR_BIT, ncbi::grid::netcache::search::fields::key, and len.

◆ GetEmpty() [1/2]

template<class Position >
static TThisType CAlignRange< Position >::GetEmpty ( void  )
inlinestatic

Definition at line 341 of file align_range.hpp.

◆ GetEmpty() [2/2]

template<class Position >
static TThisType COpenRange< Position >::GetEmpty ( void  )
inlinestatic

◆ GetEmptyFrom() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetEmptyFrom ( void  )
inlinestatic

Definition at line 325 of file align_range.hpp.

References CAlignRange< Position >::GetPositionMax().

◆ GetEmptyFrom() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetEmptyFrom ( void  )
inlinestatic

◆ GetEmptyLength() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetEmptyLength ( void  )
inlinestatic

Definition at line 337 of file align_range.hpp.

◆ GetEmptyLength() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetEmptyLength ( void  )
inlinestatic

Definition at line 302 of file range.hpp.

◆ GetEmptyTo() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetEmptyTo ( void  )
inlinestatic

Definition at line 333 of file align_range.hpp.

References CAlignRange< Position >::GetEmptyToOpen().

◆ GetEmptyTo() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetEmptyTo ( void  )
inlinestatic

◆ GetEmptyToOpen() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetEmptyToOpen ( void  )
inlinestatic

◆ GetEmptyToOpen() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetEmptyToOpen ( void  )
inlinestatic

◆ GetFirstFrom()

template<class Position >
position_type CAlignRange< Position >::GetFirstFrom ( void  ) const
inline

◆ GetFirstPosBySecondPos()

template<class Position >
position_type CAlignRange< Position >::GetFirstPosBySecondPos ( position_type  pos) const
inline

◆ GetFirstRange()

template<class Position >
TRange CAlignRange< Position >::GetFirstRange ( ) const
inline

◆ GetFirstTo()

template<class Position >
position_type CAlignRange< Position >::GetFirstTo ( void  ) const
inline

◆ GetFirstToOpen()

template<class Position >
position_type CAlignRange< Position >::GetFirstToOpen ( void  ) const
inline

◆ GetFrom()

template<class Position >
position_type COpenRange< Position >::GetFrom ( void  ) const
inline

◆ GetInterval()

template<class Traits >
range_type CRangeMapIterator< Traits >::GetInterval ( void  ) const
inline

◆ GetLength() [1/2]

template<class Position >
position_type CAlignRange< Position >::GetLength ( void  ) const
inline

◆ GetLength() [2/2]

template<class Position >
position_type COpenRange< Position >::GetLength ( void  ) const
inline

Definition at line 158 of file range.hpp.

Referenced by CMultAlign::AddAlignment(), CSAM_CIGAR_Formatter::AddRow(), CSeq_align::AlignLengthRatio(), AlignModelToSeqalign(), CAlnGraphic::AlnGraphicDisplay(), CConvertSelectedGaps::apply_impl(), CEditSelectedGaps::apply_impl(), BOOST_AUTO_TEST_CASE(), BuildAlignDataSource(), CEquivRangeBuilder::CalcMatches(), CChain::CalculateSupportAndWeightFromMembers(), CAlignModel::CAlignModel(), CAnnotObject_Ref::CAnnotObject_Ref(), CGeneModel::CdsInvariant(), CLocMapper_Default::CGappedRange::CGappedRange(), check_no_overlaps(), CChainer::CChainerImpl::CheckCompatibility(), CAlignCollapser::CleanSelfTranscript(), CChain::ClipChain(), CChain::ClipLowCoverageUTR(), IAlnMultiDataSource::CollectAlignStats(), CChain::CollectTrustedmRNAsProts(), CombineCorrectionsAndIndels(), CSeq_loc_Conversion_Set::ConvertInterval(), ConvertSeqLocsToPairwiseAln(), ConvertStdsegToPairwiseAln(), CSeq_loc_Conversion::CSeq_loc_Conversion(), EffectiveExonLength(), CMacroEngineParallel::Exec(), CAlignCollapser::FillGapsInAlignmentAndAddToGenomicGaps(), CAlignCollapser::FilterAlignments(), FindPolyTail(), CChainer::FindSelenoproteinsClipProteinsToStartStop(), CSeqGraphicWidget::FindText(), CAlignMap::FShiftedLen(), CSparseAlignment::GetAlnSeqString(), CDensegGraphicDataSource::GetAlnSeqString(), CSparseAln::GetAlnSeqString(), variation::CVariationUtil::CCdregionIndex::GetCachedLiteralAtLoc(), CGeneModel::GetCdsDnaSequence(), CBamRawAlignIterator::GetCIGARRefSize(), CBamRawAlignIterator::GetCIGARShortSize(), CSeq_loc::GetCircularLength(), CAlignCollapser::GetCollapsedAlgnments(), CSeq_loc_Conversion::GetDstPoint(), CShowBlastDefline::GetFormattingInfo(), SAlignmentScoringModel::GetGapLengthOnRow(), NSnpAnnot::GetGraph_CI(), CAlnStatGlyph::GetHTMLActiveAreas(), CHistogramGlyph::GetHTMLActiveAreas(), CLocMapper_Default::CGappedRange::GetIdentity(), CGuiObjectInfoSeq_align::GetInsertionRanges(), CSeq_featHandler::GetLabel(), NSnp::GetLength(), CCddInputData::CHitSegment::GetLength(), CPagedFile::GetPage(), GetProteinWeight(), CDenseSegHitElement::GetQueryLength(), CStdSegHitElement::GetQueryLength(), CCSraShortReadIterator::GetShortLen(), CSNPDbFeatIterator::GetSNPLength(), CDenseSegHitElement::GetSubjectLength(), CStdSegHitElement::GetSubjectLength(), GetUnalignedRegionLength(), CGeneModel::HasCompatibleOverlap(), CCrossPanelIR::HitTest(), CSparseAlignment::Init(), SChunkTranslator::Init(), CAlnGraphic::Init(), CBlastFormatUtil::InsertSubjectScores(), CSeq_align::IntronLengthRange(), CGeneModel::isCompatible(), CSeq_loc_CI::IsPoint(), CSeqGlyph::LessBySeqSize(), CmRNACDSLinker::LinkByLabelAndLocation(), CChainer::CChainerImpl::LRCanChainItoJ(), CChain::MainPeaks(), CChainer::CChainerImpl::MakeChains(), CGnomonAnnotator_Base::MapOneModelToEditedContig(), CGnomonAnnotator_Base::MapOneModelToOrigContig(), CEquivRangeBuilder::Merge(), ProteinWithBigHole::model_predicate(), CGeneModel::MutualExtension(), CSeqGraphicWidget::OnGoToMarker(), CwxExportVectorImageDlg::OnSaveClick(), SFeatLengthPredicate::operator()(), CAlignSort::SAlignExtractor::operator()(), operator<<(), PatchTargetSequence(), CChain::PeaksAndLimits(), CGnomonAnnotator::Predict(), CTabularFormatter_MismatchPositions::Print(), CTabularFormatter_AlignLengthRatio::Print(), readGFF3(), CDense_seg::RemapToLoc(), CLinearSelHandler::Render(), RestoreModelReadingFrame(), CChain::RestoreReasonableConfirmedStart(), RetrievePartsOfLargeChromosome(), CChainer::CChainerImpl::RightLeft(), s_CreateMappingInfo(), s_CreateObjList(), s_FindGaps(), s_GetUncoveredLength(), variation::CVariationUtil::s_ResolveIntronicOffsets(), CExpansionScorer::ScoreAlignments(), CHangScorer::ScoreAlignments(), CClippedScorer::ScoreAlignments(), CGnomonEngine::SelectBestReadingFrame(), SeqLocAllowed(), CReportEntry::SetCds(), CBlastTabularInfo::SetFields(), CEquivRangeBuilder::SliceOnQuery(), CEquivRangeBuilder::SliceOnSubjt(), CBlobSplitterImpl::SplitPieces(), sx_CalcFeatChunkPages(), CLocMapper_Default::CGappedRange::ToString(), CutShortPartialExons::transform_align(), CGeneModel::TrimEdgesToFrameInOtherAlignGaps(), CEditScript::VerifyScript(), CGuiObjectInfoSeq_feat::x_AddGroupLocationRows(), CGuiObjectInfoSeq_feat::x_AddLocationRows(), CMultiAligner::x_AlignProfileProfileUsingHit(), COligoSpecificityCheck::x_AnalyzeLeftAndRightPrimer(), COligoSpecificityCheck::x_AnalyzeOnePrimer(), CMultiAligner::x_BuildAlignmentIterative(), CPhyTreeCalc::x_CalcAlnSegInfo(), CScoringJob::x_CalculateAlignmentScores(), CVisibleRange::x_Clamp(), CAdvancedAlignCleanup::x_CleanupProsplignCompartment(), CAlnSpanVertModel::x_ConvertRowsToSpans(), CSeq_align_Mapper::x_ConvertSegmentCvt(), CInversionMergeAligner::x_CreateDiscAlignment(), CSGAlignmentJob::x_CreateFeatGlyph(), CSGAlignStatJob::x_CreatePileUpGraphs(), CCreateNeedlemanWunschJob::x_CreateProjectItems(), CDisplaySeqalign::x_DoFills(), CCpgSearchJob::x_DoSearch(), CClonePlacementGlyph::x_Draw(), CCommentGlyph::x_Draw(), CMatePairGlyph::x_Draw(), CSegmentGlyph::x_Draw(), CLinkedFeatsGroup::x_DrawChildrenOnParent(), CCrossPanelIR::x_DrawCrossAlignment(), CFeatGlyph::x_DrawFeatureBar(), CFeatGlyph::x_DrawFeatureBar_sv(), CSeqGlyph::x_DrawInnerLabelColumns(), CSeqGlyph::x_DrawInnerLabels(), CAlignGlyph::x_DrawInserts(), CAlignGlyph::x_DrawInternalUnalignedRegions(), CLinkedFeatsGroup::x_DrawLabels(), CFeatGlyph::x_DrawLabelWithXPinned(), CVcfGlyph::x_DrawLabelWithXPinned(), CAlignGlyph::x_DrawMultiAlign(), CAlignGlyph::x_DrawMultiAlignLabel(), CCdsGlyph::x_DrawProjectedProtSeq(), CCdsGlyph::x_DrawProtSeqWithMapping(), CAlignGlyph::x_DrawPWAlign(), CCrossPanelIR::x_DrawSequence(), CVcfGlyph::x_DrawVariationBar(), CSGAlignStatJob::x_Execute(), CSGFeatureJob::x_Execute(), CSGSegmentMapJob::x_Execute(), CSFTranslationJob::x_Execute(), CVcfFeatureJob::x_Execute(), CSnpJob::x_FetchGraphs(), COligoSpecificityCheck::x_FillGlobalAlignInfo(), CDisplaySeqalign::x_FillInserts(), CMultiAligner::x_FindConservedColumns(), CMultiAligner::x_FindConstraints(), COligoSpecificityCheck::x_FindOverlappingHSP(), CCIGAR_Formatter::x_FormatLine(), CAlnVecRow::x_GetAlignmentTooltip_Gap(), CAlnVecRow::x_GetAlignmentTooltip_Helper(), CGuiObjectInfoSeq_feat::x_GetHitSeg(), CSeq_loc_Mapper_Base::x_GetRangeLength(), CDistances::x_GetSelfScores(), CGuiObjectInfoSeq_feat::x_GetSplicedSeqTitle(), CAlignedFeatureGraph::x_GetTooltip(), CAlnVecRow::x_GetTooltipSequence(), CGuiObjectInfoSeq_align::x_GetTooltipSequence(), CFeatureGenerator::SImplementation::x_HandleCdsExceptions(), CSeq_align_Mapper_Base::x_Init(), CSeq_loc_Mapper_Base::x_InitAlign(), CShowBlastDefline::x_InitDeflineTable(), CSeq_loc_Mapper::x_InitGCSequence(), CSparse_CI::x_InitSegment(), COligoSpecificityCheck::x_IsPcrLengthInRange(), CUnorderedSplitter::x_MakeAlignmentPairUnique(), CSeq_loc_Mapper_Base::x_MapInterval(), CSeq_loc_Mapper_Base::x_MapNextRange(), x_MatchSubHits(), variation_ref::CHgvsParser::x_nuc_inv(), CAlignedFeatureGraph::x_PlaceCluster(), CAlnSpanVertModel::x_PopulateRows(), CGeneModelFeatJob::x_ProcessLandMarkFeatures(), CXcompareAnnotsApplication::x_ProcessSeqAlignSetFromFile(), CMultiAligner::x_RealignBlocks(), CSeqGraphicPane::x_RenderTooltipConnector(), CInversionMergeAligner::x_RunMerger(), CMagicBlastResults::x_SetInfo(), CUnorderedSplitter::x_SplitDeltaExt(), CAlnStatGlyph::x_UpdateBoundingBox(), CClonePlacementGlyph::x_UpdateBoundingBox(), CFeatGlyph::x_UpdateBoundingBox(), CLayoutTrack::x_UpdateBoundingBox(), CNamedGroup::x_UpdateBoundingBox(), CTraceGlyph::x_UpdateBoundingBox(), CVcfGlyph::x_UpdateBoundingBox(), CAlignmentTrack::x_UpdateData(), CGraphOverlay::x_UpdateLegend(), CHistogramGlyph::x_UpdateLegend(), CValidError_align::x_ValidateAlignPercentIdentity(), CSplitQueryTestFixture::x_ValidateChunkBounds(), and CGff3Writer::xAssignAlignmentDensegGap().

◆ GetLevelIter()

template<class Traits >
TLevelIter CRangeMapIterator< Traits >::GetLevelIter ( void  ) const
inline

◆ GetLevelIterEnd()

template<class Traits >
TLevelIter CRangeMapIterator< Traits >::GetLevelIterEnd ( void  ) const
inline

◆ GetPositionMax() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetPositionMax ( void  )
inlinestatic

◆ GetPositionMax() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetPositionMax ( void  )
inlinestatic

Definition at line 250 of file range.hpp.

Referenced by CAlnSpanVertModel::x_PopulateRows().

◆ GetPositionMin() [1/2]

template<class Position >
static position_type CAlignRange< Position >::GetPositionMin ( void  )
inlinestatic

Definition at line 345 of file align_range.hpp.

References min().

◆ GetPositionMin() [2/2]

template<class Position >
static position_type COpenRange< Position >::GetPositionMin ( void  )
inlinestatic

Definition at line 246 of file range.hpp.

◆ GetRange()

template<class Traits >
const range_type& CRangeMapIterator< Traits >::GetRange ( void  ) const
inline

Definition at line 212 of file rangemap.hpp.

References CRangeMapIterator< Traits >::m_Range.

◆ GetSecondFrom()

template<class Position >
position_type CAlignRange< Position >::GetSecondFrom ( void  ) const
inline

◆ GetSecondPosByFirstPos()

template<class Position >
position_type CAlignRange< Position >::GetSecondPosByFirstPos ( position_type  pos) const
inline

◆ GetSecondRange()

template<class Position >
TRange CAlignRange< Position >::GetSecondRange ( ) const
inline

◆ GetSecondTo()

template<class Position >
position_type CAlignRange< Position >::GetSecondTo ( void  ) const
inline

◆ GetSecondToOpen()

template<class Position >
position_type CAlignRange< Position >::GetSecondToOpen ( void  ) const
inline

◆ GetSelectIter()

template<class Traits >
TSelectIter CRangeMapIterator< Traits >::GetSelectIter ( void  ) const
inline

◆ GetSelectIterEnd()

template<class Traits >
TSelectIter CRangeMapIterator< Traits >::GetSelectIterEnd ( void  ) const
inline

◆ GetTo()

template<class Position >
position_type COpenRange< Position >::GetTo ( void  ) const
inline

◆ GetToOpen()

template<class Position >
position_type COpenRange< Position >::GetToOpen ( void  ) const
inline

Definition at line 138 of file range.hpp.

Referenced by CDensityMap< CntType >::AddRange(), CSAM_CIGAR_Formatter::AddRow(), CDiscrepancyVisitorImpl< _Name >::Autofix(), BOOST_AUTO_TEST_CASE(), CdsTrnaOverlapStr(), CFeatHistogramDS::CFeatHistogramDS(), CIdRangeMap::CIdRangeMap(), CDiscrepancyContext::Compare(), CAlignGlyph::DrawPWAlignElem(), DumpPairwiseAln(), SAnnotObject_Key::end(), CPrefetchSeqData::Execute(), SWGSFeatChunkInfo::SFeatureSet::ExpandRange(), CDensegGraphicDataSource::GetAlnSeqString(), CSparseAln::GetAlnSeqString(), CVDBGraphSeqIterator::GetAnnot(), CConvertBadCdsAndRnaToMiscFeat::getCdsOverlap(), CSNPDbSeqIterator::GetEntry(), CFeatHistogramDS::GetLimit(), SBamIndexRefIndex::GetLimitRange(), CMaskedRangeSet::GetRanges(), CConvertBadCdsAndRnaToMiscFeat::getRnaOverlap(), CGuiObjectInfoSeq_align::GetSeqString(), CDensegGraphicDataSource::GetSeqString(), CSparseAln::GetSeqString(), CSNPDbSeqIterator::GetSplitInfoAndVersion(), CAnnotMapping_Info::GetToOpen(), CBam2Seq_graph::MakeSeq_entry(), CPairwise_CI::operator bool(), SSortSourceByLoc::operator()(), CBinaryRangeCacheWithLock< Position, Value >::PLess::operator()(), operator<<(), PatchTargetSequence(), PrintSAM(), CAlignMarkHandler::Render(), CLinearSelHandler::Render(), s_CheckAbutting(), s_CompareRanges(), s_GetCigarString(), s_IsNotSubrange(), s_SeqLocToRangeInfoMap(), s_SeqLocToRangeInfoMapByStrand(), s_SeqLocToTotalRangeInfoMap(), s_SetSplitQuerySeqInterval(), CSplitQueryBlk::SetChunkBounds(), CFeatHistogramDS::Update(), CSGAnnotJob::x_AddGraphToMap(), CDensityMap< score_type >::x_CalcNbins(), CAdvancedAlignCleanup::x_CleanupProsplignAsGenomic(), CSGAlignStatJob::x_CollectAlignStats(), x_CollectCoverageGraph(), CSplitQueryTestFixture::x_ComputeQueryChunkBounds(), CAlignGlyph::x_ConvertAlnTaillRngToSeqRng(), CSGAlignStatJob::x_CreatePileUpGraphs(), CFeatGlyph::x_DrawAdditionalInfo(), CVcfGlyph::x_DrawAdditionalInfo(), CFeatGlyph::x_DrawFeatureBar(), CFeatGlyph::x_DrawInnerLabels(), CVcfGlyph::x_DrawInnerLabels(), CAlignGlyph::x_DrawInternalUnalignedRegions(), CLinkedFeatsGroup::x_DrawLabels(), CFeatGlyph::x_DrawLabelWithYPinned(), CVcfGlyph::x_DrawLabelWithYPinned(), CFeatGlyph::x_DrawRNAProductSequence(), CAlignGlyph::x_DrawTailGlyphs(), CAlignGlyph::x_DrawUnalignedBar(), CGuiObjectInfoSeq_align::x_GetAlignmentTooltip_Insert(), CDensegGraphicDataSource::x_GetAlnStringFromCigar(), CAnnotObject_Less::x_GetExtremes(), CAlignMarkHandler::x_HitTest(), CAlignMarkHandler::x_InitDeltaMap(), CBlastHitMatrix::x_InitPort(), CDenseg_CI::x_InitSegment(), CPairwise_CI::x_InitSegment(), CSparse_CI::x_InitSegment(), CID2SNPProcessor_Impl::x_LoadBlob(), CBamRawAlignIterator::x_NeedToSkip(), CSNPDbGraphIterator::x_Next(), CLinearSelHandler::x_OnChangeSelRange(), CTextSelHandler::x_OnChangeSelRange(), CAlnSpanVertModel::x_PopulateRows(), CSeq_loc_Mapper_Base::x_PushMappedRange(), CRuler::x_RenderAllPosLabels(), CAlignGlyph::x_RenderAveragableScores(), CRuler::x_RenderBackground(), CAlnVecRow::x_RenderInserts(), CAlignGlyph::x_RenderNonAveragableScores(), CRuler::x_RenderOriginAndMetric(), CHitMatrixWidget::x_SetPortLimits(), CSeqGraphicRenderer::x_SetupModelLimits(), CAlignMarkHandler::x_UpdateMarks(), CSeq_annot_SortedIter::x_Valid(), CSplitQueryTestFixture::x_ValidateChunkBounds(), CSplitQueryTestFixture::x_ValidateQuerySeqLocsPerChunk(), and CHitMatrixWidget::x_ZoomToHits().

◆ GetWhole()

template<class Position >
static TThisType COpenRange< Position >::GetWhole ( void  )
inlinestatic

◆ GetWholeFrom()

template<class Position >
static position_type COpenRange< Position >::GetWholeFrom ( void  )
inlinestatic

◆ GetWholeLength()

template<class Position >
static position_type COpenRange< Position >::GetWholeLength ( void  )
inlinestatic

Definition at line 268 of file range.hpp.

◆ GetWholeTo()

template<class Position >
static position_type COpenRange< Position >::GetWholeTo ( void  )
inlinestatic

Definition at line 264 of file range.hpp.

Referenced by CAnnotWriterApp::xGetTo().

◆ GetWholeToOpen()

template<class Position >
static position_type COpenRange< Position >::GetWholeToOpen ( void  )
inlinestatic

Definition at line 260 of file range.hpp.

◆ insert() [1/2]

template<typename Mapped , typename Position = int>
pair<iterator, bool> CRangeMap< Mapped, Position >::insert ( const value_type value)
inline

◆ insert() [2/2]

template<typename Mapped , typename Position = int>
iterator CRangeMultimap< Mapped, Position >::insert ( const value_type value)
inline

◆ insertLevel()

template<class Traits >
TSelectMapI CRangeMapBase< Traits >::insertLevel ( position_type  key)
inlineprotected

Definition at line 417 of file rangemap.hpp.

◆ IntersectingWith() [1/2]

template<class Position >
bool CAlignRange< Position >::IntersectingWith ( const CRange< position_type > &  r) const
inline

◆ IntersectingWith() [2/2]

template<class Position >
bool COpenRange< Position >::IntersectingWith ( const TThisType r) const
inline

Definition at line 331 of file range.hpp.

Referenced by CEquivRange::CalcRelativeDuo(), CChain::CalculateSupportAndWeightFromMembers(), CChain::CChain(), CChainer::CChainerImpl::CheckCompatibility(), CChainer::CChainerImpl::CombineCompatibleChains(), CAnnotationASN1::CImplementationData::create_internal_feature(), CChainer::CChainerImpl::CreateChainsForPartialProteins(), CCDSInfo::Cut(), NSnpAnnot::EstimateSNPCount(), CChainer::CChainerImpl::FindOptimalChainForProtein(), CGetFeature::GetFeatInfo(), CChain::HarborsNested(), CSeqScores::Init(), CEquivRange::IntersectingWith(), CGeneModel::IntersectingWith(), CHandleRange::IntersectingWithTotalRange(), C2DLayoutEngine::Layout(), CChainer::CChainerImpl::MakeChains(), CAlignFilter::Match(), CDepthCollection::MinDepthForRange(), CSeqGraphicPane::OnSearchTip(), CGnomonAnnotator::Predict(), CTestSingleAln_All::RunTest(), s_Distance(), s_GetUncoveredLength(), s_IsOverlapping(), s_MergeRangeList(), s_SeqIntervalToSeqLocInfo(), s_SetSplitQuerySeqInterval(), CReportEntry::SetCds(), CChain::SetConfirmedStartStopForCompleteProteins(), CEquivRangeBuilder::SplitIntersections(), CMultiAligner::x_AssignRPSResFreqs(), CVecscreen::x_BuildNonOverlappingRange(), CFeatureGenerator::SImplementation::x_CheckMatch(), CQuerySplitter::x_ComputeQueryIndicesForChunks(), CQuerySet::x_ContainsAlignment(), CInversionMergeAligner::x_CreateDiscAlignment(), CDisplaySeqalign::x_DisplayRowDataSet(), CCrossPanelIR::x_DrawCrossAlignment(), CFeatGlyph::x_DrawFeatureBar(), CSGAlignmentJob::x_GetAlignments(), CTranslationGlyph::x_Intersecting(), CLayeredLayout::x_LayerBySize(), CVecscreen::x_MergeInclusiveSeqalign(), CVecscreen::x_MergeLowerRankSeqalign(), CAllOtherFeaturesTrack::x_OnAllJobsFinished(), CTrackContainer::x_OnJobCompleted(), CDisplaySeqalign::x_PrintFeatures(), CDisplaySeqalign::x_ProcessRowDataSet(), CInversionMergeAligner::x_RunMerger(), and COligoSpecificityCheck::x_SavePrimerInfo().

◆ IntersectionWith() [1/2]

template<class Position >
TThisType CAlignRange< Position >::IntersectionWith ( const CRange< position_type > &  r) const
inline

Intersection.

Definition at line 242 of file align_range.hpp.

References CAlignRange< Position >::IntersectWith(), and r().

◆ IntersectionWith() [2/2]

template<class Position >
TThisType COpenRange< Position >::IntersectionWith ( const TThisType r) const
inline

◆ IntersectSecondWith()

template<class Position >
TThisType& CAlignRange< Position >::IntersectSecondWith ( const CRange< position_type > &  r)
inline

◆ IntersectWith() [1/2]

template<class Position >
TThisType& CAlignRange< Position >::IntersectWith ( const CRange< position_type > &  r)
inline

◆ IntersectWith() [2/2]

template<class Position >
TThisType& COpenRange< Position >::IntersectWith ( const TThisType r)
inline

◆ IsAbutting()

template<class Position >
bool CAlignRange< Position >::IsAbutting ( const TThisType r) const
inline

◆ IsDirect()

template<class Position >
bool CAlignRange< Position >::IsDirect ( void  ) const
inline

◆ IsFirstDirect()

template<class Position >
bool CAlignRange< Position >::IsFirstDirect ( ) const
inline

◆ IsFirstReversed()

template<class Position >
bool CAlignRange< Position >::IsFirstReversed ( ) const
inline

◆ IsNegative() [1/2]

template<class Position >
static bool SPositionTraitsBySignedness< true, Position >::IsNegative ( Position  pos)
inlinestatic

Definition at line 67 of file range.hpp.

◆ IsNegative() [2/2]

template<class Position >
static bool SPositionTraitsBySignedness< false, Position >::IsNegative ( Position  )
inlinestatic

Definition at line 78 of file range.hpp.

◆ IsReversed()

template<class Position >
bool CAlignRange< Position >::IsReversed ( void  ) const
inline

◆ IsWhole()

template<class Position >
bool COpenRange< Position >::IsWhole ( void  ) const
inline

◆ IsWholeFrom()

template<class Position >
bool COpenRange< Position >::IsWholeFrom ( void  ) const
inline

Definition at line 276 of file range.hpp.

◆ IsWholeTo()

template<class Position >
bool COpenRange< Position >::IsWholeTo ( void  ) const
inline

Definition at line 280 of file range.hpp.

◆ NotEmpty() [1/2]

template<class Position >
bool CAlignRange< Position >::NotEmpty ( void  ) const
inline

◆ NotEmpty() [2/2]

template<class Position >
bool COpenRange< Position >::NotEmpty ( void  ) const
inline

Definition at line 152 of file range.hpp.

Referenced by CChain::AddAllMembersAndCoverage(), CDepthCollection::AddRange(), AlignModelToSeqalign(), CFeatTrim::Apply(), BOOST_AUTO_TEST_CASE(), CChain::CalculateSupportAndWeightFromMembers(), CChain::CChain(), CAlignCollapser::CleanSelfTranscript(), CGeneModel::Clip(), CChain::ClipChain(), CChain::ClipToCap(), CChain::ClipToPolyA(), CollectAttributes(), CAnnotationASN1::CImplementationData::create_internal_feature(), CAnnotationASN1::CImplementationData::create_packed_int_seqloc(), CGeneModel::Extend(), CBlastDBExtractor::ExtractFasta(), CAlignCollapser::FilterAlignments(), CChainer::CChainerImpl::FindContainedAlignments(), CChainer::CChainerImpl::FindGeneSeeds(), CChainer::FindSelenoproteinsClipProteinsToStartStop(), FindStartsStops(), CDensegGraphicDataSource::GetAlnSeqString(), CParse::GetGenes(), CGeneModel::GetInDels(), CGnomonEngine::GetScore(), GetWallLimits(), CCDSInfo::HasStart(), CCDSInfo::HasStop(), CSeqScores::Init(), CAlignCollapser::InitContig(), CBlastFormatUtil::InsertSubjectScores(), CCDSInfo::MapFromEditedToOrig(), CCDSInfo::MapFromOrigToEdited(), CGnomonAnnotator_Base::MapOneModelToEditedContig(), CGnomonAnnotator_Base::MapOneModelToOrigContig(), CEquivRange::NotEmpty(), CAlnMultiWidget::OnUpdateZoomSelection(), CGeneModel::OpenLeftEnd(), CGeneModel::OpenRightEnd(), ParseAttributes(), CChain::PeaksAndLimits(), CGnomonAnnotator::Predict(), printGFF3(), readGFF3(), CCDSInfo::Remap(), CAlignCollapser::RemoveNotSupportedIntronsFromTranscript(), RestoreModelAttributes(), CChain::RestoreReasonableConfirmedStart(), CChain::SetBestPlacement(), CChain::SetConsistentCoverage(), CBlastTabularInfo::SetFields(), CChainer::CChainerImpl::SetFlagsForChains(), CCDSInfo::SetStop(), CAlignMap::ShrinkToRealPoints(), CAlignMap::ShrinkToRealPointsOnEdited(), spliced_exon(), CSeq_align::SplitOnLongDiscontinuity(), CutShortPartialExons::transform_align(), CChainer::CChainerImpl::TrimAlignmentsIncludedInDifferentGenes(), CGeneModel::TrimEdgesToFrameInOtherAlignGaps(), TrimAlignment::TrimProtein(), TrimAlignment::TrimTranscript(), CMultAlign::Variations(), CMultiAligner::x_AlignProfileProfileUsingHit(), CDenseg_CI::x_CheckSegment(), CSplitQueryTestFixture::x_ComputeQueryChunkBounds(), CLinkedFeatsGroup::x_DrawFeatureBar(), CFeatureGenerator::SImplementation::x_HandleRnaExceptions(), CAlignMarkHandler::x_HitRangeBorder(), CAlignMarkHandler::x_InitDeltaMap(), CRangeCollection< TSeqPos >::x_IntersectWith(), CRangeSet< CPairwiseAln::TPos >::x_IntersectWith(), CGBDataLoader_Native::x_MakeContentMask(), CLinearSelHandler::x_OnSelectCursor(), CTextSelHandler::x_OnSelectCursor(), CLinearSelHandler::x_OnStartSel(), CTextSelHandler::x_OnStartSel(), CTraceGraph::x_RenderContour(), CUnorderedSplitter::x_SplitDeltaExt(), CUnorderedSplitter::x_SplitSeqData(), CUnorderedSplitter::x_TrimRows(), CVcfWriter::x_WriteData(), CGff2Writer::xAssignFeatureAttributePartial(), and CAlnMultiWidget::ZoomToSelection().

◆ operator!=() [1/3]

template<class Traits >
bool CRangeMapIterator< Traits >::operator!= ( const TThisType iter) const
inline

Definition at line 247 of file rangemap.hpp.

◆ operator!=() [2/3]

template<class Position >
bool CAlignRange< Position >::operator!= ( const TThisType r) const
inline

Definition at line 207 of file align_range.hpp.

References r().

◆ operator!=() [3/3]

template<class Position >
bool COpenRange< Position >::operator!= ( const TThisType r) const
inline

Definition at line 219 of file range.hpp.

◆ operator&()

template<class Position >
TThisType COpenRange< Position >::operator& ( const TThisType r) const
inline

Definition at line 323 of file range.hpp.

◆ operator&=()

template<class Position >
TThisType& COpenRange< Position >::operator&= ( const TThisType r)
inline

Definition at line 327 of file range.hpp.

◆ operator()() [1/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( const TAlignRange r,
position_type  pos 
)
inline

Definition at line 52 of file align_range_oper.hpp.

References r().

◆ operator()() [2/9]

template<class TAlignRange >
bool PAlignRangeFromLess< TAlignRange >::operator() ( const TAlignRange r,
position_type  pos 
)
inline

Definition at line 83 of file align_range_oper.hpp.

References r().

◆ operator()() [3/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( const TAlignRange r1,
const TAlignRange r2 
)
inline

Definition at line 60 of file align_range_oper.hpp.

◆ operator()() [4/9]

template<class TAlignRange >
bool PAlignRangeFromLess< TAlignRange >::operator() ( const TAlignRange r_1,
const TAlignRange r_2 
)
inline

Definition at line 91 of file align_range_oper.hpp.

◆ operator()() [5/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( const TAlignRange r,
position_type  pos 
)
inline

Definition at line 64 of file align_range_oper.hpp.

References r().

◆ operator()() [6/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( const TAlignRange r1,
const TAlignRange r2 
)
inline

Definition at line 72 of file align_range_oper.hpp.

◆ operator()() [7/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( position_type  pos,
const TAlignRange r 
)
inline

Definition at line 56 of file align_range_oper.hpp.

References r().

◆ operator()() [8/9]

template<class TAlignRange >
bool PAlignRangeFromLess< TAlignRange >::operator() ( position_type  pos,
const TAlignRange r 
)
inline

Definition at line 87 of file align_range_oper.hpp.

References r().

◆ operator()() [9/9]

template<class TAlignRange >
bool PAlignRangeToLess< TAlignRange >::operator() ( position_type  pos,
const TAlignRange r 
)
inline

Definition at line 68 of file align_range_oper.hpp.

References r().

◆ operator*()

template<class Traits >
reference CRangeMapIterator< Traits >::operator* ( void  ) const
inline

Definition at line 257 of file rangemap.hpp.

References CRangeMapIterator< Traits >::GetLevelIter().

◆ operator+()

template<class Position >
TThisType COpenRange< Position >::operator+ ( const TThisType r) const
inline

Definition at line 375 of file range.hpp.

◆ operator++()

template<class Traits >
TThisType& CRangeMapIterator< Traits >::operator++ ( void  )
inline

◆ operator+=()

template<class Position >
TThisType& COpenRange< Position >::operator+= ( const TThisType r)
inline

Definition at line 371 of file range.hpp.

◆ operator->()

template<class Traits >
pointer CRangeMapIterator< Traits >::operator-> ( void  ) const
inline

Definition at line 261 of file rangemap.hpp.

References CRangeMapIterator< Traits >::GetLevelIter().

◆ operator<()

template<class Position >
bool COpenRange< Position >::operator< ( const TThisType r) const
inline

Definition at line 223 of file range.hpp.

◆ operator<<()

template<class Position >
CNcbiOstream& operator<< ( CNcbiOstream out,
const COpenRange< Position > &  range 
)
inline

Definition at line 426 of file range.hpp.

◆ operator<=()

template<class Position >
bool COpenRange< Position >::operator<= ( const TThisType r) const
inline

Definition at line 228 of file range.hpp.

◆ operator=()

template<class Position >
TThisType& CRange< Position >::operator= ( const TParent range)
inline

Definition at line 408 of file range.hpp.

◆ operator==() [1/3]

template<class Traits >
bool CRangeMapIterator< Traits >::operator== ( const TThisType iter) const
inline

◆ operator==() [2/3]

template<class Position >
bool CAlignRange< Position >::operator== ( const TThisType r) const
inline

◆ operator==() [3/3]

template<class Position >
bool COpenRange< Position >::operator== ( const TThisType r) const
inline

Definition at line 215 of file range.hpp.

◆ operator>()

template<class Position >
bool COpenRange< Position >::operator> ( const TThisType r) const
inline

Definition at line 233 of file range.hpp.

◆ operator>=()

template<class Position >
bool COpenRange< Position >::operator>= ( const TThisType r) const
inline

Definition at line 238 of file range.hpp.

◆ operator[]()

template<typename Mapped , typename Position = int>
mapped_type& CRangeMap< Mapped, Position >::operator[] ( const key_type key)
inline

◆ SecondContains()

template<class Position >
bool CAlignRange< Position >::SecondContains ( position_type  pos) const
inline

◆ Set() [1/2]

template<class Position >
TThisType& CAlignRange< Position >::Set ( position_type  first_from,
position_type  second_from,
position_type  len 
)
inline

◆ Set() [2/2]

template<class Position >
TThisType& COpenRange< Position >::Set ( position_type  from,
position_type  to 
)
inline

Definition at line 188 of file range.hpp.

Referenced by CAlnGraphic::AlnGraphicDisplay(), CSparseAlignment::Clear(), CAlnVecPrinter::ClustalStyle(), COligoSpecificityTemplate::COligoSpecificityTemplate(), FindPolyTail(), CScore_EdgeExonInfo::Get(), CSeqUtils::GetCdsMappingInfoFromRna(), CRsitesGlyph::GetHTMLActiveAreas(), CLegendItemGlyph::GetHTMLActiveAreas(), CAlignFormatUtil::GetMasterCoverage(), CAlnVecRow::GetRowStatistics(), CAdvancedAlignCleanup::GetSplignCompartments(), CSparseSegment::Init(), CAlnGraphic::Init(), CSeqGraphicWidget::OnSetSeqMarkerForSelDlg(), CAlnVecPrinter::PopsetStyle(), CRenderingContext::PrepareContext(), CPhrap_Read::ReadQuality(), s_FixMinusStrandRange(), s_GetCountIdentityMismatch(), s_ProcessAlignSet(), CwxExportVectorImageDlg::SetSeqRange(), CSixFramesTransTrack::Update(), CAlnVwrApp::View8(), CVecscreen::x_BuildNonOverlappingRange(), CHitMatrixDataSource::x_CalculateHitsRange(), CSeq_loc::x_CalculateTotalRangeCheckId(), CAlignGlyph::x_DrawAlignRowSequence(), CFeatGlyph::x_DrawFeatureBar(), CAlignGlyph::x_DrawMultiAlign(), CVecscreen::x_GetAlnInfo(), CGuiObjectInfoSeq_feat::x_GetHitSeg(), CAlnVecRow::x_GetTooltipSequence(), CGuiObjectInfoSeq_align::x_GetTooltipSequence(), CGraphOverlay::x_LoadSettings(), CGraphTrack::x_LoadSettings(), CSeq_loc_Mapper_Base::x_MapNextRange(), CVecscreen::x_MergeLowerRankSeqalign(), CSixFramesTransTrack::x_OnContentIconClicked(), CSixFramesTransTrack::x_OnGeneticIconClicked(), CSixFramesTransTrack::x_OnSettingIconClicked(), CDisplaySeqalign::x_OutputSeq(), CAlnSpanVertModel::x_PopulateRowsSpliced(), CMultiAligner::x_RealignBlocks(), CAnnot_Collector::x_SearchRange(), CSixFramesTransTrack::x_UpdateData(), and x_UpdateRanges().

◆ SetBegin() [1/2]

template<class Traits >
void CRangeMapIterator< Traits >::SetBegin ( const range_type range,
TSelectMapRef  selectMap 
)
inlineprivate

◆ SetBegin() [2/2]

template<class Traits >
void CRangeMapIterator< Traits >::SetBegin ( TSelectMapRef  selectMap)
inlineprivate

◆ SetDirect()

template<class Position >
void CAlignRange< Position >::SetDirect ( bool  direct = true)
inline

◆ SetEnd()

template<class Traits >
void CRangeMapIterator< Traits >::SetEnd ( TSelectMapRef  selectMap)
inlineprivate

◆ SetFirstDirect()

template<class Position >
void CAlignRange< Position >::SetFirstDirect ( bool  direct = true)
inline

◆ SetFirstFrom()

template<class Position >
TThisType& CAlignRange< Position >::SetFirstFrom ( position_type  from)
inline

◆ SetFirstReversed()

template<class Position >
void CAlignRange< Position >::SetFirstReversed ( bool  reversed = true)
inline

◆ SetFrom()

template<class Position >
TThisType& COpenRange< Position >::SetFrom ( position_type  from)
inline

◆ SetLength() [1/2]

template<class Position >
TThisType& CAlignRange< Position >::SetLength ( position_type  len)
inline

◆ SetLength() [2/2]

template<class Position >
TThisType& COpenRange< Position >::SetLength ( position_type  length)
inline

◆ SetLengthDown()

template<class Position >
TThisType& COpenRange< Position >::SetLengthDown ( position_type  length)
inline

◆ SetLevelIter()

template<class Traits >
bool CRangeMapIterator< Traits >::SetLevelIter ( TLevelIter  levelIter)
inlineprivate

◆ SetOpen()

template<class Position >
TThisType& COpenRange< Position >::SetOpen ( position_type  from,
position_type  toOpen 
)
inline

◆ SetReversed()

template<class Position >
void CAlignRange< Position >::SetReversed ( bool  reversed = true)
inline

◆ SetSecondFrom()

template<class Position >
TThisType& CAlignRange< Position >::SetSecondFrom ( position_type  second_from)
inline

◆ SetTo()

template<class Position >
TThisType& COpenRange< Position >::SetTo ( position_type  to)
inline

Definition at line 180 of file range.hpp.

◆ SetToOpen()

template<class Position >
TThisType& COpenRange< Position >::SetToOpen ( position_type  toOpen)
inline

◆ size()

template<class Traits >
size_type CRangeMapBase< Traits >::size ( void  ) const
inline

Definition at line 432 of file rangemap.hpp.

◆ swap()

template<class Traits >
void CRangeMapBase< Traits >::swap ( TThisType rangeMap)
inline

Definition at line 528 of file rangemap.hpp.

◆ Valid()

template<class Traits >
bool CRangeMapIterator< Traits >::Valid ( void  ) const
inline

Variable Documentation

◆ m_FirstFrom

template<class Position >
position_type CAlignRange< Position >::m_FirstFrom
private

◆ m_Flags

template<class Position >
int CAlignRange< Position >::m_Flags
private

◆ m_From

template<class Position >
position_type COpenRange< Position >::m_From
private

Definition at line 381 of file range.hpp.

◆ m_Length

template<class Position >
position_type CAlignRange< Position >::m_Length
private

◆ m_LevelIter

template<class Traits >
TLevelIter CRangeMapIterator< Traits >::m_LevelIter
private

◆ m_Range

template<class Traits >
range_type CRangeMapIterator< Traits >::m_Range
private

◆ m_SecondFrom

template<class Position >
position_type CAlignRange< Position >::m_SecondFrom
private

◆ m_SelectIter

template<class Traits >
TSelectIter CRangeMapIterator< Traits >::m_SelectIter
private

◆ m_SelectIterEnd

template<class Traits >
TSelectIter CRangeMapIterator< Traits >::m_SelectIterEnd
private

◆ m_SelectMap

template<class Traits >
TSelectMap CRangeMapBase< Traits >::m_SelectMap
protected

◆ m_ToOpen

template<class Position >
position_type COpenRange< Position >::m_ToOpen
private

Definition at line 381 of file range.hpp.

Friends

◆ CRangeMap< mapped_type, position_type >

template<class Traits >
friend class CRangeMap< mapped_type, position_type >
friend

Definition at line 189 of file rangemap.hpp.

◆ CRangeMapBase< typename TTraits::TMapTraits >

template<class Traits >
friend class CRangeMapBase< typename TTraits::TMapTraits >
friend

Definition at line 189 of file rangemap.hpp.

◆ CRangeMultimap< mapped_type, position_type >

template<class Traits >
friend class CRangeMultimap< mapped_type, position_type >
friend

Definition at line 189 of file rangemap.hpp.

Modified on Tue May 28 05:52:48 2024 by modify_doxy.py rev. 669887