1 #ifndef PKG_ALIGNMENT___GROUP_ALIGNMENTS_TOOL_MANAGER__HPP
2 #define PKG_ALIGNMENT___GROUP_ALIGNMENTS_TOOL_MANAGER__HPP
CDataLoadingAppJob - a base class for Jobs loading data into projects.
CGroupAlignmentsParamsPanel.
IRegSettings An interface for objects that save / restore settings using CGuiRegistry.
Include a standard set of the NCBI C++ Toolkit most basic headers.
virtual IRegSettings * x_GetParamsAsRegSetting()
return a pointer to Parameters object as IRegSettings interface
virtual void x_InitProjectParams()
init m_ProjectParams, in particular can select target project based on the tool input
virtual bool x_ValidateParams()
validates user input in Parameters panel, report errors if any
virtual CDataLoadingAppJob * x_CreateLoadingJob()
factory method for creating the job that executes the tool algorithm override in derived classes
CGroupAlignmentsToolManager()
CGroupAlignmentsParamsPanel * m_ParamsPanel
virtual void x_CreateProjectItems()
override this function in derived classes and populate m_Items.
virtual void CleanUI()
override this function in a derived class and clean extra members
virtual void InitUI()
override this function in a derived class and initialize extra members
virtual string GetExtensionLabel() const
returns a displayable label for this extension ( please capitalize the key words - "My Extension" )
SGroupAlignmentsParams m_Params
void x_SelectCompatibleInputObjects()
select only Seq-aligns
TConstScopedObjects m_Alignments
SGroupAlignmentsParams m_Params
virtual string GetExtensionIdentifier() const
returns the unique human-readable identifier for the extension the id should use lowercase letters se...
CGroupAlignmentsJob(const SGroupAlignmentsParams ¶ms)
CGroupAlignmentsJob.
virtual CAlgoToolManagerParamsPanel * x_GetParamsPanel()
returns a pointer to the parameters panel, override in derived classes
virtual bool x_CreateParamsPanelIfNeeded()
returns / creates Parameters panel, override in derived classes see cpp file for example
vector< SConstScopedObject > TConstScopedObjects
#define END_NCBI_SCOPE
End previously defined NCBI scope.
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Defines to provide correct exporting from DLLs in Windows.