NCBI C++ ToolKit
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Classes | |
class | CBiostruc_Base |
A structure report or "biostruc" describes the components of a biomolecular assembly in terms of their names and descriptions, and a chemical graph giving atomic formula, connectivity and chirality. More... | |
class | CBiostruc_annot_set |
CBiostruc_annot_set –. More... | |
class | CBiostruc_annot_set_Base |
A biostruc annotation set is a means to collect ASN.1 data for biostruc features into one file. More... | |
class | CBiostruc_descr |
CBiostruc_descr –. More... | |
class | CBiostruc_descr_Base |
The description of a biostruc refers to both the reported chemical and spatial structure of a biomolecular assembly. More... | |
class | CBiostruc_history |
CBiostruc_history –. More... | |
class | CBiostruc_history_Base |
The history of a biostruc indicates it's origin and it's update history within MMDB, the NCBI-maintained molecular structure database. More... | |
class | CBiostruc_id |
CBiostruc_id –. More... | |
class | CBiostruc_id_Base |
A Biostruc-id is a collection identifiers for the molecular assembly. More... | |
class | CBiostruc_replace |
CBiostruc_replace –. More... | |
class | CBiostruc_replace_Base |
CBiostruc_replace_Base –. More... | |
class | CBiostruc_residue_graph_set |
CBiostruc_residue_graph_set –. More... | |
class | CBiostruc_residue_graph_set_Base |
A biostruc residue graph set is a collection of residue graphs. More... | |
class | CBiostruc_set |
CBiostruc_set –. More... | |
class | CBiostruc_set_Base |
A biostruc set is a means to collect ASN.1 data for many biostrucs in one file, as convenient for application programs. More... | |
class | CBiostruc_source |
CBiostruc_source –. More... | |
class | CBiostruc_source_Base |
The origin of a biostruc is a reference to another database. More... | |
class | CBiostruc_source_Base::C_Version_of_database |
C_Version_of_database –. More... | |
class | CMmdb_id |
CMmdb_id –. More... | |
class | CMmdb_id_Base |
CMmdb_id_Base –. More... | |
Definition at line 164 of file Biostruc_descr_.hpp.
typedef list< CRef< CBiostruc > > CBiostruc_set_Base::TBiostrucs |
Definition at line 96 of file Biostruc_set_.hpp.
Definition at line 107 of file Biostruc_.hpp.
Definition at line 90 of file Biostruc_history_.hpp.
Definition at line 250 of file Biostruc_source_.hpp.
typedef list< string > CBiostruc_source_Base::TDatabase_entry_history |
Definition at line 251 of file Biostruc_source_.hpp.
Definition at line 249 of file Biostruc_source_.hpp.
typedef CDate CBiostruc_replace_Base::TDate |
Definition at line 87 of file Biostruc_replace_.hpp.
typedef list< CRef< CBiostruc_descr > > CBiostruc_Base::TDescr |
Definition at line 106 of file Biostruc_.hpp.
typedef list< CRef< CBiostruc_descr > > CBiostruc_annot_set_Base::TDescr |
Definition at line 97 of file Biostruc_annot_set_.hpp.
typedef list< CRef< CBiomol_descr > > CBiostruc_residue_graph_set_Base::TDescr |
Definition at line 100 of file Biostruc_residue_graph_set_.hpp.
typedef list< CRef< CBiostruc_descr > > CBiostruc_set_Base::TDescr |
Definition at line 95 of file Biostruc_set_.hpp.
typedef list< CRef< CBiostruc_feature_set > > CBiostruc_Base::TFeatures |
Definition at line 108 of file Biostruc_.hpp.
typedef list< CRef< CBiostruc_feature_set > > CBiostruc_annot_set_Base::TFeatures |
Definition at line 98 of file Biostruc_annot_set_.hpp.
Definition at line 163 of file Biostruc_descr_.hpp.
typedef list< CRef< CBiostruc_id > > CBiostruc_Base::TId |
Definition at line 105 of file Biostruc_.hpp.
typedef list< CRef< CBiostruc_id > > CBiostruc_annot_set_Base::TId |
Definition at line 96 of file Biostruc_annot_set_.hpp.
Definition at line 86 of file Biostruc_replace_.hpp.
typedef list< CRef< CBiostruc_id > > CBiostruc_residue_graph_set_Base::TId |
Definition at line 99 of file Biostruc_residue_graph_set_.hpp.
typedef list< CRef< CBiostruc_id > > CBiostruc_set_Base::TId |
Definition at line 94 of file Biostruc_set_.hpp.
Definition at line 155 of file Biostruc_id_.hpp.
Definition at line 120 of file Biostruc_.hpp.
Definition at line 107 of file Biostruc_annot_set_.hpp.
Definition at line 99 of file Biostruc_history_.hpp.
Definition at line 95 of file Biostruc_replace_.hpp.
Definition at line 110 of file Biostruc_residue_graph_set_.hpp.
Definition at line 105 of file Biostruc_set_.hpp.
Definition at line 262 of file Biostruc_source_.hpp.
typedef CMmdb_id CBiostruc_id_Base::TMmdb_id |
Definition at line 153 of file Biostruc_id_.hpp.
typedef list< CRef< CBiostruc_model > > CBiostruc_Base::TModel |
Definition at line 109 of file Biostruc_.hpp.
typedef string CBiostruc_descr_Base::TName |
Definition at line 160 of file Biostruc_descr_.hpp.
Definition at line 247 of file Biostruc_source_.hpp.
Definition at line 162 of file Biostruc_descr_.hpp.
Definition at line 154 of file Biostruc_id_.hpp.
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Definition at line 94 of file Biostruc_.hpp.
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Definition at line 67 of file Biostruc_annot_set.hpp.
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Definition at line 85 of file Biostruc_annot_set_.hpp.
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Definition at line 67 of file Biostruc_descr.hpp.
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Definition at line 87 of file Biostruc_descr_.hpp.
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Definition at line 67 of file Biostruc_history.hpp.
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Definition at line 77 of file Biostruc_history_.hpp.
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Definition at line 67 of file Biostruc_id.hpp.
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Definition at line 82 of file Biostruc_id_.hpp.
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Definition at line 67 of file Biostruc_replace.hpp.
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Definition at line 75 of file Biostruc_replace_.hpp.
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Definition at line 67 of file Biostruc_residue_graph_set.hpp.
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Definition at line 88 of file Biostruc_residue_graph_set_.hpp.
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Definition at line 67 of file Biostruc_set.hpp.
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Definition at line 83 of file Biostruc_set_.hpp.
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Definition at line 67 of file Biostruc_source.hpp.
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Definition at line 83 of file Biostruc_source_.hpp.
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Definition at line 100 of file Biostruc_source_.hpp.
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Definition at line 67 of file Mmdb_id.hpp.
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Definition at line 70 of file Mmdb_id_.hpp.
Definition at line 161 of file Biostruc_descr_.hpp.
Definition at line 171 of file Biostruc_source_.hpp.
Definition at line 170 of file Biostruc_source_.hpp.
Definition at line 89 of file Biostruc_history_.hpp.
Definition at line 88 of file Biostruc_history_.hpp.
typedef list< CRef< CResidue_graph > > CBiostruc_residue_graph_set_Base::TResidue_graphs |
Definition at line 101 of file Biostruc_residue_graph_set_.hpp.
Definition at line 248 of file Biostruc_source_.hpp.
Choice variants.
Enumerator | |
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e_not_set | No variant selected. |
e_Name | |
e_Pdb_comment | |
e_Other_comment | |
e_History | |
e_Attribution |
Definition at line 99 of file Biostruc_descr_.hpp.
Choice variants.
Enumerator | |
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e_not_set | No variant selected. |
e_Mmdb_id | |
e_Other_database | |
e_Local_id |
Definition at line 94 of file Biostruc_id_.hpp.
Choice variants.
Enumerator | |
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e_not_set | No variant selected. |
e_Release_date | |
e_Release_code |
Definition at line 112 of file Biostruc_source_.hpp.
Maximum+1 value of the choice variant enumerator.
Enumerator | |
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e_MaxChoice | == e_Attribution+1 |
Definition at line 108 of file Biostruc_descr_.hpp.
Maximum+1 value of the choice variant enumerator.
Enumerator | |
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e_MaxChoice | == e_Local_id+1 |
Definition at line 101 of file Biostruc_id_.hpp.
Maximum+1 value of the choice variant enumerator.
Enumerator | |
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e_MaxChoice | == e_Release_code+1 |
Definition at line 118 of file Biostruc_source_.hpp.
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Enumerator | |
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e__allMandatory | |
e_id | |
e_descr | |
e_chemical_graph | |
e_features | |
e_model |
Definition at line 112 of file Biostruc_.hpp.
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Enumerator | |
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e__allMandatory | |
e_id | |
e_descr | |
e_features |
Definition at line 101 of file Biostruc_annot_set_.hpp.
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Enumerator | |
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e__allMandatory | |
e_replaces | |
e_replaced_by | |
e_data_source |
Definition at line 93 of file Biostruc_history_.hpp.
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Enumerator | |
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e__allMandatory | |
e_id | |
e_date |
Definition at line 90 of file Biostruc_replace_.hpp.
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Enumerator | |
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e__allMandatory | |
e_id | |
e_descr | |
e_residue_graphs |
Definition at line 104 of file Biostruc_residue_graph_set_.hpp.
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Enumerator | |
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e__allMandatory | |
e_id | |
e_descr | |
e_biostrucs |
Definition at line 99 of file Biostruc_set_.hpp.
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Enumerator | |
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e__allMandatory | |
e_name_of_database | |
e_version_of_database | |
e_database_entry_id | |
e_database_entry_date | |
e_database_entry_history |
Definition at line 254 of file Biostruc_source_.hpp.
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END_CHOICE_INFO CBiostruc_source_Base::C_Version_of_database::C_Version_of_database | ( | void | ) |
Definition at line 147 of file Biostruc_source_.cpp.
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Check if it is safe to call GetBiostrucs method.
Definition at line 285 of file Biostruc_set_.hpp.
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Check if it is safe to call GetChemical_graph method.
Definition at line 370 of file Biostruc_.hpp.
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Check if it is safe to call GetData_source method.
Definition at line 289 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::IsSetData_source().
Referenced by CBiostruc_history_Base::GetData_source().
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Check if it is safe to call GetDatabase_entry_date method.
Definition at line 634 of file Biostruc_source_.hpp.
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Check if it is safe to call GetDatabase_entry_history method.
Definition at line 664 of file Biostruc_source_.hpp.
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Check if it is safe to call GetDatabase_entry_id method.
Definition at line 604 of file Biostruc_source_.hpp.
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Check if it is safe to call GetDate method.
Definition at line 235 of file Biostruc_replace_.hpp.
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Check if it is safe to call GetDescr method.
Definition at line 345 of file Biostruc_.hpp.
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Check if it is safe to call GetDescr method.
Definition at line 262 of file Biostruc_annot_set_.hpp.
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Check if it is safe to call GetDescr method.
Definition at line 265 of file Biostruc_residue_graph_set_.hpp.
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Check if it is safe to call GetDescr method.
Definition at line 260 of file Biostruc_set_.hpp.
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Check if it is safe to call GetFeatures method.
Definition at line 400 of file Biostruc_.hpp.
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Check if it is safe to call GetFeatures method.
Definition at line 287 of file Biostruc_annot_set_.hpp.
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Check if it is safe to call GetId method.
Definition at line 320 of file Biostruc_.hpp.
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Check if it is safe to call GetId method.
Definition at line 237 of file Biostruc_annot_set_.hpp.
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Check if it is safe to call GetId method.
Definition at line 205 of file Biostruc_replace_.hpp.
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Check if it is safe to call GetId method.
Definition at line 240 of file Biostruc_residue_graph_set_.hpp.
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Check if it is safe to call GetId method.
Definition at line 235 of file Biostruc_set_.hpp.
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Check if it is safe to call GetModel method.
Definition at line 425 of file Biostruc_.hpp.
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Check if it is safe to call GetName_of_database method.
Definition at line 536 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::IsSetName_of_database().
Referenced by CBiostruc_source_Base::GetName_of_database().
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Check if it is safe to call GetReplaced_by method.
Definition at line 268 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::IsSetReplaced_by().
Referenced by CBiostruc_history_Base::GetReplaced_by().
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Check if it is safe to call GetReplaces method.
Definition at line 247 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::IsSetReplaces().
Referenced by CBiostruc_history_Base::GetReplaces().
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Check if it is safe to call GetResidue_graphs method.
Definition at line 290 of file Biostruc_residue_graph_set_.hpp.
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Check if it is safe to call GetVersion_of_database method.
Definition at line 583 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::IsSetVersion_of_database().
Referenced by CBiostruc_source_Base::GetVersion_of_database().
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Definition at line 86 of file Biostruc_annot_set.hpp.
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END_CLASS_INFO CBiostruc_annot_set_Base::CBiostruc_annot_set_Base | ( | void | ) |
Definition at line 91 of file Biostruc_annot_set_.cpp.
References CBiostruc_annot_set_Base::m_set_State.
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END_CLASS_INFO CBiostruc_Base::CBiostruc_Base | ( | void | ) |
Definition at line 117 of file Biostruc_.cpp.
References CObject::IsAllocatedInPool(), CBiostruc_Base::m_set_State, and CBiostruc_Base::ResetChemical_graph().
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Definition at line 86 of file Biostruc_descr.hpp.
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END_CHOICE_INFO CBiostruc_descr_Base::CBiostruc_descr_Base | ( | void | ) |
Definition at line 194 of file Biostruc_descr_.cpp.
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Definition at line 86 of file Biostruc_history.hpp.
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END_CLASS_INFO CBiostruc_history_Base::CBiostruc_history_Base | ( | void | ) |
Definition at line 123 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_set_State.
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Definition at line 86 of file Biostruc_id.hpp.
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END_CHOICE_INFO CBiostruc_id_Base::CBiostruc_id_Base | ( | void | ) |
Definition at line 174 of file Biostruc_id_.cpp.
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Definition at line 86 of file Biostruc_replace.hpp.
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END_CLASS_INFO CBiostruc_replace_Base::CBiostruc_replace_Base | ( | void | ) |
Definition at line 98 of file Biostruc_replace_.cpp.
References CObject::IsAllocatedInPool(), CBiostruc_replace_Base::m_set_State, CBiostruc_replace_Base::ResetDate(), and CBiostruc_replace_Base::ResetId().
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Definition at line 86 of file Biostruc_residue_graph_set.hpp.
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END_CLASS_INFO CBiostruc_residue_graph_set_Base::CBiostruc_residue_graph_set_Base | ( | void | ) |
Definition at line 91 of file Biostruc_residue_graph_set_.cpp.
References CBiostruc_residue_graph_set_Base::m_set_State.
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Definition at line 86 of file Biostruc_set.hpp.
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END_CLASS_INFO CBiostruc_set_Base::CBiostruc_set_Base | ( | void | ) |
Definition at line 91 of file Biostruc_set_.cpp.
References CBiostruc_set_Base::m_set_State.
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Definition at line 86 of file Biostruc_source.hpp.
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END_CLASS_INFO CBiostruc_source_Base::CBiostruc_source_Base | ( | void | ) |
Definition at line 240 of file Biostruc_source_.cpp.
References CObject::IsAllocatedInPool(), CBiostruc_source_Base::m_set_State, CBiostruc_source_Base::ResetDatabase_entry_date(), and CBiostruc_source_Base::ResetDatabase_entry_id().
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Verify selection, throw exception if it differs from the expected.
index | Expected selection. |
Definition at line 336 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::m_choice, and CBiostruc_descr_Base::ThrowInvalidSelection().
Referenced by CBiostruc_descr_Base::GetAttribution(), CBiostruc_descr_Base::GetHistory(), CBiostruc_descr_Base::GetName(), CBiostruc_descr_Base::GetOther_comment(), and CBiostruc_descr_Base::GetPdb_comment().
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Verify selection, throw exception if it differs from the expected.
index | Expected selection. |
Definition at line 273 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::m_choice, and CBiostruc_id_Base::ThrowInvalidSelection().
Referenced by CBiostruc_id_Base::GetLocal_id(), CBiostruc_id_Base::GetMmdb_id(), and CBiostruc_id_Base::GetOther_database().
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Verify selection, throw exception if it differs from the expected.
index | Expected selection. |
Definition at line 481 of file Biostruc_source_.hpp.
Explicit constructor from the primitive type.
Definition at line 72 of file Mmdb_id.hpp.
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Definition at line 69 of file Mmdb_id.hpp.
Definition at line 96 of file Mmdb_id_.hpp.
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Definition at line 91 of file Mmdb_id_.hpp.
CBiostruc_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_annot_set_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_descr_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_history_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_id_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_replace_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_residue_graph_set_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_set_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_source_Base::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CBiostruc_source_Base::C_Version_of_database::DECLARE_INTERNAL_TYPE_INFO | ( | ) |
CMmdb_id_Base::DECLARE_STD_ALIAS_TYPE_INFO | ( | ) |
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Definition at line 76 of file Biostruc_descr_.cpp.
References CObject::AddReference(), CBiostruc_descr_Base::e_Attribution, CBiostruc_descr_Base::e_History, CBiostruc_descr_Base::e_Name, CBiostruc_descr_Base::e_Other_comment, CBiostruc_descr_Base::e_Pdb_comment, CBiostruc_descr_Base::m_choice, CBiostruc_descr_Base::m_object, and CBiostruc_descr_Base::m_string.
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Definition at line 74 of file Biostruc_id_.cpp.
References CObject::AddReference(), CBiostruc_id_Base::e_Local_id, CBiostruc_id_Base::e_Mmdb_id, CBiostruc_id_Base::e_Other_database, CBiostruc_id_Base::m_choice, CBiostruc_id_Base::m_Mmdb_id, and CBiostruc_id_Base::m_object.
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Definition at line 73 of file Biostruc_source_.cpp.
References CObject::AddReference().
const CBiostruc_descr_Base::TAttribution & CBiostruc_descr_Base::GetAttribution | ( | void | ) | const |
Get the variant data.
Definition at line 155 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::e_Attribution, and CBiostruc_descr_Base::m_object.
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Get the Biostrucs member data.
Definition at line 291 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Biostrucs.
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Get the Chemical_graph member data.
Definition at line 376 of file Biostruc_.hpp.
References CBiostruc_Base::m_Chemical_graph, and CBiostruc_Base::ResetChemical_graph().
Referenced by CreateMimeFromBiostruc(), UpdateViewer::ImportStructure(), and StructureObject::StructureObject().
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Get the Data_source member data.
Definition at line 295 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::CanGetData_source(), CBiostruc_history_Base::m_Data_source, and CSerialObject::ThrowUnassigned().
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Get the Database_entry_date member data.
Definition at line 640 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_date, and CBiostruc_source_Base::ResetDatabase_entry_date().
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Get the Database_entry_history member data.
Definition at line 670 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_history.
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Get the Database_entry_id member data.
Definition at line 610 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_id, and CBiostruc_source_Base::ResetDatabase_entry_id().
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Get the Date member data.
Definition at line 241 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Date, and CBiostruc_replace_Base::ResetDate().
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Get the Descr member data.
Definition at line 351 of file Biostruc_.hpp.
References CBiostruc_Base::m_Descr.
Referenced by UpdateViewer::ImportStructure(), and StructureObject::StructureObject().
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Get the Descr member data.
Definition at line 268 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Descr.
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Get the Descr member data.
Definition at line 271 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Descr.
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Get the Descr member data.
Definition at line 266 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Descr.
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Get the Features member data.
Definition at line 406 of file Biostruc_.hpp.
References CBiostruc_Base::m_Features.
Referenced by StructureObject::StructureObject().
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Get the Features member data.
Definition at line 293 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Features.
Referenced by StructureSet::AddStructureAlignment(), UpdateViewer::GetVASTAlignments(), HighlightResidues(), ReorderStructureAlignments(), StructureObject::SetTransformToMaster(), and CDDAnnotateDialog::ShowEvidence().
const CBiostruc_descr_Base::THistory & CBiostruc_descr_Base::GetHistory | ( | void | ) | const |
Get the variant data.
Definition at line 133 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::e_History, and CBiostruc_descr_Base::m_object.
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Get the Id member data.
Definition at line 326 of file Biostruc_.hpp.
References CBiostruc_Base::m_Id.
Referenced by UpdateViewer::ImportStructure(), and StructureObject::StructureObject().
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Get the Id member data.
Definition at line 243 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Id.
Referenced by UpdateViewer::GetVASTAlignments(), and HighlightResidues().
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Get the Id member data.
Definition at line 211 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Id, and CBiostruc_replace_Base::ResetId().
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Get the Id member data.
Definition at line 246 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Id.
Referenced by LoadStandardDictionary().
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Get the Id member data.
Definition at line 241 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Id.
const CBiostruc_id_Base::TLocal_id & CBiostruc_id_Base::GetLocal_id | ( | void | ) | const |
Get the variant data.
Definition at line 137 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::CheckSelected(), CBiostruc_id_Base::e_Local_id, and CBiostruc_id_Base::m_object.
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Get the variant data.
Definition at line 302 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::CheckSelected(), CBiostruc_id_Base::e_Mmdb_id, and CBiostruc_id_Base::m_Mmdb_id.
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Get the Model member data.
Definition at line 431 of file Biostruc_.hpp.
References CBiostruc_Base::m_Model.
Referenced by CreateMimeFromBiostruc(), UpdateViewer::ImportStructure(), and StructureObject::StructureObject().
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Get the variant data.
Definition at line 365 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::e_Name, and CBiostruc_descr_Base::m_string.
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Get the Name_of_database member data.
Definition at line 542 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::CanGetName_of_database(), CBiostruc_source_Base::m_Name_of_database, and CSerialObject::ThrowUnassigned().
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Get the variant data.
Definition at line 405 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::e_Other_comment, and CBiostruc_descr_Base::m_string.
const CBiostruc_id_Base::TOther_database & CBiostruc_id_Base::GetOther_database | ( | void | ) | const |
Get the variant data.
Definition at line 115 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::CheckSelected(), CBiostruc_id_Base::e_Other_database, and CBiostruc_id_Base::m_object.
Referenced by Residue::Residue().
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Get the variant data.
Definition at line 385 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::e_Pdb_comment, and CBiostruc_descr_Base::m_string.
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Get the variant data.
Definition at line 516 of file Biostruc_source_.hpp.
const CBiostruc_source_Base::C_Version_of_database::TRelease_date & CBiostruc_source_Base::C_Version_of_database::GetRelease_date | ( | void | ) | const |
Get the variant data.
Definition at line 104 of file Biostruc_source_.cpp.
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Get the Replaced_by member data.
Definition at line 274 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::CanGetReplaced_by(), CBiostruc_history_Base::m_Replaced_by, and CSerialObject::ThrowUnassigned().
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Get the Replaces member data.
Definition at line 253 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::CanGetReplaces(), CBiostruc_history_Base::m_Replaces, and CSerialObject::ThrowUnassigned().
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Get the Residue_graphs member data.
Definition at line 296 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Residue_graphs.
Referenced by ChemicalGraph::ChemicalGraph().
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Get the Version_of_database member data.
Definition at line 589 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::CanGetVersion_of_database(), CBiostruc_source_Base::m_Version_of_database, and CSerialObject::ThrowUnassigned().
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Check if variant Attribution is selected.
Attribution type is defined as 'typedef CPub TAttribution'.
Definition at line 425 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Attribution, and CBiostruc_descr_Base::m_choice.
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Check if variant History is selected.
History type is defined as 'typedef CBiostruc_history THistory'.
Definition at line 419 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_History, and CBiostruc_descr_Base::m_choice.
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Check if variant Local_id is selected.
Local_id type is defined as 'typedef CObject_id TLocal_id'.
Definition at line 322 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::e_Local_id, and CBiostruc_id_Base::m_choice.
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Check if variant Mmdb_id is selected.
Mmdb_id type is defined as 'typedef CMmdb_id TMmdb_id'.
Definition at line 296 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::e_Mmdb_id, and CBiostruc_id_Base::m_choice.
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Check if variant Name is selected.
Name type is defined as 'typedef string TName'.
Definition at line 359 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Name, and CBiostruc_descr_Base::m_choice.
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Check if variant Other_comment is selected.
Other_comment type is defined as 'typedef string TOther_comment'.
Definition at line 399 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Other_comment, and CBiostruc_descr_Base::m_choice.
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Check if variant Other_database is selected.
Other_database type is defined as 'typedef CDbtag TOther_database'.
Definition at line 316 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::e_Other_database, and CBiostruc_id_Base::m_choice.
Referenced by Residue::Residue().
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Check if variant Pdb_comment is selected.
Pdb_comment type is defined as 'typedef string TPdb_comment'.
Definition at line 379 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Pdb_comment, and CBiostruc_descr_Base::m_choice.
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Check if variant Release_code is selected.
Release_code type is defined as 'typedef string TRelease_code'.
Definition at line 510 of file Biostruc_source_.hpp.
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Check if variant Release_date is selected.
Release_date type is defined as 'typedef CDate TRelease_date'.
Definition at line 504 of file Biostruc_source_.hpp.
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Check if a value has been assigned to Biostrucs data member.
Data member Biostrucs is mandatory; its type is defined as 'typedef list< CRef< CBiostruc > > TBiostrucs'
Definition at line 279 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_set_State.
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Check if a value has been assigned to Chemical_graph data member.
Data member Chemical_graph is mandatory; its type is defined as 'typedef CBiostruc_graph TChemical_graph'
Definition at line 364 of file Biostruc_.hpp.
References CBiostruc_Base::m_Chemical_graph.
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Check if a value has been assigned to Data_source data member.
Data member Data_source is optional; its type is defined as 'typedef CBiostruc_source TData_source'
Definition at line 283 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::m_Data_source.
Referenced by CBiostruc_history_Base::CanGetData_source().
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Check if a value has been assigned to Database_entry_date data member.
Data member Database_entry_date is mandatory; its type is defined as 'typedef CDate TDatabase_entry_date'
Definition at line 628 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_date.
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Check if a value has been assigned to Database_entry_history data member.
Data member Database_entry_history is optional; its type is defined as 'typedef list< string > TDatabase_entry_history'
Definition at line 658 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_set_State.
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Check if a value has been assigned to Database_entry_id data member.
Data member Database_entry_id is mandatory; its type is defined as 'typedef CBiostruc_id TDatabase_entry_id'
Definition at line 598 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_id.
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Check if a value has been assigned to Date data member.
Data member Date is mandatory; its type is defined as 'typedef CDate TDate'
Definition at line 229 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Date.
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Check if a value has been assigned to Descr data member.
Data member Descr is optional; its type is defined as 'typedef list< CRef< CBiostruc_descr > > TDescr'
Definition at line 339 of file Biostruc_.hpp.
References CBiostruc_Base::m_set_State.
Referenced by StructureObject::StructureObject().
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Check if a value has been assigned to Descr data member.
Data member Descr is optional; its type is defined as 'typedef list< CRef< CBiostruc_descr > > TDescr'
Definition at line 256 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_set_State.
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Check if a value has been assigned to Descr data member.
Data member Descr is optional; its type is defined as 'typedef list< CRef< CBiomol_descr > > TDescr'
Definition at line 259 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_set_State.
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Check if a value has been assigned to Descr data member.
Data member Descr is optional; its type is defined as 'typedef list< CRef< CBiostruc_descr > > TDescr'
Definition at line 254 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_set_State.
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Check if a value has been assigned to Features data member.
Data member Features is optional; its type is defined as 'typedef list< CRef< CBiostruc_feature_set > > TFeatures'
Definition at line 394 of file Biostruc_.hpp.
References CBiostruc_Base::m_set_State.
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Check if a value has been assigned to Features data member.
Data member Features is mandatory; its type is defined as 'typedef list< CRef< CBiostruc_feature_set > > TFeatures'
Definition at line 281 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_set_State.
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Check if a value has been assigned to Id data member.
Data member Id is mandatory; its type is defined as 'typedef list< CRef< CBiostruc_id > > TId'
Definition at line 314 of file Biostruc_.hpp.
References CBiostruc_Base::m_set_State.
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Check if a value has been assigned to Id data member.
Data member Id is optional; its type is defined as 'typedef list< CRef< CBiostruc_id > > TId'
Definition at line 231 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_set_State.
Referenced by UpdateViewer::GetVASTAlignments(), and HighlightResidues().
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Check if a value has been assigned to Id data member.
Data member Id is mandatory; its type is defined as 'typedef CBiostruc_id TId'
Definition at line 199 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Id.
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Check if a value has been assigned to Id data member.
Data member Id is optional; its type is defined as 'typedef list< CRef< CBiostruc_id > > TId'
Definition at line 234 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_set_State.
Referenced by LoadStandardDictionary().
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Check if a value has been assigned to Id data member.
Data member Id is optional; its type is defined as 'typedef list< CRef< CBiostruc_id > > TId'
Definition at line 229 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_set_State.
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Check if a value has been assigned to Model data member.
Data member Model is optional; its type is defined as 'typedef list< CRef< CBiostruc_model > > TModel'
Definition at line 419 of file Biostruc_.hpp.
References CBiostruc_Base::m_set_State.
Referenced by StructureObject::StructureObject().
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Check if a value has been assigned to Name_of_database data member.
Data member Name_of_database is mandatory; its type is defined as 'typedef string TName_of_database'
Definition at line 530 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_set_State.
Referenced by CBiostruc_source_Base::CanGetName_of_database(), and CBiostruc_source_Base::SetName_of_database().
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Check if a value has been assigned to Replaced_by data member.
Data member Replaced_by is optional; its type is defined as 'typedef CBiostruc_replace TReplaced_by'
Definition at line 262 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::m_Replaced_by.
Referenced by CBiostruc_history_Base::CanGetReplaced_by().
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Check if a value has been assigned to Replaces data member.
Data member Replaces is optional; its type is defined as 'typedef CBiostruc_replace TReplaces'
Definition at line 241 of file Biostruc_history_.hpp.
References CBiostruc_history_Base::m_Replaces.
Referenced by CBiostruc_history_Base::CanGetReplaces().
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Check if a value has been assigned to Residue_graphs data member.
Data member Residue_graphs is mandatory; its type is defined as 'typedef list< CRef< CResidue_graph > > TResidue_graphs'
Definition at line 284 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_set_State.
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Check if a value has been assigned to Version_of_database data member.
Data member Version_of_database is optional; its type is defined as 'typedef C_Version_of_database TVersion_of_database'
Definition at line 577 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Version_of_database.
Referenced by CBiostruc_source_Base::CanGetVersion_of_database().
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Definition at line 102 of file Mmdb_id_.hpp.
References str(), and WriteObject().
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Definition at line 113 of file Mmdb_id_.hpp.
References ReadObject(), and str().
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Reset the whole object.
Definition at line 93 of file Biostruc_.cpp.
References CBiostruc_Base::ResetChemical_graph(), CBiostruc_Base::ResetDescr(), CBiostruc_Base::ResetFeatures(), CBiostruc_Base::ResetId(), and CBiostruc_Base::ResetModel().
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Reset the whole object.
Definition at line 71 of file Biostruc_annot_set_.cpp.
References CBiostruc_annot_set_Base::ResetDescr(), CBiostruc_annot_set_Base::ResetFeatures(), and CBiostruc_annot_set_Base::ResetId().
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Reset the whole object.
Definition at line 52 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_not_set, CBiostruc_descr_Base::m_choice, and CBiostruc_descr_Base::ResetSelection().
Referenced by CBiostruc_descr_Base::~CBiostruc_descr_Base().
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Reset the whole object.
Definition at line 103 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::ResetData_source(), CBiostruc_history_Base::ResetReplaced_by(), and CBiostruc_history_Base::ResetReplaces().
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Reset the whole object.
Definition at line 52 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::e_not_set, CBiostruc_id_Base::m_choice, and CBiostruc_id_Base::ResetSelection().
Referenced by CBiostruc_id_Base::~CBiostruc_id_Base().
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Reset the whole object.
Definition at line 80 of file Biostruc_replace_.cpp.
References CBiostruc_replace_Base::ResetDate(), and CBiostruc_replace_Base::ResetId().
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Reset the whole object.
Definition at line 71 of file Biostruc_residue_graph_set_.cpp.
References CBiostruc_residue_graph_set_Base::ResetDescr(), CBiostruc_residue_graph_set_Base::ResetId(), and CBiostruc_residue_graph_set_Base::ResetResidue_graphs().
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Reset the whole object.
Definition at line 71 of file Biostruc_set_.cpp.
References CBiostruc_set_Base::ResetBiostrucs(), CBiostruc_set_Base::ResetDescr(), and CBiostruc_set_Base::ResetId().
void CBiostruc_source_Base::C_Version_of_database::Reset | ( | void | ) |
Reset the whole object.
Definition at line 52 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::C_Version_of_database::e_not_set, CBiostruc_source_Base::C_Version_of_database::m_choice, and CBiostruc_source_Base::C_Version_of_database::ResetSelection().
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Reset the whole object.
Definition at line 216 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::ResetDatabase_entry_date(), CBiostruc_source_Base::ResetDatabase_entry_history(), CBiostruc_source_Base::ResetDatabase_entry_id(), CBiostruc_source_Base::ResetName_of_database(), and CBiostruc_source_Base::ResetVersion_of_database().
Referenced by CBiostruc_source_Base::C_Version_of_database::~C_Version_of_database().
void CBiostruc_set_Base::ResetBiostrucs | ( | void | ) |
Reset Biostrucs data member.
Definition at line 65 of file Biostruc_set_.cpp.
References CBiostruc_set_Base::m_Biostrucs, and CBiostruc_set_Base::m_set_State.
Referenced by CBiostruc_set_Base::Reset().
void CBiostruc_Base::ResetChemical_graph | ( | void | ) |
Reset Chemical_graph data member.
Definition at line 67 of file Biostruc_.cpp.
References CBiostruc_Base::m_Chemical_graph.
Referenced by CBiostruc_Base::CBiostruc_Base(), CBiostruc_Base::GetChemical_graph(), CBiostruc_Base::Reset(), and CBiostruc_Base::SetChemical_graph().
void CBiostruc_history_Base::ResetData_source | ( | void | ) |
Reset Data_source data member.
Definition at line 86 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Data_source.
Referenced by CBiostruc_history_Base::Reset().
void CBiostruc_source_Base::ResetDatabase_entry_date | ( | void | ) |
Reset Database_entry_date data member.
Definition at line 196 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Database_entry_date.
Referenced by CBiostruc_source_Base::CBiostruc_source_Base(), CBiostruc_source_Base::GetDatabase_entry_date(), CBiostruc_source_Base::Reset(), and CBiostruc_source_Base::SetDatabase_entry_date().
void CBiostruc_source_Base::ResetDatabase_entry_history | ( | void | ) |
Reset Database_entry_history data member.
Definition at line 210 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Database_entry_history, and CBiostruc_source_Base::m_set_State.
Referenced by CBiostruc_source_Base::Reset().
void CBiostruc_source_Base::ResetDatabase_entry_id | ( | void | ) |
Reset Database_entry_id data member.
Definition at line 182 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Database_entry_id.
Referenced by CBiostruc_source_Base::CBiostruc_source_Base(), CBiostruc_source_Base::GetDatabase_entry_id(), CBiostruc_source_Base::Reset(), and CBiostruc_source_Base::SetDatabase_entry_id().
void CBiostruc_replace_Base::ResetDate | ( | void | ) |
Reset Date data member.
Definition at line 66 of file Biostruc_replace_.cpp.
References CBiostruc_replace_Base::m_Date.
Referenced by CBiostruc_replace_Base::CBiostruc_replace_Base(), CBiostruc_replace_Base::GetDate(), CBiostruc_replace_Base::Reset(), and CBiostruc_replace_Base::SetDate().
void CBiostruc_Base::ResetDescr | ( | void | ) |
Reset Descr data member.
Definition at line 61 of file Biostruc_.cpp.
References CBiostruc_Base::m_Descr, and CBiostruc_Base::m_set_State.
Referenced by CBiostruc_Base::Reset().
void CBiostruc_annot_set_Base::ResetDescr | ( | void | ) |
Reset Descr data member.
Definition at line 59 of file Biostruc_annot_set_.cpp.
References CBiostruc_annot_set_Base::m_Descr, and CBiostruc_annot_set_Base::m_set_State.
Referenced by CBiostruc_annot_set_Base::Reset().
void CBiostruc_residue_graph_set_Base::ResetDescr | ( | void | ) |
Reset Descr data member.
Definition at line 59 of file Biostruc_residue_graph_set_.cpp.
References CBiostruc_residue_graph_set_Base::m_Descr, and CBiostruc_residue_graph_set_Base::m_set_State.
Referenced by CBiostruc_residue_graph_set_Base::Reset().
void CBiostruc_set_Base::ResetDescr | ( | void | ) |
Reset Descr data member.
Definition at line 59 of file Biostruc_set_.cpp.
References CBiostruc_set_Base::m_Descr, and CBiostruc_set_Base::m_set_State.
Referenced by CBiostruc_set_Base::Reset().
void CBiostruc_Base::ResetFeatures | ( | void | ) |
Reset Features data member.
Definition at line 81 of file Biostruc_.cpp.
References CBiostruc_Base::m_Features, and CBiostruc_Base::m_set_State.
Referenced by CBiostruc_Base::Reset().
void CBiostruc_annot_set_Base::ResetFeatures | ( | void | ) |
Reset Features data member.
Definition at line 65 of file Biostruc_annot_set_.cpp.
References CBiostruc_annot_set_Base::m_Features, and CBiostruc_annot_set_Base::m_set_State.
Referenced by CBiostruc_annot_set_Base::Reset().
void CBiostruc_Base::ResetId | ( | void | ) |
Reset Id data member.
Definition at line 55 of file Biostruc_.cpp.
References CBiostruc_Base::m_Id, and CBiostruc_Base::m_set_State.
Referenced by CBiostruc_Base::Reset().
void CBiostruc_annot_set_Base::ResetId | ( | void | ) |
Reset Id data member.
Definition at line 53 of file Biostruc_annot_set_.cpp.
References CBiostruc_annot_set_Base::m_Id, and CBiostruc_annot_set_Base::m_set_State.
Referenced by CBiostruc_annot_set_Base::Reset().
void CBiostruc_replace_Base::ResetId | ( | void | ) |
Reset Id data member.
Definition at line 52 of file Biostruc_replace_.cpp.
References CBiostruc_replace_Base::m_Id.
Referenced by CBiostruc_replace_Base::CBiostruc_replace_Base(), CBiostruc_replace_Base::GetId(), CBiostruc_replace_Base::Reset(), and CBiostruc_replace_Base::SetId().
void CBiostruc_residue_graph_set_Base::ResetId | ( | void | ) |
Reset Id data member.
Definition at line 53 of file Biostruc_residue_graph_set_.cpp.
References CBiostruc_residue_graph_set_Base::m_Id, and CBiostruc_residue_graph_set_Base::m_set_State.
Referenced by CBiostruc_residue_graph_set_Base::Reset().
void CBiostruc_set_Base::ResetId | ( | void | ) |
Reset Id data member.
Definition at line 53 of file Biostruc_set_.cpp.
References CBiostruc_set_Base::m_Id, and CBiostruc_set_Base::m_set_State.
Referenced by CBiostruc_set_Base::Reset().
void CBiostruc_Base::ResetModel | ( | void | ) |
Reset Model data member.
Definition at line 87 of file Biostruc_.cpp.
References CBiostruc_Base::m_Model, and CBiostruc_Base::m_set_State.
Referenced by CreateMimeFromBiostruc(), and CBiostruc_Base::Reset().
void CBiostruc_source_Base::ResetName_of_database | ( | void | ) |
Reset Name_of_database data member.
Definition at line 159 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Name_of_database, and CBiostruc_source_Base::m_set_State.
Referenced by CBiostruc_source_Base::Reset().
void CBiostruc_history_Base::ResetReplaced_by | ( | void | ) |
Reset Replaced_by data member.
Definition at line 69 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaced_by.
Referenced by CBiostruc_history_Base::Reset().
void CBiostruc_history_Base::ResetReplaces | ( | void | ) |
Reset Replaces data member.
Definition at line 52 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaces.
Referenced by CBiostruc_history_Base::Reset().
void CBiostruc_residue_graph_set_Base::ResetResidue_graphs | ( | void | ) |
Reset Residue_graphs data member.
Definition at line 65 of file Biostruc_residue_graph_set_.cpp.
References CBiostruc_residue_graph_set_Base::m_Residue_graphs, and CBiostruc_residue_graph_set_Base::m_set_State.
Referenced by CBiostruc_residue_graph_set_Base::Reset().
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Reset the selection (set it to e_not_set).
Definition at line 58 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_Attribution, CBiostruc_descr_Base::e_History, CBiostruc_descr_Base::e_Name, CBiostruc_descr_Base::e_not_set, CBiostruc_descr_Base::e_Other_comment, CBiostruc_descr_Base::e_Pdb_comment, CBiostruc_descr_Base::m_choice, CBiostruc_descr_Base::m_object, and CBiostruc_descr_Base::m_string.
Referenced by CBiostruc_descr_Base::Reset(), CBiostruc_descr_Base::SetAttribution(), and CBiostruc_descr_Base::SetHistory().
|
virtual |
Reset the selection (set it to e_not_set).
Definition at line 58 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::e_Local_id, CBiostruc_id_Base::e_Mmdb_id, CBiostruc_id_Base::e_not_set, CBiostruc_id_Base::e_Other_database, CBiostruc_id_Base::m_choice, CBiostruc_id_Base::m_Mmdb_id, and CBiostruc_id_Base::m_object.
Referenced by CBiostruc_id_Base::Reset(), CBiostruc_id_Base::SetLocal_id(), and CBiostruc_id_Base::SetOther_database().
void CBiostruc_source_Base::C_Version_of_database::ResetSelection | ( | void | ) |
Reset the selection (set it to e_not_set).
Definition at line 58 of file Biostruc_source_.cpp.
References e_not_set.
Referenced by CBiostruc_source_Base::C_Version_of_database::Reset().
void CBiostruc_source_Base::ResetVersion_of_database | ( | void | ) |
Reset Version_of_database data member.
Definition at line 165 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Version_of_database.
Referenced by CBiostruc_source_Base::Reset().
void CBiostruc_descr_Base::Select | ( | E_Choice | index, |
EResetVariant | reset, | ||
CObjectMemoryPool * | pool | ||
) |
Select the requested variant if needed, allocating CObject variants from memory pool.
void CBiostruc_id_Base::Select | ( | E_Choice | index, |
EResetVariant | reset, | ||
CObjectMemoryPool * | pool | ||
) |
Select the requested variant if needed, allocating CObject variants from memory pool.
void CBiostruc_source_Base::C_Version_of_database::Select | ( | E_Choice | index, |
EResetVariant | reset, | ||
CObjectMemoryPool * | pool | ||
) |
Select the requested variant if needed, allocating CObject variants from memory pool.
void CBiostruc_descr_Base::Select | ( | E_Choice | index, |
EResetVariant | reset = eDoResetVariant |
||
) |
Select the requested variant if needed.
index | New selection state. |
reset | Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant. |
Referenced by CBiostruc_descr_Base::SetAttribution(), CBiostruc_descr_Base::SetHistory(), CBiostruc_descr_Base::SetName(), CBiostruc_descr_Base::SetOther_comment(), and CBiostruc_descr_Base::SetPdb_comment().
void CBiostruc_id_Base::Select | ( | E_Choice | index, |
EResetVariant | reset = eDoResetVariant |
||
) |
Select the requested variant if needed.
index | New selection state. |
reset | Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant. |
Referenced by CBiostruc_id_Base::SetLocal_id(), CBiostruc_id_Base::SetMmdb_id(), and CBiostruc_id_Base::SetOther_database().
void CBiostruc_source_Base::C_Version_of_database::Select | ( | E_Choice | index, |
EResetVariant | reset = eDoResetVariant |
||
) |
Select the requested variant if needed.
index | New selection state. |
reset | Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant. |
|
static |
Retrieve selection name (for diagnostic purposes).
index | One of possible selection states. |
Definition at line 105 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::sm_SelectionNames.
|
static |
Retrieve selection name (for diagnostic purposes).
index | One of possible selection states. |
Definition at line 99 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::sm_SelectionNames.
|
static |
Retrieve selection name (for diagnostic purposes).
index | One of possible selection states. |
Definition at line 94 of file Biostruc_source_.cpp.
void CBiostruc_descr_Base::SetAttribution | ( | CBiostruc_descr_Base::TAttribution & | value | ) |
Select the variant and set its data.
value | Reference to the data. |
Definition at line 167 of file Biostruc_descr_.cpp.
References CObject::AddReference(), CBiostruc_descr_Base::e_Attribution, CBiostruc_descr_Base::m_choice, CBiostruc_descr_Base::m_object, CBiostruc_descr_Base::ResetSelection(), and rapidjson::value.
CBiostruc_descr_Base::TAttribution & CBiostruc_descr_Base::SetAttribution | ( | void | ) |
Select the variant.
Definition at line 161 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_Attribution, eDoNotResetVariant, CBiostruc_descr_Base::m_object, and CBiostruc_descr_Base::Select().
|
inline |
Assign a value to Biostrucs data member.
Definition at line 297 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Biostrucs, and CBiostruc_set_Base::m_set_State.
void CBiostruc_Base::SetChemical_graph | ( | CBiostruc_Base::TChemical_graph & | value | ) |
Assign a value to Chemical_graph data member.
value | Reference to value. |
Definition at line 76 of file Biostruc_.cpp.
References CBiostruc_Base::m_Chemical_graph, and rapidjson::value.
|
inline |
Assign a value to Chemical_graph data member.
Definition at line 385 of file Biostruc_.hpp.
References CBiostruc_Base::m_Chemical_graph, and CBiostruc_Base::ResetChemical_graph().
void CBiostruc_history_Base::SetData_source | ( | CBiostruc_history_Base::TData_source & | value | ) |
Assign a value to Data_source data member.
value | Reference to value. |
Definition at line 91 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Data_source, and rapidjson::value.
CBiostruc_history_Base::TData_source & CBiostruc_history_Base::SetData_source | ( | void | ) |
Assign a value to Data_source data member.
Definition at line 96 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Data_source.
void CBiostruc_source_Base::SetDatabase_entry_date | ( | CBiostruc_source_Base::TDatabase_entry_date & | value | ) |
Assign a value to Database_entry_date data member.
value | Reference to value. |
Definition at line 205 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Database_entry_date, and rapidjson::value.
|
inline |
Assign a value to Database_entry_date data member.
Definition at line 649 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_date, and CBiostruc_source_Base::ResetDatabase_entry_date().
|
inline |
Assign a value to Database_entry_history data member.
Definition at line 676 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_history, and CBiostruc_source_Base::m_set_State.
void CBiostruc_source_Base::SetDatabase_entry_id | ( | CBiostruc_source_Base::TDatabase_entry_id & | value | ) |
Assign a value to Database_entry_id data member.
value | Reference to value. |
Definition at line 191 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Database_entry_id, and rapidjson::value.
|
inline |
Assign a value to Database_entry_id data member.
Definition at line 619 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Database_entry_id, and CBiostruc_source_Base::ResetDatabase_entry_id().
void CBiostruc_replace_Base::SetDate | ( | CBiostruc_replace_Base::TDate & | value | ) |
Assign a value to Date data member.
value | Reference to value. |
Definition at line 75 of file Biostruc_replace_.cpp.
References CBiostruc_replace_Base::m_Date, and rapidjson::value.
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inline |
Assign a value to Date data member.
Definition at line 250 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Date, and CBiostruc_replace_Base::ResetDate().
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inline |
Assign a value to Descr data member.
Definition at line 357 of file Biostruc_.hpp.
References CBiostruc_Base::m_Descr, and CBiostruc_Base::m_set_State.
|
inline |
Assign a value to Descr data member.
Definition at line 274 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Descr, and CBiostruc_annot_set_Base::m_set_State.
Referenced by StructureSet::InitStructureAlignments().
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inline |
Assign a value to Descr data member.
Definition at line 277 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Descr, and CBiostruc_residue_graph_set_Base::m_set_State.
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inline |
Assign a value to Descr data member.
Definition at line 272 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Descr, and CBiostruc_set_Base::m_set_State.
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inline |
Assign a value to Features data member.
Definition at line 412 of file Biostruc_.hpp.
References CBiostruc_Base::m_Features, and CBiostruc_Base::m_set_State.
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inline |
Assign a value to Features data member.
Definition at line 299 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Features, and CBiostruc_annot_set_Base::m_set_State.
Referenced by StructureSet::AddStructureAlignment(), Messenger::CreateBiostrucAnnotSetForHighlightsOnSingleObject(), UpdateViewer::GetVASTAlignments(), and StructureSet::InitStructureAlignments().
void CBiostruc_descr_Base::SetHistory | ( | CBiostruc_descr_Base::THistory & | value | ) |
Select the variant and set its data.
value | Reference to the data. |
Definition at line 145 of file Biostruc_descr_.cpp.
References CObject::AddReference(), CBiostruc_descr_Base::e_History, CBiostruc_descr_Base::m_choice, CBiostruc_descr_Base::m_object, CBiostruc_descr_Base::ResetSelection(), and rapidjson::value.
CBiostruc_descr_Base::THistory & CBiostruc_descr_Base::SetHistory | ( | void | ) |
Select the variant.
Definition at line 139 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_History, eDoNotResetVariant, CBiostruc_descr_Base::m_object, and CBiostruc_descr_Base::Select().
void CBiostruc_replace_Base::SetId | ( | CBiostruc_replace_Base::TId & | value | ) |
Assign a value to Id data member.
value | Reference to value. |
Definition at line 61 of file Biostruc_replace_.cpp.
References CBiostruc_replace_Base::m_Id, and rapidjson::value.
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inline |
Assign a value to Id data member.
Definition at line 332 of file Biostruc_.hpp.
References CBiostruc_Base::m_Id, and CBiostruc_Base::m_set_State.
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inline |
Assign a value to Id data member.
Definition at line 249 of file Biostruc_annot_set_.hpp.
References CBiostruc_annot_set_Base::m_Id, and CBiostruc_annot_set_Base::m_set_State.
Referenced by Messenger::CreateBiostrucAnnotSetForHighlightsOnSingleObject(), and StructureSet::InitStructureAlignments().
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inline |
Assign a value to Id data member.
Definition at line 220 of file Biostruc_replace_.hpp.
References CBiostruc_replace_Base::m_Id, and CBiostruc_replace_Base::ResetId().
|
inline |
Assign a value to Id data member.
Definition at line 252 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Id, and CBiostruc_residue_graph_set_Base::m_set_State.
|
inline |
Assign a value to Id data member.
Definition at line 247 of file Biostruc_set_.hpp.
References CBiostruc_set_Base::m_Id, and CBiostruc_set_Base::m_set_State.
void CBiostruc_id_Base::SetLocal_id | ( | CBiostruc_id_Base::TLocal_id & | value | ) |
Select the variant and set its data.
value | Reference to the data. |
Definition at line 149 of file Biostruc_id_.cpp.
References CObject::AddReference(), CBiostruc_id_Base::e_Local_id, CBiostruc_id_Base::m_choice, CBiostruc_id_Base::m_object, CBiostruc_id_Base::ResetSelection(), and rapidjson::value.
CBiostruc_id_Base::TLocal_id & CBiostruc_id_Base::SetLocal_id | ( | void | ) |
Select the variant.
Definition at line 143 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::e_Local_id, eDoNotResetVariant, CBiostruc_id_Base::m_object, and CBiostruc_id_Base::Select().
Select the variant and set its data.
value | Variant data. |
Definition at line 109 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::e_Mmdb_id, eDoNotResetVariant, CBiostruc_id_Base::m_Mmdb_id, CBiostruc_id_Base::Select(), and rapidjson::value.
|
inline |
Select the variant.
Definition at line 309 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::e_Mmdb_id, eDoNotResetVariant, CBiostruc_id_Base::m_Mmdb_id, and CBiostruc_id_Base::Select().
Referenced by Messenger::CreateBiostrucAnnotSetForHighlightsOnSingleObject(), and StructureObject::RealignStructure().
|
inline |
Assign a value to Model data member.
Definition at line 437 of file Biostruc_.hpp.
References CBiostruc_Base::m_Model, and CBiostruc_Base::m_set_State.
Referenced by CreateMimeFromBiostruc().
Select the variant and set its data.
value | Variant data. |
Definition at line 115 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_Name, eDoNotResetVariant, CBiostruc_descr_Base::m_string, CBiostruc_descr_Base::Select(), and rapidjson::value.
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inline |
Select the variant.
Definition at line 372 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Name, eDoNotResetVariant, CBiostruc_descr_Base::m_string, and CBiostruc_descr_Base::Select().
|
inline |
Assign a value to Name_of_database data member.
value | Value to assign |
Definition at line 551 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Name_of_database, CBiostruc_source_Base::m_set_State, and rapidjson::value.
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inline |
Definition at line 558 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::m_Name_of_database, CBiostruc_source_Base::m_set_State, and rapidjson::value.
|
inline |
Assign a value to Name_of_database data member.
Definition at line 565 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::IsSetName_of_database(), CBiostruc_source_Base::m_Name_of_database, CBiostruc_source_Base::m_set_State, and CSerialObject::UnassignedString().
void CBiostruc_descr_Base::SetOther_comment | ( | const TOther_comment & | value | ) |
Select the variant and set its data.
value | Variant data. |
Definition at line 127 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_Other_comment, eDoNotResetVariant, CBiostruc_descr_Base::m_string, CBiostruc_descr_Base::Select(), and rapidjson::value.
|
inline |
Select the variant.
Definition at line 412 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Other_comment, eDoNotResetVariant, CBiostruc_descr_Base::m_string, and CBiostruc_descr_Base::Select().
void CBiostruc_id_Base::SetOther_database | ( | CBiostruc_id_Base::TOther_database & | value | ) |
Select the variant and set its data.
value | Reference to the data. |
Definition at line 127 of file Biostruc_id_.cpp.
References CObject::AddReference(), CBiostruc_id_Base::e_Other_database, CBiostruc_id_Base::m_choice, CBiostruc_id_Base::m_object, CBiostruc_id_Base::ResetSelection(), and rapidjson::value.
CBiostruc_id_Base::TOther_database & CBiostruc_id_Base::SetOther_database | ( | void | ) |
Select the variant.
Definition at line 121 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::e_Other_database, eDoNotResetVariant, CBiostruc_id_Base::m_object, and CBiostruc_id_Base::Select().
void CBiostruc_descr_Base::SetPdb_comment | ( | const TPdb_comment & | value | ) |
Select the variant and set its data.
value | Variant data. |
Definition at line 121 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::e_Pdb_comment, eDoNotResetVariant, CBiostruc_descr_Base::m_string, CBiostruc_descr_Base::Select(), and rapidjson::value.
|
inline |
Select the variant.
Definition at line 392 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::e_Pdb_comment, eDoNotResetVariant, CBiostruc_descr_Base::m_string, and CBiostruc_descr_Base::Select().
void CBiostruc_source_Base::C_Version_of_database::SetRelease_code | ( | const TRelease_code & | value | ) |
Select the variant and set its data.
value | Variant data. |
Definition at line 126 of file Biostruc_source_.cpp.
References eDoNotResetVariant, and rapidjson::value.
|
inline |
Select the variant.
Definition at line 523 of file Biostruc_source_.hpp.
References eDoNotResetVariant.
void CBiostruc_source_Base::C_Version_of_database::SetRelease_date | ( | TRelease_date & | value | ) |
Select the variant and set its data.
value | Reference to the data. |
Definition at line 116 of file Biostruc_source_.cpp.
References CObject::AddReference(), and rapidjson::value.
CBiostruc_source_Base::C_Version_of_database::TRelease_date & CBiostruc_source_Base::C_Version_of_database::SetRelease_date | ( | void | ) |
Select the variant.
Definition at line 110 of file Biostruc_source_.cpp.
References eDoNotResetVariant.
void CBiostruc_history_Base::SetReplaced_by | ( | CBiostruc_history_Base::TReplaced_by & | value | ) |
Assign a value to Replaced_by data member.
value | Reference to value. |
Definition at line 74 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaced_by, and rapidjson::value.
CBiostruc_history_Base::TReplaced_by & CBiostruc_history_Base::SetReplaced_by | ( | void | ) |
Assign a value to Replaced_by data member.
Definition at line 79 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaced_by.
void CBiostruc_history_Base::SetReplaces | ( | CBiostruc_history_Base::TReplaces & | value | ) |
Assign a value to Replaces data member.
value | Reference to value. |
Definition at line 57 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaces, and rapidjson::value.
CBiostruc_history_Base::TReplaces & CBiostruc_history_Base::SetReplaces | ( | void | ) |
Assign a value to Replaces data member.
Definition at line 62 of file Biostruc_history_.cpp.
References CBiostruc_history_Base::m_Replaces.
|
inline |
Assign a value to Residue_graphs data member.
Definition at line 302 of file Biostruc_residue_graph_set_.hpp.
References CBiostruc_residue_graph_set_Base::m_Residue_graphs, and CBiostruc_residue_graph_set_Base::m_set_State.
void CBiostruc_source_Base::SetVersion_of_database | ( | CBiostruc_source_Base::TVersion_of_database & | value | ) |
Assign a value to Version_of_database data member.
value | Reference to value. |
Definition at line 170 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Version_of_database, and rapidjson::value.
CBiostruc_source_Base::TVersion_of_database & CBiostruc_source_Base::SetVersion_of_database | ( | void | ) |
Assign a value to Version_of_database data member.
Definition at line 175 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::m_Version_of_database.
void CBiostruc_descr_Base::ThrowInvalidSelection | ( | E_Choice | index | ) | const |
Throw 'InvalidSelection' exception.
index | Expected selection. |
Definition at line 110 of file Biostruc_descr_.cpp.
References DIAG_COMPILE_INFO, CBiostruc_descr_Base::m_choice, and CBiostruc_descr_Base::sm_SelectionNames.
Referenced by CBiostruc_descr_Base::CheckSelected().
void CBiostruc_id_Base::ThrowInvalidSelection | ( | E_Choice | index | ) | const |
Throw 'InvalidSelection' exception.
index | Expected selection. |
Definition at line 104 of file Biostruc_id_.cpp.
References DIAG_COMPILE_INFO, CBiostruc_id_Base::m_choice, and CBiostruc_id_Base::sm_SelectionNames.
Referenced by CBiostruc_id_Base::CheckSelected().
void CBiostruc_source_Base::C_Version_of_database::ThrowInvalidSelection | ( | E_Choice | index | ) | const |
Throw 'InvalidSelection' exception.
index | Expected selection. |
Definition at line 99 of file Biostruc_source_.cpp.
References DIAG_COMPILE_INFO.
|
inline |
Which variant is currently selected.
Definition at line 330 of file Biostruc_descr_.hpp.
References CBiostruc_descr_Base::m_choice.
|
inline |
Which variant is currently selected.
Definition at line 267 of file Biostruc_id_.hpp.
References CBiostruc_id_Base::m_choice.
|
inline |
Which variant is currently selected.
Definition at line 475 of file Biostruc_source_.hpp.
References CBiostruc_source_Base::C_Version_of_database::m_choice.
CBiostruc_source_Base::C_Version_of_database::~C_Version_of_database | ( | void | ) |
Definition at line 153 of file Biostruc_source_.cpp.
References CBiostruc_source_Base::Reset().
CBiostruc_annot_set::~CBiostruc_annot_set | ( | void | ) |
Definition at line 50 of file Biostruc_annot_set.cpp.
|
virtual |
Definition at line 97 of file Biostruc_annot_set_.cpp.
|
virtual |
Definition at line 126 of file Biostruc_.cpp.
CBiostruc_descr::~CBiostruc_descr | ( | void | ) |
Definition at line 50 of file Biostruc_descr.cpp.
|
virtual |
Definition at line 200 of file Biostruc_descr_.cpp.
References CBiostruc_descr_Base::Reset().
CBiostruc_history::~CBiostruc_history | ( | void | ) |
Definition at line 50 of file Biostruc_history.cpp.
|
virtual |
Definition at line 129 of file Biostruc_history_.cpp.
CBiostruc_id::~CBiostruc_id | ( | void | ) |
Definition at line 50 of file Biostruc_id.cpp.
|
virtual |
Definition at line 180 of file Biostruc_id_.cpp.
References CBiostruc_id_Base::Reset().
CBiostruc_replace::~CBiostruc_replace | ( | void | ) |
Definition at line 50 of file Biostruc_replace.cpp.
|
virtual |
Definition at line 108 of file Biostruc_replace_.cpp.
CBiostruc_residue_graph_set::~CBiostruc_residue_graph_set | ( | void | ) |
Definition at line 50 of file Biostruc_residue_graph_set.cpp.
|
virtual |
Definition at line 97 of file Biostruc_residue_graph_set_.cpp.
CBiostruc_set::~CBiostruc_set | ( | void | ) |
Definition at line 50 of file Biostruc_set.cpp.
|
virtual |
Definition at line 97 of file Biostruc_set_.cpp.
CBiostruc_source::~CBiostruc_source | ( | void | ) |
Definition at line 50 of file Biostruc_source.cpp.
|
virtual |
Definition at line 250 of file Biostruc_source_.cpp.
union { ... } |
union { ... } |
union { ... } |
Definition at line 216 of file Biostruc_set_.hpp.
Referenced by CBiostruc_set_Base::GetBiostrucs(), CBiostruc_set_Base::ResetBiostrucs(), and CBiostruc_set_Base::SetBiostrucs().
|
private |
Definition at line 299 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::GetChemical_graph(), CBiostruc_Base::IsSetChemical_graph(), CBiostruc_Base::ResetChemical_graph(), and CBiostruc_Base::SetChemical_graph().
|
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Definition at line 308 of file Biostruc_descr_.hpp.
Referenced by CBiostruc_descr_Base::CheckSelected(), CBiostruc_descr_Base::DoSelect(), CBiostruc_descr_Base::IsAttribution(), CBiostruc_descr_Base::IsHistory(), CBiostruc_descr_Base::IsName(), CBiostruc_descr_Base::IsOther_comment(), CBiostruc_descr_Base::IsPdb_comment(), CBiostruc_descr_Base::Reset(), CBiostruc_descr_Base::ResetSelection(), CBiostruc_descr_Base::SetAttribution(), CBiostruc_descr_Base::SetHistory(), CBiostruc_descr_Base::ThrowInvalidSelection(), and CBiostruc_descr_Base::Which().
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Definition at line 245 of file Biostruc_id_.hpp.
Referenced by CBiostruc_id_Base::CheckSelected(), CBiostruc_id_Base::DoSelect(), CBiostruc_id_Base::IsLocal_id(), CBiostruc_id_Base::IsMmdb_id(), CBiostruc_id_Base::IsOther_database(), CBiostruc_id_Base::Reset(), CBiostruc_id_Base::ResetSelection(), CBiostruc_id_Base::SetLocal_id(), CBiostruc_id_Base::SetOther_database(), CBiostruc_id_Base::ThrowInvalidSelection(), and CBiostruc_id_Base::Which().
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Definition at line 235 of file Biostruc_source_.hpp.
Referenced by CBiostruc_source_Base::C_Version_of_database::Reset(), and CBiostruc_source_Base::C_Version_of_database::Which().
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Definition at line 228 of file Biostruc_history_.hpp.
Referenced by CBiostruc_history_Base::GetData_source(), CBiostruc_history_Base::IsSetData_source(), CBiostruc_history_Base::ResetData_source(), and CBiostruc_history_Base::SetData_source().
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Definition at line 461 of file Biostruc_source_.hpp.
Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CBiostruc_source_Base::GetDatabase_entry_date(), CBiostruc_source_Base::IsSetDatabase_entry_date(), CBiostruc_source_Base::ResetDatabase_entry_date(), and CBiostruc_source_Base::SetDatabase_entry_date().
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Definition at line 462 of file Biostruc_source_.hpp.
Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CBiostruc_source_Base::GetDatabase_entry_history(), CBiostruc_source_Base::ResetDatabase_entry_history(), and CBiostruc_source_Base::SetDatabase_entry_history().
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Definition at line 186 of file Biostruc_replace_.hpp.
Referenced by CBiostruc_replace_Base::GetDate(), CBiostruc_replace_Base::IsSetDate(), CBiostruc_replace_Base::ResetDate(), and CBiostruc_replace_Base::SetDate().
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Definition at line 298 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::GetDescr(), CBiostruc_Base::ResetDescr(), and CBiostruc_Base::SetDescr().
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Definition at line 217 of file Biostruc_annot_set_.hpp.
Referenced by CBiostruc_annot_set_Base::GetDescr(), CBiostruc_annot_set_Base::ResetDescr(), and CBiostruc_annot_set_Base::SetDescr().
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Definition at line 220 of file Biostruc_residue_graph_set_.hpp.
Referenced by CBiostruc_residue_graph_set_Base::GetDescr(), CBiostruc_residue_graph_set_Base::ResetDescr(), and CBiostruc_residue_graph_set_Base::SetDescr().
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Definition at line 215 of file Biostruc_set_.hpp.
Referenced by CBiostruc_set_Base::GetDescr(), CBiostruc_set_Base::ResetDescr(), and CBiostruc_set_Base::SetDescr().
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Definition at line 300 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::GetFeatures(), CBiostruc_Base::ResetFeatures(), and CBiostruc_Base::SetFeatures().
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Definition at line 218 of file Biostruc_annot_set_.hpp.
Referenced by CBiostruc_annot_set_Base::GetFeatures(), CBiostruc_annot_set_Base::ResetFeatures(), and CBiostruc_annot_set_Base::SetFeatures().
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Definition at line 297 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::GetId(), CBiostruc_Base::ResetId(), and CBiostruc_Base::SetId().
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Definition at line 216 of file Biostruc_annot_set_.hpp.
Referenced by CBiostruc_annot_set_Base::GetId(), CBiostruc_annot_set_Base::ResetId(), and CBiostruc_annot_set_Base::SetId().
Definition at line 185 of file Biostruc_replace_.hpp.
Referenced by CBiostruc_replace_Base::GetId(), CBiostruc_replace_Base::IsSetId(), CBiostruc_replace_Base::ResetId(), and CBiostruc_replace_Base::SetId().
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Definition at line 219 of file Biostruc_residue_graph_set_.hpp.
Referenced by CBiostruc_residue_graph_set_Base::GetId(), CBiostruc_residue_graph_set_Base::ResetId(), and CBiostruc_residue_graph_set_Base::SetId().
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Definition at line 214 of file Biostruc_set_.hpp.
Referenced by CBiostruc_set_Base::GetId(), CBiostruc_set_Base::ResetId(), and CBiostruc_set_Base::SetId().
NCBI_NS_NCBI::CUnionBuffer<TMmdb_id> { ... } ::m_Mmdb_id |
Definition at line 252 of file Biostruc_id_.hpp.
NCBI_NS_NCBI::CUnionBuffer<TMmdb_id> CBiostruc_id_Base::m_Mmdb_id |
Definition at line 252 of file Biostruc_id_.hpp.
Referenced by CBiostruc_id_Base::DoSelect(), CBiostruc_id_Base::GetMmdb_id(), CBiostruc_id_Base::ResetSelection(), and CBiostruc_id_Base::SetMmdb_id().
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Definition at line 301 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::GetModel(), CBiostruc_Base::ResetModel(), and CBiostruc_Base::SetModel().
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Definition at line 458 of file Biostruc_source_.hpp.
Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CBiostruc_source_Base::GetName_of_database(), CBiostruc_source_Base::ResetName_of_database(), and CBiostruc_source_Base::SetName_of_database().
NCBI_NS_NCBI::CSerialObject* { ... } ::m_object |
Definition at line 316 of file Biostruc_descr_.hpp.
NCBI_NS_NCBI::CSerialObject* CBiostruc_descr_Base::m_object |
Definition at line 316 of file Biostruc_descr_.hpp.
Referenced by CBiostruc_descr_Base::DoSelect(), CBiostruc_descr_Base::GetAttribution(), CBiostruc_descr_Base::GetHistory(), CBiostruc_descr_Base::ResetSelection(), CBiostruc_descr_Base::SetAttribution(), and CBiostruc_descr_Base::SetHistory().
NCBI_NS_NCBI::CSerialObject* CBiostruc_id_Base::m_object |
Definition at line 253 of file Biostruc_id_.hpp.
Referenced by CBiostruc_id_Base::DoSelect(), CBiostruc_id_Base::GetLocal_id(), CBiostruc_id_Base::GetOther_database(), CBiostruc_id_Base::ResetSelection(), CBiostruc_id_Base::SetLocal_id(), and CBiostruc_id_Base::SetOther_database().
NCBI_NS_NCBI::CSerialObject* { ... } ::m_object |
Definition at line 253 of file Biostruc_id_.hpp.
NCBI_NS_NCBI::CSerialObject* CBiostruc_source_Base::C_Version_of_database::m_object |
Definition at line 243 of file Biostruc_source_.hpp.
NCBI_NS_NCBI::CSerialObject* { ... } ::m_object |
Definition at line 243 of file Biostruc_source_.hpp.
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Definition at line 227 of file Biostruc_history_.hpp.
Referenced by CBiostruc_history_Base::GetReplaced_by(), CBiostruc_history_Base::IsSetReplaced_by(), CBiostruc_history_Base::ResetReplaced_by(), and CBiostruc_history_Base::SetReplaced_by().
Definition at line 226 of file Biostruc_history_.hpp.
Referenced by CBiostruc_history_Base::GetReplaces(), CBiostruc_history_Base::IsSetReplaces(), CBiostruc_history_Base::ResetReplaces(), and CBiostruc_history_Base::SetReplaces().
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Definition at line 221 of file Biostruc_residue_graph_set_.hpp.
Referenced by CBiostruc_residue_graph_set_Base::GetResidue_graphs(), CBiostruc_residue_graph_set_Base::ResetResidue_graphs(), and CBiostruc_residue_graph_set_Base::SetResidue_graphs().
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Definition at line 296 of file Biostruc_.hpp.
Referenced by CBiostruc_Base::CBiostruc_Base(), CBiostruc_Base::IsSetDescr(), CBiostruc_Base::IsSetFeatures(), CBiostruc_Base::IsSetId(), CBiostruc_Base::IsSetModel(), CBiostruc_Base::ResetDescr(), CBiostruc_Base::ResetFeatures(), CBiostruc_Base::ResetId(), CBiostruc_Base::ResetModel(), CBiostruc_Base::SetDescr(), CBiostruc_Base::SetFeatures(), CBiostruc_Base::SetId(), and CBiostruc_Base::SetModel().
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Definition at line 215 of file Biostruc_annot_set_.hpp.
Referenced by CBiostruc_annot_set_Base::CBiostruc_annot_set_Base(), CBiostruc_annot_set_Base::IsSetDescr(), CBiostruc_annot_set_Base::IsSetFeatures(), CBiostruc_annot_set_Base::IsSetId(), CBiostruc_annot_set_Base::ResetDescr(), CBiostruc_annot_set_Base::ResetFeatures(), CBiostruc_annot_set_Base::ResetId(), CBiostruc_annot_set_Base::SetDescr(), CBiostruc_annot_set_Base::SetFeatures(), and CBiostruc_annot_set_Base::SetId().
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Definition at line 225 of file Biostruc_history_.hpp.
Referenced by CBiostruc_history_Base::CBiostruc_history_Base().
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Definition at line 184 of file Biostruc_replace_.hpp.
Referenced by CBiostruc_replace_Base::CBiostruc_replace_Base().
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Definition at line 218 of file Biostruc_residue_graph_set_.hpp.
Referenced by CBiostruc_residue_graph_set_Base::CBiostruc_residue_graph_set_Base(), CBiostruc_residue_graph_set_Base::IsSetDescr(), CBiostruc_residue_graph_set_Base::IsSetId(), CBiostruc_residue_graph_set_Base::IsSetResidue_graphs(), CBiostruc_residue_graph_set_Base::ResetDescr(), CBiostruc_residue_graph_set_Base::ResetId(), CBiostruc_residue_graph_set_Base::ResetResidue_graphs(), CBiostruc_residue_graph_set_Base::SetDescr(), CBiostruc_residue_graph_set_Base::SetId(), and CBiostruc_residue_graph_set_Base::SetResidue_graphs().
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Definition at line 213 of file Biostruc_set_.hpp.
Referenced by CBiostruc_set_Base::CBiostruc_set_Base(), CBiostruc_set_Base::IsSetBiostrucs(), CBiostruc_set_Base::IsSetDescr(), CBiostruc_set_Base::IsSetId(), CBiostruc_set_Base::ResetBiostrucs(), CBiostruc_set_Base::ResetDescr(), CBiostruc_set_Base::ResetId(), CBiostruc_set_Base::SetBiostrucs(), CBiostruc_set_Base::SetDescr(), and CBiostruc_set_Base::SetId().
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Definition at line 457 of file Biostruc_source_.hpp.
Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CBiostruc_source_Base::CBiostruc_source_Base(), CBiostruc_source_Base::IsSetDatabase_entry_history(), CBiostruc_source_Base::IsSetName_of_database(), CBiostruc_source_Base::ResetDatabase_entry_history(), CBiostruc_source_Base::ResetName_of_database(), CBiostruc_source_Base::SetDatabase_entry_history(), and CBiostruc_source_Base::SetName_of_database().
NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string |
Definition at line 315 of file Biostruc_descr_.hpp.
NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CBiostruc_descr_Base::m_string |
Definition at line 315 of file Biostruc_descr_.hpp.
Referenced by CBiostruc_descr_Base::DoSelect(), CBiostruc_descr_Base::GetName(), CBiostruc_descr_Base::GetOther_comment(), CBiostruc_descr_Base::GetPdb_comment(), CBiostruc_descr_Base::ResetSelection(), CBiostruc_descr_Base::SetName(), CBiostruc_descr_Base::SetOther_comment(), and CBiostruc_descr_Base::SetPdb_comment().
NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CBiostruc_source_Base::C_Version_of_database::m_string |
Definition at line 242 of file Biostruc_source_.hpp.
NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string |
Definition at line 242 of file Biostruc_source_.hpp.
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Definition at line 459 of file Biostruc_source_.hpp.
Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CBiostruc_source_Base::GetVersion_of_database(), CBiostruc_source_Base::IsSetVersion_of_database(), CBiostruc_source_Base::ResetVersion_of_database(), and CBiostruc_source_Base::SetVersion_of_database().
Definition at line 312 of file Biostruc_descr_.hpp.
Referenced by CBiostruc_descr_Base::SelectionName(), and CBiostruc_descr_Base::ThrowInvalidSelection().
Definition at line 249 of file Biostruc_id_.hpp.
Referenced by CBiostruc_id_Base::SelectionName(), and CBiostruc_id_Base::ThrowInvalidSelection().
Definition at line 239 of file Biostruc_source_.hpp.