Collaboration diagram for Code generated by DATATOOL from 'biotree.asn' (module 'NCBI-BioTree'):

Classes
class	CBioTreeContainer_Base
	CBioTreeContainer_Base –. More...

class	CDistanceMatrix_Base
	CDistanceMatrix_Base –. More...

class	CFeatureDescr
	CFeatureDescr –. More...

class	CFeatureDescr_Base
	CFeatureDescr_Base –. More...

class	CFeatureDictSet
	CFeatureDictSet –. More...

class	CFeatureDictSet_Base
	CFeatureDictSet_Base –. More...

class	CNode
	CNode –. More...

class	CNode_Base
	CNode_Base –. More...

class	CNodeFeature
	CNodeFeature –. More...

class	CNodeFeature_Base
	CNodeFeature_Base –. More...

class	CNodeFeatureSet
	CNodeFeatureSet –. More...

class	CNodeFeatureSet_Base
	CNodeFeatureSet_Base –. More...

class	CNodeSet
	CNodeSet –. More...

class	CNodeSet_Base
	CNodeSet_Base –. More...

Typedefs
typedef CSerialObject	CBioTreeContainer_Base::Tparent

typedef string	CBioTreeContainer_Base::TTreetype

typedef CFeatureDictSet	CBioTreeContainer_Base::TFdict

typedef CNodeSet	CBioTreeContainer_Base::TNodes

typedef string	CBioTreeContainer_Base::TLabel

typedef CUser_object	CBioTreeContainer_Base::TUser

typedef Tparent::CMemberIndex< E_memberIndex, 6 >	CBioTreeContainer_Base::TmemberIndex

typedef CSerialObject	CDistanceMatrix_Base::Tparent

typedef vector< string >	CDistanceMatrix_Base::TLabels

typedef vector< double >	CDistanceMatrix_Base::TDistances

typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CDistanceMatrix_Base::TmemberIndex

typedef CFeatureDescr_Base	CFeatureDescr::Tparent

typedef CSerialObject	CFeatureDescr_Base::Tparent

typedef int	CFeatureDescr_Base::TId

typedef string	CFeatureDescr_Base::TName

typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CFeatureDescr_Base::TmemberIndex

typedef CFeatureDictSet_Base	CFeatureDictSet::Tparent

typedef CSerialObject	CFeatureDictSet_Base::Tparent

typedef list< CRef< CFeatureDescr > >	CFeatureDictSet_Base::Tdata

typedef CNode_Base	CNode::Tparent

typedef CSerialObject	CNode_Base::Tparent

typedef int	CNode_Base::TId

typedef int	CNode_Base::TParent

typedef CNodeFeatureSet	CNode_Base::TFeatures

typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CNode_Base::TmemberIndex

typedef CNodeFeature_Base	CNodeFeature::Tparent

typedef CSerialObject	CNodeFeature_Base::Tparent

typedef int	CNodeFeature_Base::TFeatureid

typedef CStringUTF8	CNodeFeature_Base::TValue

typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNodeFeature_Base::TmemberIndex

typedef CNodeFeatureSet_Base	CNodeFeatureSet::Tparent

typedef CSerialObject	CNodeFeatureSet_Base::Tparent

typedef list< CRef< CNodeFeature > >	CNodeFeatureSet_Base::Tdata

typedef CNodeSet_Base	CNodeSet::Tparent

typedef CSerialObject	CNodeSet_Base::Tparent

typedef list< CRef< CNode > >	CNodeSet_Base::Tdata

Enumerations
enum class	CBioTreeContainer_Base::E_memberIndex { CBioTreeContainer_Base::e__allMandatory = 0 , CBioTreeContainer_Base::e_treetype , CBioTreeContainer_Base::e_fdict , CBioTreeContainer_Base::e_nodes , CBioTreeContainer_Base::e_label , CBioTreeContainer_Base::e_user }

enum class	CDistanceMatrix_Base::E_memberIndex { CDistanceMatrix_Base::e__allMandatory = 0 , CDistanceMatrix_Base::e_labels , CDistanceMatrix_Base::e_distances }

enum class	CFeatureDescr_Base::E_memberIndex { CFeatureDescr_Base::e__allMandatory = 0 , CFeatureDescr_Base::e_id , CFeatureDescr_Base::e_name }

enum class	CNode_Base::E_memberIndex { CNode_Base::e__allMandatory = 0 , CNode_Base::e_id , CNode_Base::e_parent , CNode_Base::e_features }

enum class	CNodeFeature_Base::E_memberIndex { CNodeFeature_Base::e__allMandatory = 0 , CNodeFeature_Base::e_featureid , CNodeFeature_Base::e_value }

Functions
	CBioTreeContainer_Base::CBioTreeContainer_Base (void)

virtual	CBioTreeContainer_Base::~CBioTreeContainer_Base (void)

	CBioTreeContainer_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CBioTreeContainer_Base::IsSetTreetype (void) const
	hint on what kind of tree this is Check if a value has been assigned to Treetype data member. More...

bool	CBioTreeContainer_Base::CanGetTreetype (void) const
	Check if it is safe to call GetTreetype method. More...

void	CBioTreeContainer_Base::ResetTreetype (void)
	Reset Treetype data member. More...

const TTreetype &	CBioTreeContainer_Base::GetTreetype (void) const
	Get the Treetype member data. More...

void	CBioTreeContainer_Base::SetTreetype (const TTreetype &value)
	Assign a value to Treetype data member. More...

void	CBioTreeContainer_Base::SetTreetype (TTreetype &&value)

TTreetype &	CBioTreeContainer_Base::SetTreetype (void)
	Assign a value to Treetype data member. More...

bool	CBioTreeContainer_Base::IsSetFdict (void) const
	features dictionary Check if a value has been assigned to Fdict data member. More...

bool	CBioTreeContainer_Base::CanGetFdict (void) const
	Check if it is safe to call GetFdict method. More...

void	CBioTreeContainer_Base::ResetFdict (void)
	Reset Fdict data member. More...

const TFdict &	CBioTreeContainer_Base::GetFdict (void) const
	Get the Fdict member data. More...

void	CBioTreeContainer_Base::SetFdict (TFdict &value)
	Assign a value to Fdict data member. More...

TFdict &	CBioTreeContainer_Base::SetFdict (void)
	Assign a value to Fdict data member. More...

bool	CBioTreeContainer_Base::IsSetNodes (void) const
	set of nodes with encoded topology Check if a value has been assigned to Nodes data member. More...

bool	CBioTreeContainer_Base::CanGetNodes (void) const
	Check if it is safe to call GetNodes method. More...

void	CBioTreeContainer_Base::ResetNodes (void)
	Reset Nodes data member. More...

const TNodes &	CBioTreeContainer_Base::GetNodes (void) const
	Get the Nodes member data. More...

void	CBioTreeContainer_Base::SetNodes (TNodes &value)
	Assign a value to Nodes data member. More...

TNodes &	CBioTreeContainer_Base::SetNodes (void)
	Assign a value to Nodes data member. More...

bool	CBioTreeContainer_Base::IsSetLabel (void) const
	bio-tree label (short name) Check if a value has been assigned to Label data member. More...

bool	CBioTreeContainer_Base::CanGetLabel (void) const
	Check if it is safe to call GetLabel method. More...

void	CBioTreeContainer_Base::ResetLabel (void)
	Reset Label data member. More...

const TLabel &	CBioTreeContainer_Base::GetLabel (void) const
	Get the Label member data. More...

void	CBioTreeContainer_Base::SetLabel (const TLabel &value)
	Assign a value to Label data member. More...

void	CBioTreeContainer_Base::SetLabel (TLabel &&value)

TLabel &	CBioTreeContainer_Base::SetLabel (void)
	Assign a value to Label data member. More...

bool	CBioTreeContainer_Base::IsSetUser (void) const
	user defined object Check if a value has been assigned to User data member. More...

bool	CBioTreeContainer_Base::CanGetUser (void) const
	Check if it is safe to call GetUser method. More...

void	CBioTreeContainer_Base::ResetUser (void)
	Reset User data member. More...

const TUser &	CBioTreeContainer_Base::GetUser (void) const
	Get the User member data. More...

void	CBioTreeContainer_Base::SetUser (TUser &value)
	Assign a value to User data member. More...

TUser &	CBioTreeContainer_Base::SetUser (void)
	Assign a value to User data member. More...

virtual void	CBioTreeContainer_Base::Reset (void)
	Reset the whole object. More...

	CBioTreeContainer_Base::CBioTreeContainer_Base (const CBioTreeContainer_Base &)

CBioTreeContainer_Base &	CBioTreeContainer_Base::operator= (const CBioTreeContainer_Base &)

	CDistanceMatrix_Base::CDistanceMatrix_Base (void)

virtual	CDistanceMatrix_Base::~CDistanceMatrix_Base (void)

	CDistanceMatrix_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CDistanceMatrix_Base::IsSetLabels (void) const
	n labels Check if a value has been assigned to Labels data member. More...

bool	CDistanceMatrix_Base::CanGetLabels (void) const
	Check if it is safe to call GetLabels method. More...

void	CDistanceMatrix_Base::ResetLabels (void)
	Reset Labels data member. More...

const TLabels &	CDistanceMatrix_Base::GetLabels (void) const
	Get the Labels member data. More...

TLabels &	CDistanceMatrix_Base::SetLabels (void)
	Assign a value to Labels data member. More...

bool	CDistanceMatrix_Base::IsSetDistances (void) const
	n(n-1)/2 pairwise distances (0, 1)...(0, n), (1, 2)...(1, n)... More...

bool	CDistanceMatrix_Base::CanGetDistances (void) const
	Check if it is safe to call GetDistances method. More...

void	CDistanceMatrix_Base::ResetDistances (void)
	Reset Distances data member. More...

const TDistances &	CDistanceMatrix_Base::GetDistances (void) const
	Get the Distances member data. More...

TDistances &	CDistanceMatrix_Base::SetDistances (void)
	Assign a value to Distances data member. More...

virtual void	CDistanceMatrix_Base::Reset (void)
	Reset the whole object. More...

	CDistanceMatrix_Base::CDistanceMatrix_Base (const CDistanceMatrix_Base &)

CDistanceMatrix_Base &	CDistanceMatrix_Base::operator= (const CDistanceMatrix_Base &)

	CFeatureDescr::CFeatureDescr (void)

	CFeatureDescr::~CFeatureDescr (void)

	CFeatureDescr::CFeatureDescr (const CFeatureDescr &value)

CFeatureDescr &	CFeatureDescr::operator= (const CFeatureDescr &value)

	CFeatureDescr_Base::CFeatureDescr_Base (void)

virtual	CFeatureDescr_Base::~CFeatureDescr_Base (void)

	CFeatureDescr_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CFeatureDescr_Base::IsSetId (void) const
	feature id Check if a value has been assigned to Id data member. More...

bool	CFeatureDescr_Base::CanGetId (void) const
	Check if it is safe to call GetId method. More...

void	CFeatureDescr_Base::ResetId (void)
	Reset Id data member. More...

TId	CFeatureDescr_Base::GetId (void) const
	Get the Id member data. More...

void	CFeatureDescr_Base::SetId (TId value)
	Assign a value to Id data member. More...

TId &	CFeatureDescr_Base::SetId (void)
	Assign a value to Id data member. More...

bool	CFeatureDescr_Base::IsSetName (void) const
	feature name Check if a value has been assigned to Name data member. More...

bool	CFeatureDescr_Base::CanGetName (void) const
	Check if it is safe to call GetName method. More...

void	CFeatureDescr_Base::ResetName (void)
	Reset Name data member. More...

const TName &	CFeatureDescr_Base::GetName (void) const
	Get the Name member data. More...

void	CFeatureDescr_Base::SetName (const TName &value)
	Assign a value to Name data member. More...

void	CFeatureDescr_Base::SetName (TName &&value)

TName &	CFeatureDescr_Base::SetName (void)
	Assign a value to Name data member. More...

virtual void	CFeatureDescr_Base::Reset (void)
	Reset the whole object. More...

	CFeatureDescr_Base::CFeatureDescr_Base (const CFeatureDescr_Base &)

CFeatureDescr_Base &	CFeatureDescr_Base::operator= (const CFeatureDescr_Base &)

	CFeatureDictSet::CFeatureDictSet (void)

	CFeatureDictSet::~CFeatureDictSet (void)

	CFeatureDictSet::CFeatureDictSet (const CFeatureDictSet &value)

CFeatureDictSet &	CFeatureDictSet::operator= (const CFeatureDictSet &value)

	CFeatureDictSet_Base::CFeatureDictSet_Base (void)

virtual	CFeatureDictSet_Base::~CFeatureDictSet_Base (void)

	CFeatureDictSet_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CFeatureDictSet_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...

bool	CFeatureDictSet_Base::CanGet (void) const
	Check if it is safe to call Get method. More...

void	CFeatureDictSet_Base::Reset (void)
	Reset data member. More...

const Tdata &	CFeatureDictSet_Base::Get (void) const
	Get the member data. More...

Tdata &	CFeatureDictSet_Base::Set (void)
	Assign a value to data member. More...

	CFeatureDictSet_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...

	CFeatureDictSet_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...

	CFeatureDictSet_Base::CFeatureDictSet_Base (const CFeatureDictSet_Base &)

CFeatureDictSet_Base &	CFeatureDictSet_Base::operator= (const CFeatureDictSet_Base &)

	CNode::CNode (void)

	CNode::~CNode (void)

	CNode::CNode (const CNode &value)

CNode &	CNode::operator= (const CNode &value)

	CNode_Base::CNode_Base (void)

virtual	CNode_Base::~CNode_Base (void)

	CNode_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CNode_Base::IsSetId (void) const
	node uid Check if a value has been assigned to Id data member. More...

bool	CNode_Base::CanGetId (void) const
	Check if it is safe to call GetId method. More...

void	CNode_Base::ResetId (void)
	Reset Id data member. More...

TId	CNode_Base::GetId (void) const
	Get the Id member data. More...

void	CNode_Base::SetId (TId value)
	Assign a value to Id data member. More...

TId &	CNode_Base::SetId (void)
	Assign a value to Id data member. More...

bool	CNode_Base::IsSetParent (void) const
	parent node id Check if a value has been assigned to Parent data member. More...

bool	CNode_Base::CanGetParent (void) const
	Check if it is safe to call GetParent method. More...

void	CNode_Base::ResetParent (void)
	Reset Parent data member. More...

TParent	CNode_Base::GetParent (void) const
	Get the Parent member data. More...

void	CNode_Base::SetParent (TParent value)
	Assign a value to Parent data member. More...

TParent &	CNode_Base::SetParent (void)
	Assign a value to Parent data member. More...

bool	CNode_Base::IsSetFeatures (void) const
	Check if a value has been assigned to Features data member. More...

bool	CNode_Base::CanGetFeatures (void) const
	Check if it is safe to call GetFeatures method. More...

void	CNode_Base::ResetFeatures (void)
	Reset Features data member. More...

const TFeatures &	CNode_Base::GetFeatures (void) const
	Get the Features member data. More...

void	CNode_Base::SetFeatures (TFeatures &value)
	Assign a value to Features data member. More...

TFeatures &	CNode_Base::SetFeatures (void)
	Assign a value to Features data member. More...

virtual void	CNode_Base::Reset (void)
	Reset the whole object. More...

	CNode_Base::CNode_Base (const CNode_Base &)

CNode_Base &	CNode_Base::operator= (const CNode_Base &)

	CNodeFeature::CNodeFeature (void)

	CNodeFeature::~CNodeFeature (void)

	CNodeFeature::CNodeFeature (const CNodeFeature &value)

CNodeFeature &	CNodeFeature::operator= (const CNodeFeature &value)

	CNodeFeature_Base::CNodeFeature_Base (void)

virtual	CNodeFeature_Base::~CNodeFeature_Base (void)

	CNodeFeature_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CNodeFeature_Base::IsSetFeatureid (void) const
	Check if a value has been assigned to Featureid data member. More...

bool	CNodeFeature_Base::CanGetFeatureid (void) const
	Check if it is safe to call GetFeatureid method. More...

void	CNodeFeature_Base::ResetFeatureid (void)
	Reset Featureid data member. More...

TFeatureid	CNodeFeature_Base::GetFeatureid (void) const
	Get the Featureid member data. More...

void	CNodeFeature_Base::SetFeatureid (TFeatureid value)
	Assign a value to Featureid data member. More...

TFeatureid &	CNodeFeature_Base::SetFeatureid (void)
	Assign a value to Featureid data member. More...

bool	CNodeFeature_Base::IsSetValue (void) const
	Check if a value has been assigned to Value data member. More...

bool	CNodeFeature_Base::CanGetValue (void) const
	Check if it is safe to call GetValue method. More...

void	CNodeFeature_Base::ResetValue (void)
	Reset Value data member. More...

const TValue &	CNodeFeature_Base::GetValue (void) const
	Get the Value member data. More...

void	CNodeFeature_Base::SetValue (const TValue &value)
	Assign a value to Value data member. More...

void	CNodeFeature_Base::SetValue (TValue &&value)

TValue &	CNodeFeature_Base::SetValue (void)
	Assign a value to Value data member. More...

virtual void	CNodeFeature_Base::Reset (void)
	Reset the whole object. More...

	CNodeFeature_Base::CNodeFeature_Base (const CNodeFeature_Base &)

CNodeFeature_Base &	CNodeFeature_Base::operator= (const CNodeFeature_Base &)

	CNodeFeatureSet::CNodeFeatureSet (void)

	CNodeFeatureSet::~CNodeFeatureSet (void)

	CNodeFeatureSet::CNodeFeatureSet (const CNodeFeatureSet &value)

CNodeFeatureSet &	CNodeFeatureSet::operator= (const CNodeFeatureSet &value)

	CNodeFeatureSet_Base::CNodeFeatureSet_Base (void)

virtual	CNodeFeatureSet_Base::~CNodeFeatureSet_Base (void)

	CNodeFeatureSet_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CNodeFeatureSet_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...

bool	CNodeFeatureSet_Base::CanGet (void) const
	Check if it is safe to call Get method. More...

void	CNodeFeatureSet_Base::Reset (void)
	Reset data member. More...

const Tdata &	CNodeFeatureSet_Base::Get (void) const
	Get the member data. More...

Tdata &	CNodeFeatureSet_Base::Set (void)
	Assign a value to data member. More...

	CNodeFeatureSet_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...

	CNodeFeatureSet_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...

	CNodeFeatureSet_Base::CNodeFeatureSet_Base (const CNodeFeatureSet_Base &)

CNodeFeatureSet_Base &	CNodeFeatureSet_Base::operator= (const CNodeFeatureSet_Base &)

	CNodeSet::CNodeSet (void)

	CNodeSet::~CNodeSet (void)

	CNodeSet::CNodeSet (const CNodeSet &value)

CNodeSet &	CNodeSet::operator= (const CNodeSet &value)

	CNodeSet_Base::CNodeSet_Base (void)

virtual	CNodeSet_Base::~CNodeSet_Base (void)

	CNodeSet_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CNodeSet_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...

bool	CNodeSet_Base::CanGet (void) const
	Check if it is safe to call Get method. More...

void	CNodeSet_Base::Reset (void)
	Reset data member. More...

const Tdata &	CNodeSet_Base::Get (void) const
	Get the member data. More...

Tdata &	CNodeSet_Base::Set (void)
	Assign a value to data member. More...

	CNodeSet_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...

	CNodeSet_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...

	CNodeSet_Base::CNodeSet_Base (const CNodeSet_Base &)

CNodeSet_Base &	CNodeSet_Base::operator= (const CNodeSet_Base &)

Variables
Uint4	CBioTreeContainer_Base::m_set_State [1]

string	CBioTreeContainer_Base::m_Treetype

CRef< TFdict >	CBioTreeContainer_Base::m_Fdict

CRef< TNodes >	CBioTreeContainer_Base::m_Nodes

string	CBioTreeContainer_Base::m_Label

CRef< TUser >	CBioTreeContainer_Base::m_User

Uint4	CDistanceMatrix_Base::m_set_State [1]

vector< string >	CDistanceMatrix_Base::m_Labels

vector< double >	CDistanceMatrix_Base::m_Distances

Uint4	CFeatureDescr_Base::m_set_State [1]

int	CFeatureDescr_Base::m_Id

string	CFeatureDescr_Base::m_Name

Uint4	CFeatureDictSet_Base::m_set_State [1]

list< CRef< CFeatureDescr > >	CFeatureDictSet_Base::m_data

Uint4	CNode_Base::m_set_State [1]

int	CNode_Base::m_Id

int	CNode_Base::m_Parent

CRef< TFeatures >	CNode_Base::m_Features

Uint4	CNodeFeature_Base::m_set_State [1]

int	CNodeFeature_Base::m_Featureid

CStringUTF8	CNodeFeature_Base::m_Value

Uint4	CNodeFeatureSet_Base::m_set_State [1]

list< CRef< CNodeFeature > >	CNodeFeatureSet_Base::m_data

Uint4	CNodeSet_Base::m_set_State [1]

list< CRef< CNode > >	CNodeSet_Base::m_data

Detailed Description

Typedef Documentation

◆ Tdata [1/3]

typedef list< CRef< CFeatureDescr > > CFeatureDictSet_Base::Tdata

Definition at line 89 of file FeatureDictSet_.hpp.

◆ Tdata [2/3]

typedef list< CRef< CNodeFeature > > CNodeFeatureSet_Base::Tdata

Definition at line 89 of file NodeFeatureSet_.hpp.

◆ Tdata [3/3]

typedef list< CRef< CNode > > CNodeSet_Base::Tdata

Definition at line 89 of file NodeSet_.hpp.

◆ TDistances

typedef vector< double > CDistanceMatrix_Base::TDistances

Definition at line 87 of file DistanceMatrix_.hpp.

◆ TFdict

typedef CFeatureDictSet CBioTreeContainer_Base::TFdict

Definition at line 92 of file BioTreeContainer_.hpp.

◆ TFeatureid

typedef int CNodeFeature_Base::TFeatureid

Definition at line 85 of file NodeFeature_.hpp.

◆ TFeatures

typedef CNodeFeatureSet CNode_Base::TFeatures

Definition at line 87 of file Node_.hpp.

◆ TId [1/2]

typedef int CFeatureDescr_Base::TId

Definition at line 85 of file FeatureDescr_.hpp.

◆ TId [2/2]

typedef int CNode_Base::TId

Definition at line 85 of file Node_.hpp.

◆ TLabel

typedef string CBioTreeContainer_Base::TLabel

Definition at line 94 of file BioTreeContainer_.hpp.

◆ TLabels

typedef vector< string > CDistanceMatrix_Base::TLabels

Definition at line 86 of file DistanceMatrix_.hpp.

◆ TmemberIndex [1/5]

typedef Tparent::CMemberIndex<E_memberIndex, 6> CBioTreeContainer_Base::TmemberIndex

Definition at line 106 of file BioTreeContainer_.hpp.

◆ TmemberIndex [2/5]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CDistanceMatrix_Base::TmemberIndex

Definition at line 95 of file DistanceMatrix_.hpp.

◆ TmemberIndex [3/5]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CFeatureDescr_Base::TmemberIndex

Definition at line 94 of file FeatureDescr_.hpp.

◆ TmemberIndex [4/5]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CNode_Base::TmemberIndex

Definition at line 96 of file Node_.hpp.

◆ TmemberIndex [5/5]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNodeFeature_Base::TmemberIndex

Definition at line 94 of file NodeFeature_.hpp.

◆ TName

typedef string CFeatureDescr_Base::TName

Definition at line 86 of file FeatureDescr_.hpp.

◆ TNodes

typedef CNodeSet CBioTreeContainer_Base::TNodes

Definition at line 93 of file BioTreeContainer_.hpp.

◆ Tparent [1/14]

typedef CSerialObject CBioTreeContainer_Base::Tparent

private

Definition at line 80 of file BioTreeContainer_.hpp.

◆ Tparent [2/14]

typedef CSerialObject CDistanceMatrix_Base::Tparent

private

Definition at line 75 of file DistanceMatrix_.hpp.

◆ Tparent [3/14]

typedef CFeatureDescr_Base CFeatureDescr::Tparent

private

Definition at line 67 of file FeatureDescr.hpp.

◆ Tparent [4/14]

typedef CSerialObject CFeatureDescr_Base::Tparent

private

Definition at line 74 of file FeatureDescr_.hpp.

◆ Tparent [5/14]

typedef CFeatureDictSet_Base CFeatureDictSet::Tparent

private

Definition at line 67 of file FeatureDictSet.hpp.

◆ Tparent [6/14]

typedef CSerialObject CFeatureDictSet_Base::Tparent

private

Definition at line 78 of file FeatureDictSet_.hpp.

◆ Tparent [7/14]

typedef CNode_Base CNode::Tparent

private

Definition at line 67 of file Node.hpp.

◆ Tparent [8/14]

typedef CSerialObject CNode_Base::Tparent

private

Definition at line 74 of file Node_.hpp.

◆ TParent

typedef int CNode_Base::TParent

Definition at line 86 of file Node_.hpp.

◆ Tparent [9/14]

typedef CNodeFeature_Base CNodeFeature::Tparent

private

Definition at line 67 of file NodeFeature.hpp.

◆ Tparent [10/14]

typedef CSerialObject CNodeFeature_Base::Tparent

private

Definition at line 74 of file NodeFeature_.hpp.

◆ Tparent [11/14]

typedef CNodeFeatureSet_Base CNodeFeatureSet::Tparent

private

Definition at line 67 of file NodeFeatureSet.hpp.

◆ Tparent [12/14]

typedef CSerialObject CNodeFeatureSet_Base::Tparent

private

Definition at line 78 of file NodeFeatureSet_.hpp.

◆ Tparent [13/14]

typedef CNodeSet_Base CNodeSet::Tparent

private

Definition at line 67 of file NodeSet.hpp.

◆ Tparent [14/14]

typedef CSerialObject CNodeSet_Base::Tparent

private

Definition at line 78 of file NodeSet_.hpp.

◆ TTreetype

typedef string CBioTreeContainer_Base::TTreetype

Definition at line 91 of file BioTreeContainer_.hpp.

◆ TUser

typedef CUser_object CBioTreeContainer_Base::TUser

Definition at line 95 of file BioTreeContainer_.hpp.

◆ TValue

typedef CStringUTF8 CNodeFeature_Base::TValue

Definition at line 86 of file NodeFeature_.hpp.

Enumeration Type Documentation

◆ E_memberIndex [1/5]

enum CBioTreeContainer_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_treetype
e_fdict
e_nodes
e_label
e_user

Definition at line 98 of file BioTreeContainer_.hpp.

◆ E_memberIndex [2/5]

enum CDistanceMatrix_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_labels
e_distances

Definition at line 90 of file DistanceMatrix_.hpp.

◆ E_memberIndex [3/5]

enum CFeatureDescr_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_id
e_name

Definition at line 89 of file FeatureDescr_.hpp.

◆ E_memberIndex [4/5]

enum CNode_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_id
e_parent
e_features

Definition at line 90 of file Node_.hpp.

◆ E_memberIndex [5/5]

enum CNodeFeature_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_featureid
e_value

Definition at line 89 of file NodeFeature_.hpp.

Function Documentation

◆ CanGet() [1/3]

bool CFeatureDictSet_Base::CanGet ( void ) const

inline

Check if it is safe to call Get method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 158 of file FeatureDictSet_.hpp.

Referenced by CBioTreeSelection::CBioTreeSelection().

◆ CanGet() [2/3]

bool CNodeFeatureSet_Base::CanGet ( void ) const

inline

Check if it is safe to call Get method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 158 of file NodeFeatureSet_.hpp.

◆ CanGet() [3/3]

bool CNodeSet_Base::CanGet ( void ) const

inline

Check if it is safe to call Get method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 158 of file NodeSet_.hpp.

Referenced by CBioTreeSelection::CBioTreeSelection().

◆ CanGetDistances()

bool CDistanceMatrix_Base::CanGetDistances ( void ) const

inline

Check if it is safe to call GetDistances method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 221 of file DistanceMatrix_.hpp.

◆ CanGetFdict()

bool CBioTreeContainer_Base::CanGetFdict ( void ) const

inline

Check if it is safe to call GetFdict method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 384 of file BioTreeContainer_.hpp.

◆ CanGetFeatureid()

bool CNodeFeature_Base::CanGetFeatureid ( void ) const

inline

Check if it is safe to call GetFeatureid method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 205 of file NodeFeature_.hpp.

References CNodeFeature_Base::IsSetFeatureid().

Referenced by CNodeFeature_Base::GetFeatureid().

◆ CanGetFeatures()

bool CNode_Base::CanGetFeatures ( void ) const

inline

Check if it is safe to call GetFeatures method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 340 of file Node_.hpp.

References CNode_Base::IsSetFeatures().

Referenced by Convert_BioTreeContainer_Seq_id(), CNode_Base::GetFeatures(), and CTableDataBioTreeContainer::x_GetNodeFeature().

◆ CanGetId() [1/2]

bool CFeatureDescr_Base::CanGetId ( void ) const

inline

Check if it is safe to call GetId method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 207 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::IsSetId().

Referenced by CFeatureDescr_Base::GetId().

◆ CanGetId() [2/2]

bool CNode_Base::CanGetId ( void ) const

inline

Check if it is safe to call GetId method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 246 of file Node_.hpp.

References CNode_Base::IsSetId().

Referenced by CNode_Base::GetId().

◆ CanGetLabel()

bool CBioTreeContainer_Base::CanGetLabel ( void ) const

inline

Check if it is safe to call GetLabel method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 444 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::IsSetLabel().

Referenced by CBioTreeContainer_Base::GetLabel().

◆ CanGetLabels()

bool CDistanceMatrix_Base::CanGetLabels ( void ) const

inline

Check if it is safe to call GetLabels method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 196 of file DistanceMatrix_.hpp.

◆ CanGetName()

bool CFeatureDescr_Base::CanGetName ( void ) const

inline

Check if it is safe to call GetName method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 254 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::IsSetName().

Referenced by CFeatureDescr_Base::GetName().

◆ CanGetNodes()

bool CBioTreeContainer_Base::CanGetNodes ( void ) const

inline

Check if it is safe to call GetNodes method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 414 of file BioTreeContainer_.hpp.

◆ CanGetParent()

bool CNode_Base::CanGetParent ( void ) const

inline

Check if it is safe to call GetParent method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 293 of file Node_.hpp.

References CNode_Base::IsSetParent().

Referenced by CTableDataBioTreeContainer::GetIntValue(), and CNode_Base::GetParent().

◆ CanGetTreetype()

bool CBioTreeContainer_Base::CanGetTreetype ( void ) const

inline

Check if it is safe to call GetTreetype method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 337 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::IsSetTreetype().

Referenced by CBioTreeContainer_Base::GetTreetype().

◆ CanGetUser()

bool CBioTreeContainer_Base::CanGetUser ( void ) const

inline

Check if it is safe to call GetUser method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 491 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::IsSetUser().

Referenced by CBioTreeContainer_Base::GetUser().

◆ CanGetValue()

bool CNodeFeature_Base::CanGetValue ( void ) const

inline

Check if it is safe to call GetValue method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 252 of file NodeFeature_.hpp.

References CNodeFeature_Base::IsSetValue().

Referenced by CNodeFeature_Base::GetValue().

◆ CBioTreeContainer_Base() [1/2]

CBioTreeContainer_Base::CBioTreeContainer_Base ( const CBioTreeContainer_Base & )

private

◆ CBioTreeContainer_Base() [2/2]

END_CLASS_INFO CBioTreeContainer_Base::CBioTreeContainer_Base ( void )

Definition at line 134 of file BioTreeContainer_.cpp.

References CObject::IsAllocatedInPool(), CBioTreeContainer_Base::m_set_State, CBioTreeContainer_Base::ResetFdict(), and CBioTreeContainer_Base::ResetNodes().

◆ CDistanceMatrix_Base() [1/2]

CDistanceMatrix_Base::CDistanceMatrix_Base ( const CDistanceMatrix_Base & )

private

◆ CDistanceMatrix_Base() [2/2]

END_CLASS_INFO CDistanceMatrix_Base::CDistanceMatrix_Base ( void )

Definition at line 80 of file DistanceMatrix_.cpp.

References CDistanceMatrix_Base::m_set_State.

◆ CFeatureDescr() [1/2]

CFeatureDescr::CFeatureDescr ( const CFeatureDescr & value )

private

◆ CFeatureDescr() [2/2]

CFeatureDescr::CFeatureDescr ( void )

inline

Definition at line 86 of file FeatureDescr.hpp.

◆ CFeatureDescr_Base() [1/2]

CFeatureDescr_Base::CFeatureDescr_Base ( const CFeatureDescr_Base & )

private

◆ CFeatureDescr_Base() [2/2]

END_CLASS_INFO CFeatureDescr_Base::CFeatureDescr_Base ( void )

Definition at line 74 of file FeatureDescr_.cpp.

References CFeatureDescr_Base::m_set_State.

◆ CFeatureDictSet() [1/2]

CFeatureDictSet::CFeatureDictSet ( const CFeatureDictSet & value )

private

◆ CFeatureDictSet() [2/2]

CFeatureDictSet::CFeatureDictSet ( void )

inline

Definition at line 86 of file FeatureDictSet.hpp.

◆ CFeatureDictSet_Base() [1/2]

CFeatureDictSet_Base::CFeatureDictSet_Base ( const CFeatureDictSet_Base & )

private

◆ CFeatureDictSet_Base() [2/2]

END_CLASS_INFO CFeatureDictSet_Base::CFeatureDictSet_Base ( void )

Definition at line 68 of file FeatureDictSet_.cpp.

References CFeatureDictSet_Base::m_set_State.

◆ CNode() [1/2]

CNode::CNode ( const CNode & value )

private

◆ CNode() [2/2]

CNode::CNode ( void )

inline

Definition at line 86 of file Node.hpp.

◆ CNode_Base() [1/2]

CNode_Base::CNode_Base ( const CNode_Base & )

private

◆ CNode_Base() [2/2]

END_CLASS_INFO CNode_Base::CNode_Base ( void )

Definition at line 88 of file Node_.cpp.

References CNode_Base::m_set_State.

◆ CNodeFeature() [1/2]

CNodeFeature::CNodeFeature ( const CNodeFeature & value )

private

◆ CNodeFeature() [2/2]

CNodeFeature::CNodeFeature ( void )

inline

Definition at line 86 of file NodeFeature.hpp.

◆ CNodeFeature_Base() [1/2]

CNodeFeature_Base::CNodeFeature_Base ( const CNodeFeature_Base & )

private

◆ CNodeFeature_Base() [2/2]

END_CLASS_INFO CNodeFeature_Base::CNodeFeature_Base ( void )

Definition at line 74 of file NodeFeature_.cpp.

References CNodeFeature_Base::m_set_State.

◆ CNodeFeatureSet() [1/2]

CNodeFeatureSet::CNodeFeatureSet ( const CNodeFeatureSet & value )

private

◆ CNodeFeatureSet() [2/2]

CNodeFeatureSet::CNodeFeatureSet ( void )

inline

Definition at line 86 of file NodeFeatureSet.hpp.

◆ CNodeFeatureSet_Base() [1/2]

CNodeFeatureSet_Base::CNodeFeatureSet_Base ( const CNodeFeatureSet_Base & )

private

◆ CNodeFeatureSet_Base() [2/2]

END_CLASS_INFO CNodeFeatureSet_Base::CNodeFeatureSet_Base ( void )

Definition at line 68 of file NodeFeatureSet_.cpp.

References CNodeFeatureSet_Base::m_set_State.

◆ CNodeSet() [1/2]

CNodeSet::CNodeSet ( const CNodeSet & value )

private

◆ CNodeSet() [2/2]

CNodeSet::CNodeSet ( void )

inline

Definition at line 86 of file NodeSet.hpp.

◆ CNodeSet_Base() [1/2]

CNodeSet_Base::CNodeSet_Base ( const CNodeSet_Base & )

private

◆ CNodeSet_Base() [2/2]

END_CLASS_INFO CNodeSet_Base::CNodeSet_Base ( void )

Definition at line 68 of file NodeSet_.cpp.

References CNodeSet_Base::m_set_State.

◆ DECLARE_INTERNAL_TYPE_INFO() [1/8]

CBioTreeContainer_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [2/8]

CDistanceMatrix_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [3/8]

CFeatureDescr_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [4/8]

CFeatureDictSet_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [5/8]

CNode_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [6/8]

CNodeFeature_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [7/8]

CNodeFeatureSet_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [8/8]

CNodeSet_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ Get() [1/3]

const CFeatureDictSet_Base::Tdata & CFeatureDictSet_Base::Get ( void ) const

inline

Get the member data.

Returns: Reference to the member data.

Definition at line 164 of file FeatureDictSet_.hpp.

References CFeatureDictSet_Base::m_data.

Referenced by CBioTreeSelection::CBioTreeSelection(), Convert_BioTreeContainer_Seq_id(), CTableDataBioTreeContainer::Init(), s_TestFeatureDict(), and s_TestResultTreeContainer().

◆ Get() [2/3]

const CNodeFeatureSet_Base::Tdata & CNodeFeatureSet_Base::Get ( void ) const

inline

Get the member data.

Returns: Reference to the member data.

Definition at line 164 of file NodeFeatureSet_.hpp.

References CNodeFeatureSet_Base::m_data.

Referenced by Convert_BioTreeContainer_Seq_id(), s_IsLeaf(), s_TestNode(), and CTableDataBioTreeContainer::x_GetNodeFeature().

◆ Get() [3/3]

const CNodeSet_Base::Tdata & CNodeSet_Base::Get ( void ) const

inline

Get the member data.

Returns: Reference to the member data.

Definition at line 164 of file NodeSet_.hpp.

References CNodeSet_Base::m_data.

Referenced by BOOST_AUTO_TEST_CASE(), CBioTreeSelection::CBioTreeSelection(), Convert_BioTreeContainer_Seq_id(), CBioTreeContainer::GetNodeCount(), CTableDataBioTreeContainer::Init(), MakeDistanceSensitiveBioTreeContainer(), and s_TestResultTreeContainer().

◆ GetDistances()

const CDistanceMatrix_Base::TDistances & CDistanceMatrix_Base::GetDistances ( void ) const

inline

Get the Distances member data.

Returns: Reference to the member data.

Definition at line 227 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_Distances.

Referenced by CDistanceMatrix::AsMatrix().

◆ GetFdict()

const CBioTreeContainer_Base::TFdict & CBioTreeContainer_Base::GetFdict ( void ) const

inline

Get the Fdict member data.

Returns: Reference to the member data.

Definition at line 390 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Fdict, and CBioTreeContainer_Base::ResetFdict().

Referenced by Convert_BioTreeContainer_Seq_id(), CTableDataBioTreeContainer::Init(), and s_TestResultTreeContainer().

◆ GetFeatureid()

CNodeFeature_Base::TFeatureid CNodeFeature_Base::GetFeatureid ( void ) const

inline

Get the Featureid member data.

Returns: Copy of the member data.

Definition at line 218 of file NodeFeature_.hpp.

References CNodeFeature_Base::CanGetFeatureid(), CNodeFeature_Base::m_Featureid, and CSerialObject::ThrowUnassigned().

◆ GetFeatures()

const CNode_Base::TFeatures & CNode_Base::GetFeatures ( void ) const

inline

Get the Features member data.

Returns: Reference to the member data.

Definition at line 346 of file Node_.hpp.

References CNode_Base::CanGetFeatures(), CNode_Base::m_Features, and CSerialObject::ThrowUnassigned().

Referenced by Convert_BioTreeContainer_Seq_id(), s_IsLeaf(), s_TestNode(), and CTableDataBioTreeContainer::x_GetNodeFeature().

◆ GetId() [1/2]

CFeatureDescr_Base::TId CFeatureDescr_Base::GetId ( void ) const

inline

Get the Id member data.

Returns: Copy of the member data.

Definition at line 220 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::CanGetId(), CFeatureDescr_Base::m_Id, and CSerialObject::ThrowUnassigned().

◆ GetId() [2/2]

CNode_Base::TId CNode_Base::GetId ( void ) const

inline

Get the Id member data.

Returns: Copy of the member data.

Definition at line 259 of file Node_.hpp.

References CNode_Base::CanGetId(), CNode_Base::m_Id, and CSerialObject::ThrowUnassigned().

Referenced by CTableDataBioTreeContainer::GetIntValue(), and CBioTreeContainer::GetLeafCount().

◆ GetLabel()

const CBioTreeContainer_Base::TLabel & CBioTreeContainer_Base::GetLabel ( void ) const

inline

Get the Label member data.

Returns: Reference to the member data.

Definition at line 450 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::CanGetLabel(), CBioTreeContainer_Base::m_Label, and CSerialObject::ThrowUnassigned().

Referenced by CAsnObjectLoader::LoadFromStream().

◆ GetLabels()

const CDistanceMatrix_Base::TLabels & CDistanceMatrix_Base::GetLabels ( void ) const

inline

Get the Labels member data.

Returns: Reference to the member data.

Definition at line 202 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_Labels.

Referenced by CDistanceMatrix::AsMatrix().

◆ GetName()

const CFeatureDescr_Base::TName & CFeatureDescr_Base::GetName ( void ) const

inline

Get the Name member data.

Returns: Reference to the member data.

Definition at line 260 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::CanGetName(), CFeatureDescr_Base::m_Name, and CSerialObject::ThrowUnassigned().

◆ GetNodes()

const CBioTreeContainer_Base::TNodes & CBioTreeContainer_Base::GetNodes ( void ) const

inline

Get the Nodes member data.

Returns: Reference to the member data.

Definition at line 420 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Nodes, and CBioTreeContainer_Base::ResetNodes().

Referenced by BOOST_AUTO_TEST_CASE(), Convert_BioTreeContainer_Seq_id(), CBioTreeContainer::GetLeafCount(), CBioTreeContainer::GetNodeCount(), CTableDataBioTreeContainer::Init(), MakeDistanceSensitiveBioTreeContainer(), and s_TestResultTreeContainer().

◆ GetParent()

CNode_Base::TParent CNode_Base::GetParent ( void ) const

inline

Get the Parent member data.

Returns: Copy of the member data.

Definition at line 306 of file Node_.hpp.

References CNode_Base::CanGetParent(), CNode_Base::m_Parent, and CSerialObject::ThrowUnassigned().

Referenced by CTableDataBioTreeContainer::GetIntValue(), and CBioTreeContainer::GetLeafCount().

◆ GetTreetype()

const CBioTreeContainer_Base::TTreetype & CBioTreeContainer_Base::GetTreetype ( void ) const

inline

Get the Treetype member data.

Returns: Reference to the member data.

Definition at line 343 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::CanGetTreetype(), CBioTreeContainer_Base::m_Treetype, and CSerialObject::ThrowUnassigned().

Referenced by CPhyTreeView::CommitTheChanges().

◆ GetUser()

const CBioTreeContainer_Base::TUser & CBioTreeContainer_Base::GetUser ( void ) const

inline

Get the User member data.

Returns: Reference to the member data.

Definition at line 497 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::CanGetUser(), CBioTreeContainer_Base::m_User, and CSerialObject::ThrowUnassigned().

◆ GetValue()

const CNodeFeature_Base::TValue & CNodeFeature_Base::GetValue ( void ) const

inline

Get the Value member data.

Returns: Reference to the member data.

Definition at line 258 of file NodeFeature_.hpp.

References CNodeFeature_Base::CanGetValue(), CNodeFeature_Base::m_Value, and CSerialObject::ThrowUnassigned().

◆ IsSet() [1/3]

bool CFeatureDictSet_Base::IsSet ( void ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CFeatureDescr > > Tdata'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 152 of file FeatureDictSet_.hpp.

References CFeatureDictSet_Base::m_set_State.

◆ IsSet() [2/3]

bool CNodeFeatureSet_Base::IsSet ( void ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CNodeFeature > > Tdata'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 152 of file NodeFeatureSet_.hpp.

References CNodeFeatureSet_Base::m_set_State.

◆ IsSet() [3/3]

bool CNodeSet_Base::IsSet ( void ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CNode > > Tdata'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 152 of file NodeSet_.hpp.

References CNodeSet_Base::m_set_State.

◆ IsSetDistances()

bool CDistanceMatrix_Base::IsSetDistances ( void ) const

inline

n(n-1)/2 pairwise distances (0, 1)...(0, n), (1, 2)...(1, n)...

Check if a value has been assigned to Distances data member.

Data member Distances is mandatory; its type is defined as 'typedef vector< double > TDistances'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 215 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_set_State.

◆ IsSetFdict()

bool CBioTreeContainer_Base::IsSetFdict ( void ) const

inline

features dictionary Check if a value has been assigned to Fdict data member.

Data member Fdict is mandatory; its type is defined as 'typedef CFeatureDictSet TFdict'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 378 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Fdict.

◆ IsSetFeatureid()

bool CNodeFeature_Base::IsSetFeatureid ( void ) const

inline

Check if a value has been assigned to Featureid data member.

Data member Featureid is mandatory; its type is defined as 'typedef int TFeatureid'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 199 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_set_State.

Referenced by CNodeFeature_Base::CanGetFeatureid(), and CNodeFeature_Base::SetFeatureid().

◆ IsSetFeatures()

bool CNode_Base::IsSetFeatures ( void ) const

inline

Check if a value has been assigned to Features data member.

Data member Features is optional; its type is defined as 'typedef CNodeFeatureSet TFeatures'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 334 of file Node_.hpp.

References CNode_Base::m_Features.

Referenced by CNode_Base::CanGetFeatures().

◆ IsSetId() [1/2]

bool CFeatureDescr_Base::IsSetId ( void ) const

inline

feature id Check if a value has been assigned to Id data member.

Data member Id is mandatory; its type is defined as 'typedef int TId'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 201 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_set_State.

Referenced by CFeatureDescr_Base::CanGetId(), and CFeatureDescr_Base::SetId().

◆ IsSetId() [2/2]

bool CNode_Base::IsSetId ( void ) const

inline

node uid Check if a value has been assigned to Id data member.

Data member Id is mandatory; its type is defined as 'typedef int TId'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 240 of file Node_.hpp.

References CNode_Base::m_set_State.

Referenced by CNode_Base::CanGetId(), and CNode_Base::SetId().

◆ IsSetLabel()

bool CBioTreeContainer_Base::IsSetLabel ( void ) const

inline

bio-tree label (short name) Check if a value has been assigned to Label data member.

Data member Label is optional; its type is defined as 'typedef string TLabel'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 438 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_set_State.

Referenced by CBioTreeContainer_Base::CanGetLabel(), CAsnObjectLoader::LoadFromStream(), and CBioTreeContainer_Base::SetLabel().

◆ IsSetLabels()

bool CDistanceMatrix_Base::IsSetLabels ( void ) const

inline

n labels Check if a value has been assigned to Labels data member.

Data member Labels is mandatory; its type is defined as 'typedef vector< string > TLabels'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 190 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_set_State.

◆ IsSetName()

bool CFeatureDescr_Base::IsSetName ( void ) const

inline

feature name Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 248 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_set_State.

Referenced by CFeatureDescr_Base::CanGetName(), and CFeatureDescr_Base::SetName().

◆ IsSetNodes()

bool CBioTreeContainer_Base::IsSetNodes ( void ) const

inline

set of nodes with encoded topology Check if a value has been assigned to Nodes data member.

Data member Nodes is mandatory; its type is defined as 'typedef CNodeSet TNodes'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 408 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Nodes.

Referenced by CBioTreeContainer::GetLeafCount(), and CBioTreeContainer::GetNodeCount().

◆ IsSetParent()

bool CNode_Base::IsSetParent ( void ) const

inline

parent node id Check if a value has been assigned to Parent data member.

Data member Parent is optional; its type is defined as 'typedef int TParent'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 287 of file Node_.hpp.

References CNode_Base::m_set_State.

Referenced by CNode_Base::CanGetParent(), CBioTreeContainer::GetLeafCount(), and CNode_Base::SetParent().

◆ IsSetTreetype()

bool CBioTreeContainer_Base::IsSetTreetype ( void ) const

inline

hint on what kind of tree this is Check if a value has been assigned to Treetype data member.

Data member Treetype is optional; its type is defined as 'typedef string TTreetype'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 331 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_set_State.

Referenced by CBioTreeContainer_Base::CanGetTreetype(), CPhyTreeView::CommitTheChanges(), and CBioTreeContainer_Base::SetTreetype().

◆ IsSetUser()

bool CBioTreeContainer_Base::IsSetUser ( void ) const

inline

user defined object Check if a value has been assigned to User data member.

Data member User is optional; its type is defined as 'typedef CUser_object TUser'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 485 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_User.

Referenced by CBioTreeContainer_Base::CanGetUser().

◆ IsSetValue()

bool CNodeFeature_Base::IsSetValue ( void ) const

inline

Check if a value has been assigned to Value data member.

Data member Value is mandatory; its type is defined as 'typedef CStringUTF8 TValue'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 246 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_set_State.

Referenced by CNodeFeature_Base::CanGetValue(), and CNodeFeature_Base::SetValue().

◆ operator const Tdata &() [1/3]

CFeatureDictSet_Base::operator const CFeatureDictSet_Base::Tdata & ( void ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file FeatureDictSet_.hpp.

◆ operator const Tdata &() [2/3]

CNodeFeatureSet_Base::operator const CNodeFeatureSet_Base::Tdata & ( void ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file NodeFeatureSet_.hpp.

◆ operator const Tdata &() [3/3]

CNodeSet_Base::operator const CNodeSet_Base::Tdata & ( void ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file NodeSet_.hpp.

◆ operator Tdata &() [1/3]

CFeatureDictSet_Base::operator CFeatureDictSet_Base::Tdata & ( void )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file FeatureDictSet_.hpp.

◆ operator Tdata &() [2/3]

CNodeFeatureSet_Base::operator CNodeFeatureSet_Base::Tdata & ( void )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file NodeFeatureSet_.hpp.

◆ operator Tdata &() [3/3]

CNodeSet_Base::operator CNodeSet_Base::Tdata & ( void )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file NodeSet_.hpp.

◆ operator=() [1/14]

CBioTreeContainer_Base& CBioTreeContainer_Base::operator= ( const CBioTreeContainer_Base & )

private

◆ operator=() [2/14]

CDistanceMatrix_Base& CDistanceMatrix_Base::operator= ( const CDistanceMatrix_Base & )

private

◆ operator=() [3/14]

CFeatureDescr& CFeatureDescr::operator= ( const CFeatureDescr & value )

private

◆ operator=() [4/14]

CFeatureDescr_Base& CFeatureDescr_Base::operator= ( const CFeatureDescr_Base & )

private

◆ operator=() [5/14]

CFeatureDictSet& CFeatureDictSet::operator= ( const CFeatureDictSet & value )

private

◆ operator=() [6/14]

CFeatureDictSet_Base& CFeatureDictSet_Base::operator= ( const CFeatureDictSet_Base & )

private

◆ operator=() [7/14]

CNode& CNode::operator= ( const CNode & value )

private

◆ operator=() [8/14]

CNode_Base& CNode_Base::operator= ( const CNode_Base & )

private

◆ operator=() [9/14]

CNodeFeature& CNodeFeature::operator= ( const CNodeFeature & value )

private

◆ operator=() [10/14]

CNodeFeature_Base& CNodeFeature_Base::operator= ( const CNodeFeature_Base & )

private

◆ operator=() [11/14]

CNodeFeatureSet& CNodeFeatureSet::operator= ( const CNodeFeatureSet & value )

private

◆ operator=() [12/14]

CNodeFeatureSet_Base& CNodeFeatureSet_Base::operator= ( const CNodeFeatureSet_Base & )

private

◆ operator=() [13/14]

CNodeSet& CNodeSet::operator= ( const CNodeSet & value )

private

◆ operator=() [14/14]

CNodeSet_Base& CNodeSet_Base::operator= ( const CNodeSet_Base & )

private

◆ Reset() [1/8]

void CBioTreeContainer_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 110 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::ResetFdict(), CBioTreeContainer_Base::ResetLabel(), CBioTreeContainer_Base::ResetNodes(), CBioTreeContainer_Base::ResetTreetype(), and CBioTreeContainer_Base::ResetUser().

Referenced by CPhyTreeView::CommitTheChanges().

◆ Reset() [2/8]

void CDistanceMatrix_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 62 of file DistanceMatrix_.cpp.

References CDistanceMatrix_Base::ResetDistances(), and CDistanceMatrix_Base::ResetLabels().

◆ Reset() [3/8]

void CFeatureDescr_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 56 of file FeatureDescr_.cpp.

References CFeatureDescr_Base::ResetId(), and CFeatureDescr_Base::ResetName().

◆ Reset() [4/8]

void CFeatureDictSet_Base::Reset ( void )

Reset data member.

Definition at line 51 of file FeatureDictSet_.cpp.

References CFeatureDictSet_Base::m_data, and CFeatureDictSet_Base::m_set_State.

Referenced by CChangePhyloPropertyCmd::PerformFeatureDictEdit().

◆ Reset() [5/8]

void CNode_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 68 of file Node_.cpp.

References CNode_Base::ResetFeatures(), CNode_Base::ResetId(), and CNode_Base::ResetParent().

◆ Reset() [6/8]

void CNodeFeature_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 56 of file NodeFeature_.cpp.

References CNodeFeature_Base::ResetFeatureid(), and CNodeFeature_Base::ResetValue().

◆ Reset() [7/8]

void CNodeFeatureSet_Base::Reset ( void )

Reset data member.

Definition at line 51 of file NodeFeatureSet_.cpp.

References CNodeFeatureSet_Base::m_data, and CNodeFeatureSet_Base::m_set_State.

◆ Reset() [8/8]

void CNodeSet_Base::Reset ( void )

Reset data member.

Definition at line 51 of file NodeSet_.cpp.

References CNodeSet_Base::m_data, and CNodeSet_Base::m_set_State.

◆ ResetDistances()

void CDistanceMatrix_Base::ResetDistances ( void )

Reset Distances data member.

Definition at line 56 of file DistanceMatrix_.cpp.

References CDistanceMatrix_Base::m_Distances, and CDistanceMatrix_Base::m_set_State.

Referenced by CDistanceMatrix::FromMatrix(), and CDistanceMatrix_Base::Reset().

◆ ResetFdict()

void CBioTreeContainer_Base::ResetFdict ( void )

Reset Fdict data member.

Definition at line 59 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_Fdict.

Referenced by CBioTreeContainer_Base::CBioTreeContainer_Base(), CBioTreeContainer_Base::GetFdict(), CBioTreeContainer_Base::Reset(), and CBioTreeContainer_Base::SetFdict().

◆ ResetFeatureid()

void CNodeFeature_Base::ResetFeatureid ( void )

inline

Reset Featureid data member.

Definition at line 211 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_Featureid, and CNodeFeature_Base::m_set_State.

Referenced by CNodeFeature_Base::Reset().

◆ ResetFeatures()

void CNode_Base::ResetFeatures ( void )

Reset Features data member.

Definition at line 51 of file Node_.cpp.

References CNode_Base::m_Features.

Referenced by CNode_Base::Reset().

◆ ResetId() [1/2]

void CFeatureDescr_Base::ResetId ( void )

inline

Reset Id data member.

Definition at line 213 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_Id, and CFeatureDescr_Base::m_set_State.

Referenced by CFeatureDescr_Base::Reset().

◆ ResetId() [2/2]

void CNode_Base::ResetId ( void )

inline

Reset Id data member.

Definition at line 252 of file Node_.hpp.

References CNode_Base::m_Id, and CNode_Base::m_set_State.

Referenced by CNode_Base::Reset().

◆ ResetLabel()

void CBioTreeContainer_Base::ResetLabel ( void )

Reset Label data member.

Definition at line 87 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_Label, and CBioTreeContainer_Base::m_set_State.

Referenced by CBioTreeContainer_Base::Reset().

◆ ResetLabels()

void CDistanceMatrix_Base::ResetLabels ( void )

Reset Labels data member.

Definition at line 50 of file DistanceMatrix_.cpp.

References CDistanceMatrix_Base::m_Labels, and CDistanceMatrix_Base::m_set_State.

Referenced by CDistanceMatrix::Read(), and CDistanceMatrix_Base::Reset().

◆ ResetName()

void CFeatureDescr_Base::ResetName ( void )

Reset Name data member.

Definition at line 50 of file FeatureDescr_.cpp.

References CFeatureDescr_Base::m_Name, and CFeatureDescr_Base::m_set_State.

Referenced by CFeatureDescr_Base::Reset().

◆ ResetNodes()

void CBioTreeContainer_Base::ResetNodes ( void )

Reset Nodes data member.

Definition at line 73 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_Nodes.

Referenced by CBioTreeContainer_Base::CBioTreeContainer_Base(), CBioTreeContainer_Base::GetNodes(), CBioTreeContainer_Base::Reset(), and CBioTreeContainer_Base::SetNodes().

◆ ResetParent()

void CNode_Base::ResetParent ( void )

inline

Reset Parent data member.

Definition at line 299 of file Node_.hpp.

References CNode_Base::m_Parent, and CNode_Base::m_set_State.

Referenced by CNode_Base::Reset().

◆ ResetTreetype()

void CBioTreeContainer_Base::ResetTreetype ( void )

Reset Treetype data member.

Definition at line 53 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_set_State, and CBioTreeContainer_Base::m_Treetype.

Referenced by CBioTreeContainer_Base::Reset().

◆ ResetUser()

void CBioTreeContainer_Base::ResetUser ( void )

Reset User data member.

Definition at line 93 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_User.

Referenced by CBioTreeContainer_Base::Reset().

◆ ResetValue()

void CNodeFeature_Base::ResetValue ( void )

Reset Value data member.

Definition at line 50 of file NodeFeature_.cpp.

References CNodeFeature_Base::m_set_State, and CNodeFeature_Base::m_Value.

Referenced by CNodeFeature_Base::Reset().

◆ Set() [1/3]

CFeatureDictSet_Base::Tdata & CFeatureDictSet_Base::Set ( void )

inline

Assign a value to data member.

Returns: Reference to the data value.

Definition at line 170 of file FeatureDictSet_.hpp.

References CFeatureDictSet_Base::m_data, and CFeatureDictSet_Base::m_set_State.

Referenced by CChangePhyloExpandCollapseCmd::PerformEdit(), and CChangePhyloPropertyCmd::PerformFeatureDictEdit().

◆ Set() [2/3]

CNodeFeatureSet_Base::Tdata & CNodeFeatureSet_Base::Set ( void )

inline

Assign a value to data member.

Returns: Reference to the data value.

Definition at line 170 of file NodeFeatureSet_.hpp.

References CNodeFeatureSet_Base::m_data, and CNodeFeatureSet_Base::m_set_State.

◆ Set() [3/3]

CNodeSet_Base::Tdata & CNodeSet_Base::Set ( void )

inline

Assign a value to data member.

Returns: Reference to the data value.

Definition at line 170 of file NodeSet_.hpp.

References CNodeSet_Base::m_data, and CNodeSet_Base::m_set_State.

◆ SetDistances()

CDistanceMatrix_Base::TDistances & CDistanceMatrix_Base::SetDistances ( void )

inline

Assign a value to Distances data member.

Returns: Reference to the data value.

Definition at line 233 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_Distances, and CDistanceMatrix_Base::m_set_State.

Referenced by CDistanceMatrix::FromMatrix().

◆ SetFdict() [1/2]

void CBioTreeContainer_Base::SetFdict ( CBioTreeContainer_Base::TFdict & value )

Assign a value to Fdict data member.

Parameters

value Reference to value.

Definition at line 68 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_Fdict, and rapidjson::value.

Referenced by MakeBioTreeContainer(), MakeDistanceSensitiveBioTreeContainer(), CChangePhyloExpandCollapseCmd::PerformEdit(), CChangePhyloPropertyCmd::PerformFeatureDictEdit(), s_AddFeatureDescr(), CPhyTreeFormatter::x_AddFeatureDesc(), and CMSAToolJob::x_AddTreeProjectItem().

◆ SetFdict() [2/2]

CBioTreeContainer_Base::TFdict & CBioTreeContainer_Base::SetFdict ( void )

inline

Assign a value to Fdict data member.

Returns: Reference to the data value.

Definition at line 399 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Fdict, and CBioTreeContainer_Base::ResetFdict().

◆ SetFeatureid() [1/2]

void CNodeFeature_Base::SetFeatureid ( CNodeFeature_Base::TFeatureid value )

inline

Assign a value to Featureid data member.

Parameters

value Value to assign

Definition at line 227 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_Featureid, CNodeFeature_Base::m_set_State, and rapidjson::value.

◆ SetFeatureid() [2/2]

CNodeFeature_Base::TFeatureid & CNodeFeature_Base::SetFeatureid ( void )

inline

Assign a value to Featureid data member.

Returns: Reference to the data value.

Definition at line 234 of file NodeFeature_.hpp.

References CNodeFeature_Base::IsSetFeatureid(), CNodeFeature_Base::m_Featureid, CNodeFeature_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetFeatures() [1/2]

void CNode_Base::SetFeatures ( CNode_Base::TFeatures & value )

Assign a value to Features data member.

Parameters

value Reference to value.

Definition at line 56 of file Node_.cpp.

References CNode_Base::m_Features, and rapidjson::value.

Referenced by s_AddFeature(), and CPhyTreeFormatter::x_AddFeature().

◆ SetFeatures() [2/2]

CNode_Base::TFeatures & CNode_Base::SetFeatures ( void )

Assign a value to Features data member.

Returns: Reference to the data value.

Definition at line 61 of file Node_.cpp.

References CNode_Base::m_Features.

◆ SetId() [1/4]

void CFeatureDescr_Base::SetId ( CFeatureDescr_Base::TId value )

inline

Assign a value to Id data member.

Parameters

value Value to assign

Definition at line 229 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_Id, CFeatureDescr_Base::m_set_State, and rapidjson::value.

◆ SetId() [2/4]

void CNode_Base::SetId ( CNode_Base::TId value )

inline

Assign a value to Id data member.

Parameters

value Value to assign

Definition at line 268 of file Node_.hpp.

References CNode_Base::m_Id, CNode_Base::m_set_State, and rapidjson::value.

◆ SetId() [3/4]

CFeatureDescr_Base::TId & CFeatureDescr_Base::SetId ( void )

inline

Assign a value to Id data member.

Returns: Reference to the data value.

Definition at line 236 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::IsSetId(), CFeatureDescr_Base::m_Id, CFeatureDescr_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetId() [4/4]

CNode_Base::TId & CNode_Base::SetId ( void )

inline

Assign a value to Id data member.

Returns: Reference to the data value.

Definition at line 275 of file Node_.hpp.

References CNode_Base::IsSetId(), CNode_Base::m_Id, CNode_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetLabel() [1/3]

void CBioTreeContainer_Base::SetLabel ( const TLabel & value )

inline

Assign a value to Label data member.

Parameters

value Value to assign

Definition at line 459 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Label, CBioTreeContainer_Base::m_set_State, and rapidjson::value.

Referenced by CAsnObjectLoader::LoadFromStream().

◆ SetLabel() [2/3]

void CBioTreeContainer_Base::SetLabel ( CBioTreeContainer_Base::TLabel && value )

inline

Definition at line 466 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Label, CBioTreeContainer_Base::m_set_State, and rapidjson::value.

◆ SetLabel() [3/3]

CBioTreeContainer_Base::TLabel & CBioTreeContainer_Base::SetLabel ( void )

inline

Assign a value to Label data member.

Returns: Reference to the data value.

Definition at line 473 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::IsSetLabel(), CBioTreeContainer_Base::m_Label, CBioTreeContainer_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetLabels()

CDistanceMatrix_Base::TLabels & CDistanceMatrix_Base::SetLabels ( void )

inline

Assign a value to Labels data member.

Returns: Reference to the data value.

Definition at line 208 of file DistanceMatrix_.hpp.

References CDistanceMatrix_Base::m_Labels, and CDistanceMatrix_Base::m_set_State.

Referenced by CDistanceMatrix::Read().

◆ SetName() [1/3]

void CFeatureDescr_Base::SetName ( const TName & value )

inline

Assign a value to Name data member.

Parameters

value Value to assign

Definition at line 269 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_Name, CFeatureDescr_Base::m_set_State, and rapidjson::value.

◆ SetName() [2/3]

void CFeatureDescr_Base::SetName ( CFeatureDescr_Base::TName && value )

inline

Definition at line 276 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::m_Name, CFeatureDescr_Base::m_set_State, and rapidjson::value.

◆ SetName() [3/3]

CFeatureDescr_Base::TName & CFeatureDescr_Base::SetName ( void )

inline

Assign a value to Name data member.

Returns: Reference to the data value.

Definition at line 283 of file FeatureDescr_.hpp.

References CFeatureDescr_Base::IsSetName(), CFeatureDescr_Base::m_Name, CFeatureDescr_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetNodes() [1/2]

void CBioTreeContainer_Base::SetNodes ( CBioTreeContainer_Base::TNodes & value )

Assign a value to Nodes data member.

Parameters

value Reference to value.

Definition at line 82 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_Nodes, and rapidjson::value.

Referenced by MakeBioTreeContainer(), MakeDistanceSensitiveBioTreeContainer(), CChangePhyloPropertyCmd::PerformEdit(), CChangePhyloExpandCollapseCmd::PerformEdit(), s_AddNodeToBtc(), CMSAToolJob::x_AddTreeProjectItem(), CTaxTreeToolJob::x_CreateProjectItems(), CTreeBuilderJob::x_CreateProjectItems(), CPhyTreeFormatter::x_InitTreeFeatures(), CPhyTreeFormatter::x_InitTreeLabels(), and CPhyTreeFormatter::x_MarkLeavesBySeqId().

◆ SetNodes() [2/2]

CBioTreeContainer_Base::TNodes & CBioTreeContainer_Base::SetNodes ( void )

inline

Assign a value to Nodes data member.

Returns: Reference to the data value.

Definition at line 429 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_Nodes, and CBioTreeContainer_Base::ResetNodes().

◆ SetParent() [1/2]

void CNode_Base::SetParent ( CNode_Base::TParent value )

inline

Assign a value to Parent data member.

Parameters

value Value to assign

Definition at line 315 of file Node_.hpp.

References CNode_Base::m_Parent, CNode_Base::m_set_State, and rapidjson::value.

◆ SetParent() [2/2]

CNode_Base::TParent & CNode_Base::SetParent ( void )

inline

Assign a value to Parent data member.

Returns: Reference to the data value.

Definition at line 322 of file Node_.hpp.

References CNode_Base::IsSetParent(), CNode_Base::m_Parent, CNode_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetTreetype() [1/3]

void CBioTreeContainer_Base::SetTreetype ( const TTreetype & value )

inline

Assign a value to Treetype data member.

Parameters

value Value to assign

Definition at line 352 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_set_State, CBioTreeContainer_Base::m_Treetype, and rapidjson::value.

Referenced by CPhyTreeView::CommitTheChanges(), CMSAToolJob::x_AddTreeProjectItem(), CTaxTreeToolJob::x_CreateProjectItems(), and CTreeBuilderJob::x_CreateProjectItems().

◆ SetTreetype() [2/3]

void CBioTreeContainer_Base::SetTreetype ( CBioTreeContainer_Base::TTreetype && value )

inline

Definition at line 359 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::m_set_State, CBioTreeContainer_Base::m_Treetype, and rapidjson::value.

◆ SetTreetype() [3/3]

CBioTreeContainer_Base::TTreetype & CBioTreeContainer_Base::SetTreetype ( void )

inline

Assign a value to Treetype data member.

Returns: Reference to the data value.

Definition at line 366 of file BioTreeContainer_.hpp.

References CBioTreeContainer_Base::IsSetTreetype(), CBioTreeContainer_Base::m_set_State, CBioTreeContainer_Base::m_Treetype, and CSerialObject::UnassignedString().

◆ SetUser() [1/2]

void CBioTreeContainer_Base::SetUser ( CBioTreeContainer_Base::TUser & value )

Assign a value to User data member.

Parameters

value Reference to value.

Definition at line 98 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_User, and rapidjson::value.

Referenced by CPhyTreeView::OnSomethingEdited(), and CChangePhyloSelectionSetCmd::PerformEdit().

◆ SetUser() [2/2]

CBioTreeContainer_Base::TUser & CBioTreeContainer_Base::SetUser ( void )

Assign a value to User data member.

Returns: Reference to the data value.

Definition at line 103 of file BioTreeContainer_.cpp.

References CBioTreeContainer_Base::m_User.

◆ SetValue() [1/3]

void CNodeFeature_Base::SetValue ( const TValue & value )

inline

Assign a value to Value data member.

Parameters

value Value to assign

Definition at line 267 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_set_State, CNodeFeature_Base::m_Value, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE().

◆ SetValue() [2/3]

void CNodeFeature_Base::SetValue ( CNodeFeature_Base::TValue && value )

inline

Definition at line 274 of file NodeFeature_.hpp.

References CNodeFeature_Base::m_set_State, CNodeFeature_Base::m_Value, and rapidjson::value.

◆ SetValue() [3/3]

CNodeFeature_Base::TValue & CNodeFeature_Base::SetValue ( void )

inline

Assign a value to Value data member.

Returns: Reference to the data value.

Definition at line 281 of file NodeFeature_.hpp.

References CNodeFeature_Base::IsSetValue(), CNodeFeature_Base::m_set_State, CNodeFeature_Base::m_Value, and CSerialObject::UnassignedStringUTF8().

◆ ~CBioTreeContainer_Base()

CBioTreeContainer_Base::~CBioTreeContainer_Base ( void )

virtual

Definition at line 144 of file BioTreeContainer_.cpp.

◆ ~CDistanceMatrix_Base()

CDistanceMatrix_Base::~CDistanceMatrix_Base ( void )

virtual

Definition at line 86 of file DistanceMatrix_.cpp.

◆ ~CFeatureDescr()

CFeatureDescr::~CFeatureDescr ( void )

Definition at line 50 of file FeatureDescr.cpp.

◆ ~CFeatureDescr_Base()

CFeatureDescr_Base::~CFeatureDescr_Base ( void )

virtual

Definition at line 81 of file FeatureDescr_.cpp.

◆ ~CFeatureDictSet()

CFeatureDictSet::~CFeatureDictSet ( void )

Definition at line 50 of file FeatureDictSet.cpp.

◆ ~CFeatureDictSet_Base()

CFeatureDictSet_Base::~CFeatureDictSet_Base ( void )

virtual

Definition at line 74 of file FeatureDictSet_.cpp.

◆ ~CNode()

CNode::~CNode ( void )

Definition at line 50 of file Node.cpp.

◆ ~CNode_Base()

CNode_Base::~CNode_Base ( void )

virtual

Definition at line 95 of file Node_.cpp.

◆ ~CNodeFeature()

CNodeFeature::~CNodeFeature ( void )

Definition at line 50 of file NodeFeature.cpp.

◆ ~CNodeFeature_Base()

CNodeFeature_Base::~CNodeFeature_Base ( void )

virtual

Definition at line 81 of file NodeFeature_.cpp.

◆ ~CNodeFeatureSet()

CNodeFeatureSet::~CNodeFeatureSet ( void )

Definition at line 50 of file NodeFeatureSet.cpp.

◆ ~CNodeFeatureSet_Base()

CNodeFeatureSet_Base::~CNodeFeatureSet_Base ( void )

virtual

Definition at line 74 of file NodeFeatureSet_.cpp.

◆ ~CNodeSet()

CNodeSet::~CNodeSet ( void )

Definition at line 50 of file NodeSet.cpp.

◆ ~CNodeSet_Base()

CNodeSet_Base::~CNodeSet_Base ( void )

virtual

Definition at line 74 of file NodeSet_.cpp.

Variable Documentation

◆ m_data [1/3]

list< CRef< CFeatureDescr > > CFeatureDictSet_Base::m_data

private

Definition at line 139 of file FeatureDictSet_.hpp.

Referenced by CFeatureDictSet_Base::Get(), CFeatureDictSet_Base::Reset(), and CFeatureDictSet_Base::Set().

◆ m_data [2/3]

list< CRef< CNodeFeature > > CNodeFeatureSet_Base::m_data

private

Definition at line 139 of file NodeFeatureSet_.hpp.

Referenced by CNodeFeatureSet_Base::Get(), CNodeFeatureSet_Base::Reset(), and CNodeFeatureSet_Base::Set().

◆ m_data [3/3]

list< CRef< CNode > > CNodeSet_Base::m_data

private

Definition at line 139 of file NodeSet_.hpp.

Referenced by CNodeSet_Base::Get(), CNodeSet_Base::Reset(), and CNodeSet_Base::Set().

◆ m_Distances

vector< double > CDistanceMatrix_Base::m_Distances

private

Definition at line 177 of file DistanceMatrix_.hpp.

Referenced by CDistanceMatrix_Base::GetDistances(), CDistanceMatrix_Base::ResetDistances(), and CDistanceMatrix_Base::SetDistances().

◆ m_Fdict

CRef< TFdict > CBioTreeContainer_Base::m_Fdict

private

Definition at line 315 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::GetFdict(), CBioTreeContainer_Base::IsSetFdict(), CBioTreeContainer_Base::ResetFdict(), and CBioTreeContainer_Base::SetFdict().

◆ m_Featureid

int CNodeFeature_Base::m_Featureid

private

Definition at line 185 of file NodeFeature_.hpp.

Referenced by CNodeFeature_Base::GetFeatureid(), CNodeFeature_Base::ResetFeatureid(), and CNodeFeature_Base::SetFeatureid().

◆ m_Features

CRef< TFeatures > CNode_Base::m_Features

private

Definition at line 227 of file Node_.hpp.

Referenced by CNode_Base::GetFeatures(), CNode_Base::IsSetFeatures(), CNode_Base::ResetFeatures(), and CNode_Base::SetFeatures().

◆ m_Id [1/2]

int CFeatureDescr_Base::m_Id

private

Definition at line 187 of file FeatureDescr_.hpp.

Referenced by CFeatureDescr_Base::GetId(), CFeatureDescr_Base::ResetId(), and CFeatureDescr_Base::SetId().

◆ m_Id [2/2]

int CNode_Base::m_Id

private

Definition at line 225 of file Node_.hpp.

Referenced by CNode_Base::GetId(), CNode_Base::ResetId(), and CNode_Base::SetId().

◆ m_Label

string CBioTreeContainer_Base::m_Label

private

Definition at line 317 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::GetLabel(), CBioTreeContainer_Base::ResetLabel(), and CBioTreeContainer_Base::SetLabel().

◆ m_Labels

vector< string > CDistanceMatrix_Base::m_Labels

private

Definition at line 176 of file DistanceMatrix_.hpp.

Referenced by CDistanceMatrix_Base::GetLabels(), CDistanceMatrix_Base::ResetLabels(), and CDistanceMatrix_Base::SetLabels().

◆ m_Name

string CFeatureDescr_Base::m_Name

private

Definition at line 188 of file FeatureDescr_.hpp.

Referenced by CFeatureDescr_Base::GetName(), CFeatureDescr_Base::ResetName(), and CFeatureDescr_Base::SetName().

◆ m_Nodes

CRef< TNodes > CBioTreeContainer_Base::m_Nodes

private

Definition at line 316 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::GetNodes(), CBioTreeContainer_Base::IsSetNodes(), CBioTreeContainer_Base::ResetNodes(), and CBioTreeContainer_Base::SetNodes().

◆ m_Parent

int CNode_Base::m_Parent

private

Definition at line 226 of file Node_.hpp.

Referenced by CDockLayoutTree::CNode::GetParent(), CNode_Base::GetParent(), CNode_Base::ResetParent(), and CNode_Base::SetParent().

◆ m_set_State [1/8]

Uint4 CBioTreeContainer_Base::m_set_State[1]

private

Definition at line 313 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::CBioTreeContainer_Base(), CBioTreeContainer_Base::IsSetLabel(), CBioTreeContainer_Base::IsSetTreetype(), CBioTreeContainer_Base::ResetLabel(), CBioTreeContainer_Base::ResetTreetype(), CBioTreeContainer_Base::SetLabel(), and CBioTreeContainer_Base::SetTreetype().

◆ m_set_State [2/8]

Uint4 CDistanceMatrix_Base::m_set_State[1]

private

Definition at line 175 of file DistanceMatrix_.hpp.

Referenced by CDistanceMatrix_Base::CDistanceMatrix_Base(), CDistanceMatrix_Base::IsSetDistances(), CDistanceMatrix_Base::IsSetLabels(), CDistanceMatrix_Base::ResetDistances(), CDistanceMatrix_Base::ResetLabels(), CDistanceMatrix_Base::SetDistances(), and CDistanceMatrix_Base::SetLabels().

◆ m_set_State [3/8]

Uint4 CFeatureDescr_Base::m_set_State[1]

private

Definition at line 186 of file FeatureDescr_.hpp.

Referenced by CFeatureDescr_Base::CFeatureDescr_Base(), CFeatureDescr_Base::IsSetId(), CFeatureDescr_Base::IsSetName(), CFeatureDescr_Base::ResetId(), CFeatureDescr_Base::ResetName(), CFeatureDescr_Base::SetId(), and CFeatureDescr_Base::SetName().

◆ m_set_State [4/8]

Uint4 CFeatureDictSet_Base::m_set_State[1]

private

Definition at line 138 of file FeatureDictSet_.hpp.

Referenced by CFeatureDictSet_Base::CFeatureDictSet_Base(), CFeatureDictSet_Base::IsSet(), CFeatureDictSet_Base::Reset(), and CFeatureDictSet_Base::Set().

◆ m_set_State [5/8]

Uint4 CNode_Base::m_set_State[1]

private

Definition at line 224 of file Node_.hpp.

Referenced by CNode_Base::CNode_Base(), CNode_Base::IsSetId(), CNode_Base::IsSetParent(), CNode_Base::ResetId(), CNode_Base::ResetParent(), CNode_Base::SetId(), and CNode_Base::SetParent().

◆ m_set_State [6/8]

Uint4 CNodeFeature_Base::m_set_State[1]

private

Definition at line 184 of file NodeFeature_.hpp.

Referenced by CNodeFeature_Base::CNodeFeature_Base(), CNodeFeature_Base::IsSetFeatureid(), CNodeFeature_Base::IsSetValue(), CNodeFeature_Base::ResetFeatureid(), CNodeFeature_Base::ResetValue(), CNodeFeature_Base::SetFeatureid(), and CNodeFeature_Base::SetValue().

◆ m_set_State [7/8]

Uint4 CNodeFeatureSet_Base::m_set_State[1]

private

Definition at line 138 of file NodeFeatureSet_.hpp.

Referenced by CNodeFeatureSet_Base::CNodeFeatureSet_Base(), CNodeFeatureSet_Base::IsSet(), CNodeFeatureSet_Base::Reset(), and CNodeFeatureSet_Base::Set().

◆ m_set_State [8/8]

Uint4 CNodeSet_Base::m_set_State[1]

private

Definition at line 138 of file NodeSet_.hpp.

Referenced by CNodeSet_Base::CNodeSet_Base(), CNodeSet_Base::IsSet(), CNodeSet_Base::Reset(), and CNodeSet_Base::Set().

◆ m_Treetype

string CBioTreeContainer_Base::m_Treetype

private

Definition at line 314 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::GetTreetype(), CBioTreeContainer_Base::ResetTreetype(), and CBioTreeContainer_Base::SetTreetype().

◆ m_User

CRef< TUser > CBioTreeContainer_Base::m_User

private

Definition at line 318 of file BioTreeContainer_.hpp.

Referenced by CBioTreeContainer_Base::GetUser(), CBioTreeContainer_Base::IsSetUser(), CBioTreeContainer_Base::ResetUser(), and CBioTreeContainer_Base::SetUser().

◆ m_Value

CStringUTF8 CNodeFeature_Base::m_Value

private

Definition at line 186 of file NodeFeature_.hpp.

Referenced by CNodeFeature_Base::GetValue(), CNodeFeature_Base::ResetValue(), and CNodeFeature_Base::SetValue().

Classes

Typedefs

Enumerations

Functions

Variables

Detailed Description

Typedef Documentation

◆ Tdata [1/3]

◆ Tdata [2/3]

◆ Tdata [3/3]

◆ TDistances

◆ TFdict

◆ TFeatureid

◆ TFeatures

◆ TId [1/2]

◆ TId [2/2]

◆ TLabel

◆ TLabels

◆ TmemberIndex [1/5]

◆ TmemberIndex [2/5]

◆ TmemberIndex [3/5]

◆ TmemberIndex [4/5]

◆ TmemberIndex [5/5]

◆ TName

◆ TNodes

◆ Tparent [1/14]

◆ Tparent [2/14]

◆ Tparent [3/14]

◆ Tparent [4/14]

◆ Tparent [5/14]

◆ Tparent [6/14]

◆ Tparent [7/14]

◆ Tparent [8/14]

◆ TParent

◆ Tparent [9/14]

◆ Tparent [10/14]

◆ Tparent [11/14]

◆ Tparent [12/14]

◆ Tparent [13/14]

◆ Tparent [14/14]

◆ TTreetype

◆ TUser

◆ TValue

Enumeration Type Documentation

◆ E_memberIndex [1/5]

◆ E_memberIndex [2/5]

◆ E_memberIndex [3/5]

◆ E_memberIndex [4/5]

◆ E_memberIndex [5/5]

Function Documentation

◆ CanGet() [1/3]

◆ CanGet() [2/3]

◆ CanGet() [3/3]

◆ CanGetDistances()

◆ CanGetFdict()

◆ CanGetFeatureid()

◆ CanGetFeatures()

◆ CanGetId() [1/2]

◆ CanGetId() [2/2]

◆ CanGetLabel()

◆ CanGetLabels()

◆ CanGetName()

◆ CanGetNodes()

◆ CanGetParent()

◆ CanGetTreetype()

◆ CanGetUser()

◆ CanGetValue()

◆ CBioTreeContainer_Base() [1/2]

◆ CBioTreeContainer_Base() [2/2]

◆ CDistanceMatrix_Base() [1/2]

◆ CDistanceMatrix_Base() [2/2]

◆ CFeatureDescr() [1/2]

◆ CFeatureDescr() [2/2]

◆ CFeatureDescr_Base() [1/2]

◆ CFeatureDescr_Base() [2/2]

◆ CFeatureDictSet() [1/2]

◆ CFeatureDictSet() [2/2]

◆ CFeatureDictSet_Base() [1/2]

◆ CFeatureDictSet_Base() [2/2]

◆ CNode() [1/2]