NCBI C++ ToolKit
Classes | Typedefs | Enumerations | Enumerator | Functions | Variables
Code generated by DATATOOL from 'blast.asn' (module 'NCBI-Blast4')
+ Collaboration diagram for Code generated by DATATOOL from 'blast.asn' (module 'NCBI-Blast4'):

Classes

class  CBlast4_get_search_results_reply
 CBlast4_get_search_results_reply –. More...
 
class  CBlast4_get_search_results_reply_Base
 CBlast4_get_search_results_reply_Base –. More...
 
class  CBlast4_get_search_results_request
 CBlast4_get_search_results_request –. More...
 
class  CBlast4_get_search_results_request_Base
 CBlast4_get_search_results_request_Base –. More...
 
class  CBlast4_get_search_status_reply
 CBlast4_get_search_status_reply –. More...
 
class  CBlast4_get_search_status_reply_Base
 Reply to retrieve the status of a given search. More...
 
class  CBlast4_get_search_status_request
 CBlast4_get_search_status_request –. More...
 
class  CBlast4_get_search_status_request_Base
 Request to retrieve the status of a given search. More...
 
class  CBlast4_get_search_strategy_reply
 CBlast4_get_search_strategy_reply –. More...
 
class  CBlast4_get_search_strategy_reply_Base
 Return the search strategy (i.e. More...
 
class  CBlast4_get_search_strategy_request
 CBlast4_get_search_strategy_request –. More...
 
class  CBlast4_get_search_strategy_request_Base
 Fetch the search strategy (i.e. More...
 
class  CBlast4_get_windowmasked_taxids_reply
 CBlast4_get_windowmasked_taxids_reply –. More...
 
class  CBlast4_get_windowmasked_taxids_reply_Base
 CBlast4_get_windowmasked_taxids_reply_Base –. More...
 
class  CBlast4_alignments_for_query
 CBlast4_alignments_for_query –. More...
 
class  CBlast4_alignments_for_query_Base
 Alignments for one query, compiled from the raw SeqAlign results. More...
 
class  CBlast4_archive
 CBlast4_archive –. More...
 
class  CBlast4_archive_Base
 An archive format for results. More...
 
class  CBlast4_cutoff
 CBlast4_cutoff –. More...
 
class  CBlast4_cutoff_Base
 Other types in alphabetical order. More...
 
class  CBlast4_database_Base
 CBlast4_database_Base –. More...
 
class  CBlast4_database_info
 CBlast4_database_info –. More...
 
class  CBlast4_database_info_Base
 CBlast4_database_info_Base –. More...
 
class  CBlast4_error
 CBlast4_error –. More...
 
class  CBlast4_error_Base
 Errors. More...
 
class  CBlast4_finish_params_reply
 CBlast4_finish_params_reply –. More...
 
class  CBlast4_finish_params_reply_Base
 CBlast4_finish_params_reply_Base –. More...
 
class  CBlast4_get_databases_ex_reply
 CBlast4_get_databases_ex_reply –. More...
 
class  CBlast4_get_databases_ex_reply_Base
 CBlast4_get_databases_ex_reply_Base –. More...
 
class  CBlast4_get_databases_reply
 CBlast4_get_databases_reply –. More...
 
class  CBlast4_get_databases_reply_Base
 CBlast4_get_databases_reply_Base –. More...
 
class  CBlast4_get_matrices_reply
 CBlast4_get_matrices_reply –. More...
 
class  CBlast4_get_matrices_reply_Base
 CBlast4_get_matrices_reply_Base –. More...
 
class  CBlast4_get_parameters_reply
 CBlast4_get_parameters_reply –. More...
 
class  CBlast4_get_parameters_reply_Base
 CBlast4_get_parameters_reply_Base –. More...
 
class  CBlast4_get_paramsets_reply
 CBlast4_get_paramsets_reply –. More...
 
class  CBlast4_get_paramsets_reply_Base
 Note: Paramsets and tasks represent the same concept: a human readable description that represents a set of parameters with specific values to accomplish a given task. More...
 
class  CBlast4_get_programs_reply
 CBlast4_get_programs_reply –. More...
 
class  CBlast4_get_programs_reply_Base
 CBlast4_get_programs_reply_Base –. More...
 
class  CBlast4_get_queries_reply
 CBlast4_get_queries_reply –. More...
 
class  CBlast4_get_queries_reply_Base
 CBlast4_get_queries_reply_Base –. More...
 
class  CBlast4_get_seq_parts_reply
 CBlast4_get_seq_parts_reply –. More...
 
class  CBlast4_get_seq_parts_reply_Base
 CBlast4_get_seq_parts_reply_Base –. More...
 
class  CBlast4_get_sequences_request
 CBlast4_get_sequences_request –. More...
 
class  CBlast4_get_sequences_request_Base
 Fetch sequence data from a BLAST database. More...
 
class  CBlast4_get_sequences_reply
 CBlast4_get_sequences_reply –. More...
 
class  CBlast4_get_sequences_reply_Base
 CBlast4_get_sequences_reply_Base –. More...
 
class  CBlast4_ka_block
 CBlast4_ka_block –. More...
 
class  CBlast4_ka_block_Base
 CBlast4_ka_block_Base –. More...
 
class  CBlast4_mask
 CBlast4_mask –. More...
 
class  CBlast4_mask_Base
 Masking locations for a query's frame. More...
 
class  CBlast4_matrix_id
 CBlast4_matrix_id –. More...
 
class  CBlast4_matrix_id_Base
 CBlast4_matrix_id_Base –. More...
 
class  CBlast4_parameter
 CBlast4_parameter –. More...
 
class  CBlast4_parameter_Base
 CBlast4_parameter_Base –. More...
 
class  CBlast4_parameter_info
 CBlast4_parameter_info –. More...
 
class  CBlast4_parameter_info_Base
 CBlast4_parameter_info_Base –. More...
 
class  CBlast4_parameters_Base
 CBlast4_parameters_Base –. More...
 
class  CBlast4_phi_alignments
 CBlast4_phi_alignments –. More...
 
class  CBlast4_phi_alignments_Base
 CBlast4_phi_alignments_Base –. More...
 
class  CBlast4_program_info
 CBlast4_program_info –. More...
 
class  CBlast4_program_info_Base
 CBlast4_program_info_Base –. More...
 
class  CBlast4_queries_Base
 If a PSSM is used (ie. More...
 
class  CBlast4_queue_search_reply
 CBlast4_queue_search_reply –. More...
 
class  CBlast4_queue_search_reply_Base
 CBlast4_queue_search_reply_Base –. More...
 
class  CBlast4_queue_search_request
 CBlast4_queue_search_request –. More...
 
class  CBlast4_queue_search_request_Base
 Options have been broken down into three groups as part of the BLAST API work. More...
 
class  CBlast4_range_Base
 Range on a sequence - zero offset. More...
 
class  CBlast4_reply
 CBlast4_reply –. More...
 
class  CBlast4_reply_Base
 Replies. More...
 
class  CBlast4_reply_body
 CBlast4_reply_body –. More...
 
class  CBlast4_reply_body_Base
 CBlast4_reply_body_Base –. More...
 
class  CBlast4_request
 CBlast4_request –. More...
 
class  CBlast4_request_Base
 Requests. More...
 
class  CBlast4_request_body
 CBlast4_request_body –. More...
 
class  CBlast4_request_body_Base
 CBlast4_request_body_Base –. More...
 
class  CBlast4_seq_part_data
 CBlast4_seq_part_data –. More...
 
class  CBlast4_seq_part_data_Base
 Bundles Seq-ids and sequence data to fulfill requests of type Blast4-get-seq-parts-request. More...
 
class  CBlast4_simple_alignment
 CBlast4_simple_alignment –. More...
 
class  CBlast4_simple_alignment_Base
 A single alignment. More...
 
class  CBlast4_simple_results
 CBlast4_simple_results –. More...
 
class  CBlast4_simple_results_Base
 Complete set of simple Blast results. More...
 
class  CBlast4_subject
 CBlast4_subject –. More...
 
class  CBlast4_subject_Base
 CBlast4_subject_Base –. More...
 
class  CBlast4_task_info
 CBlast4_task_info –. More...
 
class  CBlast4_task_info_Base
 Self documenting task structure. More...
 
class  CBlast4_value
 CBlast4_value –. More...
 
class  CBlast4_value_Base
 CBlast4_value_Base –. More...
 
class  CBlast4_finish_params_request
 CBlast4_finish_params_request –. More...
 
class  CBlast4_finish_params_request_Base
 END ADD EXT INFO. More...
 
class  CBlast4_get_databases_ex_request
 CBlast4_get_databases_ex_request –. More...
 
class  CBlast4_get_databases_ex_request_Base
 CBlast4_get_databases_ex_request_Base –. More...
 
class  CBlast4_get_protocol_info_reply
 CBlast4_get_protocol_info_reply –. More...
 
class  CBlast4_get_protocol_info_reply_Base
 CBlast4_get_protocol_info_reply_Base –. More...
 
class  CBlast4_get_protocol_info_request
 CBlast4_get_protocol_info_request –. More...
 
class  CBlast4_get_protocol_info_request_Base
 support for version and checking availability of methods More...
 
class  CBlast4_get_request_info_reply
 CBlast4_get_request_info_reply –. More...
 
class  CBlast4_get_request_info_reply_Base
 CBlast4_get_request_info_reply_Base –. More...
 
class  CBlast4_get_request_info_request
 CBlast4_get_request_info_request –. More...
 
class  CBlast4_get_request_info_request_Base
 Fetch information about the search request. More...
 
class  CBlast4_get_search_info_reply
 CBlast4_get_search_info_reply –. More...
 
class  CBlast4_get_search_info_reply_Base
 CBlast4_get_search_info_reply_Base –. More...
 
class  CBlast4_get_search_info_request
 CBlast4_get_search_info_request –. More...
 
class  CBlast4_get_search_info_request_Base
 variose search information More...
 
class  CBlast4_get_seq_parts_request
 CBlast4_get_seq_parts_request –. More...
 
class  CBlast4_get_seq_parts_request_Base
 Fetch parts of sequences from a BLAST database. More...
 
class  CBlast4Client
 CBlast4Client –. More...
 
class  CBlast4Client_Base
 CBlast4Client_Base –. More...
 

Typedefs

typedef CBlast4_get_search_results_reply_Base CBlast4_get_search_results_reply::Tparent
 
typedef CSerialObject CBlast4_get_search_results_reply_Base::Tparent
 
typedef CSeq_align_set CBlast4_get_search_results_reply_Base::TAlignments
 
typedef CBlast4_phi_alignments CBlast4_get_search_results_reply_Base::TPhi_alignments
 
typedef list< CRef< CBlast4_mask > > CBlast4_get_search_results_reply_Base::TMasks
 
typedef list< CRef< CBlast4_ka_block > > CBlast4_get_search_results_reply_Base::TKa_blocks
 
typedef list< stringCBlast4_get_search_results_reply_Base::TSearch_stats
 
typedef CPssmWithParameters CBlast4_get_search_results_reply_Base::TPssm
 
typedef CBlast4_simple_results CBlast4_get_search_results_reply_Base::TSimple_results
 
typedef Tparent::CMemberIndex< E_memberIndex, 8 > CBlast4_get_search_results_reply_Base::TmemberIndex
 
typedef CBlast4_get_search_results_request_Base CBlast4_get_search_results_request::Tparent
 
typedef CSerialObject CBlast4_get_search_results_request_Base::Tparent
 
typedef string CBlast4_get_search_results_request_Base::TRequest_id
 
typedef int CBlast4_get_search_results_request_Base::TResult_types
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_get_search_results_request_Base::TmemberIndex
 
typedef CBlast4_get_search_status_reply_Base CBlast4_get_search_status_reply::Tparent
 
typedef CSerialObject CBlast4_get_search_status_reply_Base::Tparent
 
typedef string CBlast4_get_search_status_reply_Base::TStatus
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_search_status_reply_Base::TmemberIndex
 
typedef CBlast4_get_search_status_request_Base CBlast4_get_search_status_request::Tparent
 
typedef CSerialObject CBlast4_get_search_status_request_Base::Tparent
 
typedef string CBlast4_get_search_status_request_Base::TRequest_id
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_search_status_request_Base::TmemberIndex
 
typedef CBlast4_get_search_strategy_reply_Base CBlast4_get_search_strategy_reply::Tparent
 
typedef CBlast4_request CBlast4_get_search_strategy_reply_Base::Tparent
 
typedef CBlast4_get_search_strategy_request_Base CBlast4_get_search_strategy_request::Tparent
 
typedef CSerialObject CBlast4_get_search_strategy_request_Base::Tparent
 
typedef string CBlast4_get_search_strategy_request_Base::TRequest_id
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_search_strategy_request_Base::TmemberIndex
 
typedef CBlast4_get_windowmasked_taxids_reply_Base CBlast4_get_windowmasked_taxids_reply::Tparent
 
typedef CSerialObject CBlast4_get_windowmasked_taxids_reply_Base::Tparent
 
typedef set< intCBlast4_get_windowmasked_taxids_reply_Base::Tdata
 
typedef CBlast4_alignments_for_query_Base CBlast4_alignments_for_query::Tparent
 
typedef CSerialObject CBlast4_alignments_for_query_Base::Tparent
 
typedef string CBlast4_alignments_for_query_Base::TQuery_id
 
typedef list< CRef< CBlast4_simple_alignment > > CBlast4_alignments_for_query_Base::TAlignments
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_alignments_for_query_Base::TmemberIndex
 
typedef CBlast4_archive_Base CBlast4_archive::Tparent
 
typedef CSerialObject CBlast4_archive_Base::Tparent
 
typedef CBlast4_request CBlast4_archive_Base::TRequest
 
typedef CBlast4_get_search_results_reply CBlast4_archive_Base::TResults
 
typedef list< CRef< CBlast4_error > > CBlast4_archive_Base::TMessages
 
typedef Tparent::CMemberIndex< E_memberIndex, 4 > CBlast4_archive_Base::TmemberIndex
 
typedef CBlast4_cutoff_Base CBlast4_cutoff::Tparent
 
typedef CSerialObject CBlast4_cutoff_Base::Tparent
 
typedef double CBlast4_cutoff_Base::TE_value
 
typedef int CBlast4_cutoff_Base::TRaw_score
 
typedef CSerialObject CBlast4_database_Base::Tparent
 
typedef string CBlast4_database_Base::TName
 
typedef EBlast4_residue_type CBlast4_database_Base::TType
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_database_Base::TmemberIndex
 
typedef CBlast4_database_info_Base CBlast4_database_info::Tparent
 
typedef CSerialObject CBlast4_database_info_Base::Tparent
 
typedef CBlast4_database CBlast4_database_info_Base::TDatabase
 
typedef string CBlast4_database_info_Base::TDescription
 
typedef string CBlast4_database_info_Base::TLast_updated
 
typedef Int8 CBlast4_database_info_Base::TTotal_length
 
typedef Int8 CBlast4_database_info_Base::TNum_sequences
 
typedef int CBlast4_database_info_Base::TSeqtech
 
typedef int CBlast4_database_info_Base::TTaxid
 
typedef CBlast4_parameters CBlast4_database_info_Base::TExtended
 
typedef Tparent::CMemberIndex< E_memberIndex, 9 > CBlast4_database_info_Base::TmemberIndex
 
typedef CBlast4_error_Base CBlast4_error::Tparent
 
typedef CSerialObject CBlast4_error_Base::Tparent
 
typedef int CBlast4_error_Base::TCode
 
typedef string CBlast4_error_Base::TMessage
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_error_Base::TmemberIndex
 
typedef CBlast4_finish_params_reply_Base CBlast4_finish_params_reply::Tparent
 
typedef CBlast4_parameters CBlast4_finish_params_reply_Base::Tparent
 
typedef CBlast4_get_databases_ex_reply_Base CBlast4_get_databases_ex_reply::Tparent
 
typedef CSerialObject CBlast4_get_databases_ex_reply_Base::Tparent
 
typedef list< CRef< CBlast4_database_info > > CBlast4_get_databases_ex_reply_Base::Tdata
 
typedef CBlast4_get_databases_reply_Base CBlast4_get_databases_reply::Tparent
 
typedef CSerialObject CBlast4_get_databases_reply_Base::Tparent
 
typedef list< CRef< CBlast4_database_info > > CBlast4_get_databases_reply_Base::Tdata
 
typedef CBlast4_get_matrices_reply_Base CBlast4_get_matrices_reply::Tparent
 
typedef CSerialObject CBlast4_get_matrices_reply_Base::Tparent
 
typedef list< CRef< CBlast4_matrix_id > > CBlast4_get_matrices_reply_Base::Tdata
 
typedef CBlast4_get_parameters_reply_Base CBlast4_get_parameters_reply::Tparent
 
typedef CSerialObject CBlast4_get_parameters_reply_Base::Tparent
 
typedef list< CRef< CBlast4_parameter_info > > CBlast4_get_parameters_reply_Base::Tdata
 
typedef CBlast4_get_paramsets_reply_Base CBlast4_get_paramsets_reply::Tparent
 
typedef CSerialObject CBlast4_get_paramsets_reply_Base::Tparent
 
typedef list< CRef< CBlast4_task_info > > CBlast4_get_paramsets_reply_Base::Tdata
 
typedef CBlast4_get_programs_reply_Base CBlast4_get_programs_reply::Tparent
 
typedef CSerialObject CBlast4_get_programs_reply_Base::Tparent
 
typedef list< CRef< CBlast4_program_info > > CBlast4_get_programs_reply_Base::Tdata
 
typedef CBlast4_get_queries_reply_Base CBlast4_get_queries_reply::Tparent
 
typedef CSerialObject CBlast4_get_queries_reply_Base::Tparent
 
typedef CBlast4_queries CBlast4_get_queries_reply_Base::TQueries
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_queries_reply_Base::TmemberIndex
 
typedef CBlast4_get_seq_parts_reply_Base CBlast4_get_seq_parts_reply::Tparent
 
typedef CSerialObject CBlast4_get_seq_parts_reply_Base::Tparent
 
typedef list< CRef< CBlast4_seq_part_data > > CBlast4_get_seq_parts_reply_Base::Tdata
 
typedef CBlast4_get_sequences_request_Base CBlast4_get_sequences_request::Tparent
 
typedef CSerialObject CBlast4_get_sequences_request_Base::Tparent
 
typedef CBlast4_database CBlast4_get_sequences_request_Base::TDatabase
 
typedef list< CRef< CSeq_id > > CBlast4_get_sequences_request_Base::TSeq_ids
 
typedef bool CBlast4_get_sequences_request_Base::TSkip_seq_data
 
typedef bool CBlast4_get_sequences_request_Base::TTarget_only
 
typedef Tparent::CMemberIndex< E_memberIndex, 5 > CBlast4_get_sequences_request_Base::TmemberIndex
 
typedef CBlast4_get_sequences_reply_Base CBlast4_get_sequences_reply::Tparent
 
typedef CSerialObject CBlast4_get_sequences_reply_Base::Tparent
 
typedef list< CRef< CBioseq > > CBlast4_get_sequences_reply_Base::Tdata
 
typedef CBlast4_ka_block_Base CBlast4_ka_block::Tparent
 
typedef CSerialObject CBlast4_ka_block_Base::Tparent
 
typedef double CBlast4_ka_block_Base::TLambda
 
typedef double CBlast4_ka_block_Base::TK
 
typedef double CBlast4_ka_block_Base::TH
 
typedef bool CBlast4_ka_block_Base::TGapped
 
typedef Tparent::CMemberIndex< E_memberIndex, 5 > CBlast4_ka_block_Base::TmemberIndex
 
typedef CBlast4_mask_Base CBlast4_mask::Tparent
 
typedef CSerialObject CBlast4_mask_Base::Tparent
 
typedef list< CRef< CSeq_loc > > CBlast4_mask_Base::TLocations
 
typedef EBlast4_frame_type CBlast4_mask_Base::TFrame
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_mask_Base::TmemberIndex
 
typedef CBlast4_matrix_id_Base CBlast4_matrix_id::Tparent
 
typedef CSerialObject CBlast4_matrix_id_Base::Tparent
 
typedef EBlast4_residue_type CBlast4_matrix_id_Base::TResidue_type
 
typedef string CBlast4_matrix_id_Base::TName
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_matrix_id_Base::TmemberIndex
 
typedef CBlast4_parameter_Base CBlast4_parameter::Tparent
 
typedef CSerialObject CBlast4_parameter_Base::Tparent
 
typedef string CBlast4_parameter_Base::TName
 
typedef CBlast4_value CBlast4_parameter_Base::TValue
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_parameter_Base::TmemberIndex
 
typedef CBlast4_parameter_info_Base CBlast4_parameter_info::Tparent
 
typedef CSerialObject CBlast4_parameter_info_Base::Tparent
 
typedef string CBlast4_parameter_info_Base::TName
 
typedef string CBlast4_parameter_info_Base::TType
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_parameter_info_Base::TmemberIndex
 
typedef CSerialObject CBlast4_parameters_Base::Tparent
 
typedef list< CRef< CBlast4_parameter > > CBlast4_parameters_Base::Tdata
 
typedef CBlast4_phi_alignments_Base CBlast4_phi_alignments::Tparent
 
typedef CSerialObject CBlast4_phi_alignments_Base::Tparent
 
typedef int CBlast4_phi_alignments_Base::TNum_alignments
 
typedef list< CRef< CSeq_loc > > CBlast4_phi_alignments_Base::TSeq_locs
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_phi_alignments_Base::TmemberIndex
 
typedef CBlast4_program_info_Base CBlast4_program_info::Tparent
 
typedef CSerialObject CBlast4_program_info_Base::Tparent
 
typedef string CBlast4_program_info_Base::TProgram
 
typedef list< stringCBlast4_program_info_Base::TServices
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_program_info_Base::TmemberIndex
 
typedef CSerialObject CBlast4_queries_Base::Tparent
 
typedef CPssmWithParameters CBlast4_queries_Base::TPssm
 
typedef list< CRef< CSeq_loc > > CBlast4_queries_Base::TSeq_loc_list
 
typedef CBioseq_set CBlast4_queries_Base::TBioseq_set
 
typedef CBlast4_queue_search_reply_Base CBlast4_queue_search_reply::Tparent
 
typedef CSerialObject CBlast4_queue_search_reply_Base::Tparent
 
typedef string CBlast4_queue_search_reply_Base::TRequest_id
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_queue_search_reply_Base::TmemberIndex
 
typedef CBlast4_queue_search_request_Base CBlast4_queue_search_request::Tparent
 
typedef CSerialObject CBlast4_queue_search_request_Base::Tparent
 
typedef string CBlast4_queue_search_request_Base::TProgram
 
typedef string CBlast4_queue_search_request_Base::TService
 
typedef CBlast4_queries CBlast4_queue_search_request_Base::TQueries
 
typedef CBlast4_subject CBlast4_queue_search_request_Base::TSubject
 
typedef string CBlast4_queue_search_request_Base::TParamset
 
typedef CBlast4_parameters CBlast4_queue_search_request_Base::TAlgorithm_options
 
typedef CBlast4_parameters CBlast4_queue_search_request_Base::TProgram_options
 
typedef CBlast4_parameters CBlast4_queue_search_request_Base::TFormat_options
 
typedef Tparent::CMemberIndex< E_memberIndex, 9 > CBlast4_queue_search_request_Base::TmemberIndex
 
typedef CSerialObject CBlast4_range_Base::Tparent
 
typedef int CBlast4_range_Base::TStart
 
typedef int CBlast4_range_Base::TEnd
 
typedef int CBlast4_range_Base::TStrand
 
typedef Tparent::CMemberIndex< E_memberIndex, 4 > CBlast4_range_Base::TmemberIndex
 
typedef CBlast4_reply_Base CBlast4_reply::Tparent
 
typedef CSerialObject CBlast4_reply_Base::Tparent
 
typedef list< CRef< CBlast4_error > > CBlast4_reply_Base::TErrors
 
typedef CBlast4_reply_body CBlast4_reply_Base::TBody
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_reply_Base::TmemberIndex
 
typedef CBlast4_reply_body_Base CBlast4_reply_body::Tparent
 
typedef CSerialObject CBlast4_reply_body_Base::Tparent
 
typedef CBlast4_finish_params_reply CBlast4_reply_body_Base::TFinish_params
 
typedef CBlast4_get_databases_reply CBlast4_reply_body_Base::TGet_databases
 
typedef CBlast4_get_matrices_reply CBlast4_reply_body_Base::TGet_matrices
 
typedef CBlast4_get_parameters_reply CBlast4_reply_body_Base::TGet_parameters
 
typedef CBlast4_get_paramsets_reply CBlast4_reply_body_Base::TGet_paramsets
 
typedef CBlast4_get_programs_reply CBlast4_reply_body_Base::TGet_programs
 
typedef CBlast4_get_search_results_reply CBlast4_reply_body_Base::TGet_search_results
 
typedef CBlast4_get_sequences_reply CBlast4_reply_body_Base::TGet_sequences
 
typedef CBlast4_queue_search_reply CBlast4_reply_body_Base::TQueue_search
 
typedef CBlast4_get_queries_reply CBlast4_reply_body_Base::TGet_queries
 
typedef CBlast4_get_request_info_reply CBlast4_reply_body_Base::TGet_request_info
 
typedef CBlast4_get_seq_parts_reply CBlast4_reply_body_Base::TGet_sequence_parts
 
typedef CBlast4_get_windowmasked_taxids_reply CBlast4_reply_body_Base::TGet_windowmasked_taxids
 
typedef CBlast4_get_protocol_info_reply CBlast4_reply_body_Base::TGet_protocol_info
 
typedef CBlast4_get_search_info_reply CBlast4_reply_body_Base::TGet_search_info
 
typedef CBlast4_get_databases_ex_reply CBlast4_reply_body_Base::TGet_databases_ex
 
typedef CBlast4_request_Base CBlast4_request::Tparent
 
typedef CSerialObject CBlast4_request_Base::Tparent
 
typedef string CBlast4_request_Base::TIdent
 
typedef CBlast4_request_body CBlast4_request_Base::TBody
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_request_Base::TmemberIndex
 
typedef CBlast4_request_body_Base CBlast4_request_body::Tparent
 
typedef CSerialObject CBlast4_request_body_Base::Tparent
 
typedef CBlast4_finish_params_request CBlast4_request_body_Base::TFinish_params
 
typedef CBlast4_get_search_results_request CBlast4_request_body_Base::TGet_search_results
 
typedef CBlast4_get_sequences_request CBlast4_request_body_Base::TGet_sequences
 
typedef CBlast4_queue_search_request CBlast4_request_body_Base::TQueue_search
 
typedef CBlast4_get_request_info_request CBlast4_request_body_Base::TGet_request_info
 
typedef CBlast4_get_seq_parts_request CBlast4_request_body_Base::TGet_sequence_parts
 
typedef CBlast4_get_protocol_info_request CBlast4_request_body_Base::TGet_protocol_info
 
typedef CBlast4_get_search_info_request CBlast4_request_body_Base::TGet_search_info
 
typedef CBlast4_get_databases_ex_request CBlast4_request_body_Base::TGet_databases_ex
 
typedef CBlast4_seq_part_data_Base CBlast4_seq_part_data::Tparent
 
typedef CSerialObject CBlast4_seq_part_data_Base::Tparent
 
typedef CSeq_id CBlast4_seq_part_data_Base::TId
 
typedef CSeq_data CBlast4_seq_part_data_Base::TData
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_seq_part_data_Base::TmemberIndex
 
typedef CBlast4_simple_alignment_Base CBlast4_simple_alignment::Tparent
 
typedef CSerialObject CBlast4_simple_alignment_Base::Tparent
 
typedef string CBlast4_simple_alignment_Base::TSubject_id
 
typedef double CBlast4_simple_alignment_Base::TE_value
 
typedef double CBlast4_simple_alignment_Base::TBit_score
 
typedef int CBlast4_simple_alignment_Base::TNum_identities
 
typedef int CBlast4_simple_alignment_Base::TNum_indels
 
typedef CBlast4_range CBlast4_simple_alignment_Base::TFull_query_range
 
typedef CBlast4_range CBlast4_simple_alignment_Base::TFull_subject_range
 
typedef Tparent::CMemberIndex< E_memberIndex, 8 > CBlast4_simple_alignment_Base::TmemberIndex
 
typedef CBlast4_simple_results_Base CBlast4_simple_results::Tparent
 
typedef CSerialObject CBlast4_simple_results_Base::Tparent
 
typedef CBlast4_alignments_for_query CBlast4_simple_results_Base::C_E
 
typedef list< CRef< CBlast4_alignments_for_query > > CBlast4_simple_results_Base::TAll_alignments
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_simple_results_Base::TmemberIndex
 
typedef CBlast4_subject_Base CBlast4_subject::Tparent
 
typedef CSerialObject CBlast4_subject_Base::Tparent
 
typedef string CBlast4_subject_Base::TDatabase
 
typedef list< CRef< CBioseq > > CBlast4_subject_Base::TSequences
 
typedef list< CRef< CSeq_loc > > CBlast4_subject_Base::TSeq_loc_list
 
typedef CBlast4_task_info_Base CBlast4_task_info::Tparent
 
typedef CSerialObject CBlast4_task_info_Base::Tparent
 
typedef string CBlast4_task_info_Base::TName
 
typedef string CBlast4_task_info_Base::TDocumentation
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_task_info_Base::TmemberIndex
 
typedef CBlast4_value_Base CBlast4_value::Tparent
 
typedef CSerialObject CBlast4_value_Base::Tparent
 
typedef Int8 CBlast4_value_Base::TBig_integer
 
typedef CBioseq CBlast4_value_Base::TBioseq
 
typedef bool CBlast4_value_Base::TBoolean
 
typedef CBlast4_cutoff CBlast4_value_Base::TCutoff
 
typedef int CBlast4_value_Base::TInteger
 
typedef CPssmWithParameters CBlast4_value_Base::TMatrix
 
typedef double CBlast4_value_Base::TReal
 
typedef CSeq_align CBlast4_value_Base::TSeq_align
 
typedef CSeq_id CBlast4_value_Base::TSeq_id
 
typedef CSeq_loc CBlast4_value_Base::TSeq_loc
 
typedef EBlast4_strand_type CBlast4_value_Base::TStrand_type
 
typedef string CBlast4_value_Base::TString
 
typedef list< Int8CBlast4_value_Base::TBig_integer_list
 
typedef list< CRef< CBioseq > > CBlast4_value_Base::TBioseq_list
 
typedef list< boolCBlast4_value_Base::TBoolean_list
 
typedef list< CRef< CBlast4_cutoff > > CBlast4_value_Base::TCutoff_list
 
typedef list< intCBlast4_value_Base::TInteger_list
 
typedef list< CRef< CPssmWithParameters > > CBlast4_value_Base::TMatrix_list
 
typedef list< double > CBlast4_value_Base::TReal_list
 
typedef list< CRef< CSeq_align > > CBlast4_value_Base::TSeq_align_list
 
typedef list< CRef< CSeq_id > > CBlast4_value_Base::TSeq_id_list
 
typedef list< CRef< CSeq_loc > > CBlast4_value_Base::TSeq_loc_list
 
typedef list< EBlast4_strand_typeCBlast4_value_Base::TStrand_type_list
 
typedef list< stringCBlast4_value_Base::TString_list
 
typedef CBioseq_set CBlast4_value_Base::TBioseq_set
 
typedef CSeq_align_set CBlast4_value_Base::TSeq_align_set
 
typedef CBlast4_mask CBlast4_value_Base::TQuery_mask
 
typedef CBlast4_finish_params_request_Base CBlast4_finish_params_request::Tparent
 
typedef CSerialObject CBlast4_finish_params_request_Base::Tparent
 
typedef string CBlast4_finish_params_request_Base::TProgram
 
typedef string CBlast4_finish_params_request_Base::TService
 
typedef string CBlast4_finish_params_request_Base::TParamset
 
typedef CBlast4_parameters CBlast4_finish_params_request_Base::TParams
 
typedef Tparent::CMemberIndex< E_memberIndex, 5 > CBlast4_finish_params_request_Base::TmemberIndex
 
typedef CBlast4_get_databases_ex_request_Base CBlast4_get_databases_ex_request::Tparent
 
typedef CSerialObject CBlast4_get_databases_ex_request_Base::Tparent
 
typedef CBlast4_parameters CBlast4_get_databases_ex_request_Base::TParams
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_databases_ex_request_Base::TmemberIndex
 
typedef CBlast4_get_protocol_info_reply_Base CBlast4_get_protocol_info_reply::Tparent
 
typedef CBlast4_parameters CBlast4_get_protocol_info_reply_Base::Tparent
 
typedef CBlast4_get_protocol_info_request_Base CBlast4_get_protocol_info_request::Tparent
 
typedef CBlast4_parameters CBlast4_get_protocol_info_request_Base::Tparent
 
typedef CBlast4_get_request_info_reply_Base CBlast4_get_request_info_reply::Tparent
 
typedef CSerialObject CBlast4_get_request_info_reply_Base::Tparent
 
typedef CBlast4_database CBlast4_get_request_info_reply_Base::TDatabase
 
typedef string CBlast4_get_request_info_reply_Base::TProgram
 
typedef string CBlast4_get_request_info_reply_Base::TService
 
typedef string CBlast4_get_request_info_reply_Base::TCreated_by
 
typedef CBlast4_queries CBlast4_get_request_info_reply_Base::TQueries
 
typedef CBlast4_parameters CBlast4_get_request_info_reply_Base::TAlgorithm_options
 
typedef CBlast4_parameters CBlast4_get_request_info_reply_Base::TProgram_options
 
typedef CBlast4_parameters CBlast4_get_request_info_reply_Base::TFormat_options
 
typedef CBlast4_subject CBlast4_get_request_info_reply_Base::TSubjects
 
typedef Tparent::CMemberIndex< E_memberIndex, 10 > CBlast4_get_request_info_reply_Base::TmemberIndex
 
typedef CBlast4_get_request_info_request_Base CBlast4_get_request_info_request::Tparent
 
typedef CSerialObject CBlast4_get_request_info_request_Base::Tparent
 
typedef string CBlast4_get_request_info_request_Base::TRequest_id
 
typedef Tparent::CMemberIndex< E_memberIndex, 2 > CBlast4_get_request_info_request_Base::TmemberIndex
 
typedef CBlast4_get_search_info_reply_Base CBlast4_get_search_info_reply::Tparent
 
typedef CSerialObject CBlast4_get_search_info_reply_Base::Tparent
 
typedef string CBlast4_get_search_info_reply_Base::TRequest_id
 
typedef CBlast4_parameters CBlast4_get_search_info_reply_Base::TInfo
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_get_search_info_reply_Base::TmemberIndex
 
typedef CBlast4_get_search_info_request_Base CBlast4_get_search_info_request::Tparent
 
typedef CSerialObject CBlast4_get_search_info_request_Base::Tparent
 
typedef string CBlast4_get_search_info_request_Base::TRequest_id
 
typedef CBlast4_parameters CBlast4_get_search_info_request_Base::TInfo
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_get_search_info_request_Base::TmemberIndex
 
typedef CBlast4_get_seq_parts_request_Base CBlast4_get_seq_parts_request::Tparent
 
typedef CSerialObject CBlast4_get_seq_parts_request_Base::Tparent
 
typedef CBlast4_database CBlast4_get_seq_parts_request_Base::TDatabase
 
typedef list< CRef< CSeq_interval > > CBlast4_get_seq_parts_request_Base::TSeq_locations
 
typedef Tparent::CMemberIndex< E_memberIndex, 3 > CBlast4_get_seq_parts_request_Base::TmemberIndex
 
typedef CBlast4Client_Base CBlast4Client::Tparent
 
typedef CRPCClient< CBlast4_request, CBlast4_replyCBlast4Client_Base::Tparent
 
typedef CBlast4_request CBlast4Client_Base::TRequest
 
typedef CBlast4_reply CBlast4Client_Base::TReply
 
typedef CBlast4_request_body CBlast4Client_Base::TRequestChoice
 
typedef CBlast4_reply_body CBlast4Client_Base::TReplyChoice
 

Enumerations

enum class  CBlast4_get_search_results_reply_Base::E_memberIndex {
  CBlast4_get_search_results_reply_Base::e__allMandatory = 0 , CBlast4_get_search_results_reply_Base::e_alignments , CBlast4_get_search_results_reply_Base::e_phi_alignments , CBlast4_get_search_results_reply_Base::e_masks ,
  CBlast4_get_search_results_reply_Base::e_ka_blocks , CBlast4_get_search_results_reply_Base::e_search_stats , CBlast4_get_search_results_reply_Base::e_pssm , CBlast4_get_search_results_reply_Base::e_simple_results
}
 
enum class  CBlast4_get_search_results_request_Base::E_memberIndex { CBlast4_get_search_results_request_Base::e__allMandatory = 0 , CBlast4_get_search_results_request_Base::e_request_id , CBlast4_get_search_results_request_Base::e_result_types }
 
enum class  CBlast4_get_search_status_reply_Base::E_memberIndex { CBlast4_get_search_status_reply_Base::e__allMandatory = 0 , CBlast4_get_search_status_reply_Base::e_status }
 
enum class  CBlast4_get_search_status_request_Base::E_memberIndex { CBlast4_get_search_status_request_Base::e__allMandatory = 0 , CBlast4_get_search_status_request_Base::e_request_id }
 
enum class  CBlast4_get_search_strategy_request_Base::E_memberIndex { CBlast4_get_search_strategy_request_Base::e__allMandatory = 0 , CBlast4_get_search_strategy_request_Base::e_request_id }
 
enum class  CBlast4_alignments_for_query_Base::E_memberIndex { CBlast4_alignments_for_query_Base::e__allMandatory = 0 , CBlast4_alignments_for_query_Base::e_query_id , CBlast4_alignments_for_query_Base::e_alignments }
 
enum class  CBlast4_archive_Base::E_memberIndex { CBlast4_archive_Base::e__allMandatory = 0 , CBlast4_archive_Base::e_request , CBlast4_archive_Base::e_results , CBlast4_archive_Base::e_messages }
 
enum  CBlast4_cutoff_Base::E_Choice { CBlast4_cutoff_Base::e_not_set = 0 , CBlast4_cutoff_Base::e_E_value , CBlast4_cutoff_Base::e_Raw_score }
 Choice variants. More...
 
enum  CBlast4_cutoff_Base::E_ChoiceStopper { CBlast4_cutoff_Base::e_MaxChoice = 3 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum class  CBlast4_database_Base::E_memberIndex { CBlast4_database_Base::e__allMandatory = 0 , CBlast4_database_Base::e_name , CBlast4_database_Base::e_type }
 
enum class  CBlast4_database_info_Base::E_memberIndex {
  CBlast4_database_info_Base::e__allMandatory = 0 , CBlast4_database_info_Base::e_database , CBlast4_database_info_Base::e_description , CBlast4_database_info_Base::e_last_updated ,
  CBlast4_database_info_Base::e_total_length , CBlast4_database_info_Base::e_num_sequences , CBlast4_database_info_Base::e_seqtech , CBlast4_database_info_Base::e_taxid ,
  CBlast4_database_info_Base::e_extended
}
 
enum class  CBlast4_error_Base::E_memberIndex { CBlast4_error_Base::e__allMandatory = 0 , CBlast4_error_Base::e_code , CBlast4_error_Base::e_message }
 
enum  EBlast4_error_code {
  eBlast4_error_code_conversion_warning = 1024 , eBlast4_error_code_internal_error = 2048 , eBlast4_error_code_not_implemented = 2049 , eBlast4_error_code_not_allowed = 2050 ,
  eBlast4_error_code_bad_request = 2051 , eBlast4_error_code_bad_request_id = 2052 , eBlast4_error_code_search_pending = 2053
}
 Defines values for use in Blast4-errorcode. More...
 
enum  EBlast4_error_flags { eBlast4_error_flags_warning = 1024 , eBlast4_error_flags_error = 2048 }
 This enumeration defines values that are intended to be used with the Blast4-errorcode in a logical AND operation to easily determine whether a given Blast4-error object contains either a warning or an error. More...
 
enum  EBlast4_frame_type {
  eBlast4_frame_type_notset = 0 , eBlast4_frame_type_plus1 = 1 , eBlast4_frame_type_plus2 = 2 , eBlast4_frame_type_plus3 = 3 ,
  eBlast4_frame_type_minus1 = 4 , eBlast4_frame_type_minus2 = 5 , eBlast4_frame_type_minus3 = 6
}
 Access to EBlast4_frame_type's attributes (values, names) as defined in spec. More...
 
enum class  CBlast4_get_queries_reply_Base::E_memberIndex { CBlast4_get_queries_reply_Base::e__allMandatory = 0 , CBlast4_get_queries_reply_Base::e_queries }
 
enum class  CBlast4_get_sequences_request_Base::E_memberIndex {
  CBlast4_get_sequences_request_Base::e__allMandatory = 0 , CBlast4_get_sequences_request_Base::e_database , CBlast4_get_sequences_request_Base::e_seq_ids , CBlast4_get_sequences_request_Base::e_skip_seq_data ,
  CBlast4_get_sequences_request_Base::e_target_only
}
 
enum class  CBlast4_ka_block_Base::E_memberIndex {
  CBlast4_ka_block_Base::e__allMandatory = 0 , CBlast4_ka_block_Base::e_lambda , CBlast4_ka_block_Base::e_k , CBlast4_ka_block_Base::e_h ,
  CBlast4_ka_block_Base::e_gapped
}
 
enum class  CBlast4_mask_Base::E_memberIndex { CBlast4_mask_Base::e__allMandatory = 0 , CBlast4_mask_Base::e_locations , CBlast4_mask_Base::e_frame }
 
enum class  CBlast4_matrix_id_Base::E_memberIndex { CBlast4_matrix_id_Base::e__allMandatory = 0 , CBlast4_matrix_id_Base::e_residue_type , CBlast4_matrix_id_Base::e_name }
 
enum class  CBlast4_parameter_Base::E_memberIndex { CBlast4_parameter_Base::e__allMandatory = 0 , CBlast4_parameter_Base::e_name , CBlast4_parameter_Base::e_value }
 
enum class  CBlast4_parameter_info_Base::E_memberIndex { CBlast4_parameter_info_Base::e__allMandatory = 0 , CBlast4_parameter_info_Base::e_name , CBlast4_parameter_info_Base::e_type }
 
enum class  CBlast4_phi_alignments_Base::E_memberIndex { CBlast4_phi_alignments_Base::e__allMandatory = 0 , CBlast4_phi_alignments_Base::e_num_alignments , CBlast4_phi_alignments_Base::e_seq_locs }
 
enum class  CBlast4_program_info_Base::E_memberIndex { CBlast4_program_info_Base::e__allMandatory = 0 , CBlast4_program_info_Base::e_program , CBlast4_program_info_Base::e_services }
 
enum  CBlast4_queries_Base::E_Choice { CBlast4_queries_Base::e_not_set = 0 , CBlast4_queries_Base::e_Pssm , CBlast4_queries_Base::e_Seq_loc_list , CBlast4_queries_Base::e_Bioseq_set }
 Choice variants. More...
 
enum  CBlast4_queries_Base::E_ChoiceStopper { CBlast4_queries_Base::e_MaxChoice = 4 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum class  CBlast4_queue_search_reply_Base::E_memberIndex { CBlast4_queue_search_reply_Base::e__allMandatory = 0 , CBlast4_queue_search_reply_Base::e_request_id }
 
enum class  CBlast4_queue_search_request_Base::E_memberIndex {
  CBlast4_queue_search_request_Base::e__allMandatory = 0 , CBlast4_queue_search_request_Base::e_program , CBlast4_queue_search_request_Base::e_service , CBlast4_queue_search_request_Base::e_queries ,
  CBlast4_queue_search_request_Base::e_subject , CBlast4_queue_search_request_Base::e_paramset , CBlast4_queue_search_request_Base::e_algorithm_options , CBlast4_queue_search_request_Base::e_program_options ,
  CBlast4_queue_search_request_Base::e_format_options
}
 
enum class  CBlast4_range_Base::E_memberIndex { CBlast4_range_Base::e__allMandatory = 0 , CBlast4_range_Base::e_start , CBlast4_range_Base::e_end , CBlast4_range_Base::e_strand }
 
enum class  CBlast4_reply_Base::E_memberIndex { CBlast4_reply_Base::e__allMandatory = 0 , CBlast4_reply_Base::e_errors , CBlast4_reply_Base::e_body }
 
enum  CBlast4_reply_body_Base::E_Choice {
  CBlast4_reply_body_Base::e_not_set = 0 , CBlast4_reply_body_Base::e_Finish_params , CBlast4_reply_body_Base::e_Get_databases , CBlast4_reply_body_Base::e_Get_matrices ,
  CBlast4_reply_body_Base::e_Get_parameters , CBlast4_reply_body_Base::e_Get_paramsets , CBlast4_reply_body_Base::e_Get_programs , CBlast4_reply_body_Base::e_Get_search_results ,
  CBlast4_reply_body_Base::e_Get_sequences , CBlast4_reply_body_Base::e_Queue_search , CBlast4_reply_body_Base::e_Get_queries , CBlast4_reply_body_Base::e_Get_request_info ,
  CBlast4_reply_body_Base::e_Get_sequence_parts , CBlast4_reply_body_Base::e_Get_windowmasked_taxids , CBlast4_reply_body_Base::e_Get_protocol_info , CBlast4_reply_body_Base::e_Get_search_info ,
  CBlast4_reply_body_Base::e_Get_databases_ex
}
 Choice variants. More...
 
enum  CBlast4_reply_body_Base::E_ChoiceStopper { CBlast4_reply_body_Base::e_MaxChoice = 17 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum class  CBlast4_request_Base::E_memberIndex { CBlast4_request_Base::e__allMandatory = 0 , CBlast4_request_Base::e_ident , CBlast4_request_Base::e_body }
 
enum  CBlast4_request_body_Base::E_Choice {
  CBlast4_request_body_Base::e_not_set = 0 , CBlast4_request_body_Base::e_Finish_params , CBlast4_request_body_Base::e_Get_databases , CBlast4_request_body_Base::e_Get_matrices ,
  CBlast4_request_body_Base::e_Get_parameters , CBlast4_request_body_Base::e_Get_paramsets , CBlast4_request_body_Base::e_Get_programs , CBlast4_request_body_Base::e_Get_search_results ,
  CBlast4_request_body_Base::e_Get_sequences , CBlast4_request_body_Base::e_Queue_search , CBlast4_request_body_Base::e_Get_request_info , CBlast4_request_body_Base::e_Get_sequence_parts ,
  CBlast4_request_body_Base::e_Get_windowmasked_taxids , CBlast4_request_body_Base::e_Get_protocol_info , CBlast4_request_body_Base::e_Get_search_info , CBlast4_request_body_Base::e_Get_databases_ex
}
 Choice variants. More...
 
enum  CBlast4_request_body_Base::E_ChoiceStopper { CBlast4_request_body_Base::e_MaxChoice = 16 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum  EBlast4_residue_type { eBlast4_residue_type_unknown = 0 , eBlast4_residue_type_protein = 1 , eBlast4_residue_type_nucleotide = 2 }
 Access to EBlast4_residue_type's attributes (values, names) as defined in spec. More...
 
enum  EBlast4_result_types {
  eBlast4_result_types_default = 63 , eBlast4_result_types_alignments = 1 , eBlast4_result_types_phi_alignments = 2 , eBlast4_result_types_masks = 4 ,
  eBlast4_result_types_ka_blocks = 8 , eBlast4_result_types_search_stats = 16 , eBlast4_result_types_pssm = 32 , eBlast4_result_types_simple_results = 64
}
 This type allows the specification of what result types are desired. More...
 
enum class  CBlast4_seq_part_data_Base::E_memberIndex { CBlast4_seq_part_data_Base::e__allMandatory = 0 , CBlast4_seq_part_data_Base::e_id , CBlast4_seq_part_data_Base::e_data }
 
enum  EBlast4_seqtech {
  eBlast4_seqtech_unknown = 0 , eBlast4_seqtech_standard = 1 , eBlast4_seqtech_est = 2 , eBlast4_seqtech_sts = 3 ,
  eBlast4_seqtech_survey = 4 , eBlast4_seqtech_genemap = 5 , eBlast4_seqtech_physmap = 6 , eBlast4_seqtech_derived = 7 ,
  eBlast4_seqtech_concept_trans = 8 , eBlast4_seqtech_seq_pept = 9 , eBlast4_seqtech_both = 10 , eBlast4_seqtech_seq_pept_overlap = 11 ,
  eBlast4_seqtech_seq_pept_homol = 12 , eBlast4_seqtech_concept_trans_a = 13 , eBlast4_seqtech_htgs_1 = 14 , eBlast4_seqtech_htgs_2 = 15 ,
  eBlast4_seqtech_htgs_3 = 16 , eBlast4_seqtech_fli_cdna = 17 , eBlast4_seqtech_htgs_0 = 18 , eBlast4_seqtech_htc = 19 ,
  eBlast4_seqtech_wgs = 20 , eBlast4_seqtech_other = 255
}
 Borrowed from seq.asn. More...
 
enum class  CBlast4_simple_alignment_Base::E_memberIndex {
  CBlast4_simple_alignment_Base::e__allMandatory = 0 , CBlast4_simple_alignment_Base::e_subject_id , CBlast4_simple_alignment_Base::e_e_value , CBlast4_simple_alignment_Base::e_bit_score ,
  CBlast4_simple_alignment_Base::e_num_identities , CBlast4_simple_alignment_Base::e_num_indels , CBlast4_simple_alignment_Base::e_full_query_range , CBlast4_simple_alignment_Base::e_full_subject_range
}
 
enum class  CBlast4_simple_results_Base::E_memberIndex { CBlast4_simple_results_Base::e__allMandatory = 0 , CBlast4_simple_results_Base::e_all_alignments }
 
enum  EBlast4_strand_type { eBlast4_strand_type_forward_strand = 1 , eBlast4_strand_type_reverse_strand = 2 , eBlast4_strand_type_both_strands = 3 }
 Access to EBlast4_strand_type's attributes (values, names) as defined in spec. More...
 
enum  CBlast4_subject_Base::E_Choice { CBlast4_subject_Base::e_not_set = 0 , CBlast4_subject_Base::e_Database , CBlast4_subject_Base::e_Sequences , CBlast4_subject_Base::e_Seq_loc_list }
 Choice variants. More...
 
enum  CBlast4_subject_Base::E_ChoiceStopper { CBlast4_subject_Base::e_MaxChoice = 4 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum class  CBlast4_task_info_Base::E_memberIndex { CBlast4_task_info_Base::e__allMandatory = 0 , CBlast4_task_info_Base::e_name , CBlast4_task_info_Base::e_documentation }
 
enum  CBlast4_value_Base::E_Choice {
  CBlast4_value_Base::e_not_set = 0 , CBlast4_value_Base::e_Big_integer , CBlast4_value_Base::e_Bioseq , CBlast4_value_Base::e_Boolean ,
  CBlast4_value_Base::e_Cutoff , CBlast4_value_Base::e_Integer , CBlast4_value_Base::e_Matrix , CBlast4_value_Base::e_Real ,
  CBlast4_value_Base::e_Seq_align , CBlast4_value_Base::e_Seq_id , CBlast4_value_Base::e_Seq_loc , CBlast4_value_Base::e_Strand_type ,
  CBlast4_value_Base::e_String , CBlast4_value_Base::e_Big_integer_list , CBlast4_value_Base::e_Bioseq_list , CBlast4_value_Base::e_Boolean_list ,
  CBlast4_value_Base::e_Cutoff_list , CBlast4_value_Base::e_Integer_list , CBlast4_value_Base::e_Matrix_list , CBlast4_value_Base::e_Real_list ,
  CBlast4_value_Base::e_Seq_align_list , CBlast4_value_Base::e_Seq_id_list , CBlast4_value_Base::e_Seq_loc_list , CBlast4_value_Base::e_Strand_type_list ,
  CBlast4_value_Base::e_String_list , CBlast4_value_Base::e_Bioseq_set , CBlast4_value_Base::e_Seq_align_set , CBlast4_value_Base::e_Query_mask
}
 Choice variants. More...
 
enum  CBlast4_value_Base::E_ChoiceStopper { CBlast4_value_Base::e_MaxChoice = 28 }
 Maximum+1 value of the choice variant enumerator. More...
 
enum class  CBlast4_finish_params_request_Base::E_memberIndex {
  CBlast4_finish_params_request_Base::e__allMandatory = 0 , CBlast4_finish_params_request_Base::e_program , CBlast4_finish_params_request_Base::e_service , CBlast4_finish_params_request_Base::e_paramset ,
  CBlast4_finish_params_request_Base::e_params
}
 
enum class  CBlast4_get_databases_ex_request_Base::E_memberIndex { CBlast4_get_databases_ex_request_Base::e__allMandatory = 0 , CBlast4_get_databases_ex_request_Base::e_params }
 
enum class  CBlast4_get_request_info_reply_Base::E_memberIndex {
  CBlast4_get_request_info_reply_Base::e__allMandatory = 0 , CBlast4_get_request_info_reply_Base::e_database , CBlast4_get_request_info_reply_Base::e_program , CBlast4_get_request_info_reply_Base::e_service ,
  CBlast4_get_request_info_reply_Base::e_created_by , CBlast4_get_request_info_reply_Base::e_queries , CBlast4_get_request_info_reply_Base::e_algorithm_options , CBlast4_get_request_info_reply_Base::e_program_options ,
  CBlast4_get_request_info_reply_Base::e_format_options , CBlast4_get_request_info_reply_Base::e_subjects
}
 
enum class  CBlast4_get_request_info_request_Base::E_memberIndex { CBlast4_get_request_info_request_Base::e__allMandatory = 0 , CBlast4_get_request_info_request_Base::e_request_id }
 
enum class  CBlast4_get_search_info_reply_Base::E_memberIndex { CBlast4_get_search_info_reply_Base::e__allMandatory = 0 , CBlast4_get_search_info_reply_Base::e_request_id , CBlast4_get_search_info_reply_Base::e_info }
 
enum class  CBlast4_get_search_info_request_Base::E_memberIndex { CBlast4_get_search_info_request_Base::e__allMandatory = 0 , CBlast4_get_search_info_request_Base::e_request_id , CBlast4_get_search_info_request_Base::e_info }
 
enum class  CBlast4_get_seq_parts_request_Base::E_memberIndex { CBlast4_get_seq_parts_request_Base::e__allMandatory = 0 , CBlast4_get_seq_parts_request_Base::e_database , CBlast4_get_seq_parts_request_Base::e_seq_locations }
 

Functions

 CBlast4_get_search_results_reply::CBlast4_get_search_results_reply (void)
 
 CBlast4_get_search_results_reply::~CBlast4_get_search_results_reply (void)
 
 CBlast4_get_search_results_reply::CBlast4_get_search_results_reply (const CBlast4_get_search_results_reply &value)
 
CBlast4_get_search_results_replyCBlast4_get_search_results_reply::operator= (const CBlast4_get_search_results_reply &value)
 
 CBlast4_get_search_results_reply_Base::CBlast4_get_search_results_reply_Base (void)
 
virtual CBlast4_get_search_results_reply_Base::~CBlast4_get_search_results_reply_Base (void)
 
 CBlast4_get_search_results_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_results_reply_Base::IsSetAlignments (void) const
 Check if a value has been assigned to Alignments data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetAlignments (void) const
 Check if it is safe to call GetAlignments method. More...
 
void CBlast4_get_search_results_reply_Base::ResetAlignments (void)
 Reset Alignments data member. More...
 
const TAlignmentsCBlast4_get_search_results_reply_Base::GetAlignments (void) const
 Get the Alignments member data. More...
 
void CBlast4_get_search_results_reply_Base::SetAlignments (TAlignments &value)
 Assign a value to Alignments data member. More...
 
TAlignmentsCBlast4_get_search_results_reply_Base::SetAlignments (void)
 Assign a value to Alignments data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetPhi_alignments (void) const
 Check if a value has been assigned to Phi_alignments data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetPhi_alignments (void) const
 Check if it is safe to call GetPhi_alignments method. More...
 
void CBlast4_get_search_results_reply_Base::ResetPhi_alignments (void)
 Reset Phi_alignments data member. More...
 
const TPhi_alignmentsCBlast4_get_search_results_reply_Base::GetPhi_alignments (void) const
 Get the Phi_alignments member data. More...
 
void CBlast4_get_search_results_reply_Base::SetPhi_alignments (TPhi_alignments &value)
 Assign a value to Phi_alignments data member. More...
 
TPhi_alignmentsCBlast4_get_search_results_reply_Base::SetPhi_alignments (void)
 Assign a value to Phi_alignments data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetMasks (void) const
 Masking locations for the query sequence(s). More...
 
bool CBlast4_get_search_results_reply_Base::CanGetMasks (void) const
 Check if it is safe to call GetMasks method. More...
 
void CBlast4_get_search_results_reply_Base::ResetMasks (void)
 Reset Masks data member. More...
 
const TMasksCBlast4_get_search_results_reply_Base::GetMasks (void) const
 Get the Masks member data. More...
 
TMasksCBlast4_get_search_results_reply_Base::SetMasks (void)
 Assign a value to Masks data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetKa_blocks (void) const
 Check if a value has been assigned to Ka_blocks data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetKa_blocks (void) const
 Check if it is safe to call GetKa_blocks method. More...
 
void CBlast4_get_search_results_reply_Base::ResetKa_blocks (void)
 Reset Ka_blocks data member. More...
 
const TKa_blocksCBlast4_get_search_results_reply_Base::GetKa_blocks (void) const
 Get the Ka_blocks member data. More...
 
TKa_blocksCBlast4_get_search_results_reply_Base::SetKa_blocks (void)
 Assign a value to Ka_blocks data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetSearch_stats (void) const
 Check if a value has been assigned to Search_stats data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetSearch_stats (void) const
 Check if it is safe to call GetSearch_stats method. More...
 
void CBlast4_get_search_results_reply_Base::ResetSearch_stats (void)
 Reset Search_stats data member. More...
 
const TSearch_statsCBlast4_get_search_results_reply_Base::GetSearch_stats (void) const
 Get the Search_stats member data. More...
 
TSearch_statsCBlast4_get_search_results_reply_Base::SetSearch_stats (void)
 Assign a value to Search_stats data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetPssm (void) const
 Check if a value has been assigned to Pssm data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetPssm (void) const
 Check if it is safe to call GetPssm method. More...
 
void CBlast4_get_search_results_reply_Base::ResetPssm (void)
 Reset Pssm data member. More...
 
const TPssmCBlast4_get_search_results_reply_Base::GetPssm (void) const
 Get the Pssm member data. More...
 
void CBlast4_get_search_results_reply_Base::SetPssm (TPssm &value)
 Assign a value to Pssm data member. More...
 
TPssmCBlast4_get_search_results_reply_Base::SetPssm (void)
 Assign a value to Pssm data member. More...
 
bool CBlast4_get_search_results_reply_Base::IsSetSimple_results (void) const
 Check if a value has been assigned to Simple_results data member. More...
 
bool CBlast4_get_search_results_reply_Base::CanGetSimple_results (void) const
 Check if it is safe to call GetSimple_results method. More...
 
void CBlast4_get_search_results_reply_Base::ResetSimple_results (void)
 Reset Simple_results data member. More...
 
const TSimple_resultsCBlast4_get_search_results_reply_Base::GetSimple_results (void) const
 Get the Simple_results member data. More...
 
void CBlast4_get_search_results_reply_Base::SetSimple_results (TSimple_results &value)
 Assign a value to Simple_results data member. More...
 
TSimple_resultsCBlast4_get_search_results_reply_Base::SetSimple_results (void)
 Assign a value to Simple_results data member. More...
 
virtual void CBlast4_get_search_results_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_results_reply_Base::CBlast4_get_search_results_reply_Base (const CBlast4_get_search_results_reply_Base &)
 
CBlast4_get_search_results_reply_BaseCBlast4_get_search_results_reply_Base::operator= (const CBlast4_get_search_results_reply_Base &)
 
 CBlast4_get_search_results_request::CBlast4_get_search_results_request (void)
 
 CBlast4_get_search_results_request::~CBlast4_get_search_results_request (void)
 
 CBlast4_get_search_results_request::CBlast4_get_search_results_request (const CBlast4_get_search_results_request &value)
 
CBlast4_get_search_results_requestCBlast4_get_search_results_request::operator= (const CBlast4_get_search_results_request &value)
 
 CBlast4_get_search_results_request_Base::CBlast4_get_search_results_request_Base (void)
 
virtual CBlast4_get_search_results_request_Base::~CBlast4_get_search_results_request_Base (void)
 
 CBlast4_get_search_results_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_results_request_Base::IsSetRequest_id (void) const
 The request ID of the BLAST search Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_search_results_request_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_search_results_request_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_search_results_request_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_search_results_request_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_search_results_request_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_search_results_request_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
bool CBlast4_get_search_results_request_Base::IsSetResult_types (void) const
 Logical OR of Blast4-result-types, assumes default if absent Check if a value has been assigned to Result_types data member. More...
 
bool CBlast4_get_search_results_request_Base::CanGetResult_types (void) const
 Check if it is safe to call GetResult_types method. More...
 
void CBlast4_get_search_results_request_Base::ResetResult_types (void)
 Reset Result_types data member. More...
 
TResult_types CBlast4_get_search_results_request_Base::GetResult_types (void) const
 Get the Result_types member data. More...
 
void CBlast4_get_search_results_request_Base::SetResult_types (TResult_types value)
 Assign a value to Result_types data member. More...
 
TResult_typesCBlast4_get_search_results_request_Base::SetResult_types (void)
 Assign a value to Result_types data member. More...
 
virtual void CBlast4_get_search_results_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_results_request_Base::CBlast4_get_search_results_request_Base (const CBlast4_get_search_results_request_Base &)
 
CBlast4_get_search_results_request_BaseCBlast4_get_search_results_request_Base::operator= (const CBlast4_get_search_results_request_Base &)
 
 CBlast4_get_search_status_reply::CBlast4_get_search_status_reply (void)
 
 CBlast4_get_search_status_reply::~CBlast4_get_search_status_reply (void)
 
 CBlast4_get_search_status_reply::CBlast4_get_search_status_reply (const CBlast4_get_search_status_reply &value)
 
CBlast4_get_search_status_replyCBlast4_get_search_status_reply::operator= (const CBlast4_get_search_status_reply &value)
 
 CBlast4_get_search_status_reply_Base::CBlast4_get_search_status_reply_Base (void)
 
virtual CBlast4_get_search_status_reply_Base::~CBlast4_get_search_status_reply_Base (void)
 
 CBlast4_get_search_status_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_status_reply_Base::IsSetStatus (void) const
 Check if a value has been assigned to Status data member. More...
 
bool CBlast4_get_search_status_reply_Base::CanGetStatus (void) const
 Check if it is safe to call GetStatus method. More...
 
void CBlast4_get_search_status_reply_Base::ResetStatus (void)
 Reset Status data member. More...
 
const TStatusCBlast4_get_search_status_reply_Base::GetStatus (void) const
 Get the Status member data. More...
 
void CBlast4_get_search_status_reply_Base::SetStatus (const TStatus &value)
 Assign a value to Status data member. More...
 
void CBlast4_get_search_status_reply_Base::SetStatus (TStatus &&value)
 
TStatusCBlast4_get_search_status_reply_Base::SetStatus (void)
 Assign a value to Status data member. More...
 
virtual void CBlast4_get_search_status_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_status_reply_Base::CBlast4_get_search_status_reply_Base (const CBlast4_get_search_status_reply_Base &)
 
CBlast4_get_search_status_reply_BaseCBlast4_get_search_status_reply_Base::operator= (const CBlast4_get_search_status_reply_Base &)
 
 CBlast4_get_search_status_request::CBlast4_get_search_status_request (void)
 
 CBlast4_get_search_status_request::~CBlast4_get_search_status_request (void)
 
 CBlast4_get_search_status_request::CBlast4_get_search_status_request (const CBlast4_get_search_status_request &value)
 
CBlast4_get_search_status_requestCBlast4_get_search_status_request::operator= (const CBlast4_get_search_status_request &value)
 
 CBlast4_get_search_status_request_Base::CBlast4_get_search_status_request_Base (void)
 
virtual CBlast4_get_search_status_request_Base::~CBlast4_get_search_status_request_Base (void)
 
 CBlast4_get_search_status_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_status_request_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_search_status_request_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_search_status_request_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_search_status_request_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_search_status_request_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_search_status_request_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_search_status_request_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
virtual void CBlast4_get_search_status_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_status_request_Base::CBlast4_get_search_status_request_Base (const CBlast4_get_search_status_request_Base &)
 
CBlast4_get_search_status_request_BaseCBlast4_get_search_status_request_Base::operator= (const CBlast4_get_search_status_request_Base &)
 
 CBlast4_get_search_strategy_reply::CBlast4_get_search_strategy_reply (void)
 
 CBlast4_get_search_strategy_reply_Base::CBlast4_get_search_strategy_reply_Base (void)
 
 CBlast4_get_search_strategy_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
const CBlast4_requestCBlast4_get_search_strategy_reply_Base::Get (void) const
 
CBlast4_requestCBlast4_get_search_strategy_reply_Base::Set (void)
 
 CBlast4_get_search_strategy_request::CBlast4_get_search_strategy_request (void)
 
 CBlast4_get_search_strategy_request::~CBlast4_get_search_strategy_request (void)
 
 CBlast4_get_search_strategy_request::CBlast4_get_search_strategy_request (const CBlast4_get_search_strategy_request &value)
 
CBlast4_get_search_strategy_requestCBlast4_get_search_strategy_request::operator= (const CBlast4_get_search_strategy_request &value)
 
 CBlast4_get_search_strategy_request_Base::CBlast4_get_search_strategy_request_Base (void)
 
virtual CBlast4_get_search_strategy_request_Base::~CBlast4_get_search_strategy_request_Base (void)
 
 CBlast4_get_search_strategy_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_strategy_request_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_search_strategy_request_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_search_strategy_request_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_search_strategy_request_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_search_strategy_request_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_search_strategy_request_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_search_strategy_request_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
virtual void CBlast4_get_search_strategy_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_strategy_request_Base::CBlast4_get_search_strategy_request_Base (const CBlast4_get_search_strategy_request_Base &)
 
CBlast4_get_search_strategy_request_BaseCBlast4_get_search_strategy_request_Base::operator= (const CBlast4_get_search_strategy_request_Base &)
 
 CBlast4_get_windowmasked_taxids_reply::CBlast4_get_windowmasked_taxids_reply (void)
 
 CBlast4_get_windowmasked_taxids_reply::~CBlast4_get_windowmasked_taxids_reply (void)
 
 CBlast4_get_windowmasked_taxids_reply::CBlast4_get_windowmasked_taxids_reply (const CBlast4_get_windowmasked_taxids_reply &value)
 
CBlast4_get_windowmasked_taxids_replyCBlast4_get_windowmasked_taxids_reply::operator= (const CBlast4_get_windowmasked_taxids_reply &value)
 
 CBlast4_get_windowmasked_taxids_reply_Base::CBlast4_get_windowmasked_taxids_reply_Base (void)
 
virtual CBlast4_get_windowmasked_taxids_reply_Base::~CBlast4_get_windowmasked_taxids_reply_Base (void)
 
 CBlast4_get_windowmasked_taxids_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_windowmasked_taxids_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_windowmasked_taxids_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_windowmasked_taxids_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_windowmasked_taxids_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_windowmasked_taxids_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_windowmasked_taxids_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_windowmasked_taxids_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_windowmasked_taxids_reply_Base::CBlast4_get_windowmasked_taxids_reply_Base (const CBlast4_get_windowmasked_taxids_reply_Base &)
 
CBlast4_get_windowmasked_taxids_reply_BaseCBlast4_get_windowmasked_taxids_reply_Base::operator= (const CBlast4_get_windowmasked_taxids_reply_Base &)
 
 CBlast4_alignments_for_query::CBlast4_alignments_for_query (void)
 
 CBlast4_alignments_for_query::~CBlast4_alignments_for_query (void)
 
 CBlast4_alignments_for_query::CBlast4_alignments_for_query (const CBlast4_alignments_for_query &value)
 
CBlast4_alignments_for_queryCBlast4_alignments_for_query::operator= (const CBlast4_alignments_for_query &value)
 
 CBlast4_alignments_for_query_Base::CBlast4_alignments_for_query_Base (void)
 
virtual CBlast4_alignments_for_query_Base::~CBlast4_alignments_for_query_Base (void)
 
 CBlast4_alignments_for_query_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_alignments_for_query_Base::IsSetQuery_id (void) const
 Query sequence identifier (present if query is not a local id in the SeqAlign) Check if a value has been assigned to Query_id data member. More...
 
bool CBlast4_alignments_for_query_Base::CanGetQuery_id (void) const
 Check if it is safe to call GetQuery_id method. More...
 
void CBlast4_alignments_for_query_Base::ResetQuery_id (void)
 Reset Query_id data member. More...
 
const TQuery_idCBlast4_alignments_for_query_Base::GetQuery_id (void) const
 Get the Query_id member data. More...
 
void CBlast4_alignments_for_query_Base::SetQuery_id (const TQuery_id &value)
 Assign a value to Query_id data member. More...
 
void CBlast4_alignments_for_query_Base::SetQuery_id (TQuery_id &&value)
 
TQuery_idCBlast4_alignments_for_query_Base::SetQuery_id (void)
 Assign a value to Query_id data member. More...
 
bool CBlast4_alignments_for_query_Base::IsSetAlignments (void) const
 All the alignments for this query Check if a value has been assigned to Alignments data member. More...
 
bool CBlast4_alignments_for_query_Base::CanGetAlignments (void) const
 Check if it is safe to call GetAlignments method. More...
 
void CBlast4_alignments_for_query_Base::ResetAlignments (void)
 Reset Alignments data member. More...
 
const TAlignmentsCBlast4_alignments_for_query_Base::GetAlignments (void) const
 Get the Alignments member data. More...
 
TAlignmentsCBlast4_alignments_for_query_Base::SetAlignments (void)
 Assign a value to Alignments data member. More...
 
virtual void CBlast4_alignments_for_query_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_alignments_for_query_Base::CBlast4_alignments_for_query_Base (const CBlast4_alignments_for_query_Base &)
 
CBlast4_alignments_for_query_BaseCBlast4_alignments_for_query_Base::operator= (const CBlast4_alignments_for_query_Base &)
 
 CBlast4_archive::CBlast4_archive (void)
 
 CBlast4_archive::~CBlast4_archive (void)
 
 CBlast4_archive::CBlast4_archive (const CBlast4_archive &value)
 
CBlast4_archiveCBlast4_archive::operator= (const CBlast4_archive &value)
 
 CBlast4_archive_Base::CBlast4_archive_Base (void)
 
virtual CBlast4_archive_Base::~CBlast4_archive_Base (void)
 
 CBlast4_archive_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_archive_Base::IsSetRequest (void) const
 Query and options Check if a value has been assigned to Request data member. More...
 
bool CBlast4_archive_Base::CanGetRequest (void) const
 Check if it is safe to call GetRequest method. More...
 
void CBlast4_archive_Base::ResetRequest (void)
 Reset Request data member. More...
 
const TRequestCBlast4_archive_Base::GetRequest (void) const
 Get the Request member data. More...
 
void CBlast4_archive_Base::SetRequest (TRequest &value)
 Assign a value to Request data member. More...
 
TRequestCBlast4_archive_Base::SetRequest (void)
 Assign a value to Request data member. More...
 
bool CBlast4_archive_Base::IsSetResults (void) const
 Results of search Check if a value has been assigned to Results data member. More...
 
bool CBlast4_archive_Base::CanGetResults (void) const
 Check if it is safe to call GetResults method. More...
 
void CBlast4_archive_Base::ResetResults (void)
 Reset Results data member. More...
 
const TResultsCBlast4_archive_Base::GetResults (void) const
 Get the Results member data. More...
 
void CBlast4_archive_Base::SetResults (TResults &value)
 Assign a value to Results data member. More...
 
TResultsCBlast4_archive_Base::SetResults (void)
 Assign a value to Results data member. More...
 
bool CBlast4_archive_Base::IsSetMessages (void) const
 Check if a value has been assigned to Messages data member. More...
 
bool CBlast4_archive_Base::CanGetMessages (void) const
 Check if it is safe to call GetMessages method. More...
 
void CBlast4_archive_Base::ResetMessages (void)
 Reset Messages data member. More...
 
const TMessagesCBlast4_archive_Base::GetMessages (void) const
 Get the Messages member data. More...
 
TMessagesCBlast4_archive_Base::SetMessages (void)
 Assign a value to Messages data member. More...
 
virtual void CBlast4_archive_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_archive_Base::CBlast4_archive_Base (const CBlast4_archive_Base &)
 
CBlast4_archive_BaseCBlast4_archive_Base::operator= (const CBlast4_archive_Base &)
 
 CBlast4_cutoff::CBlast4_cutoff (void)
 
 CBlast4_cutoff::~CBlast4_cutoff (void)
 
 CBlast4_cutoff::CBlast4_cutoff (const CBlast4_cutoff &value)
 
CBlast4_cutoffCBlast4_cutoff::operator= (const CBlast4_cutoff &value)
 
 CBlast4_cutoff_Base::CBlast4_cutoff_Base (void)
 
virtual CBlast4_cutoff_Base::~CBlast4_cutoff_Base (void)
 
 CBlast4_cutoff_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_cutoff_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_cutoff_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_cutoff_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_cutoff_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_cutoff_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_cutoff_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_cutoff_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_cutoff_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_cutoff_Base::IsE_value (void) const
 Check if variant E_value is selected. More...
 
TE_value CBlast4_cutoff_Base::GetE_value (void) const
 Get the variant data. More...
 
TE_valueCBlast4_cutoff_Base::SetE_value (void)
 Select the variant. More...
 
void CBlast4_cutoff_Base::SetE_value (TE_value value)
 Select the variant and set its data. More...
 
bool CBlast4_cutoff_Base::IsRaw_score (void) const
 Check if variant Raw_score is selected. More...
 
TRaw_score CBlast4_cutoff_Base::GetRaw_score (void) const
 Get the variant data. More...
 
TRaw_scoreCBlast4_cutoff_Base::SetRaw_score (void)
 Select the variant. More...
 
void CBlast4_cutoff_Base::SetRaw_score (TRaw_score value)
 Select the variant and set its data. More...
 
 CBlast4_cutoff_Base::CBlast4_cutoff_Base (const CBlast4_cutoff_Base &)
 
CBlast4_cutoff_BaseCBlast4_cutoff_Base::operator= (const CBlast4_cutoff_Base &)
 
void CBlast4_cutoff_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_database_Base::CBlast4_database_Base (void)
 
virtual CBlast4_database_Base::~CBlast4_database_Base (void)
 
 CBlast4_database_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_database_Base::IsSetName (void) const
 Check if a value has been assigned to Name data member. More...
 
bool CBlast4_database_Base::CanGetName (void) const
 Check if it is safe to call GetName method. More...
 
void CBlast4_database_Base::ResetName (void)
 Reset Name data member. More...
 
const TNameCBlast4_database_Base::GetName (void) const
 Get the Name member data. More...
 
void CBlast4_database_Base::SetName (const TName &value)
 Assign a value to Name data member. More...
 
void CBlast4_database_Base::SetName (TName &&value)
 
TNameCBlast4_database_Base::SetName (void)
 Assign a value to Name data member. More...
 
bool CBlast4_database_Base::IsSetType (void) const
 Check if a value has been assigned to Type data member. More...
 
bool CBlast4_database_Base::CanGetType (void) const
 Check if it is safe to call GetType method. More...
 
void CBlast4_database_Base::ResetType (void)
 Reset Type data member. More...
 
TType CBlast4_database_Base::GetType (void) const
 Get the Type member data. More...
 
void CBlast4_database_Base::SetType (TType value)
 Assign a value to Type data member. More...
 
TTypeCBlast4_database_Base::SetType (void)
 Assign a value to Type data member. More...
 
virtual void CBlast4_database_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_database_Base::CBlast4_database_Base (const CBlast4_database_Base &)
 
CBlast4_database_BaseCBlast4_database_Base::operator= (const CBlast4_database_Base &)
 
 CBlast4_database_info::CBlast4_database_info (void)
 
 CBlast4_database_info::~CBlast4_database_info (void)
 
 CBlast4_database_info::CBlast4_database_info (const CBlast4_database_info &value)
 
CBlast4_database_infoCBlast4_database_info::operator= (const CBlast4_database_info &value)
 
 CBlast4_database_info_Base::CBlast4_database_info_Base (void)
 
virtual CBlast4_database_info_Base::~CBlast4_database_info_Base (void)
 
 CBlast4_database_info_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_database_info_Base::IsSetDatabase (void) const
 Check if a value has been assigned to Database data member. More...
 
bool CBlast4_database_info_Base::CanGetDatabase (void) const
 Check if it is safe to call GetDatabase method. More...
 
void CBlast4_database_info_Base::ResetDatabase (void)
 Reset Database data member. More...
 
const TDatabaseCBlast4_database_info_Base::GetDatabase (void) const
 Get the Database member data. More...
 
void CBlast4_database_info_Base::SetDatabase (TDatabase &value)
 Assign a value to Database data member. More...
 
TDatabaseCBlast4_database_info_Base::SetDatabase (void)
 Assign a value to Database data member. More...
 
bool CBlast4_database_info_Base::IsSetDescription (void) const
 Check if a value has been assigned to Description data member. More...
 
bool CBlast4_database_info_Base::CanGetDescription (void) const
 Check if it is safe to call GetDescription method. More...
 
void CBlast4_database_info_Base::ResetDescription (void)
 Reset Description data member. More...
 
const TDescriptionCBlast4_database_info_Base::GetDescription (void) const
 Get the Description member data. More...
 
void CBlast4_database_info_Base::SetDescription (const TDescription &value)
 Assign a value to Description data member. More...
 
void CBlast4_database_info_Base::SetDescription (TDescription &&value)
 
TDescriptionCBlast4_database_info_Base::SetDescription (void)
 Assign a value to Description data member. More...
 
bool CBlast4_database_info_Base::IsSetLast_updated (void) const
 Check if a value has been assigned to Last_updated data member. More...
 
bool CBlast4_database_info_Base::CanGetLast_updated (void) const
 Check if it is safe to call GetLast_updated method. More...
 
void CBlast4_database_info_Base::ResetLast_updated (void)
 Reset Last_updated data member. More...
 
const TLast_updatedCBlast4_database_info_Base::GetLast_updated (void) const
 Get the Last_updated member data. More...
 
void CBlast4_database_info_Base::SetLast_updated (const TLast_updated &value)
 Assign a value to Last_updated data member. More...
 
void CBlast4_database_info_Base::SetLast_updated (TLast_updated &&value)
 
TLast_updatedCBlast4_database_info_Base::SetLast_updated (void)
 Assign a value to Last_updated data member. More...
 
bool CBlast4_database_info_Base::IsSetTotal_length (void) const
 Check if a value has been assigned to Total_length data member. More...
 
bool CBlast4_database_info_Base::CanGetTotal_length (void) const
 Check if it is safe to call GetTotal_length method. More...
 
void CBlast4_database_info_Base::ResetTotal_length (void)
 Reset Total_length data member. More...
 
TTotal_length CBlast4_database_info_Base::GetTotal_length (void) const
 Get the Total_length member data. More...
 
void CBlast4_database_info_Base::SetTotal_length (TTotal_length value)
 Assign a value to Total_length data member. More...
 
TTotal_lengthCBlast4_database_info_Base::SetTotal_length (void)
 Assign a value to Total_length data member. More...
 
bool CBlast4_database_info_Base::IsSetNum_sequences (void) const
 Check if a value has been assigned to Num_sequences data member. More...
 
bool CBlast4_database_info_Base::CanGetNum_sequences (void) const
 Check if it is safe to call GetNum_sequences method. More...
 
void CBlast4_database_info_Base::ResetNum_sequences (void)
 Reset Num_sequences data member. More...
 
TNum_sequences CBlast4_database_info_Base::GetNum_sequences (void) const
 Get the Num_sequences member data. More...
 
void CBlast4_database_info_Base::SetNum_sequences (TNum_sequences value)
 Assign a value to Num_sequences data member. More...
 
TNum_sequencesCBlast4_database_info_Base::SetNum_sequences (void)
 Assign a value to Num_sequences data member. More...
 
bool CBlast4_database_info_Base::IsSetSeqtech (void) const
 Check if a value has been assigned to Seqtech data member. More...
 
bool CBlast4_database_info_Base::CanGetSeqtech (void) const
 Check if it is safe to call GetSeqtech method. More...
 
void CBlast4_database_info_Base::ResetSeqtech (void)
 Reset Seqtech data member. More...
 
TSeqtech CBlast4_database_info_Base::GetSeqtech (void) const
 Get the Seqtech member data. More...
 
void CBlast4_database_info_Base::SetSeqtech (TSeqtech value)
 Assign a value to Seqtech data member. More...
 
TSeqtechCBlast4_database_info_Base::SetSeqtech (void)
 Assign a value to Seqtech data member. More...
 
bool CBlast4_database_info_Base::IsSetTaxid (void) const
 Check if a value has been assigned to Taxid data member. More...
 
bool CBlast4_database_info_Base::CanGetTaxid (void) const
 Check if it is safe to call GetTaxid method. More...
 
void CBlast4_database_info_Base::ResetTaxid (void)
 Reset Taxid data member. More...
 
TTaxid CBlast4_database_info_Base::GetTaxid (void) const
 Get the Taxid member data. More...
 
void CBlast4_database_info_Base::SetTaxid (TTaxid value)
 Assign a value to Taxid data member. More...
 
TTaxidCBlast4_database_info_Base::SetTaxid (void)
 Assign a value to Taxid data member. More...
 
bool CBlast4_database_info_Base::IsSetExtended (void) const
 Check if a value has been assigned to Extended data member. More...
 
bool CBlast4_database_info_Base::CanGetExtended (void) const
 Check if it is safe to call GetExtended method. More...
 
void CBlast4_database_info_Base::ResetExtended (void)
 Reset Extended data member. More...
 
const TExtendedCBlast4_database_info_Base::GetExtended (void) const
 Get the Extended member data. More...
 
void CBlast4_database_info_Base::SetExtended (TExtended &value)
 Assign a value to Extended data member. More...
 
TExtendedCBlast4_database_info_Base::SetExtended (void)
 Assign a value to Extended data member. More...
 
virtual void CBlast4_database_info_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_database_info_Base::CBlast4_database_info_Base (const CBlast4_database_info_Base &)
 
CBlast4_database_info_BaseCBlast4_database_info_Base::operator= (const CBlast4_database_info_Base &)
 
 CBlast4_error::CBlast4_error (void)
 
 CBlast4_error::~CBlast4_error (void)
 
 CBlast4_error::CBlast4_error (const CBlast4_error &value)
 
CBlast4_errorCBlast4_error::operator= (const CBlast4_error &value)
 
 CBlast4_error_Base::CBlast4_error_Base (void)
 
virtual CBlast4_error_Base::~CBlast4_error_Base (void)
 
 CBlast4_error_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_error_Base::IsSetCode (void) const
 This is an integer to allow for flexibility, but the values assigned should be of type Blast4-error-code Check if a value has been assigned to Code data member. More...
 
bool CBlast4_error_Base::CanGetCode (void) const
 Check if it is safe to call GetCode method. More...
 
void CBlast4_error_Base::ResetCode (void)
 Reset Code data member. More...
 
TCode CBlast4_error_Base::GetCode (void) const
 Get the Code member data. More...
 
void CBlast4_error_Base::SetCode (TCode value)
 Assign a value to Code data member. More...
 
TCodeCBlast4_error_Base::SetCode (void)
 Assign a value to Code data member. More...
 
bool CBlast4_error_Base::IsSetMessage (void) const
 Check if a value has been assigned to Message data member. More...
 
bool CBlast4_error_Base::CanGetMessage (void) const
 Check if it is safe to call GetMessage method. More...
 
void CBlast4_error_Base::ResetMessage (void)
 Reset Message data member. More...
 
const TMessageCBlast4_error_Base::GetMessage (void) const
 Get the Message member data. More...
 
void CBlast4_error_Base::SetMessage (const TMessage &value)
 Assign a value to Message data member. More...
 
void CBlast4_error_Base::SetMessage (TMessage &&value)
 
TMessageCBlast4_error_Base::SetMessage (void)
 Assign a value to Message data member. More...
 
virtual void CBlast4_error_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_error_Base::CBlast4_error_Base (const CBlast4_error_Base &)
 
CBlast4_error_BaseCBlast4_error_Base::operator= (const CBlast4_error_Base &)
 
 CBlast4_finish_params_reply::CBlast4_finish_params_reply (void)
 
 CBlast4_finish_params_reply_Base::CBlast4_finish_params_reply_Base (void)
 
 CBlast4_finish_params_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
const CBlast4_parametersCBlast4_finish_params_reply_Base::Get (void) const
 
CBlast4_parametersCBlast4_finish_params_reply_Base::Set (void)
 
 CBlast4_get_databases_ex_reply::CBlast4_get_databases_ex_reply (void)
 
 CBlast4_get_databases_ex_reply::~CBlast4_get_databases_ex_reply (void)
 
 CBlast4_get_databases_ex_reply::CBlast4_get_databases_ex_reply (const CBlast4_get_databases_ex_reply &value)
 
CBlast4_get_databases_ex_replyCBlast4_get_databases_ex_reply::operator= (const CBlast4_get_databases_ex_reply &value)
 
 CBlast4_get_databases_ex_reply_Base::CBlast4_get_databases_ex_reply_Base (void)
 
virtual CBlast4_get_databases_ex_reply_Base::~CBlast4_get_databases_ex_reply_Base (void)
 
 CBlast4_get_databases_ex_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_databases_ex_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_databases_ex_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_databases_ex_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_databases_ex_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_databases_ex_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_databases_ex_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_databases_ex_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_databases_ex_reply_Base::CBlast4_get_databases_ex_reply_Base (const CBlast4_get_databases_ex_reply_Base &)
 
CBlast4_get_databases_ex_reply_BaseCBlast4_get_databases_ex_reply_Base::operator= (const CBlast4_get_databases_ex_reply_Base &)
 
 CBlast4_get_databases_reply::CBlast4_get_databases_reply (void)
 
 CBlast4_get_databases_reply::~CBlast4_get_databases_reply (void)
 
 CBlast4_get_databases_reply::CBlast4_get_databases_reply (const CBlast4_get_databases_reply &value)
 
CBlast4_get_databases_replyCBlast4_get_databases_reply::operator= (const CBlast4_get_databases_reply &value)
 
 CBlast4_get_databases_reply_Base::CBlast4_get_databases_reply_Base (void)
 
virtual CBlast4_get_databases_reply_Base::~CBlast4_get_databases_reply_Base (void)
 
 CBlast4_get_databases_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_databases_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_databases_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_databases_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_databases_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_databases_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_databases_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_databases_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_databases_reply_Base::CBlast4_get_databases_reply_Base (const CBlast4_get_databases_reply_Base &)
 
CBlast4_get_databases_reply_BaseCBlast4_get_databases_reply_Base::operator= (const CBlast4_get_databases_reply_Base &)
 
 CBlast4_get_matrices_reply::CBlast4_get_matrices_reply (void)
 
 CBlast4_get_matrices_reply::~CBlast4_get_matrices_reply (void)
 
 CBlast4_get_matrices_reply::CBlast4_get_matrices_reply (const CBlast4_get_matrices_reply &value)
 
CBlast4_get_matrices_replyCBlast4_get_matrices_reply::operator= (const CBlast4_get_matrices_reply &value)
 
 CBlast4_get_matrices_reply_Base::CBlast4_get_matrices_reply_Base (void)
 
virtual CBlast4_get_matrices_reply_Base::~CBlast4_get_matrices_reply_Base (void)
 
 CBlast4_get_matrices_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_matrices_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_matrices_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_matrices_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_matrices_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_matrices_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_matrices_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_matrices_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_matrices_reply_Base::CBlast4_get_matrices_reply_Base (const CBlast4_get_matrices_reply_Base &)
 
CBlast4_get_matrices_reply_BaseCBlast4_get_matrices_reply_Base::operator= (const CBlast4_get_matrices_reply_Base &)
 
 CBlast4_get_parameters_reply::CBlast4_get_parameters_reply (void)
 
 CBlast4_get_parameters_reply::~CBlast4_get_parameters_reply (void)
 
 CBlast4_get_parameters_reply::CBlast4_get_parameters_reply (const CBlast4_get_parameters_reply &value)
 
CBlast4_get_parameters_replyCBlast4_get_parameters_reply::operator= (const CBlast4_get_parameters_reply &value)
 
 CBlast4_get_parameters_reply_Base::CBlast4_get_parameters_reply_Base (void)
 
virtual CBlast4_get_parameters_reply_Base::~CBlast4_get_parameters_reply_Base (void)
 
 CBlast4_get_parameters_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_parameters_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_parameters_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_parameters_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_parameters_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_parameters_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_parameters_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_parameters_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_parameters_reply_Base::CBlast4_get_parameters_reply_Base (const CBlast4_get_parameters_reply_Base &)
 
CBlast4_get_parameters_reply_BaseCBlast4_get_parameters_reply_Base::operator= (const CBlast4_get_parameters_reply_Base &)
 
 CBlast4_get_paramsets_reply::CBlast4_get_paramsets_reply (void)
 
 CBlast4_get_paramsets_reply::~CBlast4_get_paramsets_reply (void)
 
 CBlast4_get_paramsets_reply::CBlast4_get_paramsets_reply (const CBlast4_get_paramsets_reply &value)
 
CBlast4_get_paramsets_replyCBlast4_get_paramsets_reply::operator= (const CBlast4_get_paramsets_reply &value)
 
 CBlast4_get_paramsets_reply_Base::CBlast4_get_paramsets_reply_Base (void)
 
virtual CBlast4_get_paramsets_reply_Base::~CBlast4_get_paramsets_reply_Base (void)
 
 CBlast4_get_paramsets_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_paramsets_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_paramsets_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_paramsets_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_paramsets_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_paramsets_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_paramsets_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_paramsets_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_paramsets_reply_Base::CBlast4_get_paramsets_reply_Base (const CBlast4_get_paramsets_reply_Base &)
 
CBlast4_get_paramsets_reply_BaseCBlast4_get_paramsets_reply_Base::operator= (const CBlast4_get_paramsets_reply_Base &)
 
 CBlast4_get_programs_reply::CBlast4_get_programs_reply (void)
 
 CBlast4_get_programs_reply::~CBlast4_get_programs_reply (void)
 
 CBlast4_get_programs_reply::CBlast4_get_programs_reply (const CBlast4_get_programs_reply &value)
 
CBlast4_get_programs_replyCBlast4_get_programs_reply::operator= (const CBlast4_get_programs_reply &value)
 
 CBlast4_get_programs_reply_Base::CBlast4_get_programs_reply_Base (void)
 
virtual CBlast4_get_programs_reply_Base::~CBlast4_get_programs_reply_Base (void)
 
 CBlast4_get_programs_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_programs_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_programs_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_programs_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_programs_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_programs_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_programs_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_programs_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_programs_reply_Base::CBlast4_get_programs_reply_Base (const CBlast4_get_programs_reply_Base &)
 
CBlast4_get_programs_reply_BaseCBlast4_get_programs_reply_Base::operator= (const CBlast4_get_programs_reply_Base &)
 
 CBlast4_get_queries_reply::CBlast4_get_queries_reply (void)
 
 CBlast4_get_queries_reply::~CBlast4_get_queries_reply (void)
 
 CBlast4_get_queries_reply::CBlast4_get_queries_reply (const CBlast4_get_queries_reply &value)
 
CBlast4_get_queries_replyCBlast4_get_queries_reply::operator= (const CBlast4_get_queries_reply &value)
 
 CBlast4_get_queries_reply_Base::CBlast4_get_queries_reply_Base (void)
 
virtual CBlast4_get_queries_reply_Base::~CBlast4_get_queries_reply_Base (void)
 
 CBlast4_get_queries_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_queries_reply_Base::IsSetQueries (void) const
 Check if a value has been assigned to Queries data member. More...
 
bool CBlast4_get_queries_reply_Base::CanGetQueries (void) const
 Check if it is safe to call GetQueries method. More...
 
void CBlast4_get_queries_reply_Base::ResetQueries (void)
 Reset Queries data member. More...
 
const TQueriesCBlast4_get_queries_reply_Base::GetQueries (void) const
 Get the Queries member data. More...
 
void CBlast4_get_queries_reply_Base::SetQueries (TQueries &value)
 Assign a value to Queries data member. More...
 
TQueriesCBlast4_get_queries_reply_Base::SetQueries (void)
 Assign a value to Queries data member. More...
 
virtual void CBlast4_get_queries_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_queries_reply_Base::CBlast4_get_queries_reply_Base (const CBlast4_get_queries_reply_Base &)
 
CBlast4_get_queries_reply_BaseCBlast4_get_queries_reply_Base::operator= (const CBlast4_get_queries_reply_Base &)
 
 CBlast4_get_seq_parts_reply::CBlast4_get_seq_parts_reply (void)
 
 CBlast4_get_seq_parts_reply::~CBlast4_get_seq_parts_reply (void)
 
 CBlast4_get_seq_parts_reply::CBlast4_get_seq_parts_reply (const CBlast4_get_seq_parts_reply &value)
 
CBlast4_get_seq_parts_replyCBlast4_get_seq_parts_reply::operator= (const CBlast4_get_seq_parts_reply &value)
 
 CBlast4_get_seq_parts_reply_Base::CBlast4_get_seq_parts_reply_Base (void)
 
virtual CBlast4_get_seq_parts_reply_Base::~CBlast4_get_seq_parts_reply_Base (void)
 
 CBlast4_get_seq_parts_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_seq_parts_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_seq_parts_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_seq_parts_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_seq_parts_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_seq_parts_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_seq_parts_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_seq_parts_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_seq_parts_reply_Base::CBlast4_get_seq_parts_reply_Base (const CBlast4_get_seq_parts_reply_Base &)
 
CBlast4_get_seq_parts_reply_BaseCBlast4_get_seq_parts_reply_Base::operator= (const CBlast4_get_seq_parts_reply_Base &)
 
 CBlast4_get_sequences_request::CBlast4_get_sequences_request (void)
 
 CBlast4_get_sequences_request::~CBlast4_get_sequences_request (void)
 
 CBlast4_get_sequences_request::CBlast4_get_sequences_request (const CBlast4_get_sequences_request &value)
 
CBlast4_get_sequences_requestCBlast4_get_sequences_request::operator= (const CBlast4_get_sequences_request &value)
 
 CBlast4_get_sequences_request_Base::CBlast4_get_sequences_request_Base (void)
 
virtual CBlast4_get_sequences_request_Base::~CBlast4_get_sequences_request_Base (void)
 
 CBlast4_get_sequences_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_sequences_request_Base::IsSetDatabase (void) const
 Name of the BLAST database from which to retrieve the sequence data Check if a value has been assigned to Database data member. More...
 
bool CBlast4_get_sequences_request_Base::CanGetDatabase (void) const
 Check if it is safe to call GetDatabase method. More...
 
void CBlast4_get_sequences_request_Base::ResetDatabase (void)
 Reset Database data member. More...
 
const TDatabaseCBlast4_get_sequences_request_Base::GetDatabase (void) const
 Get the Database member data. More...
 
void CBlast4_get_sequences_request_Base::SetDatabase (TDatabase &value)
 Assign a value to Database data member. More...
 
TDatabaseCBlast4_get_sequences_request_Base::SetDatabase (void)
 Assign a value to Database data member. More...
 
bool CBlast4_get_sequences_request_Base::IsSetSeq_ids (void) const
 Sequence identifiers for the sequence to get Check if a value has been assigned to Seq_ids data member. More...
 
bool CBlast4_get_sequences_request_Base::CanGetSeq_ids (void) const
 Check if it is safe to call GetSeq_ids method. More...
 
void CBlast4_get_sequences_request_Base::ResetSeq_ids (void)
 Reset Seq_ids data member. More...
 
const TSeq_idsCBlast4_get_sequences_request_Base::GetSeq_ids (void) const
 Get the Seq_ids member data. More...
 
TSeq_idsCBlast4_get_sequences_request_Base::SetSeq_ids (void)
 Assign a value to Seq_ids data member. More...
 
bool CBlast4_get_sequences_request_Base::IsSetSkip_seq_data (void) const
 Determines whether the returned Bioseqs should contain the sequence data or not Check if a value has been assigned to Skip_seq_data data member. More...
 
bool CBlast4_get_sequences_request_Base::CanGetSkip_seq_data (void) const
 Check if it is safe to call GetSkip_seq_data method. More...
 
void CBlast4_get_sequences_request_Base::ResetSkip_seq_data (void)
 Reset Skip_seq_data data member. More...
 
void CBlast4_get_sequences_request_Base::SetDefaultSkip_seq_data (void)
 Assign default value to Skip_seq_data data member. More...
 
TSkip_seq_data CBlast4_get_sequences_request_Base::GetSkip_seq_data (void) const
 Get the Skip_seq_data member data. More...
 
void CBlast4_get_sequences_request_Base::SetSkip_seq_data (TSkip_seq_data value)
 Assign a value to Skip_seq_data data member. More...
 
TSkip_seq_dataCBlast4_get_sequences_request_Base::SetSkip_seq_data (void)
 Assign a value to Skip_seq_data data member. More...
 
bool CBlast4_get_sequences_request_Base::IsSetTarget_only (void) const
 Determines whether or not the defline of the returned Bioseqs should contain only the requested seq id. More...
 
bool CBlast4_get_sequences_request_Base::CanGetTarget_only (void) const
 Check if it is safe to call GetTarget_only method. More...
 
void CBlast4_get_sequences_request_Base::ResetTarget_only (void)
 Reset Target_only data member. More...
 
TTarget_only CBlast4_get_sequences_request_Base::GetTarget_only (void) const
 Get the Target_only member data. More...
 
void CBlast4_get_sequences_request_Base::SetTarget_only (TTarget_only value)
 Assign a value to Target_only data member. More...
 
TTarget_onlyCBlast4_get_sequences_request_Base::SetTarget_only (void)
 Assign a value to Target_only data member. More...
 
virtual void CBlast4_get_sequences_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_sequences_request_Base::CBlast4_get_sequences_request_Base (const CBlast4_get_sequences_request_Base &)
 
CBlast4_get_sequences_request_BaseCBlast4_get_sequences_request_Base::operator= (const CBlast4_get_sequences_request_Base &)
 
 CBlast4_get_sequences_reply::CBlast4_get_sequences_reply (void)
 
 CBlast4_get_sequences_reply::~CBlast4_get_sequences_reply (void)
 
 CBlast4_get_sequences_reply::CBlast4_get_sequences_reply (const CBlast4_get_sequences_reply &value)
 
CBlast4_get_sequences_replyCBlast4_get_sequences_reply::operator= (const CBlast4_get_sequences_reply &value)
 
 CBlast4_get_sequences_reply_Base::CBlast4_get_sequences_reply_Base (void)
 
virtual CBlast4_get_sequences_reply_Base::~CBlast4_get_sequences_reply_Base (void)
 
 CBlast4_get_sequences_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_sequences_reply_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_get_sequences_reply_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_get_sequences_reply_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_get_sequences_reply_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_get_sequences_reply_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_get_sequences_reply_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_get_sequences_reply_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_get_sequences_reply_Base::CBlast4_get_sequences_reply_Base (const CBlast4_get_sequences_reply_Base &)
 
CBlast4_get_sequences_reply_BaseCBlast4_get_sequences_reply_Base::operator= (const CBlast4_get_sequences_reply_Base &)
 
 CBlast4_ka_block::CBlast4_ka_block (void)
 
 CBlast4_ka_block::~CBlast4_ka_block (void)
 
 CBlast4_ka_block::CBlast4_ka_block (const CBlast4_ka_block &value)
 
CBlast4_ka_blockCBlast4_ka_block::operator= (const CBlast4_ka_block &value)
 
 CBlast4_ka_block_Base::CBlast4_ka_block_Base (void)
 
virtual CBlast4_ka_block_Base::~CBlast4_ka_block_Base (void)
 
 CBlast4_ka_block_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_ka_block_Base::IsSetLambda (void) const
 Check if a value has been assigned to Lambda data member. More...
 
bool CBlast4_ka_block_Base::CanGetLambda (void) const
 Check if it is safe to call GetLambda method. More...
 
void CBlast4_ka_block_Base::ResetLambda (void)
 Reset Lambda data member. More...
 
TLambda CBlast4_ka_block_Base::GetLambda (void) const
 Get the Lambda member data. More...
 
void CBlast4_ka_block_Base::SetLambda (TLambda value)
 Assign a value to Lambda data member. More...
 
TLambdaCBlast4_ka_block_Base::SetLambda (void)
 Assign a value to Lambda data member. More...
 
bool CBlast4_ka_block_Base::IsSetK (void) const
 Check if a value has been assigned to K data member. More...
 
bool CBlast4_ka_block_Base::CanGetK (void) const
 Check if it is safe to call GetK method. More...
 
void CBlast4_ka_block_Base::ResetK (void)
 Reset K data member. More...
 
TK CBlast4_ka_block_Base::GetK (void) const
 Get the K member data. More...
 
void CBlast4_ka_block_Base::SetK (TK value)
 Assign a value to K data member. More...
 
TKCBlast4_ka_block_Base::SetK (void)
 Assign a value to K data member. More...
 
bool CBlast4_ka_block_Base::IsSetH (void) const
 Check if a value has been assigned to H data member. More...
 
bool CBlast4_ka_block_Base::CanGetH (void) const
 Check if it is safe to call GetH method. More...
 
void CBlast4_ka_block_Base::ResetH (void)
 Reset H data member. More...
 
TH CBlast4_ka_block_Base::GetH (void) const
 Get the H member data. More...
 
void CBlast4_ka_block_Base::SetH (TH value)
 Assign a value to H data member. More...
 
THCBlast4_ka_block_Base::SetH (void)
 Assign a value to H data member. More...
 
bool CBlast4_ka_block_Base::IsSetGapped (void) const
 Check if a value has been assigned to Gapped data member. More...
 
bool CBlast4_ka_block_Base::CanGetGapped (void) const
 Check if it is safe to call GetGapped method. More...
 
void CBlast4_ka_block_Base::ResetGapped (void)
 Reset Gapped data member. More...
 
TGapped CBlast4_ka_block_Base::GetGapped (void) const
 Get the Gapped member data. More...
 
void CBlast4_ka_block_Base::SetGapped (TGapped value)
 Assign a value to Gapped data member. More...
 
TGappedCBlast4_ka_block_Base::SetGapped (void)
 Assign a value to Gapped data member. More...
 
virtual void CBlast4_ka_block_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_ka_block_Base::CBlast4_ka_block_Base (const CBlast4_ka_block_Base &)
 
CBlast4_ka_block_BaseCBlast4_ka_block_Base::operator= (const CBlast4_ka_block_Base &)
 
 CBlast4_mask::CBlast4_mask (void)
 
 CBlast4_mask::~CBlast4_mask (void)
 
 CBlast4_mask::CBlast4_mask (const CBlast4_mask &value)
 
CBlast4_maskCBlast4_mask::operator= (const CBlast4_mask &value)
 
 CBlast4_mask_Base::CBlast4_mask_Base (void)
 
virtual CBlast4_mask_Base::~CBlast4_mask_Base (void)
 
 CBlast4_mask_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_mask_Base::IsSetLocations (void) const
 Check if a value has been assigned to Locations data member. More...
 
bool CBlast4_mask_Base::CanGetLocations (void) const
 Check if it is safe to call GetLocations method. More...
 
void CBlast4_mask_Base::ResetLocations (void)
 Reset Locations data member. More...
 
const TLocationsCBlast4_mask_Base::GetLocations (void) const
 Get the Locations member data. More...
 
TLocationsCBlast4_mask_Base::SetLocations (void)
 Assign a value to Locations data member. More...
 
bool CBlast4_mask_Base::IsSetFrame (void) const
 Check if a value has been assigned to Frame data member. More...
 
bool CBlast4_mask_Base::CanGetFrame (void) const
 Check if it is safe to call GetFrame method. More...
 
void CBlast4_mask_Base::ResetFrame (void)
 Reset Frame data member. More...
 
TFrame CBlast4_mask_Base::GetFrame (void) const
 Get the Frame member data. More...
 
void CBlast4_mask_Base::SetFrame (TFrame value)
 Assign a value to Frame data member. More...
 
TFrameCBlast4_mask_Base::SetFrame (void)
 Assign a value to Frame data member. More...
 
virtual void CBlast4_mask_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_mask_Base::CBlast4_mask_Base (const CBlast4_mask_Base &)
 
CBlast4_mask_BaseCBlast4_mask_Base::operator= (const CBlast4_mask_Base &)
 
 CBlast4_matrix_id::CBlast4_matrix_id (void)
 
 CBlast4_matrix_id::~CBlast4_matrix_id (void)
 
 CBlast4_matrix_id::CBlast4_matrix_id (const CBlast4_matrix_id &value)
 
CBlast4_matrix_idCBlast4_matrix_id::operator= (const CBlast4_matrix_id &value)
 
 CBlast4_matrix_id_Base::CBlast4_matrix_id_Base (void)
 
virtual CBlast4_matrix_id_Base::~CBlast4_matrix_id_Base (void)
 
 CBlast4_matrix_id_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_matrix_id_Base::IsSetResidue_type (void) const
 Check if a value has been assigned to Residue_type data member. More...
 
bool CBlast4_matrix_id_Base::CanGetResidue_type (void) const
 Check if it is safe to call GetResidue_type method. More...
 
void CBlast4_matrix_id_Base::ResetResidue_type (void)
 Reset Residue_type data member. More...
 
TResidue_type CBlast4_matrix_id_Base::GetResidue_type (void) const
 Get the Residue_type member data. More...
 
void CBlast4_matrix_id_Base::SetResidue_type (TResidue_type value)
 Assign a value to Residue_type data member. More...
 
TResidue_typeCBlast4_matrix_id_Base::SetResidue_type (void)
 Assign a value to Residue_type data member. More...
 
bool CBlast4_matrix_id_Base::IsSetName (void) const
 Check if a value has been assigned to Name data member. More...
 
bool CBlast4_matrix_id_Base::CanGetName (void) const
 Check if it is safe to call GetName method. More...
 
void CBlast4_matrix_id_Base::ResetName (void)
 Reset Name data member. More...
 
const TNameCBlast4_matrix_id_Base::GetName (void) const
 Get the Name member data. More...
 
void CBlast4_matrix_id_Base::SetName (const TName &value)
 Assign a value to Name data member. More...
 
void CBlast4_matrix_id_Base::SetName (TName &&value)
 
TNameCBlast4_matrix_id_Base::SetName (void)
 Assign a value to Name data member. More...
 
virtual void CBlast4_matrix_id_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_matrix_id_Base::CBlast4_matrix_id_Base (const CBlast4_matrix_id_Base &)
 
CBlast4_matrix_id_BaseCBlast4_matrix_id_Base::operator= (const CBlast4_matrix_id_Base &)
 
 CBlast4_parameter::CBlast4_parameter (void)
 
 CBlast4_parameter::~CBlast4_parameter (void)
 
 CBlast4_parameter::CBlast4_parameter (const CBlast4_parameter &value)
 
CBlast4_parameterCBlast4_parameter::operator= (const CBlast4_parameter &value)
 
 CBlast4_parameter_Base::CBlast4_parameter_Base (void)
 
virtual CBlast4_parameter_Base::~CBlast4_parameter_Base (void)
 
 CBlast4_parameter_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_parameter_Base::IsSetName (void) const
 Check if a value has been assigned to Name data member. More...
 
bool CBlast4_parameter_Base::CanGetName (void) const
 Check if it is safe to call GetName method. More...
 
void CBlast4_parameter_Base::ResetName (void)
 Reset Name data member. More...
 
const TNameCBlast4_parameter_Base::GetName (void) const
 Get the Name member data. More...
 
void CBlast4_parameter_Base::SetName (const TName &value)
 Assign a value to Name data member. More...
 
void CBlast4_parameter_Base::SetName (TName &&value)
 
TNameCBlast4_parameter_Base::SetName (void)
 Assign a value to Name data member. More...
 
bool CBlast4_parameter_Base::IsSetValue (void) const
 Check if a value has been assigned to Value data member. More...
 
bool CBlast4_parameter_Base::CanGetValue (void) const
 Check if it is safe to call GetValue method. More...
 
void CBlast4_parameter_Base::ResetValue (void)
 Reset Value data member. More...
 
const TValueCBlast4_parameter_Base::GetValue (void) const
 Get the Value member data. More...
 
void CBlast4_parameter_Base::SetValue (TValue &value)
 Assign a value to Value data member. More...
 
TValueCBlast4_parameter_Base::SetValue (void)
 Assign a value to Value data member. More...
 
virtual void CBlast4_parameter_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_parameter_Base::CBlast4_parameter_Base (const CBlast4_parameter_Base &)
 
CBlast4_parameter_BaseCBlast4_parameter_Base::operator= (const CBlast4_parameter_Base &)
 
 CBlast4_parameter_info::CBlast4_parameter_info (void)
 
 CBlast4_parameter_info::~CBlast4_parameter_info (void)
 
 CBlast4_parameter_info::CBlast4_parameter_info (const CBlast4_parameter_info &value)
 
CBlast4_parameter_infoCBlast4_parameter_info::operator= (const CBlast4_parameter_info &value)
 
 CBlast4_parameter_info_Base::CBlast4_parameter_info_Base (void)
 
virtual CBlast4_parameter_info_Base::~CBlast4_parameter_info_Base (void)
 
 CBlast4_parameter_info_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_parameter_info_Base::IsSetName (void) const
 Check if a value has been assigned to Name data member. More...
 
bool CBlast4_parameter_info_Base::CanGetName (void) const
 Check if it is safe to call GetName method. More...
 
void CBlast4_parameter_info_Base::ResetName (void)
 Reset Name data member. More...
 
const TNameCBlast4_parameter_info_Base::GetName (void) const
 Get the Name member data. More...
 
void CBlast4_parameter_info_Base::SetName (const TName &value)
 Assign a value to Name data member. More...
 
void CBlast4_parameter_info_Base::SetName (TName &&value)
 
TNameCBlast4_parameter_info_Base::SetName (void)
 Assign a value to Name data member. More...
 
bool CBlast4_parameter_info_Base::IsSetType (void) const
 Check if a value has been assigned to Type data member. More...
 
bool CBlast4_parameter_info_Base::CanGetType (void) const
 Check if it is safe to call GetType method. More...
 
void CBlast4_parameter_info_Base::ResetType (void)
 Reset Type data member. More...
 
const TTypeCBlast4_parameter_info_Base::GetType (void) const
 Get the Type member data. More...
 
void CBlast4_parameter_info_Base::SetType (const TType &value)
 Assign a value to Type data member. More...
 
void CBlast4_parameter_info_Base::SetType (TType &&value)
 
TTypeCBlast4_parameter_info_Base::SetType (void)
 Assign a value to Type data member. More...
 
virtual void CBlast4_parameter_info_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_parameter_info_Base::CBlast4_parameter_info_Base (const CBlast4_parameter_info_Base &)
 
CBlast4_parameter_info_BaseCBlast4_parameter_info_Base::operator= (const CBlast4_parameter_info_Base &)
 
 CBlast4_parameters_Base::CBlast4_parameters_Base (void)
 
virtual CBlast4_parameters_Base::~CBlast4_parameters_Base (void)
 
 CBlast4_parameters_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_parameters_Base::IsSet (void) const
 Check if a value has been assigned to data member. More...
 
bool CBlast4_parameters_Base::CanGet (void) const
 Check if it is safe to call Get method. More...
 
void CBlast4_parameters_Base::Reset (void)
 Reset data member. More...
 
const TdataCBlast4_parameters_Base::Get (void) const
 Get the member data. More...
 
TdataCBlast4_parameters_Base::Set (void)
 Assign a value to data member. More...
 
 CBlast4_parameters_Base::operator const Tdata & (void) const
 Conversion operator to 'const Tdata' type. More...
 
 CBlast4_parameters_Base::operator Tdata & (void)
 Conversion operator to 'Tdata' type. More...
 
 CBlast4_parameters_Base::CBlast4_parameters_Base (const CBlast4_parameters_Base &)
 
CBlast4_parameters_BaseCBlast4_parameters_Base::operator= (const CBlast4_parameters_Base &)
 
 CBlast4_phi_alignments::CBlast4_phi_alignments (void)
 
 CBlast4_phi_alignments::~CBlast4_phi_alignments (void)
 
 CBlast4_phi_alignments::CBlast4_phi_alignments (const CBlast4_phi_alignments &value)
 
CBlast4_phi_alignmentsCBlast4_phi_alignments::operator= (const CBlast4_phi_alignments &value)
 
 CBlast4_phi_alignments_Base::CBlast4_phi_alignments_Base (void)
 
virtual CBlast4_phi_alignments_Base::~CBlast4_phi_alignments_Base (void)
 
 CBlast4_phi_alignments_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_phi_alignments_Base::IsSetNum_alignments (void) const
 Check if a value has been assigned to Num_alignments data member. More...
 
bool CBlast4_phi_alignments_Base::CanGetNum_alignments (void) const
 Check if it is safe to call GetNum_alignments method. More...
 
void CBlast4_phi_alignments_Base::ResetNum_alignments (void)
 Reset Num_alignments data member. More...
 
TNum_alignments CBlast4_phi_alignments_Base::GetNum_alignments (void) const
 Get the Num_alignments member data. More...
 
void CBlast4_phi_alignments_Base::SetNum_alignments (TNum_alignments value)
 Assign a value to Num_alignments data member. More...
 
TNum_alignmentsCBlast4_phi_alignments_Base::SetNum_alignments (void)
 Assign a value to Num_alignments data member. More...
 
bool CBlast4_phi_alignments_Base::IsSetSeq_locs (void) const
 Check if a value has been assigned to Seq_locs data member. More...
 
bool CBlast4_phi_alignments_Base::CanGetSeq_locs (void) const
 Check if it is safe to call GetSeq_locs method. More...
 
void CBlast4_phi_alignments_Base::ResetSeq_locs (void)
 Reset Seq_locs data member. More...
 
const TSeq_locsCBlast4_phi_alignments_Base::GetSeq_locs (void) const
 Get the Seq_locs member data. More...
 
TSeq_locsCBlast4_phi_alignments_Base::SetSeq_locs (void)
 Assign a value to Seq_locs data member. More...
 
virtual void CBlast4_phi_alignments_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_phi_alignments_Base::CBlast4_phi_alignments_Base (const CBlast4_phi_alignments_Base &)
 
CBlast4_phi_alignments_BaseCBlast4_phi_alignments_Base::operator= (const CBlast4_phi_alignments_Base &)
 
 CBlast4_program_info::CBlast4_program_info (void)
 
 CBlast4_program_info::~CBlast4_program_info (void)
 
 CBlast4_program_info::CBlast4_program_info (const CBlast4_program_info &value)
 
CBlast4_program_infoCBlast4_program_info::operator= (const CBlast4_program_info &value)
 
 CBlast4_program_info_Base::CBlast4_program_info_Base (void)
 
virtual CBlast4_program_info_Base::~CBlast4_program_info_Base (void)
 
 CBlast4_program_info_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_program_info_Base::IsSetProgram (void) const
 Check if a value has been assigned to Program data member. More...
 
bool CBlast4_program_info_Base::CanGetProgram (void) const
 Check if it is safe to call GetProgram method. More...
 
void CBlast4_program_info_Base::ResetProgram (void)
 Reset Program data member. More...
 
const TProgramCBlast4_program_info_Base::GetProgram (void) const
 Get the Program member data. More...
 
void CBlast4_program_info_Base::SetProgram (const TProgram &value)
 Assign a value to Program data member. More...
 
void CBlast4_program_info_Base::SetProgram (TProgram &&value)
 
TProgramCBlast4_program_info_Base::SetProgram (void)
 Assign a value to Program data member. More...
 
bool CBlast4_program_info_Base::IsSetServices (void) const
 Check if a value has been assigned to Services data member. More...
 
bool CBlast4_program_info_Base::CanGetServices (void) const
 Check if it is safe to call GetServices method. More...
 
void CBlast4_program_info_Base::ResetServices (void)
 Reset Services data member. More...
 
const TServicesCBlast4_program_info_Base::GetServices (void) const
 Get the Services member data. More...
 
TServicesCBlast4_program_info_Base::SetServices (void)
 Assign a value to Services data member. More...
 
virtual void CBlast4_program_info_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_program_info_Base::CBlast4_program_info_Base (const CBlast4_program_info_Base &)
 
CBlast4_program_info_BaseCBlast4_program_info_Base::operator= (const CBlast4_program_info_Base &)
 
 CBlast4_queries_Base::CBlast4_queries_Base (void)
 
virtual CBlast4_queries_Base::~CBlast4_queries_Base (void)
 
 CBlast4_queries_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_queries_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_queries_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_queries_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_queries_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_queries_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_queries_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_queries_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_queries_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_queries_Base::IsPssm (void) const
 Check if variant Pssm is selected. More...
 
const TPssmCBlast4_queries_Base::GetPssm (void) const
 Get the variant data. More...
 
TPssmCBlast4_queries_Base::SetPssm (void)
 Select the variant. More...
 
void CBlast4_queries_Base::SetPssm (TPssm &value)
 Select the variant and set its data. More...
 
bool CBlast4_queries_Base::IsSeq_loc_list (void) const
 Check if variant Seq_loc_list is selected. More...
 
const TSeq_loc_listCBlast4_queries_Base::GetSeq_loc_list (void) const
 Get the variant data. More...
 
TSeq_loc_listCBlast4_queries_Base::SetSeq_loc_list (void)
 Select the variant. More...
 
bool CBlast4_queries_Base::IsBioseq_set (void) const
 Check if variant Bioseq_set is selected. More...
 
const TBioseq_setCBlast4_queries_Base::GetBioseq_set (void) const
 Get the variant data. More...
 
TBioseq_setCBlast4_queries_Base::SetBioseq_set (void)
 Select the variant. More...
 
void CBlast4_queries_Base::SetBioseq_set (TBioseq_set &value)
 Select the variant and set its data. More...
 
 CBlast4_queries_Base::CBlast4_queries_Base (const CBlast4_queries_Base &)
 
CBlast4_queries_BaseCBlast4_queries_Base::operator= (const CBlast4_queries_Base &)
 
void CBlast4_queries_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_queue_search_reply::CBlast4_queue_search_reply (void)
 
 CBlast4_queue_search_reply::~CBlast4_queue_search_reply (void)
 
 CBlast4_queue_search_reply::CBlast4_queue_search_reply (const CBlast4_queue_search_reply &value)
 
CBlast4_queue_search_replyCBlast4_queue_search_reply::operator= (const CBlast4_queue_search_reply &value)
 
 CBlast4_queue_search_reply_Base::CBlast4_queue_search_reply_Base (void)
 
virtual CBlast4_queue_search_reply_Base::~CBlast4_queue_search_reply_Base (void)
 
 CBlast4_queue_search_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_queue_search_reply_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_queue_search_reply_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_queue_search_reply_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_queue_search_reply_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_queue_search_reply_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_queue_search_reply_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_queue_search_reply_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
virtual void CBlast4_queue_search_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_queue_search_reply_Base::CBlast4_queue_search_reply_Base (const CBlast4_queue_search_reply_Base &)
 
CBlast4_queue_search_reply_BaseCBlast4_queue_search_reply_Base::operator= (const CBlast4_queue_search_reply_Base &)
 
 CBlast4_queue_search_request::CBlast4_queue_search_request (void)
 
 CBlast4_queue_search_request::~CBlast4_queue_search_request (void)
 
 CBlast4_queue_search_request::CBlast4_queue_search_request (const CBlast4_queue_search_request &value)
 
CBlast4_queue_search_requestCBlast4_queue_search_request::operator= (const CBlast4_queue_search_request &value)
 
 CBlast4_queue_search_request_Base::CBlast4_queue_search_request_Base (void)
 
virtual CBlast4_queue_search_request_Base::~CBlast4_queue_search_request_Base (void)
 
 CBlast4_queue_search_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_queue_search_request_Base::IsSetProgram (void) const
 Check if a value has been assigned to Program data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetProgram (void) const
 Check if it is safe to call GetProgram method. More...
 
void CBlast4_queue_search_request_Base::ResetProgram (void)
 Reset Program data member. More...
 
const TProgramCBlast4_queue_search_request_Base::GetProgram (void) const
 Get the Program member data. More...
 
void CBlast4_queue_search_request_Base::SetProgram (const TProgram &value)
 Assign a value to Program data member. More...
 
void CBlast4_queue_search_request_Base::SetProgram (TProgram &&value)
 
TProgramCBlast4_queue_search_request_Base::SetProgram (void)
 Assign a value to Program data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetService (void) const
 Check if a value has been assigned to Service data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetService (void) const
 Check if it is safe to call GetService method. More...
 
void CBlast4_queue_search_request_Base::ResetService (void)
 Reset Service data member. More...
 
const TServiceCBlast4_queue_search_request_Base::GetService (void) const
 Get the Service member data. More...
 
void CBlast4_queue_search_request_Base::SetService (const TService &value)
 Assign a value to Service data member. More...
 
void CBlast4_queue_search_request_Base::SetService (TService &&value)
 
TServiceCBlast4_queue_search_request_Base::SetService (void)
 Assign a value to Service data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetQueries (void) const
 Check if a value has been assigned to Queries data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetQueries (void) const
 Check if it is safe to call GetQueries method. More...
 
void CBlast4_queue_search_request_Base::ResetQueries (void)
 Reset Queries data member. More...
 
const TQueriesCBlast4_queue_search_request_Base::GetQueries (void) const
 Get the Queries member data. More...
 
void CBlast4_queue_search_request_Base::SetQueries (TQueries &value)
 Assign a value to Queries data member. More...
 
TQueriesCBlast4_queue_search_request_Base::SetQueries (void)
 Assign a value to Queries data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetSubject (void) const
 Check if a value has been assigned to Subject data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetSubject (void) const
 Check if it is safe to call GetSubject method. More...
 
void CBlast4_queue_search_request_Base::ResetSubject (void)
 Reset Subject data member. More...
 
const TSubjectCBlast4_queue_search_request_Base::GetSubject (void) const
 Get the Subject member data. More...
 
void CBlast4_queue_search_request_Base::SetSubject (TSubject &value)
 Assign a value to Subject data member. More...
 
TSubjectCBlast4_queue_search_request_Base::SetSubject (void)
 Assign a value to Subject data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetParamset (void) const
 This field contains a task description Check if a value has been assigned to Paramset data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetParamset (void) const
 Check if it is safe to call GetParamset method. More...
 
void CBlast4_queue_search_request_Base::ResetParamset (void)
 Reset Paramset data member. More...
 
const TParamsetCBlast4_queue_search_request_Base::GetParamset (void) const
 Get the Paramset member data. More...
 
void CBlast4_queue_search_request_Base::SetParamset (const TParamset &value)
 Assign a value to Paramset data member. More...
 
void CBlast4_queue_search_request_Base::SetParamset (TParamset &&value)
 
TParamsetCBlast4_queue_search_request_Base::SetParamset (void)
 Assign a value to Paramset data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetAlgorithm_options (void) const
 Check if a value has been assigned to Algorithm_options data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetAlgorithm_options (void) const
 Check if it is safe to call GetAlgorithm_options method. More...
 
void CBlast4_queue_search_request_Base::ResetAlgorithm_options (void)
 Reset Algorithm_options data member. More...
 
const TAlgorithm_optionsCBlast4_queue_search_request_Base::GetAlgorithm_options (void) const
 Get the Algorithm_options member data. More...
 
void CBlast4_queue_search_request_Base::SetAlgorithm_options (TAlgorithm_options &value)
 Assign a value to Algorithm_options data member. More...
 
TAlgorithm_optionsCBlast4_queue_search_request_Base::SetAlgorithm_options (void)
 Assign a value to Algorithm_options data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetProgram_options (void) const
 Check if a value has been assigned to Program_options data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetProgram_options (void) const
 Check if it is safe to call GetProgram_options method. More...
 
void CBlast4_queue_search_request_Base::ResetProgram_options (void)
 Reset Program_options data member. More...
 
const TProgram_optionsCBlast4_queue_search_request_Base::GetProgram_options (void) const
 Get the Program_options member data. More...
 
void CBlast4_queue_search_request_Base::SetProgram_options (TProgram_options &value)
 Assign a value to Program_options data member. More...
 
TProgram_optionsCBlast4_queue_search_request_Base::SetProgram_options (void)
 Assign a value to Program_options data member. More...
 
bool CBlast4_queue_search_request_Base::IsSetFormat_options (void) const
 Check if a value has been assigned to Format_options data member. More...
 
bool CBlast4_queue_search_request_Base::CanGetFormat_options (void) const
 Check if it is safe to call GetFormat_options method. More...
 
void CBlast4_queue_search_request_Base::ResetFormat_options (void)
 Reset Format_options data member. More...
 
const TFormat_optionsCBlast4_queue_search_request_Base::GetFormat_options (void) const
 Get the Format_options member data. More...
 
void CBlast4_queue_search_request_Base::SetFormat_options (TFormat_options &value)
 Assign a value to Format_options data member. More...
 
TFormat_optionsCBlast4_queue_search_request_Base::SetFormat_options (void)
 Assign a value to Format_options data member. More...
 
virtual void CBlast4_queue_search_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_queue_search_request_Base::CBlast4_queue_search_request_Base (const CBlast4_queue_search_request_Base &)
 
CBlast4_queue_search_request_BaseCBlast4_queue_search_request_Base::operator= (const CBlast4_queue_search_request_Base &)
 
 CBlast4_range_Base::CBlast4_range_Base (void)
 
virtual CBlast4_range_Base::~CBlast4_range_Base (void)
 
 CBlast4_range_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_range_Base::IsSetStart (void) const
 Check if a value has been assigned to Start data member. More...
 
bool CBlast4_range_Base::CanGetStart (void) const
 Check if it is safe to call GetStart method. More...
 
void CBlast4_range_Base::ResetStart (void)
 Reset Start data member. More...
 
TStart CBlast4_range_Base::GetStart (void) const
 Get the Start member data. More...
 
void CBlast4_range_Base::SetStart (TStart value)
 Assign a value to Start data member. More...
 
TStartCBlast4_range_Base::SetStart (void)
 Assign a value to Start data member. More...
 
bool CBlast4_range_Base::IsSetEnd (void) const
 Check if a value has been assigned to End data member. More...
 
bool CBlast4_range_Base::CanGetEnd (void) const
 Check if it is safe to call GetEnd method. More...
 
void CBlast4_range_Base::ResetEnd (void)
 Reset End data member. More...
 
TEnd CBlast4_range_Base::GetEnd (void) const
 Get the End member data. More...
 
void CBlast4_range_Base::SetEnd (TEnd value)
 Assign a value to End data member. More...
 
TEndCBlast4_range_Base::SetEnd (void)
 Assign a value to End data member. More...
 
bool CBlast4_range_Base::IsSetStrand (void) const
 The frame of the range (absent for proteins; -1/1 for nucleotides; -1,-2,-3,1,2,3 for translated sequences) Check if a value has been assigned to Strand data member. More...
 
bool CBlast4_range_Base::CanGetStrand (void) const
 Check if it is safe to call GetStrand method. More...
 
void CBlast4_range_Base::ResetStrand (void)
 Reset Strand data member. More...
 
TStrand CBlast4_range_Base::GetStrand (void) const
 Get the Strand member data. More...
 
void CBlast4_range_Base::SetStrand (TStrand value)
 Assign a value to Strand data member. More...
 
TStrandCBlast4_range_Base::SetStrand (void)
 Assign a value to Strand data member. More...
 
virtual void CBlast4_range_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_range_Base::CBlast4_range_Base (const CBlast4_range_Base &)
 
CBlast4_range_BaseCBlast4_range_Base::operator= (const CBlast4_range_Base &)
 
 CBlast4_reply::CBlast4_reply (void)
 
 CBlast4_reply::~CBlast4_reply (void)
 
 CBlast4_reply::CBlast4_reply (const CBlast4_reply &value)
 
CBlast4_replyCBlast4_reply::operator= (const CBlast4_reply &value)
 
 CBlast4_reply_Base::CBlast4_reply_Base (void)
 
virtual CBlast4_reply_Base::~CBlast4_reply_Base (void)
 
 CBlast4_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_reply_Base::IsSetErrors (void) const
 Check if a value has been assigned to Errors data member. More...
 
bool CBlast4_reply_Base::CanGetErrors (void) const
 Check if it is safe to call GetErrors method. More...
 
void CBlast4_reply_Base::ResetErrors (void)
 Reset Errors data member. More...
 
const TErrorsCBlast4_reply_Base::GetErrors (void) const
 Get the Errors member data. More...
 
TErrorsCBlast4_reply_Base::SetErrors (void)
 Assign a value to Errors data member. More...
 
bool CBlast4_reply_Base::IsSetBody (void) const
 Check if a value has been assigned to Body data member. More...
 
bool CBlast4_reply_Base::CanGetBody (void) const
 Check if it is safe to call GetBody method. More...
 
void CBlast4_reply_Base::ResetBody (void)
 Reset Body data member. More...
 
const TBodyCBlast4_reply_Base::GetBody (void) const
 Get the Body member data. More...
 
void CBlast4_reply_Base::SetBody (TBody &value)
 Assign a value to Body data member. More...
 
TBodyCBlast4_reply_Base::SetBody (void)
 Assign a value to Body data member. More...
 
virtual void CBlast4_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_reply_Base::CBlast4_reply_Base (const CBlast4_reply_Base &)
 
CBlast4_reply_BaseCBlast4_reply_Base::operator= (const CBlast4_reply_Base &)
 
 CBlast4_reply_body::CBlast4_reply_body (void)
 
 CBlast4_reply_body::~CBlast4_reply_body (void)
 
 CBlast4_reply_body::CBlast4_reply_body (const CBlast4_reply_body &value)
 
CBlast4_reply_bodyCBlast4_reply_body::operator= (const CBlast4_reply_body &value)
 
 CBlast4_reply_body_Base::CBlast4_reply_body_Base (void)
 
virtual CBlast4_reply_body_Base::~CBlast4_reply_body_Base (void)
 
 CBlast4_reply_body_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_reply_body_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_reply_body_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_reply_body_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_reply_body_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_reply_body_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_reply_body_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_reply_body_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_reply_body_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_reply_body_Base::IsFinish_params (void) const
 Check if variant Finish_params is selected. More...
 
const TFinish_paramsCBlast4_reply_body_Base::GetFinish_params (void) const
 Get the variant data. More...
 
TFinish_paramsCBlast4_reply_body_Base::SetFinish_params (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetFinish_params (TFinish_params &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_databases (void) const
 Check if variant Get_databases is selected. More...
 
const TGet_databasesCBlast4_reply_body_Base::GetGet_databases (void) const
 Get the variant data. More...
 
TGet_databasesCBlast4_reply_body_Base::SetGet_databases (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_databases (TGet_databases &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_matrices (void) const
 Check if variant Get_matrices is selected. More...
 
const TGet_matricesCBlast4_reply_body_Base::GetGet_matrices (void) const
 Get the variant data. More...
 
TGet_matricesCBlast4_reply_body_Base::SetGet_matrices (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_matrices (TGet_matrices &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_parameters (void) const
 Check if variant Get_parameters is selected. More...
 
const TGet_parametersCBlast4_reply_body_Base::GetGet_parameters (void) const
 Get the variant data. More...
 
TGet_parametersCBlast4_reply_body_Base::SetGet_parameters (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_parameters (TGet_parameters &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_paramsets (void) const
 Check if variant Get_paramsets is selected. More...
 
const TGet_paramsetsCBlast4_reply_body_Base::GetGet_paramsets (void) const
 Get the variant data. More...
 
TGet_paramsetsCBlast4_reply_body_Base::SetGet_paramsets (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_paramsets (TGet_paramsets &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_programs (void) const
 Check if variant Get_programs is selected. More...
 
const TGet_programsCBlast4_reply_body_Base::GetGet_programs (void) const
 Get the variant data. More...
 
TGet_programsCBlast4_reply_body_Base::SetGet_programs (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_programs (TGet_programs &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_search_results (void) const
 Check if variant Get_search_results is selected. More...
 
const TGet_search_resultsCBlast4_reply_body_Base::GetGet_search_results (void) const
 Get the variant data. More...
 
TGet_search_resultsCBlast4_reply_body_Base::SetGet_search_results (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_search_results (TGet_search_results &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_sequences (void) const
 Check if variant Get_sequences is selected. More...
 
const TGet_sequencesCBlast4_reply_body_Base::GetGet_sequences (void) const
 Get the variant data. More...
 
TGet_sequencesCBlast4_reply_body_Base::SetGet_sequences (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_sequences (TGet_sequences &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsQueue_search (void) const
 Check if variant Queue_search is selected. More...
 
const TQueue_searchCBlast4_reply_body_Base::GetQueue_search (void) const
 Get the variant data. More...
 
TQueue_searchCBlast4_reply_body_Base::SetQueue_search (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetQueue_search (TQueue_search &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_queries (void) const
 Check if variant Get_queries is selected. More...
 
const TGet_queriesCBlast4_reply_body_Base::GetGet_queries (void) const
 Get the variant data. More...
 
TGet_queriesCBlast4_reply_body_Base::SetGet_queries (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_queries (TGet_queries &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_request_info (void) const
 Check if variant Get_request_info is selected. More...
 
const TGet_request_infoCBlast4_reply_body_Base::GetGet_request_info (void) const
 Get the variant data. More...
 
TGet_request_infoCBlast4_reply_body_Base::SetGet_request_info (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_request_info (TGet_request_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_sequence_parts (void) const
 Check if variant Get_sequence_parts is selected. More...
 
const TGet_sequence_partsCBlast4_reply_body_Base::GetGet_sequence_parts (void) const
 Get the variant data. More...
 
TGet_sequence_partsCBlast4_reply_body_Base::SetGet_sequence_parts (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_sequence_parts (TGet_sequence_parts &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_windowmasked_taxids (void) const
 Check if variant Get_windowmasked_taxids is selected. More...
 
const TGet_windowmasked_taxidsCBlast4_reply_body_Base::GetGet_windowmasked_taxids (void) const
 Get the variant data. More...
 
TGet_windowmasked_taxidsCBlast4_reply_body_Base::SetGet_windowmasked_taxids (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_windowmasked_taxids (TGet_windowmasked_taxids &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_protocol_info (void) const
 Check if variant Get_protocol_info is selected. More...
 
const TGet_protocol_infoCBlast4_reply_body_Base::GetGet_protocol_info (void) const
 Get the variant data. More...
 
TGet_protocol_infoCBlast4_reply_body_Base::SetGet_protocol_info (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_protocol_info (TGet_protocol_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_search_info (void) const
 Check if variant Get_search_info is selected. More...
 
const TGet_search_infoCBlast4_reply_body_Base::GetGet_search_info (void) const
 Get the variant data. More...
 
TGet_search_infoCBlast4_reply_body_Base::SetGet_search_info (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_search_info (TGet_search_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_reply_body_Base::IsGet_databases_ex (void) const
 Check if variant Get_databases_ex is selected. More...
 
const TGet_databases_exCBlast4_reply_body_Base::GetGet_databases_ex (void) const
 Get the variant data. More...
 
TGet_databases_exCBlast4_reply_body_Base::SetGet_databases_ex (void)
 Select the variant. More...
 
void CBlast4_reply_body_Base::SetGet_databases_ex (TGet_databases_ex &value)
 Select the variant and set its data. More...
 
 CBlast4_reply_body_Base::CBlast4_reply_body_Base (const CBlast4_reply_body_Base &)
 
CBlast4_reply_body_BaseCBlast4_reply_body_Base::operator= (const CBlast4_reply_body_Base &)
 
void CBlast4_reply_body_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_request::CBlast4_request (void)
 
 CBlast4_request::~CBlast4_request (void)
 
 CBlast4_request::CBlast4_request (const CBlast4_request &value)
 
CBlast4_requestCBlast4_request::operator= (const CBlast4_request &value)
 
 CBlast4_request_Base::CBlast4_request_Base (void)
 
virtual CBlast4_request_Base::~CBlast4_request_Base (void)
 
 CBlast4_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_request_Base::IsSetIdent (void) const
 Client identifier (email address, organization name, program/script name, or any other form of contacting the owner of this request) Check if a value has been assigned to Ident data member. More...
 
bool CBlast4_request_Base::CanGetIdent (void) const
 Check if it is safe to call GetIdent method. More...
 
void CBlast4_request_Base::ResetIdent (void)
 Reset Ident data member. More...
 
const TIdentCBlast4_request_Base::GetIdent (void) const
 Get the Ident member data. More...
 
void CBlast4_request_Base::SetIdent (const TIdent &value)
 Assign a value to Ident data member. More...
 
void CBlast4_request_Base::SetIdent (TIdent &&value)
 
TIdentCBlast4_request_Base::SetIdent (void)
 Assign a value to Ident data member. More...
 
bool CBlast4_request_Base::IsSetBody (void) const
 Payload of the request Check if a value has been assigned to Body data member. More...
 
bool CBlast4_request_Base::CanGetBody (void) const
 Check if it is safe to call GetBody method. More...
 
void CBlast4_request_Base::ResetBody (void)
 Reset Body data member. More...
 
const TBodyCBlast4_request_Base::GetBody (void) const
 Get the Body member data. More...
 
void CBlast4_request_Base::SetBody (TBody &value)
 Assign a value to Body data member. More...
 
TBodyCBlast4_request_Base::SetBody (void)
 Assign a value to Body data member. More...
 
virtual void CBlast4_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_request_Base::CBlast4_request_Base (const CBlast4_request_Base &)
 
CBlast4_request_BaseCBlast4_request_Base::operator= (const CBlast4_request_Base &)
 
 CBlast4_request_body::CBlast4_request_body (void)
 
 CBlast4_request_body::~CBlast4_request_body (void)
 
 CBlast4_request_body::CBlast4_request_body (const CBlast4_request_body &value)
 
CBlast4_request_bodyCBlast4_request_body::operator= (const CBlast4_request_body &value)
 
 CBlast4_request_body_Base::CBlast4_request_body_Base (void)
 
virtual CBlast4_request_body_Base::~CBlast4_request_body_Base (void)
 
 CBlast4_request_body_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_request_body_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_request_body_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_request_body_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_request_body_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_request_body_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_request_body_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_request_body_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_request_body_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_request_body_Base::IsFinish_params (void) const
 Check if variant Finish_params is selected. More...
 
const TFinish_paramsCBlast4_request_body_Base::GetFinish_params (void) const
 Get the variant data. More...
 
TFinish_paramsCBlast4_request_body_Base::SetFinish_params (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetFinish_params (TFinish_params &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_databases (void) const
 Check if variant Get_databases is selected. More...
 
void CBlast4_request_body_Base::SetGet_databases (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_matrices (void) const
 Check if variant Get_matrices is selected. More...
 
void CBlast4_request_body_Base::SetGet_matrices (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_parameters (void) const
 Check if variant Get_parameters is selected. More...
 
void CBlast4_request_body_Base::SetGet_parameters (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_paramsets (void) const
 Check if variant Get_paramsets is selected. More...
 
void CBlast4_request_body_Base::SetGet_paramsets (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_programs (void) const
 Check if variant Get_programs is selected. More...
 
void CBlast4_request_body_Base::SetGet_programs (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_search_results (void) const
 Check if variant Get_search_results is selected. More...
 
const TGet_search_resultsCBlast4_request_body_Base::GetGet_search_results (void) const
 Get the variant data. More...
 
TGet_search_resultsCBlast4_request_body_Base::SetGet_search_results (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_search_results (TGet_search_results &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_sequences (void) const
 Check if variant Get_sequences is selected. More...
 
const TGet_sequencesCBlast4_request_body_Base::GetGet_sequences (void) const
 Get the variant data. More...
 
TGet_sequencesCBlast4_request_body_Base::SetGet_sequences (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_sequences (TGet_sequences &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsQueue_search (void) const
 Check if variant Queue_search is selected. More...
 
const TQueue_searchCBlast4_request_body_Base::GetQueue_search (void) const
 Get the variant data. More...
 
TQueue_searchCBlast4_request_body_Base::SetQueue_search (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetQueue_search (TQueue_search &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_request_info (void) const
 Check if variant Get_request_info is selected. More...
 
const TGet_request_infoCBlast4_request_body_Base::GetGet_request_info (void) const
 Get the variant data. More...
 
TGet_request_infoCBlast4_request_body_Base::SetGet_request_info (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_request_info (TGet_request_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_sequence_parts (void) const
 Check if variant Get_sequence_parts is selected. More...
 
const TGet_sequence_partsCBlast4_request_body_Base::GetGet_sequence_parts (void) const
 Get the variant data. More...
 
TGet_sequence_partsCBlast4_request_body_Base::SetGet_sequence_parts (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_sequence_parts (TGet_sequence_parts &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_windowmasked_taxids (void) const
 Check if variant Get_windowmasked_taxids is selected. More...
 
void CBlast4_request_body_Base::SetGet_windowmasked_taxids (void)
 Select the variant. More...
 
bool CBlast4_request_body_Base::IsGet_protocol_info (void) const
 Check if variant Get_protocol_info is selected. More...
 
const TGet_protocol_infoCBlast4_request_body_Base::GetGet_protocol_info (void) const
 Get the variant data. More...
 
TGet_protocol_infoCBlast4_request_body_Base::SetGet_protocol_info (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_protocol_info (TGet_protocol_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_search_info (void) const
 Check if variant Get_search_info is selected. More...
 
const TGet_search_infoCBlast4_request_body_Base::GetGet_search_info (void) const
 Get the variant data. More...
 
TGet_search_infoCBlast4_request_body_Base::SetGet_search_info (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_search_info (TGet_search_info &value)
 Select the variant and set its data. More...
 
bool CBlast4_request_body_Base::IsGet_databases_ex (void) const
 Check if variant Get_databases_ex is selected. More...
 
const TGet_databases_exCBlast4_request_body_Base::GetGet_databases_ex (void) const
 Get the variant data. More...
 
TGet_databases_exCBlast4_request_body_Base::SetGet_databases_ex (void)
 Select the variant. More...
 
void CBlast4_request_body_Base::SetGet_databases_ex (TGet_databases_ex &value)
 Select the variant and set its data. More...
 
 CBlast4_request_body_Base::CBlast4_request_body_Base (const CBlast4_request_body_Base &)
 
CBlast4_request_body_BaseCBlast4_request_body_Base::operator= (const CBlast4_request_body_Base &)
 
void CBlast4_request_body_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_seq_part_data::CBlast4_seq_part_data (void)
 
 CBlast4_seq_part_data::~CBlast4_seq_part_data (void)
 
 CBlast4_seq_part_data::CBlast4_seq_part_data (const CBlast4_seq_part_data &value)
 
CBlast4_seq_part_dataCBlast4_seq_part_data::operator= (const CBlast4_seq_part_data &value)
 
 CBlast4_seq_part_data_Base::CBlast4_seq_part_data_Base (void)
 
virtual CBlast4_seq_part_data_Base::~CBlast4_seq_part_data_Base (void)
 
 CBlast4_seq_part_data_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_seq_part_data_Base::IsSetId (void) const
 Sequence identifier Check if a value has been assigned to Id data member. More...
 
bool CBlast4_seq_part_data_Base::CanGetId (void) const
 Check if it is safe to call GetId method. More...
 
void CBlast4_seq_part_data_Base::ResetId (void)
 Reset Id data member. More...
 
const TIdCBlast4_seq_part_data_Base::GetId (void) const
 Get the Id member data. More...
 
void CBlast4_seq_part_data_Base::SetId (TId &value)
 Assign a value to Id data member. More...
 
TIdCBlast4_seq_part_data_Base::SetId (void)
 Assign a value to Id data member. More...
 
bool CBlast4_seq_part_data_Base::IsSetData (void) const
 Its sequence data (may be partial) Check if a value has been assigned to Data data member. More...
 
bool CBlast4_seq_part_data_Base::CanGetData (void) const
 Check if it is safe to call GetData method. More...
 
void CBlast4_seq_part_data_Base::ResetData (void)
 Reset Data data member. More...
 
const TDataCBlast4_seq_part_data_Base::GetData (void) const
 Get the Data member data. More...
 
void CBlast4_seq_part_data_Base::SetData (TData &value)
 Assign a value to Data data member. More...
 
TDataCBlast4_seq_part_data_Base::SetData (void)
 Assign a value to Data data member. More...
 
virtual void CBlast4_seq_part_data_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_seq_part_data_Base::CBlast4_seq_part_data_Base (const CBlast4_seq_part_data_Base &)
 
CBlast4_seq_part_data_BaseCBlast4_seq_part_data_Base::operator= (const CBlast4_seq_part_data_Base &)
 
 CBlast4_simple_alignment::CBlast4_simple_alignment (void)
 
 CBlast4_simple_alignment::~CBlast4_simple_alignment (void)
 
 CBlast4_simple_alignment::CBlast4_simple_alignment (const CBlast4_simple_alignment &value)
 
CBlast4_simple_alignmentCBlast4_simple_alignment::operator= (const CBlast4_simple_alignment &value)
 
 CBlast4_simple_alignment_Base::CBlast4_simple_alignment_Base (void)
 
virtual CBlast4_simple_alignment_Base::~CBlast4_simple_alignment_Base (void)
 
 CBlast4_simple_alignment_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_simple_alignment_Base::IsSetSubject_id (void) const
 Subject sequence identifier (normally a GI from the SeqAlign) Check if a value has been assigned to Subject_id data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetSubject_id (void) const
 Check if it is safe to call GetSubject_id method. More...
 
void CBlast4_simple_alignment_Base::ResetSubject_id (void)
 Reset Subject_id data member. More...
 
const TSubject_idCBlast4_simple_alignment_Base::GetSubject_id (void) const
 Get the Subject_id member data. More...
 
void CBlast4_simple_alignment_Base::SetSubject_id (const TSubject_id &value)
 Assign a value to Subject_id data member. More...
 
void CBlast4_simple_alignment_Base::SetSubject_id (TSubject_id &&value)
 
TSubject_idCBlast4_simple_alignment_Base::SetSubject_id (void)
 Assign a value to Subject_id data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetE_value (void) const
 E-Value Check if a value has been assigned to E_value data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetE_value (void) const
 Check if it is safe to call GetE_value method. More...
 
void CBlast4_simple_alignment_Base::ResetE_value (void)
 Reset E_value data member. More...
 
TE_value CBlast4_simple_alignment_Base::GetE_value (void) const
 Get the E_value member data. More...
 
void CBlast4_simple_alignment_Base::SetE_value (TE_value value)
 Assign a value to E_value data member. More...
 
TE_valueCBlast4_simple_alignment_Base::SetE_value (void)
 Assign a value to E_value data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetBit_score (void) const
 Bit score Check if a value has been assigned to Bit_score data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetBit_score (void) const
 Check if it is safe to call GetBit_score method. More...
 
void CBlast4_simple_alignment_Base::ResetBit_score (void)
 Reset Bit_score data member. More...
 
TBit_score CBlast4_simple_alignment_Base::GetBit_score (void) const
 Get the Bit_score member data. More...
 
void CBlast4_simple_alignment_Base::SetBit_score (TBit_score value)
 Assign a value to Bit_score data member. More...
 
TBit_scoreCBlast4_simple_alignment_Base::SetBit_score (void)
 Assign a value to Bit_score data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetNum_identities (void) const
 Number of identities Check if a value has been assigned to Num_identities data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetNum_identities (void) const
 Check if it is safe to call GetNum_identities method. More...
 
void CBlast4_simple_alignment_Base::ResetNum_identities (void)
 Reset Num_identities data member. More...
 
TNum_identities CBlast4_simple_alignment_Base::GetNum_identities (void) const
 Get the Num_identities member data. More...
 
void CBlast4_simple_alignment_Base::SetNum_identities (TNum_identities value)
 Assign a value to Num_identities data member. More...
 
TNum_identitiesCBlast4_simple_alignment_Base::SetNum_identities (void)
 Assign a value to Num_identities data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetNum_indels (void) const
 Number of insertions/deletions Check if a value has been assigned to Num_indels data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetNum_indels (void) const
 Check if it is safe to call GetNum_indels method. More...
 
void CBlast4_simple_alignment_Base::ResetNum_indels (void)
 Reset Num_indels data member. More...
 
TNum_indels CBlast4_simple_alignment_Base::GetNum_indels (void) const
 Get the Num_indels member data. More...
 
void CBlast4_simple_alignment_Base::SetNum_indels (TNum_indels value)
 Assign a value to Num_indels data member. More...
 
TNum_indelsCBlast4_simple_alignment_Base::SetNum_indels (void)
 Assign a value to Num_indels data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetFull_query_range (void) const
 Full query range covered by this HSP Check if a value has been assigned to Full_query_range data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetFull_query_range (void) const
 Check if it is safe to call GetFull_query_range method. More...
 
void CBlast4_simple_alignment_Base::ResetFull_query_range (void)
 Reset Full_query_range data member. More...
 
const TFull_query_rangeCBlast4_simple_alignment_Base::GetFull_query_range (void) const
 Get the Full_query_range member data. More...
 
void CBlast4_simple_alignment_Base::SetFull_query_range (TFull_query_range &value)
 Assign a value to Full_query_range data member. More...
 
TFull_query_rangeCBlast4_simple_alignment_Base::SetFull_query_range (void)
 Assign a value to Full_query_range data member. More...
 
bool CBlast4_simple_alignment_Base::IsSetFull_subject_range (void) const
 Full subject range covered by this HSP Check if a value has been assigned to Full_subject_range data member. More...
 
bool CBlast4_simple_alignment_Base::CanGetFull_subject_range (void) const
 Check if it is safe to call GetFull_subject_range method. More...
 
void CBlast4_simple_alignment_Base::ResetFull_subject_range (void)
 Reset Full_subject_range data member. More...
 
const TFull_subject_rangeCBlast4_simple_alignment_Base::GetFull_subject_range (void) const
 Get the Full_subject_range member data. More...
 
void CBlast4_simple_alignment_Base::SetFull_subject_range (TFull_subject_range &value)
 Assign a value to Full_subject_range data member. More...
 
TFull_subject_rangeCBlast4_simple_alignment_Base::SetFull_subject_range (void)
 Assign a value to Full_subject_range data member. More...
 
virtual void CBlast4_simple_alignment_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_simple_alignment_Base::CBlast4_simple_alignment_Base (const CBlast4_simple_alignment_Base &)
 
CBlast4_simple_alignment_BaseCBlast4_simple_alignment_Base::operator= (const CBlast4_simple_alignment_Base &)
 
 CBlast4_simple_results::CBlast4_simple_results (void)
 
 CBlast4_simple_results::~CBlast4_simple_results (void)
 
 CBlast4_simple_results::CBlast4_simple_results (const CBlast4_simple_results &value)
 
CBlast4_simple_resultsCBlast4_simple_results::operator= (const CBlast4_simple_results &value)
 
 CBlast4_simple_results_Base::CBlast4_simple_results_Base (void)
 
virtual CBlast4_simple_results_Base::~CBlast4_simple_results_Base (void)
 
 CBlast4_simple_results_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_simple_results_Base::IsSetAll_alignments (void) const
 Check if a value has been assigned to All_alignments data member. More...
 
bool CBlast4_simple_results_Base::CanGetAll_alignments (void) const
 Check if it is safe to call GetAll_alignments method. More...
 
void CBlast4_simple_results_Base::ResetAll_alignments (void)
 Reset All_alignments data member. More...
 
const TAll_alignmentsCBlast4_simple_results_Base::GetAll_alignments (void) const
 Get the All_alignments member data. More...
 
TAll_alignmentsCBlast4_simple_results_Base::SetAll_alignments (void)
 Assign a value to All_alignments data member. More...
 
virtual void CBlast4_simple_results_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_simple_results_Base::CBlast4_simple_results_Base (const CBlast4_simple_results_Base &)
 
CBlast4_simple_results_BaseCBlast4_simple_results_Base::operator= (const CBlast4_simple_results_Base &)
 
 CBlast4_subject::CBlast4_subject (void)
 
 CBlast4_subject::~CBlast4_subject (void)
 
 CBlast4_subject::CBlast4_subject (const CBlast4_subject &value)
 
CBlast4_subjectCBlast4_subject::operator= (const CBlast4_subject &value)
 
 CBlast4_subject_Base::CBlast4_subject_Base (void)
 
virtual CBlast4_subject_Base::~CBlast4_subject_Base (void)
 
 CBlast4_subject_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_subject_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_subject_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_subject_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_subject_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_subject_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_subject_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_subject_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_subject_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_subject_Base::IsDatabase (void) const
 Check if variant Database is selected. More...
 
const TDatabaseCBlast4_subject_Base::GetDatabase (void) const
 Get the variant data. More...
 
TDatabaseCBlast4_subject_Base::SetDatabase (void)
 Select the variant. More...
 
void CBlast4_subject_Base::SetDatabase (const TDatabase &value)
 Select the variant and set its data. More...
 
bool CBlast4_subject_Base::IsSequences (void) const
 Check if variant Sequences is selected. More...
 
const TSequencesCBlast4_subject_Base::GetSequences (void) const
 Get the variant data. More...
 
TSequencesCBlast4_subject_Base::SetSequences (void)
 Select the variant. More...
 
bool CBlast4_subject_Base::IsSeq_loc_list (void) const
 Check if variant Seq_loc_list is selected. More...
 
const TSeq_loc_listCBlast4_subject_Base::GetSeq_loc_list (void) const
 Get the variant data. More...
 
TSeq_loc_listCBlast4_subject_Base::SetSeq_loc_list (void)
 Select the variant. More...
 
 CBlast4_subject_Base::CBlast4_subject_Base (const CBlast4_subject_Base &)
 
CBlast4_subject_BaseCBlast4_subject_Base::operator= (const CBlast4_subject_Base &)
 
void CBlast4_subject_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_task_info::CBlast4_task_info (void)
 
 CBlast4_task_info::~CBlast4_task_info (void)
 
 CBlast4_task_info::CBlast4_task_info (const CBlast4_task_info &value)
 
CBlast4_task_infoCBlast4_task_info::operator= (const CBlast4_task_info &value)
 
 CBlast4_task_info_Base::CBlast4_task_info_Base (void)
 
virtual CBlast4_task_info_Base::~CBlast4_task_info_Base (void)
 
 CBlast4_task_info_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_task_info_Base::IsSetName (void) const
 Name of this task Check if a value has been assigned to Name data member. More...
 
bool CBlast4_task_info_Base::CanGetName (void) const
 Check if it is safe to call GetName method. More...
 
void CBlast4_task_info_Base::ResetName (void)
 Reset Name data member. More...
 
const TNameCBlast4_task_info_Base::GetName (void) const
 Get the Name member data. More...
 
void CBlast4_task_info_Base::SetName (const TName &value)
 Assign a value to Name data member. More...
 
void CBlast4_task_info_Base::SetName (TName &&value)
 
TNameCBlast4_task_info_Base::SetName (void)
 Assign a value to Name data member. More...
 
bool CBlast4_task_info_Base::IsSetDocumentation (void) const
 Description of the task Check if a value has been assigned to Documentation data member. More...
 
bool CBlast4_task_info_Base::CanGetDocumentation (void) const
 Check if it is safe to call GetDocumentation method. More...
 
void CBlast4_task_info_Base::ResetDocumentation (void)
 Reset Documentation data member. More...
 
const TDocumentationCBlast4_task_info_Base::GetDocumentation (void) const
 Get the Documentation member data. More...
 
void CBlast4_task_info_Base::SetDocumentation (const TDocumentation &value)
 Assign a value to Documentation data member. More...
 
void CBlast4_task_info_Base::SetDocumentation (TDocumentation &&value)
 
TDocumentationCBlast4_task_info_Base::SetDocumentation (void)
 Assign a value to Documentation data member. More...
 
virtual void CBlast4_task_info_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_task_info_Base::CBlast4_task_info_Base (const CBlast4_task_info_Base &)
 
CBlast4_task_info_BaseCBlast4_task_info_Base::operator= (const CBlast4_task_info_Base &)
 
 CBlast4_value::CBlast4_value (void)
 
 CBlast4_value::~CBlast4_value (void)
 
 CBlast4_value::CBlast4_value (const CBlast4_value &value)
 
CBlast4_valueCBlast4_value::operator= (const CBlast4_value &value)
 
 CBlast4_value_Base::CBlast4_value_Base (void)
 
virtual CBlast4_value_Base::~CBlast4_value_Base (void)
 
 CBlast4_value_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
virtual void CBlast4_value_Base::Reset (void)
 Reset the whole object. More...
 
virtual void CBlast4_value_Base::ResetSelection (void)
 Reset the selection (set it to e_not_set). More...
 
E_Choice CBlast4_value_Base::Which (void) const
 Which variant is currently selected. More...
 
void CBlast4_value_Base::CheckSelected (E_Choice index) const
 Verify selection, throw exception if it differs from the expected. More...
 
void CBlast4_value_Base::ThrowInvalidSelection (E_Choice index) const
 Throw 'InvalidSelection' exception. More...
 
static string CBlast4_value_Base::SelectionName (E_Choice index)
 Retrieve selection name (for diagnostic purposes). More...
 
void CBlast4_value_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
 Select the requested variant if needed. More...
 
void CBlast4_value_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
 Select the requested variant if needed, allocating CObject variants from memory pool. More...
 
bool CBlast4_value_Base::IsBig_integer (void) const
 Check if variant Big_integer is selected. More...
 
TBig_integer CBlast4_value_Base::GetBig_integer (void) const
 Get the variant data. More...
 
TBig_integerCBlast4_value_Base::SetBig_integer (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetBig_integer (TBig_integer value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsBioseq (void) const
 Check if variant Bioseq is selected. More...
 
const TBioseqCBlast4_value_Base::GetBioseq (void) const
 Get the variant data. More...
 
TBioseqCBlast4_value_Base::SetBioseq (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetBioseq (TBioseq &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsBoolean (void) const
 Check if variant Boolean is selected. More...
 
TBoolean CBlast4_value_Base::GetBoolean (void) const
 Get the variant data. More...
 
TBooleanCBlast4_value_Base::SetBoolean (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetBoolean (TBoolean value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsCutoff (void) const
 Check if variant Cutoff is selected. More...
 
const TCutoffCBlast4_value_Base::GetCutoff (void) const
 Get the variant data. More...
 
TCutoffCBlast4_value_Base::SetCutoff (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetCutoff (TCutoff &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsInteger (void) const
 Check if variant Integer is selected. More...
 
TInteger CBlast4_value_Base::GetInteger (void) const
 Get the variant data. More...
 
TIntegerCBlast4_value_Base::SetInteger (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetInteger (TInteger value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsMatrix (void) const
 Check if variant Matrix is selected. More...
 
const TMatrixCBlast4_value_Base::GetMatrix (void) const
 Get the variant data. More...
 
TMatrixCBlast4_value_Base::SetMatrix (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetMatrix (TMatrix &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsReal (void) const
 Check if variant Real is selected. More...
 
TReal CBlast4_value_Base::GetReal (void) const
 Get the variant data. More...
 
TRealCBlast4_value_Base::SetReal (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetReal (TReal value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsSeq_align (void) const
 Check if variant Seq_align is selected. More...
 
const TSeq_alignCBlast4_value_Base::GetSeq_align (void) const
 Get the variant data. More...
 
TSeq_alignCBlast4_value_Base::SetSeq_align (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetSeq_align (TSeq_align &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsSeq_id (void) const
 Check if variant Seq_id is selected. More...
 
const TSeq_idCBlast4_value_Base::GetSeq_id (void) const
 Get the variant data. More...
 
TSeq_idCBlast4_value_Base::SetSeq_id (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetSeq_id (TSeq_id &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsSeq_loc (void) const
 Check if variant Seq_loc is selected. More...
 
const TSeq_locCBlast4_value_Base::GetSeq_loc (void) const
 Get the variant data. More...
 
TSeq_locCBlast4_value_Base::SetSeq_loc (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetSeq_loc (TSeq_loc &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsStrand_type (void) const
 Check if variant Strand_type is selected. More...
 
TStrand_type CBlast4_value_Base::GetStrand_type (void) const
 Get the variant data. More...
 
TStrand_typeCBlast4_value_Base::SetStrand_type (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetStrand_type (TStrand_type value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsString (void) const
 Check if variant String is selected. More...
 
const TStringCBlast4_value_Base::GetString (void) const
 Get the variant data. More...
 
TStringCBlast4_value_Base::SetString (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetString (const TString &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsBig_integer_list (void) const
 Check if variant Big_integer_list is selected. More...
 
const TBig_integer_listCBlast4_value_Base::GetBig_integer_list (void) const
 Get the variant data. More...
 
TBig_integer_listCBlast4_value_Base::SetBig_integer_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsBioseq_list (void) const
 Check if variant Bioseq_list is selected. More...
 
const TBioseq_listCBlast4_value_Base::GetBioseq_list (void) const
 Get the variant data. More...
 
TBioseq_listCBlast4_value_Base::SetBioseq_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsBoolean_list (void) const
 Check if variant Boolean_list is selected. More...
 
const TBoolean_listCBlast4_value_Base::GetBoolean_list (void) const
 Get the variant data. More...
 
TBoolean_listCBlast4_value_Base::SetBoolean_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsCutoff_list (void) const
 Check if variant Cutoff_list is selected. More...
 
const TCutoff_listCBlast4_value_Base::GetCutoff_list (void) const
 Get the variant data. More...
 
TCutoff_listCBlast4_value_Base::SetCutoff_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsInteger_list (void) const
 Check if variant Integer_list is selected. More...
 
const TInteger_listCBlast4_value_Base::GetInteger_list (void) const
 Get the variant data. More...
 
TInteger_listCBlast4_value_Base::SetInteger_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsMatrix_list (void) const
 Check if variant Matrix_list is selected. More...
 
const TMatrix_listCBlast4_value_Base::GetMatrix_list (void) const
 Get the variant data. More...
 
TMatrix_listCBlast4_value_Base::SetMatrix_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsReal_list (void) const
 Check if variant Real_list is selected. More...
 
const TReal_listCBlast4_value_Base::GetReal_list (void) const
 Get the variant data. More...
 
TReal_listCBlast4_value_Base::SetReal_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsSeq_align_list (void) const
 Check if variant Seq_align_list is selected. More...
 
const TSeq_align_listCBlast4_value_Base::GetSeq_align_list (void) const
 Get the variant data. More...
 
TSeq_align_listCBlast4_value_Base::SetSeq_align_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsSeq_id_list (void) const
 Check if variant Seq_id_list is selected. More...
 
const TSeq_id_listCBlast4_value_Base::GetSeq_id_list (void) const
 Get the variant data. More...
 
TSeq_id_listCBlast4_value_Base::SetSeq_id_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsSeq_loc_list (void) const
 Check if variant Seq_loc_list is selected. More...
 
const TSeq_loc_listCBlast4_value_Base::GetSeq_loc_list (void) const
 Get the variant data. More...
 
TSeq_loc_listCBlast4_value_Base::SetSeq_loc_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsStrand_type_list (void) const
 Check if variant Strand_type_list is selected. More...
 
const TStrand_type_listCBlast4_value_Base::GetStrand_type_list (void) const
 Get the variant data. More...
 
TStrand_type_listCBlast4_value_Base::SetStrand_type_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsString_list (void) const
 Check if variant String_list is selected. More...
 
const TString_listCBlast4_value_Base::GetString_list (void) const
 Get the variant data. More...
 
TString_listCBlast4_value_Base::SetString_list (void)
 Select the variant. More...
 
bool CBlast4_value_Base::IsBioseq_set (void) const
 Check if variant Bioseq_set is selected. More...
 
const TBioseq_setCBlast4_value_Base::GetBioseq_set (void) const
 Get the variant data. More...
 
TBioseq_setCBlast4_value_Base::SetBioseq_set (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetBioseq_set (TBioseq_set &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsSeq_align_set (void) const
 Check if variant Seq_align_set is selected. More...
 
const TSeq_align_setCBlast4_value_Base::GetSeq_align_set (void) const
 Get the variant data. More...
 
TSeq_align_setCBlast4_value_Base::SetSeq_align_set (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetSeq_align_set (TSeq_align_set &value)
 Select the variant and set its data. More...
 
bool CBlast4_value_Base::IsQuery_mask (void) const
 Check if variant Query_mask is selected. More...
 
const TQuery_maskCBlast4_value_Base::GetQuery_mask (void) const
 Get the variant data. More...
 
TQuery_maskCBlast4_value_Base::SetQuery_mask (void)
 Select the variant. More...
 
void CBlast4_value_Base::SetQuery_mask (TQuery_mask &value)
 Select the variant and set its data. More...
 
 CBlast4_value_Base::CBlast4_value_Base (const CBlast4_value_Base &)
 
CBlast4_value_BaseCBlast4_value_Base::operator= (const CBlast4_value_Base &)
 
void CBlast4_value_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
 
 CBlast4_finish_params_request::CBlast4_finish_params_request (void)
 
 CBlast4_finish_params_request::~CBlast4_finish_params_request (void)
 
 CBlast4_finish_params_request::CBlast4_finish_params_request (const CBlast4_finish_params_request &value)
 
CBlast4_finish_params_requestCBlast4_finish_params_request::operator= (const CBlast4_finish_params_request &value)
 
 CBlast4_finish_params_request_Base::CBlast4_finish_params_request_Base (void)
 
virtual CBlast4_finish_params_request_Base::~CBlast4_finish_params_request_Base (void)
 
 CBlast4_finish_params_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_finish_params_request_Base::IsSetProgram (void) const
 Check if a value has been assigned to Program data member. More...
 
bool CBlast4_finish_params_request_Base::CanGetProgram (void) const
 Check if it is safe to call GetProgram method. More...
 
void CBlast4_finish_params_request_Base::ResetProgram (void)
 Reset Program data member. More...
 
const TProgramCBlast4_finish_params_request_Base::GetProgram (void) const
 Get the Program member data. More...
 
void CBlast4_finish_params_request_Base::SetProgram (const TProgram &value)
 Assign a value to Program data member. More...
 
void CBlast4_finish_params_request_Base::SetProgram (TProgram &&value)
 
TProgramCBlast4_finish_params_request_Base::SetProgram (void)
 Assign a value to Program data member. More...
 
bool CBlast4_finish_params_request_Base::IsSetService (void) const
 Check if a value has been assigned to Service data member. More...
 
bool CBlast4_finish_params_request_Base::CanGetService (void) const
 Check if it is safe to call GetService method. More...
 
void CBlast4_finish_params_request_Base::ResetService (void)
 Reset Service data member. More...
 
const TServiceCBlast4_finish_params_request_Base::GetService (void) const
 Get the Service member data. More...
 
void CBlast4_finish_params_request_Base::SetService (const TService &value)
 Assign a value to Service data member. More...
 
void CBlast4_finish_params_request_Base::SetService (TService &&value)
 
TServiceCBlast4_finish_params_request_Base::SetService (void)
 Assign a value to Service data member. More...
 
bool CBlast4_finish_params_request_Base::IsSetParamset (void) const
 Check if a value has been assigned to Paramset data member. More...
 
bool CBlast4_finish_params_request_Base::CanGetParamset (void) const
 Check if it is safe to call GetParamset method. More...
 
void CBlast4_finish_params_request_Base::ResetParamset (void)
 Reset Paramset data member. More...
 
const TParamsetCBlast4_finish_params_request_Base::GetParamset (void) const
 Get the Paramset member data. More...
 
void CBlast4_finish_params_request_Base::SetParamset (const TParamset &value)
 Assign a value to Paramset data member. More...
 
void CBlast4_finish_params_request_Base::SetParamset (TParamset &&value)
 
TParamsetCBlast4_finish_params_request_Base::SetParamset (void)
 Assign a value to Paramset data member. More...
 
bool CBlast4_finish_params_request_Base::IsSetParams (void) const
 Check if a value has been assigned to Params data member. More...
 
bool CBlast4_finish_params_request_Base::CanGetParams (void) const
 Check if it is safe to call GetParams method. More...
 
void CBlast4_finish_params_request_Base::ResetParams (void)
 Reset Params data member. More...
 
const TParamsCBlast4_finish_params_request_Base::GetParams (void) const
 Get the Params member data. More...
 
void CBlast4_finish_params_request_Base::SetParams (TParams &value)
 Assign a value to Params data member. More...
 
TParamsCBlast4_finish_params_request_Base::SetParams (void)
 Assign a value to Params data member. More...
 
virtual void CBlast4_finish_params_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_finish_params_request_Base::CBlast4_finish_params_request_Base (const CBlast4_finish_params_request_Base &)
 
CBlast4_finish_params_request_BaseCBlast4_finish_params_request_Base::operator= (const CBlast4_finish_params_request_Base &)
 
 CBlast4_get_databases_ex_request::CBlast4_get_databases_ex_request (void)
 
 CBlast4_get_databases_ex_request::~CBlast4_get_databases_ex_request (void)
 
 CBlast4_get_databases_ex_request::CBlast4_get_databases_ex_request (const CBlast4_get_databases_ex_request &value)
 
CBlast4_get_databases_ex_requestCBlast4_get_databases_ex_request::operator= (const CBlast4_get_databases_ex_request &value)
 
 CBlast4_get_databases_ex_request_Base::CBlast4_get_databases_ex_request_Base (void)
 
virtual CBlast4_get_databases_ex_request_Base::~CBlast4_get_databases_ex_request_Base (void)
 
 CBlast4_get_databases_ex_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_databases_ex_request_Base::IsSetParams (void) const
 Check if a value has been assigned to Params data member. More...
 
bool CBlast4_get_databases_ex_request_Base::CanGetParams (void) const
 Check if it is safe to call GetParams method. More...
 
void CBlast4_get_databases_ex_request_Base::ResetParams (void)
 Reset Params data member. More...
 
const TParamsCBlast4_get_databases_ex_request_Base::GetParams (void) const
 Get the Params member data. More...
 
void CBlast4_get_databases_ex_request_Base::SetParams (TParams &value)
 Assign a value to Params data member. More...
 
TParamsCBlast4_get_databases_ex_request_Base::SetParams (void)
 Assign a value to Params data member. More...
 
virtual void CBlast4_get_databases_ex_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_databases_ex_request_Base::CBlast4_get_databases_ex_request_Base (const CBlast4_get_databases_ex_request_Base &)
 
CBlast4_get_databases_ex_request_BaseCBlast4_get_databases_ex_request_Base::operator= (const CBlast4_get_databases_ex_request_Base &)
 
 CBlast4_get_protocol_info_reply::CBlast4_get_protocol_info_reply (void)
 
 CBlast4_get_protocol_info_reply_Base::CBlast4_get_protocol_info_reply_Base (void)
 
 CBlast4_get_protocol_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
const CBlast4_parametersCBlast4_get_protocol_info_reply_Base::Get (void) const
 
CBlast4_parametersCBlast4_get_protocol_info_reply_Base::Set (void)
 
 CBlast4_get_protocol_info_request::CBlast4_get_protocol_info_request (void)
 
 CBlast4_get_protocol_info_request_Base::CBlast4_get_protocol_info_request_Base (void)
 
 CBlast4_get_protocol_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
const CBlast4_parametersCBlast4_get_protocol_info_request_Base::Get (void) const
 
CBlast4_parametersCBlast4_get_protocol_info_request_Base::Set (void)
 
 CBlast4_get_request_info_reply::CBlast4_get_request_info_reply (void)
 
 CBlast4_get_request_info_reply::~CBlast4_get_request_info_reply (void)
 
 CBlast4_get_request_info_reply::CBlast4_get_request_info_reply (const CBlast4_get_request_info_reply &value)
 
CBlast4_get_request_info_replyCBlast4_get_request_info_reply::operator= (const CBlast4_get_request_info_reply &value)
 
 CBlast4_get_request_info_reply_Base::CBlast4_get_request_info_reply_Base (void)
 
virtual CBlast4_get_request_info_reply_Base::~CBlast4_get_request_info_reply_Base (void)
 
 CBlast4_get_request_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_request_info_reply_Base::IsSetDatabase (void) const
 Check if a value has been assigned to Database data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetDatabase (void) const
 Check if it is safe to call GetDatabase method. More...
 
void CBlast4_get_request_info_reply_Base::ResetDatabase (void)
 Reset Database data member. More...
 
const TDatabaseCBlast4_get_request_info_reply_Base::GetDatabase (void) const
 Get the Database member data. More...
 
void CBlast4_get_request_info_reply_Base::SetDatabase (TDatabase &value)
 Assign a value to Database data member. More...
 
TDatabaseCBlast4_get_request_info_reply_Base::SetDatabase (void)
 Assign a value to Database data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetProgram (void) const
 Check if a value has been assigned to Program data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetProgram (void) const
 Check if it is safe to call GetProgram method. More...
 
void CBlast4_get_request_info_reply_Base::ResetProgram (void)
 Reset Program data member. More...
 
const TProgramCBlast4_get_request_info_reply_Base::GetProgram (void) const
 Get the Program member data. More...
 
void CBlast4_get_request_info_reply_Base::SetProgram (const TProgram &value)
 Assign a value to Program data member. More...
 
void CBlast4_get_request_info_reply_Base::SetProgram (TProgram &&value)
 
TProgramCBlast4_get_request_info_reply_Base::SetProgram (void)
 Assign a value to Program data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetService (void) const
 Check if a value has been assigned to Service data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetService (void) const
 Check if it is safe to call GetService method. More...
 
void CBlast4_get_request_info_reply_Base::ResetService (void)
 Reset Service data member. More...
 
const TServiceCBlast4_get_request_info_reply_Base::GetService (void) const
 Get the Service member data. More...
 
void CBlast4_get_request_info_reply_Base::SetService (const TService &value)
 Assign a value to Service data member. More...
 
void CBlast4_get_request_info_reply_Base::SetService (TService &&value)
 
TServiceCBlast4_get_request_info_reply_Base::SetService (void)
 Assign a value to Service data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetCreated_by (void) const
 Check if a value has been assigned to Created_by data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetCreated_by (void) const
 Check if it is safe to call GetCreated_by method. More...
 
void CBlast4_get_request_info_reply_Base::ResetCreated_by (void)
 Reset Created_by data member. More...
 
const TCreated_byCBlast4_get_request_info_reply_Base::GetCreated_by (void) const
 Get the Created_by member data. More...
 
void CBlast4_get_request_info_reply_Base::SetCreated_by (const TCreated_by &value)
 Assign a value to Created_by data member. More...
 
void CBlast4_get_request_info_reply_Base::SetCreated_by (TCreated_by &&value)
 
TCreated_byCBlast4_get_request_info_reply_Base::SetCreated_by (void)
 Assign a value to Created_by data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetQueries (void) const
 Check if a value has been assigned to Queries data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetQueries (void) const
 Check if it is safe to call GetQueries method. More...
 
void CBlast4_get_request_info_reply_Base::ResetQueries (void)
 Reset Queries data member. More...
 
const TQueriesCBlast4_get_request_info_reply_Base::GetQueries (void) const
 Get the Queries member data. More...
 
void CBlast4_get_request_info_reply_Base::SetQueries (TQueries &value)
 Assign a value to Queries data member. More...
 
TQueriesCBlast4_get_request_info_reply_Base::SetQueries (void)
 Assign a value to Queries data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetAlgorithm_options (void) const
 Check if a value has been assigned to Algorithm_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetAlgorithm_options (void) const
 Check if it is safe to call GetAlgorithm_options method. More...
 
void CBlast4_get_request_info_reply_Base::ResetAlgorithm_options (void)
 Reset Algorithm_options data member. More...
 
const TAlgorithm_optionsCBlast4_get_request_info_reply_Base::GetAlgorithm_options (void) const
 Get the Algorithm_options member data. More...
 
void CBlast4_get_request_info_reply_Base::SetAlgorithm_options (TAlgorithm_options &value)
 Assign a value to Algorithm_options data member. More...
 
TAlgorithm_optionsCBlast4_get_request_info_reply_Base::SetAlgorithm_options (void)
 Assign a value to Algorithm_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetProgram_options (void) const
 Check if a value has been assigned to Program_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetProgram_options (void) const
 Check if it is safe to call GetProgram_options method. More...
 
void CBlast4_get_request_info_reply_Base::ResetProgram_options (void)
 Reset Program_options data member. More...
 
const TProgram_optionsCBlast4_get_request_info_reply_Base::GetProgram_options (void) const
 Get the Program_options member data. More...
 
void CBlast4_get_request_info_reply_Base::SetProgram_options (TProgram_options &value)
 Assign a value to Program_options data member. More...
 
TProgram_optionsCBlast4_get_request_info_reply_Base::SetProgram_options (void)
 Assign a value to Program_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetFormat_options (void) const
 Check if a value has been assigned to Format_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetFormat_options (void) const
 Check if it is safe to call GetFormat_options method. More...
 
void CBlast4_get_request_info_reply_Base::ResetFormat_options (void)
 Reset Format_options data member. More...
 
const TFormat_optionsCBlast4_get_request_info_reply_Base::GetFormat_options (void) const
 Get the Format_options member data. More...
 
void CBlast4_get_request_info_reply_Base::SetFormat_options (TFormat_options &value)
 Assign a value to Format_options data member. More...
 
TFormat_optionsCBlast4_get_request_info_reply_Base::SetFormat_options (void)
 Assign a value to Format_options data member. More...
 
bool CBlast4_get_request_info_reply_Base::IsSetSubjects (void) const
 Check if a value has been assigned to Subjects data member. More...
 
bool CBlast4_get_request_info_reply_Base::CanGetSubjects (void) const
 Check if it is safe to call GetSubjects method. More...
 
void CBlast4_get_request_info_reply_Base::ResetSubjects (void)
 Reset Subjects data member. More...
 
const TSubjectsCBlast4_get_request_info_reply_Base::GetSubjects (void) const
 Get the Subjects member data. More...
 
void CBlast4_get_request_info_reply_Base::SetSubjects (TSubjects &value)
 Assign a value to Subjects data member. More...
 
TSubjectsCBlast4_get_request_info_reply_Base::SetSubjects (void)
 Assign a value to Subjects data member. More...
 
virtual void CBlast4_get_request_info_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_request_info_reply_Base::CBlast4_get_request_info_reply_Base (const CBlast4_get_request_info_reply_Base &)
 
CBlast4_get_request_info_reply_BaseCBlast4_get_request_info_reply_Base::operator= (const CBlast4_get_request_info_reply_Base &)
 
 CBlast4_get_request_info_request::CBlast4_get_request_info_request (void)
 
 CBlast4_get_request_info_request::~CBlast4_get_request_info_request (void)
 
 CBlast4_get_request_info_request::CBlast4_get_request_info_request (const CBlast4_get_request_info_request &value)
 
CBlast4_get_request_info_requestCBlast4_get_request_info_request::operator= (const CBlast4_get_request_info_request &value)
 
 CBlast4_get_request_info_request_Base::CBlast4_get_request_info_request_Base (void)
 
virtual CBlast4_get_request_info_request_Base::~CBlast4_get_request_info_request_Base (void)
 
 CBlast4_get_request_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_request_info_request_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_request_info_request_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_request_info_request_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_request_info_request_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_request_info_request_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_request_info_request_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_request_info_request_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
virtual void CBlast4_get_request_info_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_request_info_request_Base::CBlast4_get_request_info_request_Base (const CBlast4_get_request_info_request_Base &)
 
CBlast4_get_request_info_request_BaseCBlast4_get_request_info_request_Base::operator= (const CBlast4_get_request_info_request_Base &)
 
 CBlast4_get_search_info_reply::CBlast4_get_search_info_reply (void)
 
 CBlast4_get_search_info_reply::~CBlast4_get_search_info_reply (void)
 
 CBlast4_get_search_info_reply::CBlast4_get_search_info_reply (const CBlast4_get_search_info_reply &value)
 
CBlast4_get_search_info_replyCBlast4_get_search_info_reply::operator= (const CBlast4_get_search_info_reply &value)
 
 CBlast4_get_search_info_reply_Base::CBlast4_get_search_info_reply_Base (void)
 
virtual CBlast4_get_search_info_reply_Base::~CBlast4_get_search_info_reply_Base (void)
 
 CBlast4_get_search_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_info_reply_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_search_info_reply_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_search_info_reply_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_search_info_reply_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_search_info_reply_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_search_info_reply_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_search_info_reply_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
bool CBlast4_get_search_info_reply_Base::IsSetInfo (void) const
 Check if a value has been assigned to Info data member. More...
 
bool CBlast4_get_search_info_reply_Base::CanGetInfo (void) const
 Check if it is safe to call GetInfo method. More...
 
void CBlast4_get_search_info_reply_Base::ResetInfo (void)
 Reset Info data member. More...
 
const TInfoCBlast4_get_search_info_reply_Base::GetInfo (void) const
 Get the Info member data. More...
 
void CBlast4_get_search_info_reply_Base::SetInfo (TInfo &value)
 Assign a value to Info data member. More...
 
TInfoCBlast4_get_search_info_reply_Base::SetInfo (void)
 Assign a value to Info data member. More...
 
virtual void CBlast4_get_search_info_reply_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_info_reply_Base::CBlast4_get_search_info_reply_Base (const CBlast4_get_search_info_reply_Base &)
 
CBlast4_get_search_info_reply_BaseCBlast4_get_search_info_reply_Base::operator= (const CBlast4_get_search_info_reply_Base &)
 
 CBlast4_get_search_info_request::CBlast4_get_search_info_request (void)
 
 CBlast4_get_search_info_request::~CBlast4_get_search_info_request (void)
 
 CBlast4_get_search_info_request::CBlast4_get_search_info_request (const CBlast4_get_search_info_request &value)
 
CBlast4_get_search_info_requestCBlast4_get_search_info_request::operator= (const CBlast4_get_search_info_request &value)
 
 CBlast4_get_search_info_request_Base::CBlast4_get_search_info_request_Base (void)
 
virtual CBlast4_get_search_info_request_Base::~CBlast4_get_search_info_request_Base (void)
 
 CBlast4_get_search_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_search_info_request_Base::IsSetRequest_id (void) const
 Check if a value has been assigned to Request_id data member. More...
 
bool CBlast4_get_search_info_request_Base::CanGetRequest_id (void) const
 Check if it is safe to call GetRequest_id method. More...
 
void CBlast4_get_search_info_request_Base::ResetRequest_id (void)
 Reset Request_id data member. More...
 
const TRequest_idCBlast4_get_search_info_request_Base::GetRequest_id (void) const
 Get the Request_id member data. More...
 
void CBlast4_get_search_info_request_Base::SetRequest_id (const TRequest_id &value)
 Assign a value to Request_id data member. More...
 
void CBlast4_get_search_info_request_Base::SetRequest_id (TRequest_id &&value)
 
TRequest_idCBlast4_get_search_info_request_Base::SetRequest_id (void)
 Assign a value to Request_id data member. More...
 
bool CBlast4_get_search_info_request_Base::IsSetInfo (void) const
 Check if a value has been assigned to Info data member. More...
 
bool CBlast4_get_search_info_request_Base::CanGetInfo (void) const
 Check if it is safe to call GetInfo method. More...
 
void CBlast4_get_search_info_request_Base::ResetInfo (void)
 Reset Info data member. More...
 
const TInfoCBlast4_get_search_info_request_Base::GetInfo (void) const
 Get the Info member data. More...
 
void CBlast4_get_search_info_request_Base::SetInfo (TInfo &value)
 Assign a value to Info data member. More...
 
TInfoCBlast4_get_search_info_request_Base::SetInfo (void)
 Assign a value to Info data member. More...
 
virtual void CBlast4_get_search_info_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_search_info_request_Base::CBlast4_get_search_info_request_Base (const CBlast4_get_search_info_request_Base &)
 
CBlast4_get_search_info_request_BaseCBlast4_get_search_info_request_Base::operator= (const CBlast4_get_search_info_request_Base &)
 
 CBlast4_get_seq_parts_request::CBlast4_get_seq_parts_request (void)
 
 CBlast4_get_seq_parts_request::~CBlast4_get_seq_parts_request (void)
 
 CBlast4_get_seq_parts_request::CBlast4_get_seq_parts_request (const CBlast4_get_seq_parts_request &value)
 
CBlast4_get_seq_parts_requestCBlast4_get_seq_parts_request::operator= (const CBlast4_get_seq_parts_request &value)
 
 CBlast4_get_seq_parts_request_Base::CBlast4_get_seq_parts_request_Base (void)
 
virtual CBlast4_get_seq_parts_request_Base::~CBlast4_get_seq_parts_request_Base (void)
 
 CBlast4_get_seq_parts_request_Base::DECLARE_INTERNAL_TYPE_INFO ()
 
bool CBlast4_get_seq_parts_request_Base::IsSetDatabase (void) const
 Name of the BLAST database from which to retrieve the sequence data Check if a value has been assigned to Database data member. More...
 
bool CBlast4_get_seq_parts_request_Base::CanGetDatabase (void) const
 Check if it is safe to call GetDatabase method. More...
 
void CBlast4_get_seq_parts_request_Base::ResetDatabase (void)
 Reset Database data member. More...
 
const TDatabaseCBlast4_get_seq_parts_request_Base::GetDatabase (void) const
 Get the Database member data. More...
 
void CBlast4_get_seq_parts_request_Base::SetDatabase (TDatabase &value)
 Assign a value to Database data member. More...
 
TDatabaseCBlast4_get_seq_parts_request_Base::SetDatabase (void)
 Assign a value to Database data member. More...
 
bool CBlast4_get_seq_parts_request_Base::IsSetSeq_locations (void) const
 Allows the specification of ranges of sequence data needed. More...
 
bool CBlast4_get_seq_parts_request_Base::CanGetSeq_locations (void) const
 Check if it is safe to call GetSeq_locations method. More...
 
void CBlast4_get_seq_parts_request_Base::ResetSeq_locations (void)
 Reset Seq_locations data member. More...
 
const TSeq_locationsCBlast4_get_seq_parts_request_Base::GetSeq_locations (void) const
 Get the Seq_locations member data. More...
 
TSeq_locationsCBlast4_get_seq_parts_request_Base::SetSeq_locations (void)
 Assign a value to Seq_locations data member. More...
 
virtual void CBlast4_get_seq_parts_request_Base::Reset (void)
 Reset the whole object. More...
 
 CBlast4_get_seq_parts_request_Base::CBlast4_get_seq_parts_request_Base (const CBlast4_get_seq_parts_request_Base &)
 
CBlast4_get_seq_parts_request_BaseCBlast4_get_seq_parts_request_Base::operator= (const CBlast4_get_seq_parts_request_Base &)
 
 CBlast4Client::CBlast4Client (void)
 
 CBlast4Client::~CBlast4Client (void)
 
 CBlast4Client::CBlast4Client (const CBlast4Client &value)
 
CBlast4ClientCBlast4Client::operator= (const CBlast4Client &value)
 
 CBlast4Client_Base::CBlast4Client_Base (void)
 
virtual CBlast4Client_Base::~CBlast4Client_Base (void)
 
virtual void CBlast4Client_Base::Ask (const TRequest &request, TReply &reply)
 
virtual void CBlast4Client_Base::Ask (const TRequest &request, TReply &reply, TReplyChoice::E_Choice wanted)
 
virtual const TRequestCBlast4Client_Base::GetDefaultRequest (void) const
 
virtual TRequestCBlast4Client_Base::SetDefaultRequest (void)
 
virtual void CBlast4Client_Base::SetDefaultRequest (const TRequest &request)
 
virtual void CBlast4Client_Base::Ask (const TRequestChoice &req, TReply &reply)
 
virtual void CBlast4Client_Base::Ask (const TRequestChoice &req, TReply &reply, TReplyChoice::E_Choice wanted)
 
virtual CRef< CBlast4_finish_params_replyCBlast4Client_Base::AskFinish_params (const CBlast4_finish_params_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_databases_replyCBlast4Client_Base::AskGet_databases (TReply *reply=0)
 
virtual CRef< CBlast4_get_matrices_replyCBlast4Client_Base::AskGet_matrices (TReply *reply=0)
 
virtual CRef< CBlast4_get_parameters_replyCBlast4Client_Base::AskGet_parameters (TReply *reply=0)
 
virtual CRef< CBlast4_get_paramsets_replyCBlast4Client_Base::AskGet_paramsets (TReply *reply=0)
 
virtual CRef< CBlast4_get_programs_replyCBlast4Client_Base::AskGet_programs (TReply *reply=0)
 
virtual CRef< CBlast4_get_search_results_replyCBlast4Client_Base::AskGet_search_results (const CBlast4_get_search_results_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_sequences_replyCBlast4Client_Base::AskGet_sequences (const CBlast4_get_sequences_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_queue_search_replyCBlast4Client_Base::AskQueue_search (const CBlast4_queue_search_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_request_info_replyCBlast4Client_Base::AskGet_request_info (const CBlast4_get_request_info_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_seq_parts_replyCBlast4Client_Base::AskGet_sequence_parts (const CBlast4_get_seq_parts_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_windowmasked_taxids_replyCBlast4Client_Base::AskGet_windowmasked_taxids (TReply *reply=0)
 
virtual CRef< CBlast4_get_protocol_info_replyCBlast4Client_Base::AskGet_protocol_info (const CBlast4_get_protocol_info_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_search_info_replyCBlast4Client_Base::AskGet_search_info (const CBlast4_get_search_info_request &req, TReply *reply=0)
 
virtual CRef< CBlast4_get_databases_ex_replyCBlast4Client_Base::AskGet_databases_ex (const CBlast4_get_databases_ex_request &req, TReply *reply=0)
 
TReplyChoiceCBlast4Client_Base::x_Choice (TReply &reply)
 

Variables

Uint4 CBlast4_get_search_results_reply_Base::m_set_State [1]
 
CRef< TAlignmentsCBlast4_get_search_results_reply_Base::m_Alignments
 
CRef< TPhi_alignmentsCBlast4_get_search_results_reply_Base::m_Phi_alignments
 
list< CRef< CBlast4_mask > > CBlast4_get_search_results_reply_Base::m_Masks
 
list< CRef< CBlast4_ka_block > > CBlast4_get_search_results_reply_Base::m_Ka_blocks
 
list< stringCBlast4_get_search_results_reply_Base::m_Search_stats
 
CRef< TPssmCBlast4_get_search_results_reply_Base::m_Pssm
 
CRef< TSimple_resultsCBlast4_get_search_results_reply_Base::m_Simple_results
 
Uint4 CBlast4_get_search_results_request_Base::m_set_State [1]
 
string CBlast4_get_search_results_request_Base::m_Request_id
 
int CBlast4_get_search_results_request_Base::m_Result_types
 
Uint4 CBlast4_get_search_status_reply_Base::m_set_State [1]
 
string CBlast4_get_search_status_reply_Base::m_Status
 
Uint4 CBlast4_get_search_status_request_Base::m_set_State [1]
 
string CBlast4_get_search_status_request_Base::m_Request_id
 
Uint4 CBlast4_get_search_strategy_request_Base::m_set_State [1]
 
string CBlast4_get_search_strategy_request_Base::m_Request_id
 
Uint4 CBlast4_get_windowmasked_taxids_reply_Base::m_set_State [1]
 
set< intCBlast4_get_windowmasked_taxids_reply_Base::m_data
 
Uint4 CBlast4_alignments_for_query_Base::m_set_State [1]
 
string CBlast4_alignments_for_query_Base::m_Query_id
 
list< CRef< CBlast4_simple_alignment > > CBlast4_alignments_for_query_Base::m_Alignments
 
Uint4 CBlast4_archive_Base::m_set_State [1]
 
CRef< TRequestCBlast4_archive_Base::m_Request
 
CRef< TResultsCBlast4_archive_Base::m_Results
 
list< CRef< CBlast4_error > > CBlast4_archive_Base::m_Messages
 
E_Choice CBlast4_cutoff_Base::m_choice
 
static const char *const CBlast4_cutoff_Base::sm_SelectionNames []
 
TE_value   CBlast4_cutoff_Base::m_E_value
 
TRaw_score   CBlast4_cutoff_Base::m_Raw_score
 
union {
   TE_value   CBlast4_cutoff_Base::m_E_value
 
   TRaw_score   CBlast4_cutoff_Base::m_Raw_score
 
}; 
 
Uint4 CBlast4_database_Base::m_set_State [1]
 
string CBlast4_database_Base::m_Name
 
EBlast4_residue_type CBlast4_database_Base::m_Type
 
Uint4 CBlast4_database_info_Base::m_set_State [1]
 
CRef< TDatabaseCBlast4_database_info_Base::m_Database
 
string CBlast4_database_info_Base::m_Description
 
string CBlast4_database_info_Base::m_Last_updated
 
Int8 CBlast4_database_info_Base::m_Total_length
 
Int8 CBlast4_database_info_Base::m_Num_sequences
 
int CBlast4_database_info_Base::m_Seqtech
 
int CBlast4_database_info_Base::m_Taxid
 
CRef< TExtendedCBlast4_database_info_Base::m_Extended
 
Uint4 CBlast4_error_Base::m_set_State [1]
 
int CBlast4_error_Base::m_Code
 
string CBlast4_error_Base::m_Message
 
Uint4 CBlast4_get_databases_ex_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_database_info > > CBlast4_get_databases_ex_reply_Base::m_data
 
Uint4 CBlast4_get_databases_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_database_info > > CBlast4_get_databases_reply_Base::m_data
 
Uint4 CBlast4_get_matrices_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_matrix_id > > CBlast4_get_matrices_reply_Base::m_data
 
Uint4 CBlast4_get_parameters_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_parameter_info > > CBlast4_get_parameters_reply_Base::m_data
 
Uint4 CBlast4_get_paramsets_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_task_info > > CBlast4_get_paramsets_reply_Base::m_data
 
Uint4 CBlast4_get_programs_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_program_info > > CBlast4_get_programs_reply_Base::m_data
 
Uint4 CBlast4_get_queries_reply_Base::m_set_State [1]
 
CRef< TQueriesCBlast4_get_queries_reply_Base::m_Queries
 
Uint4 CBlast4_get_seq_parts_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_seq_part_data > > CBlast4_get_seq_parts_reply_Base::m_data
 
Uint4 CBlast4_get_sequences_request_Base::m_set_State [1]
 
CRef< TDatabaseCBlast4_get_sequences_request_Base::m_Database
 
list< CRef< CSeq_id > > CBlast4_get_sequences_request_Base::m_Seq_ids
 
bool CBlast4_get_sequences_request_Base::m_Skip_seq_data
 
bool CBlast4_get_sequences_request_Base::m_Target_only
 
Uint4 CBlast4_get_sequences_reply_Base::m_set_State [1]
 
list< CRef< CBioseq > > CBlast4_get_sequences_reply_Base::m_data
 
Uint4 CBlast4_ka_block_Base::m_set_State [1]
 
double CBlast4_ka_block_Base::m_Lambda
 
double CBlast4_ka_block_Base::m_K
 
double CBlast4_ka_block_Base::m_H
 
bool CBlast4_ka_block_Base::m_Gapped
 
Uint4 CBlast4_mask_Base::m_set_State [1]
 
list< CRef< CSeq_loc > > CBlast4_mask_Base::m_Locations
 
EBlast4_frame_type CBlast4_mask_Base::m_Frame
 
Uint4 CBlast4_matrix_id_Base::m_set_State [1]
 
EBlast4_residue_type CBlast4_matrix_id_Base::m_Residue_type
 
string CBlast4_matrix_id_Base::m_Name
 
Uint4 CBlast4_parameter_Base::m_set_State [1]
 
string CBlast4_parameter_Base::m_Name
 
CRef< TValueCBlast4_parameter_Base::m_Value
 
Uint4 CBlast4_parameter_info_Base::m_set_State [1]
 
string CBlast4_parameter_info_Base::m_Name
 
string CBlast4_parameter_info_Base::m_Type
 
Uint4 CBlast4_parameters_Base::m_set_State [1]
 
list< CRef< CBlast4_parameter > > CBlast4_parameters_Base::m_data
 
Uint4 CBlast4_phi_alignments_Base::m_set_State [1]
 
int CBlast4_phi_alignments_Base::m_Num_alignments
 
list< CRef< CSeq_loc > > CBlast4_phi_alignments_Base::m_Seq_locs
 
Uint4 CBlast4_program_info_Base::m_set_State [1]
 
string CBlast4_program_info_Base::m_Program
 
list< stringCBlast4_program_info_Base::m_Services
 
E_Choice CBlast4_queries_Base::m_choice
 
static const char *const CBlast4_queries_Base::sm_SelectionNames []
 
NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_queries_Base::m_Seq_loc_list
 
NCBI_NS_NCBI::CSerialObject *   CBlast4_queries_Base::m_object
 
union {
   NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_queries_Base::m_Seq_loc_list
 
   NCBI_NS_NCBI::CSerialObject *   CBlast4_queries_Base::m_object
 
}; 
 
Uint4 CBlast4_queue_search_reply_Base::m_set_State [1]
 
string CBlast4_queue_search_reply_Base::m_Request_id
 
Uint4 CBlast4_queue_search_request_Base::m_set_State [1]
 
string CBlast4_queue_search_request_Base::m_Program
 
string CBlast4_queue_search_request_Base::m_Service
 
CRef< TQueriesCBlast4_queue_search_request_Base::m_Queries
 
CRef< TSubjectCBlast4_queue_search_request_Base::m_Subject
 
string CBlast4_queue_search_request_Base::m_Paramset
 
CRef< TAlgorithm_optionsCBlast4_queue_search_request_Base::m_Algorithm_options
 
CRef< TProgram_optionsCBlast4_queue_search_request_Base::m_Program_options
 
CRef< TFormat_optionsCBlast4_queue_search_request_Base::m_Format_options
 
Uint4 CBlast4_range_Base::m_set_State [1]
 
int CBlast4_range_Base::m_Start
 
int CBlast4_range_Base::m_End
 
int CBlast4_range_Base::m_Strand
 
Uint4 CBlast4_reply_Base::m_set_State [1]
 
list< CRef< CBlast4_error > > CBlast4_reply_Base::m_Errors
 
CRef< TBodyCBlast4_reply_Base::m_Body
 
E_Choice CBlast4_reply_body_Base::m_choice
 
static const char *const CBlast4_reply_body_Base::sm_SelectionNames []
 
NCBI_NS_NCBI::CSerialObject * CBlast4_reply_body_Base::m_object
 
Uint4 CBlast4_request_Base::m_set_State [1]
 
string CBlast4_request_Base::m_Ident
 
CRef< TBodyCBlast4_request_Base::m_Body
 
E_Choice CBlast4_request_body_Base::m_choice
 
static const char *const CBlast4_request_body_Base::sm_SelectionNames []
 
NCBI_NS_NCBI::CSerialObject *   CBlast4_request_body_Base::m_object
 
union {
   NCBI_NS_NCBI::CSerialObject *   CBlast4_request_body_Base::m_object
 
}; 
 
Uint4 CBlast4_seq_part_data_Base::m_set_State [1]
 
CRef< TIdCBlast4_seq_part_data_Base::m_Id
 
CRef< TDataCBlast4_seq_part_data_Base::m_Data
 
Uint4 CBlast4_simple_alignment_Base::m_set_State [1]
 
string CBlast4_simple_alignment_Base::m_Subject_id
 
double CBlast4_simple_alignment_Base::m_E_value
 
double CBlast4_simple_alignment_Base::m_Bit_score
 
int CBlast4_simple_alignment_Base::m_Num_identities
 
int CBlast4_simple_alignment_Base::m_Num_indels
 
CRef< TFull_query_rangeCBlast4_simple_alignment_Base::m_Full_query_range
 
CRef< TFull_subject_rangeCBlast4_simple_alignment_Base::m_Full_subject_range
 
Uint4 CBlast4_simple_results_Base::m_set_State [1]
 
list< CRef< CBlast4_alignments_for_query > > CBlast4_simple_results_Base::m_All_alignments
 
E_Choice CBlast4_subject_Base::m_choice
 
static const char *const CBlast4_subject_Base::sm_SelectionNames []
 
NCBI_NS_NCBI::CUnionBuffer< TSequences >   CBlast4_subject_Base::m_Sequences
 
NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_subject_Base::m_Seq_loc_list
 
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CBlast4_subject_Base::m_string
 
void *   CBlast4_subject_Base::m_dummy_pointer_for_alignment
 
union {
   NCBI_NS_NCBI::CUnionBuffer< TSequences >   CBlast4_subject_Base::m_Sequences
 
   NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_subject_Base::m_Seq_loc_list
 
   NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CBlast4_subject_Base::m_string
 
   void *   CBlast4_subject_Base::m_dummy_pointer_for_alignment
 
}; 
 
Uint4 CBlast4_task_info_Base::m_set_State [1]
 
string CBlast4_task_info_Base::m_Name
 
string CBlast4_task_info_Base::m_Documentation
 
E_Choice CBlast4_value_Base::m_choice
 
static const char *const CBlast4_value_Base::sm_SelectionNames []
 
TBig_integer   CBlast4_value_Base::m_Big_integer
 
TBoolean   CBlast4_value_Base::m_Boolean
 
TInteger   CBlast4_value_Base::m_Integer
 
TReal   CBlast4_value_Base::m_Real
 
TStrand_type   CBlast4_value_Base::m_Strand_type
 
NCBI_NS_NCBI::CUnionBuffer< TBig_integer_list >   CBlast4_value_Base::m_Big_integer_list
 
NCBI_NS_NCBI::CUnionBuffer< TBioseq_list >   CBlast4_value_Base::m_Bioseq_list
 
NCBI_NS_NCBI::CUnionBuffer< TBoolean_list >   CBlast4_value_Base::m_Boolean_list
 
NCBI_NS_NCBI::CUnionBuffer< TCutoff_list >   CBlast4_value_Base::m_Cutoff_list
 
NCBI_NS_NCBI::CUnionBuffer< TInteger_list >   CBlast4_value_Base::m_Integer_list
 
NCBI_NS_NCBI::CUnionBuffer< TMatrix_list >   CBlast4_value_Base::m_Matrix_list
 
NCBI_NS_NCBI::CUnionBuffer< TReal_list >   CBlast4_value_Base::m_Real_list
 
NCBI_NS_NCBI::CUnionBuffer< TSeq_align_list >   CBlast4_value_Base::m_Seq_align_list
 
NCBI_NS_NCBI::CUnionBuffer< TSeq_id_list >   CBlast4_value_Base::m_Seq_id_list
 
NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_value_Base::m_Seq_loc_list
 
NCBI_NS_NCBI::CUnionBuffer< TStrand_type_list >   CBlast4_value_Base::m_Strand_type_list
 
NCBI_NS_NCBI::CUnionBuffer< TString_list >   CBlast4_value_Base::m_String_list
 
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CBlast4_value_Base::m_string
 
NCBI_NS_NCBI::CSerialObject *   CBlast4_value_Base::m_object
 
union {
   TBig_integer   CBlast4_value_Base::m_Big_integer
 
   TBoolean   CBlast4_value_Base::m_Boolean
 
   TInteger   CBlast4_value_Base::m_Integer
 
   TReal   CBlast4_value_Base::m_Real
 
   TStrand_type   CBlast4_value_Base::m_Strand_type
 
   NCBI_NS_NCBI::CUnionBuffer< TBig_integer_list >   CBlast4_value_Base::m_Big_integer_list
 
   NCBI_NS_NCBI::CUnionBuffer< TBioseq_list >   CBlast4_value_Base::m_Bioseq_list
 
   NCBI_NS_NCBI::CUnionBuffer< TBoolean_list >   CBlast4_value_Base::m_Boolean_list
 
   NCBI_NS_NCBI::CUnionBuffer< TCutoff_list >   CBlast4_value_Base::m_Cutoff_list
 
   NCBI_NS_NCBI::CUnionBuffer< TInteger_list >   CBlast4_value_Base::m_Integer_list
 
   NCBI_NS_NCBI::CUnionBuffer< TMatrix_list >   CBlast4_value_Base::m_Matrix_list
 
   NCBI_NS_NCBI::CUnionBuffer< TReal_list >   CBlast4_value_Base::m_Real_list
 
   NCBI_NS_NCBI::CUnionBuffer< TSeq_align_list >   CBlast4_value_Base::m_Seq_align_list
 
   NCBI_NS_NCBI::CUnionBuffer< TSeq_id_list >   CBlast4_value_Base::m_Seq_id_list
 
   NCBI_NS_NCBI::CUnionBuffer< TSeq_loc_list >   CBlast4_value_Base::m_Seq_loc_list
 
   NCBI_NS_NCBI::CUnionBuffer< TStrand_type_list >   CBlast4_value_Base::m_Strand_type_list
 
   NCBI_NS_NCBI::CUnionBuffer< TString_list >   CBlast4_value_Base::m_String_list
 
   NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CBlast4_value_Base::m_string
 
   NCBI_NS_NCBI::CSerialObject *   CBlast4_value_Base::m_object
 
}; 
 
Uint4 CBlast4_finish_params_request_Base::m_set_State [1]
 
string CBlast4_finish_params_request_Base::m_Program
 
string CBlast4_finish_params_request_Base::m_Service
 
string CBlast4_finish_params_request_Base::m_Paramset
 
CRef< TParamsCBlast4_finish_params_request_Base::m_Params
 
Uint4 CBlast4_get_databases_ex_request_Base::m_set_State [1]
 
CRef< TParamsCBlast4_get_databases_ex_request_Base::m_Params
 
Uint4 CBlast4_get_request_info_reply_Base::m_set_State [1]
 
CRef< TDatabaseCBlast4_get_request_info_reply_Base::m_Database
 
string CBlast4_get_request_info_reply_Base::m_Program
 
string CBlast4_get_request_info_reply_Base::m_Service
 
string CBlast4_get_request_info_reply_Base::m_Created_by
 
CRef< TQueriesCBlast4_get_request_info_reply_Base::m_Queries
 
CRef< TAlgorithm_optionsCBlast4_get_request_info_reply_Base::m_Algorithm_options
 
CRef< TProgram_optionsCBlast4_get_request_info_reply_Base::m_Program_options
 
CRef< TFormat_optionsCBlast4_get_request_info_reply_Base::m_Format_options
 
CRef< TSubjectsCBlast4_get_request_info_reply_Base::m_Subjects
 
Uint4 CBlast4_get_request_info_request_Base::m_set_State [1]
 
string CBlast4_get_request_info_request_Base::m_Request_id
 
Uint4 CBlast4_get_search_info_reply_Base::m_set_State [1]
 
string CBlast4_get_search_info_reply_Base::m_Request_id
 
CRef< TInfoCBlast4_get_search_info_reply_Base::m_Info
 
Uint4 CBlast4_get_search_info_request_Base::m_set_State [1]
 
string CBlast4_get_search_info_request_Base::m_Request_id
 
CRef< TInfoCBlast4_get_search_info_request_Base::m_Info
 
Uint4 CBlast4_get_seq_parts_request_Base::m_set_State [1]
 
CRef< TDatabaseCBlast4_get_seq_parts_request_Base::m_Database
 
list< CRef< CSeq_interval > > CBlast4_get_seq_parts_request_Base::m_Seq_locations
 
CRef< TRequestCBlast4Client_Base::m_DefaultRequest
 

Detailed Description

Typedef Documentation

◆ C_E

Definition at line 90 of file Blast4_simple_results_.hpp.

◆ TAlgorithm_options [1/2]

Definition at line 107 of file Blast4_queue_search_reques_.hpp.

◆ TAlgorithm_options [2/2]

Definition at line 97 of file Blast_get_reque_info_reply_.hpp.

◆ TAlignments [1/2]

Definition at line 95 of file Blas_get_searc_resul_reply_.hpp.

◆ TAlignments [2/2]

Definition at line 92 of file Blast4_alignment_for_query_.hpp.

◆ TAll_alignments

Definition at line 91 of file Blast4_simple_results_.hpp.

◆ TBig_integer

Definition at line 183 of file Blast4_value_.hpp.

◆ TBig_integer_list

Definition at line 195 of file Blast4_value_.hpp.

◆ TBioseq

Definition at line 184 of file Blast4_value_.hpp.

◆ TBioseq_list

Definition at line 196 of file Blast4_value_.hpp.

◆ TBioseq_set [1/2]

Definition at line 159 of file Blast4_queries_.hpp.

◆ TBioseq_set [2/2]

Definition at line 207 of file Blast4_value_.hpp.

◆ TBit_score

Definition at line 92 of file Blast4_simple_alignment_.hpp.

◆ TBody [1/2]

Definition at line 130 of file Blast4_reply_.hpp.

◆ TBody [2/2]

Definition at line 129 of file Blast4_request_.hpp.

◆ TBoolean

Definition at line 185 of file Blast4_value_.hpp.

◆ TBoolean_list

Definition at line 197 of file Blast4_value_.hpp.

◆ TCode

Definition at line 124 of file Blast4_error_.hpp.

◆ TCreated_by

Definition at line 95 of file Blast_get_reque_info_reply_.hpp.

◆ TCutoff

Definition at line 186 of file Blast4_value_.hpp.

◆ TCutoff_list

Definition at line 198 of file Blast4_value_.hpp.

◆ Tdata [1/10]

Definition at line 85 of file Blas_get_windo_taxid_reply_.hpp.

◆ Tdata [2/10]

Definition at line 89 of file Blast4_get_databa_ex_reply_.hpp.

◆ Tdata [3/10]

Definition at line 89 of file Blast4_get_databases_reply_.hpp.

◆ Tdata [4/10]

Definition at line 89 of file Blast4_get_matrices_reply_.hpp.

◆ Tdata [5/10]

Definition at line 89 of file Blast4_get_parameter_reply_.hpp.

◆ Tdata [6/10]

Definition at line 92 of file Blast4_get_paramsets_reply_.hpp.

◆ Tdata [7/10]

Definition at line 89 of file Blast4_get_programs_reply_.hpp.

◆ Tdata [8/10]

Definition at line 89 of file Blast4_get_seq_parts_reply_.hpp.

◆ Tdata [9/10]

Definition at line 89 of file Blast4_get_sequences_reply_.hpp.

◆ Tdata [10/10]

Definition at line 89 of file Blast4_parameters_.hpp.

◆ TData

Definition at line 89 of file Blast4_seq_part_data_.hpp.

◆ TDatabase [1/5]

Definition at line 91 of file Blast4_database_info_.hpp.

◆ TDatabase [2/5]

Definition at line 91 of file Blast4_get_sequenc_request_.hpp.

◆ TDatabase [3/5]

Definition at line 151 of file Blast4_subject_.hpp.

◆ TDatabase [4/5]

Definition at line 92 of file Blast_get_reque_info_reply_.hpp.

◆ TDatabase [5/5]

Definition at line 91 of file Blast_get_seq_parts_reques_.hpp.

◆ TDescription

Definition at line 92 of file Blast4_database_info_.hpp.

◆ TDocumentation

Definition at line 87 of file Blast4_task_info_.hpp.

◆ TE_value [1/2]

Definition at line 179 of file Blast4_cutoff_.hpp.

◆ TE_value [2/2]

Definition at line 91 of file Blast4_simple_alignment_.hpp.

◆ TEnd

Definition at line 83 of file Blast4_range_.hpp.

◆ TErrors

Definition at line 129 of file Blast4_reply_.hpp.

◆ TExtended

Definition at line 98 of file Blast4_database_info_.hpp.

◆ TFinish_params [1/2]

Definition at line 173 of file Blast4_reply_body_.hpp.

◆ TFinish_params [2/2]

Definition at line 165 of file Blast4_request_body_.hpp.

◆ TFormat_options [1/2]

Definition at line 109 of file Blast4_queue_search_reques_.hpp.

◆ TFormat_options [2/2]

Definition at line 99 of file Blast_get_reque_info_reply_.hpp.

◆ TFrame

Definition at line 105 of file Blast4_mask_.hpp.

◆ TFull_query_range

Definition at line 95 of file Blast4_simple_alignment_.hpp.

◆ TFull_subject_range

Definition at line 96 of file Blast4_simple_alignment_.hpp.

◆ TGapped

Definition at line 84 of file Blast4_ka_block_.hpp.

◆ TGet_databases

Definition at line 174 of file Blast4_reply_body_.hpp.

◆ TGet_databases_ex [1/2]

Definition at line 188 of file Blast4_reply_body_.hpp.

◆ TGet_databases_ex [2/2]

Definition at line 173 of file Blast4_request_body_.hpp.

◆ TGet_matrices

Definition at line 175 of file Blast4_reply_body_.hpp.

◆ TGet_parameters

Definition at line 176 of file Blast4_reply_body_.hpp.

◆ TGet_paramsets

Definition at line 177 of file Blast4_reply_body_.hpp.

◆ TGet_programs

Definition at line 178 of file Blast4_reply_body_.hpp.

◆ TGet_protocol_info [1/2]

Definition at line 186 of file Blast4_reply_body_.hpp.

◆ TGet_protocol_info [2/2]

Definition at line 171 of file Blast4_request_body_.hpp.

◆ TGet_queries

Definition at line 182 of file Blast4_reply_body_.hpp.

◆ TGet_request_info [1/2]

Definition at line 183 of file Blast4_reply_body_.hpp.

◆ TGet_request_info [2/2]

Definition at line 169 of file Blast4_request_body_.hpp.

◆ TGet_search_info [1/2]

Definition at line 187 of file Blast4_reply_body_.hpp.

◆ TGet_search_info [2/2]

Definition at line 172 of file Blast4_request_body_.hpp.

◆ TGet_search_results [1/2]

Definition at line 179 of file Blast4_reply_body_.hpp.

◆ TGet_search_results [2/2]

Definition at line 166 of file Blast4_request_body_.hpp.

◆ TGet_sequence_parts [1/2]

Definition at line 184 of file Blast4_reply_body_.hpp.

◆ TGet_sequence_parts [2/2]

Definition at line 170 of file Blast4_request_body_.hpp.

◆ TGet_sequences [1/2]

Definition at line 180 of file Blast4_reply_body_.hpp.

◆ TGet_sequences [2/2]

Definition at line 167 of file Blast4_request_body_.hpp.

◆ TGet_windowmasked_taxids

Definition at line 185 of file Blast4_reply_body_.hpp.

◆ TH

typedef double CBlast4_ka_block_Base::TH

Definition at line 83 of file Blast4_ka_block_.hpp.

◆ TId

Definition at line 88 of file Blast4_seq_part_data_.hpp.

◆ TIdent

Definition at line 128 of file Blast4_request_.hpp.

◆ TInfo [1/2]

Definition at line 90 of file Blast_get_searc_info_reply_.hpp.

◆ TInfo [2/2]

Definition at line 91 of file Blast_get_searc_info_reque_.hpp.

◆ TInteger

Definition at line 187 of file Blast4_value_.hpp.

◆ TInteger_list

Definition at line 199 of file Blast4_value_.hpp.

◆ TK

typedef double CBlast4_ka_block_Base::TK

Definition at line 82 of file Blast4_ka_block_.hpp.

◆ TKa_blocks

Definition at line 98 of file Blas_get_searc_resul_reply_.hpp.

◆ TLambda

Definition at line 81 of file Blast4_ka_block_.hpp.

◆ TLast_updated

Definition at line 93 of file Blast4_database_info_.hpp.

◆ TLocations

Definition at line 104 of file Blast4_mask_.hpp.

◆ TMasks

Definition at line 97 of file Blas_get_searc_resul_reply_.hpp.

◆ TMatrix

Definition at line 188 of file Blast4_value_.hpp.

◆ TMatrix_list

Definition at line 200 of file Blast4_value_.hpp.

◆ TmemberIndex [1/35]

Definition at line 114 of file Blas_get_searc_resul_reply_.hpp.

◆ TmemberIndex [2/35]

Definition at line 94 of file Blas_get_searc_resul_reque_.hpp.

◆ TmemberIndex [3/35]

Definition at line 93 of file Blas_get_searc_statu_reply_.hpp.

◆ TmemberIndex [4/35]

Definition at line 93 of file Blas_get_searc_statu_reque_.hpp.

◆ TmemberIndex [5/35]

Definition at line 93 of file Blas_get_searc_strat_reque_.hpp.

◆ TmemberIndex [6/35]

Definition at line 100 of file Blast4_alignment_for_query_.hpp.

◆ TmemberIndex [7/35]

Definition at line 104 of file Blast4_archive_.hpp.

◆ TmemberIndex [8/35]

Definition at line 95 of file Blast4_database_.hpp.

◆ TmemberIndex [9/35]

Definition at line 112 of file Blast4_database_info_.hpp.

◆ TmemberIndex [10/35]

Definition at line 133 of file Blast4_error_.hpp.

◆ TmemberIndex [11/35]

Definition at line 92 of file Blast4_get_queries_reply_.hpp.

◆ TmemberIndex [12/35]

Definition at line 104 of file Blast4_get_sequenc_request_.hpp.

◆ TmemberIndex [13/35]

Definition at line 94 of file Blast4_ka_block_.hpp.

◆ TmemberIndex [14/35]

Definition at line 113 of file Blast4_mask_.hpp.

◆ TmemberIndex [15/35]

Definition at line 95 of file Blast4_matrix_id_.hpp.

◆ TmemberIndex [16/35]

Definition at line 98 of file Blast4_parameter_.hpp.

◆ TmemberIndex [17/35]

Definition at line 94 of file Blast4_parameter_info_.hpp.

◆ TmemberIndex [18/35]

Definition at line 98 of file Blast4_phi_alignments_.hpp.

◆ TmemberIndex [19/35]

Definition at line 95 of file Blast4_program_info_.hpp.

◆ TmemberIndex [20/35]

Definition at line 92 of file Blast4_queue_search_reply_.hpp.

◆ TmemberIndex [21/35]

Definition at line 123 of file Blast4_queue_search_reques_.hpp.

◆ TmemberIndex [22/35]

Definition at line 93 of file Blast4_range_.hpp.

◆ TmemberIndex [23/35]

Definition at line 138 of file Blast4_reply_.hpp.

◆ TmemberIndex [24/35]

Definition at line 137 of file Blast4_request_.hpp.

◆ TmemberIndex [25/35]

Definition at line 97 of file Blast4_seq_part_data_.hpp.

◆ TmemberIndex [26/35]

Definition at line 109 of file Blast4_simple_alignment_.hpp.

◆ TmemberIndex [27/35]

Definition at line 98 of file Blast4_simple_results_.hpp.

◆ TmemberIndex [28/35]

Definition at line 95 of file Blast4_task_info_.hpp.

◆ TmemberIndex [29/35]

Definition at line 103 of file Blast_finish_params_reques_.hpp.

◆ TmemberIndex [30/35]

Definition at line 92 of file Blast_get_databa_ex_reques_.hpp.

◆ TmemberIndex [31/35]

Definition at line 115 of file Blast_get_reque_info_reply_.hpp.

◆ TmemberIndex [32/35]

Definition at line 93 of file Blast_get_reque_info_reque_.hpp.

◆ TmemberIndex [33/35]

Definition at line 98 of file Blast_get_searc_info_reply_.hpp.

◆ TmemberIndex [34/35]

Definition at line 99 of file Blast_get_searc_info_reque_.hpp.

◆ TmemberIndex [35/35]

Definition at line 100 of file Blast_get_seq_parts_reques_.hpp.

◆ TMessage

Definition at line 125 of file Blast4_error_.hpp.

◆ TMessages

Definition at line 95 of file Blast4_archive_.hpp.

◆ TName [1/5]

Definition at line 86 of file Blast4_database_.hpp.

◆ TName [2/5]

Definition at line 87 of file Blast4_matrix_id_.hpp.

◆ TName [3/5]

Definition at line 89 of file Blast4_parameter_.hpp.

◆ TName [4/5]

Definition at line 85 of file Blast4_parameter_info_.hpp.

◆ TName [5/5]

Definition at line 86 of file Blast4_task_info_.hpp.

◆ TNum_alignments

Definition at line 89 of file Blast4_phi_alignments_.hpp.

◆ TNum_identities

Definition at line 93 of file Blast4_simple_alignment_.hpp.

◆ TNum_indels

Definition at line 94 of file Blast4_simple_alignment_.hpp.

◆ TNum_sequences

Definition at line 95 of file Blast4_database_info_.hpp.

◆ TParams [1/2]

Definition at line 93 of file Blast_finish_params_reques_.hpp.

◆ TParams [2/2]

Definition at line 85 of file Blast_get_databa_ex_reques_.hpp.

◆ TParamset [1/2]

Definition at line 106 of file Blast4_queue_search_reques_.hpp.

◆ TParamset [2/2]

Definition at line 92 of file Blast_finish_params_reques_.hpp.

◆ Tparent [1/108]

Definition at line 67 of file Blas_get_searc_resul_reply.hpp.

◆ Tparent [2/108]

Definition at line 84 of file Blas_get_searc_resul_reply_.hpp.

◆ Tparent [3/108]

Definition at line 67 of file Blas_get_searc_resul_reque.hpp.

◆ Tparent [4/108]

Definition at line 74 of file Blas_get_searc_resul_reque_.hpp.

◆ Tparent [5/108]

Definition at line 67 of file Blas_get_searc_statu_reply.hpp.

◆ Tparent [6/108]

Definition at line 75 of file Blas_get_searc_statu_reply_.hpp.

◆ Tparent [7/108]

Definition at line 67 of file Blas_get_searc_statu_reque.hpp.

◆ Tparent [8/108]

Definition at line 75 of file Blas_get_searc_statu_reque_.hpp.

◆ Tparent [9/108]

Definition at line 67 of file Blas_get_searc_strat_reply.hpp.

◆ Tparent [10/108]

Definition at line 76 of file Blas_get_searc_strat_reply_.hpp.

◆ Tparent [11/108]

Definition at line 67 of file Blas_get_searc_strat_reque.hpp.

◆ Tparent [12/108]

Definition at line 75 of file Blas_get_searc_strat_reque_.hpp.

◆ Tparent [13/108]

Definition at line 67 of file Blas_get_windo_taxid_reply.hpp.

◆ Tparent [14/108]

Definition at line 74 of file Blas_get_windo_taxid_reply_.hpp.

◆ Tparent [15/108]

Definition at line 67 of file Blast4_alignment_for_query.hpp.

◆ Tparent [16/108]

Definition at line 80 of file Blast4_alignment_for_query_.hpp.

◆ Tparent [17/108]

Definition at line 67 of file Blast4_archive.hpp.

◆ Tparent [18/108]

Definition at line 82 of file Blast4_archive_.hpp.

◆ Tparent [19/108]

Definition at line 67 of file Blast4_cutoff.hpp.

◆ Tparent [20/108]

Definition at line 109 of file Blast4_cutoff_.hpp.

◆ Tparent [21/108]

Definition at line 75 of file Blast4_database_.hpp.

◆ Tparent [22/108]

Definition at line 67 of file Blast4_database_info.hpp.

◆ Tparent [23/108]

Definition at line 80 of file Blast4_database_info_.hpp.

◆ Tparent [24/108]

Definition at line 67 of file Blast4_error.hpp.

◆ Tparent [25/108]

Definition at line 113 of file Blast4_error_.hpp.

◆ Tparent [26/108]

Definition at line 67 of file Blast4_finish_params_reply.hpp.

◆ Tparent [27/108]

Definition at line 74 of file Blast4_finish_params_reply_.hpp.

◆ Tparent [28/108]

Definition at line 67 of file Blast4_get_databa_ex_reply.hpp.

◆ Tparent [29/108]

Definition at line 78 of file Blast4_get_databa_ex_reply_.hpp.

◆ Tparent [30/108]

Definition at line 67 of file Blast4_get_databases_reply.hpp.

◆ Tparent [31/108]

Definition at line 78 of file Blast4_get_databases_reply_.hpp.

◆ Tparent [32/108]

Definition at line 67 of file Blast4_get_matrices_reply.hpp.

◆ Tparent [33/108]

Definition at line 78 of file Blast4_get_matrices_reply_.hpp.

◆ Tparent [34/108]

Definition at line 67 of file Blast4_get_parameter_reply.hpp.

◆ Tparent [35/108]

Definition at line 78 of file Blast4_get_parameter_reply_.hpp.

◆ Tparent [36/108]

Definition at line 67 of file Blast4_get_paramsets_reply.hpp.

◆ Tparent [37/108]

Definition at line 81 of file Blast4_get_paramsets_reply_.hpp.

◆ Tparent [38/108]

Definition at line 67 of file Blast4_get_programs_reply.hpp.

◆ Tparent [39/108]

Definition at line 78 of file Blast4_get_programs_reply_.hpp.

◆ Tparent [40/108]

Definition at line 67 of file Blast4_get_queries_reply.hpp.

◆ Tparent [41/108]

Definition at line 74 of file Blast4_get_queries_reply_.hpp.

◆ Tparent [42/108]

Definition at line 67 of file Blast4_get_seq_parts_reply.hpp.

◆ Tparent [43/108]

Definition at line 78 of file Blast4_get_seq_parts_reply_.hpp.

◆ Tparent [44/108]

Definition at line 67 of file Blast4_get_sequenc_request.hpp.

◆ Tparent [45/108]

Definition at line 80 of file Blast4_get_sequenc_request_.hpp.

◆ Tparent [46/108]

Definition at line 67 of file Blast4_get_sequences_reply.hpp.

◆ Tparent [47/108]

Definition at line 78 of file Blast4_get_sequences_reply_.hpp.

◆ Tparent [48/108]

Definition at line 67 of file Blast4_ka_block.hpp.

◆ Tparent [49/108]

Definition at line 70 of file Blast4_ka_block_.hpp.

◆ Tparent [50/108]

Definition at line 67 of file Blast4_mask.hpp.

◆ Tparent [51/108]

Definition at line 93 of file Blast4_mask_.hpp.

◆ Tparent [52/108]

Definition at line 67 of file Blast4_matrix_id.hpp.

◆ Tparent [53/108]

Definition at line 75 of file Blast4_matrix_id_.hpp.

◆ Tparent [54/108]

Definition at line 67 of file Blast4_parameter.hpp.

◆ Tparent [55/108]

Definition at line 78 of file Blast4_parameter_.hpp.

◆ Tparent [56/108]

Definition at line 67 of file Blast4_parameter_info.hpp.

◆ Tparent [57/108]

Definition at line 74 of file Blast4_parameter_info_.hpp.

◆ Tparent [58/108]

Definition at line 78 of file Blast4_parameters_.hpp.

◆ Tparent [59/108]

Definition at line 67 of file Blast4_phi_alignments.hpp.

◆ Tparent [60/108]

Definition at line 78 of file Blast4_phi_alignments_.hpp.

◆ Tparent [61/108]

Definition at line 67 of file Blast4_program_info.hpp.

◆ Tparent [62/108]

Definition at line 75 of file Blast4_program_info_.hpp.

◆ Tparent [63/108]

Definition at line 86 of file Blast4_queries_.hpp.

◆ Tparent [64/108]

Definition at line 67 of file Blast4_queue_search_reply.hpp.

◆ Tparent [65/108]

Definition at line 74 of file Blast4_queue_search_reply_.hpp.

◆ Tparent [66/108]

Definition at line 67 of file Blast4_queue_search_reques.hpp.

◆ Tparent [67/108]

Definition at line 91 of file Blast4_queue_search_reques_.hpp.

◆ Tparent [68/108]

Definition at line 71 of file Blast4_range_.hpp.

◆ Tparent [69/108]

Definition at line 67 of file Blast4_reply.hpp.

◆ Tparent [70/108]

Definition at line 118 of file Blast4_reply_.hpp.

◆ Tparent [71/108]

Definition at line 67 of file Blast4_reply_body.hpp.

◆ Tparent [72/108]

Definition at line 89 of file Blast4_reply_body_.hpp.

◆ Tparent [73/108]

Definition at line 67 of file Blast4_request.hpp.

◆ Tparent [74/108]

Definition at line 117 of file Blast4_request_.hpp.

◆ Tparent [75/108]

Definition at line 67 of file Blast4_request_body.hpp.

◆ Tparent [76/108]

Definition at line 82 of file Blast4_request_body_.hpp.

◆ Tparent [77/108]

Definition at line 67 of file Blast4_seq_part_data.hpp.

◆ Tparent [78/108]

Definition at line 77 of file Blast4_seq_part_data_.hpp.

◆ Tparent [79/108]

Definition at line 67 of file Blast4_simple_alignment.hpp.

◆ Tparent [80/108]

Definition at line 79 of file Blast4_simple_alignment_.hpp.

◆ Tparent [81/108]

Definition at line 67 of file Blast4_simple_results.hpp.

◆ Tparent [82/108]

Definition at line 79 of file Blast4_simple_results_.hpp.

◆ Tparent [83/108]

Definition at line 67 of file Blast4_subject.hpp.

◆ Tparent [84/108]

Definition at line 80 of file Blast4_subject_.hpp.

◆ Tparent [85/108]

Definition at line 67 of file Blast4_task_info.hpp.

◆ Tparent [86/108]

Definition at line 75 of file Blast4_task_info_.hpp.

◆ Tparent [87/108]

Definition at line 67 of file Blast4_value.hpp.

◆ Tparent [88/108]

Definition at line 88 of file Blast4_value_.hpp.

◆ Tparent [89/108]

Definition at line 67 of file Blast_finish_params_reques.hpp.

◆ Tparent [90/108]

Definition at line 79 of file Blast_finish_params_reques_.hpp.

◆ Tparent [91/108]

Definition at line 67 of file Blast_get_databa_ex_reques.hpp.

◆ Tparent [92/108]

Definition at line 74 of file Blast_get_databa_ex_reques_.hpp.

◆ Tparent [93/108]

Definition at line 67 of file Blast_get_proto_info_reply.hpp.

◆ Tparent [94/108]

Definition at line 74 of file Blast_get_proto_info_reply_.hpp.

◆ Tparent [95/108]

Definition at line 67 of file Blast_get_proto_info_reque.hpp.

◆ Tparent [96/108]

Definition at line 75 of file Blast_get_proto_info_reque_.hpp.

◆ Tparent [97/108]

Definition at line 67 of file Blast_get_reque_info_reply.hpp.

◆ Tparent [98/108]

Definition at line 81 of file Blast_get_reque_info_reply_.hpp.

◆ Tparent [99/108]

Definition at line 67 of file Blast_get_reque_info_reque.hpp.

◆ Tparent [100/108]

Definition at line 75 of file Blast_get_reque_info_reque_.hpp.

◆ Tparent [101/108]

Definition at line 67 of file Blast_get_searc_info_reply.hpp.

◆ Tparent [102/108]

Definition at line 78 of file Blast_get_searc_info_reply_.hpp.

◆ Tparent [103/108]

Definition at line 67 of file Blast_get_searc_info_reque.hpp.

◆ Tparent [104/108]

Definition at line 79 of file Blast_get_searc_info_reque_.hpp.

◆ Tparent [105/108]

Definition at line 67 of file Blast_get_seq_parts_reques.hpp.

◆ Tparent [106/108]

Definition at line 80 of file Blast_get_seq_parts_reques_.hpp.

◆ Tparent [107/108]

Definition at line 67 of file blastclient.hpp.

◆ Tparent [108/108]

Definition at line 78 of file blastclient_.hpp.

◆ TPhi_alignments

Definition at line 96 of file Blas_get_searc_resul_reply_.hpp.

◆ TProgram [1/4]

Definition at line 86 of file Blast4_program_info_.hpp.

◆ TProgram [2/4]

Definition at line 102 of file Blast4_queue_search_reques_.hpp.

◆ TProgram [3/4]

Definition at line 90 of file Blast_finish_params_reques_.hpp.

◆ TProgram [4/4]

Definition at line 93 of file Blast_get_reque_info_reply_.hpp.

◆ TProgram_options [1/2]

Definition at line 108 of file Blast4_queue_search_reques_.hpp.

◆ TProgram_options [2/2]

Definition at line 98 of file Blast_get_reque_info_reply_.hpp.

◆ TPssm [1/2]

Definition at line 100 of file Blas_get_searc_resul_reply_.hpp.

◆ TPssm [2/2]

Definition at line 157 of file Blast4_queries_.hpp.

◆ TQueries [1/3]

Definition at line 85 of file Blast4_get_queries_reply_.hpp.

◆ TQueries [2/3]

Definition at line 104 of file Blast4_queue_search_reques_.hpp.

◆ TQueries [3/3]

Definition at line 96 of file Blast_get_reque_info_reply_.hpp.

◆ TQuery_id

Definition at line 91 of file Blast4_alignment_for_query_.hpp.

◆ TQuery_mask

Definition at line 209 of file Blast4_value_.hpp.

◆ TQueue_search [1/2]

Definition at line 181 of file Blast4_reply_body_.hpp.

◆ TQueue_search [2/2]

Definition at line 168 of file Blast4_request_body_.hpp.

◆ TRaw_score

Definition at line 180 of file Blast4_cutoff_.hpp.

◆ TReal

typedef double CBlast4_value_Base::TReal

Definition at line 189 of file Blast4_value_.hpp.

◆ TReal_list

typedef list< double > CBlast4_value_Base::TReal_list

Definition at line 201 of file Blast4_value_.hpp.

◆ TReply

Definition at line 86 of file blastclient_.hpp.

◆ TReplyChoice

Definition at line 88 of file blastclient_.hpp.

◆ TRequest [1/2]

Definition at line 93 of file Blast4_archive_.hpp.

◆ TRequest [2/2]

Definition at line 85 of file blastclient_.hpp.

◆ TRequest_id [1/7]

Definition at line 85 of file Blas_get_searc_resul_reque_.hpp.

◆ TRequest_id [2/7]

Definition at line 86 of file Blas_get_searc_statu_reque_.hpp.

◆ TRequest_id [3/7]

Definition at line 86 of file Blas_get_searc_strat_reque_.hpp.

◆ TRequest_id [4/7]

Definition at line 85 of file Blast4_queue_search_reply_.hpp.

◆ TRequest_id [5/7]

Definition at line 86 of file Blast_get_reque_info_reque_.hpp.

◆ TRequest_id [6/7]

Definition at line 89 of file Blast_get_searc_info_reply_.hpp.

◆ TRequest_id [7/7]

Definition at line 90 of file Blast_get_searc_info_reque_.hpp.

◆ TRequestChoice

Definition at line 87 of file blastclient_.hpp.

◆ TResidue_type

Definition at line 86 of file Blast4_matrix_id_.hpp.

◆ TResult_types

Definition at line 86 of file Blas_get_searc_resul_reque_.hpp.

◆ TResults

Definition at line 94 of file Blast4_archive_.hpp.

◆ TSearch_stats

Definition at line 99 of file Blas_get_searc_resul_reply_.hpp.

◆ TSeq_align

Definition at line 190 of file Blast4_value_.hpp.

◆ TSeq_align_list

Definition at line 202 of file Blast4_value_.hpp.

◆ TSeq_align_set

Definition at line 208 of file Blast4_value_.hpp.

◆ TSeq_id

Definition at line 191 of file Blast4_value_.hpp.

◆ TSeq_id_list

Definition at line 203 of file Blast4_value_.hpp.

◆ TSeq_ids

Definition at line 92 of file Blast4_get_sequenc_request_.hpp.

◆ TSeq_loc

Definition at line 192 of file Blast4_value_.hpp.

◆ TSeq_loc_list [1/3]

Definition at line 158 of file Blast4_queries_.hpp.

◆ TSeq_loc_list [2/3]

Definition at line 153 of file Blast4_subject_.hpp.

◆ TSeq_loc_list [3/3]

Definition at line 204 of file Blast4_value_.hpp.

◆ TSeq_locations

Definition at line 92 of file Blast_get_seq_parts_reques_.hpp.

◆ TSeq_locs

Definition at line 90 of file Blast4_phi_alignments_.hpp.

◆ TSeqtech

Definition at line 96 of file Blast4_database_info_.hpp.

◆ TSequences

Definition at line 152 of file Blast4_subject_.hpp.

◆ TService [1/3]

Definition at line 103 of file Blast4_queue_search_reques_.hpp.

◆ TService [2/3]

Definition at line 91 of file Blast_finish_params_reques_.hpp.

◆ TService [3/3]

Definition at line 94 of file Blast_get_reque_info_reply_.hpp.

◆ TServices

Definition at line 87 of file Blast4_program_info_.hpp.

◆ TSimple_results

Definition at line 101 of file Blas_get_searc_resul_reply_.hpp.

◆ TSkip_seq_data

Definition at line 93 of file Blast4_get_sequenc_request_.hpp.

◆ TStart

Definition at line 82 of file Blast4_range_.hpp.

◆ TStatus

Definition at line 86 of file Blas_get_searc_statu_reply_.hpp.

◆ TStrand

Definition at line 84 of file Blast4_range_.hpp.

◆ TStrand_type

Definition at line 193 of file Blast4_value_.hpp.

◆ TStrand_type_list

Definition at line 205 of file Blast4_value_.hpp.

◆ TString

Definition at line 194 of file Blast4_value_.hpp.

◆ TString_list

Definition at line 206 of file Blast4_value_.hpp.

◆ TSubject

Definition at line 105 of file Blast4_queue_search_reques_.hpp.

◆ TSubject_id

Definition at line 90 of file Blast4_simple_alignment_.hpp.

◆ TSubjects

Definition at line 100 of file Blast_get_reque_info_reply_.hpp.

◆ TTarget_only

Definition at line 94 of file Blast4_get_sequenc_request_.hpp.

◆ TTaxid

Definition at line 97 of file Blast4_database_info_.hpp.

◆ TTotal_length

Definition at line 94 of file Blast4_database_info_.hpp.

◆ TType [1/2]

Definition at line 87 of file Blast4_database_.hpp.

◆ TType [2/2]

Definition at line 86 of file Blast4_parameter_info_.hpp.

◆ TValue

Definition at line 90 of file Blast4_parameter_.hpp.

Enumeration Type Documentation

◆ E_Choice [1/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_E_value 
e_Raw_score 

Definition at line 121 of file Blast4_cutoff_.hpp.

◆ E_Choice [2/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_Pssm 
e_Seq_loc_list 
e_Bioseq_set 

Definition at line 98 of file Blast4_queries_.hpp.

◆ E_Choice [3/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_Finish_params 
e_Get_databases 
e_Get_matrices 
e_Get_parameters 
e_Get_paramsets 
e_Get_programs 
e_Get_search_results 
e_Get_sequences 
e_Queue_search 
e_Get_queries 
e_Get_request_info 
e_Get_sequence_parts 
e_Get_windowmasked_taxids 
e_Get_protocol_info 
e_Get_search_info 
e_Get_databases_ex 

Definition at line 101 of file Blast4_reply_body_.hpp.

◆ E_Choice [4/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_Finish_params 
e_Get_databases 

Get all available BLAST databases.

e_Get_matrices 

Get supported scoring matrices.

e_Get_parameters 
e_Get_paramsets 
e_Get_programs 
e_Get_search_results 
e_Get_sequences 
e_Queue_search 
e_Get_request_info 
e_Get_sequence_parts 
e_Get_windowmasked_taxids 
e_Get_protocol_info 

Get version and info about some extended methods.

e_Get_search_info 

Get search info: status, title and etc.

e_Get_databases_ex 

OLD OK get-databases-ex NULL.

Definition at line 94 of file Blast4_request_body_.hpp.

◆ E_Choice [5/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_Database 
e_Sequences 
e_Seq_loc_list 

Definition at line 92 of file Blast4_subject_.hpp.

◆ E_Choice [6/6]

Choice variants.

Enumerator
e_not_set 

No variant selected.

e_Big_integer 

scalar types

e_Bioseq 
e_Boolean 
e_Cutoff 
e_Integer 
e_Matrix 
e_Real 
e_Seq_align 
e_Seq_id 
e_Seq_loc 
e_Strand_type 
e_String 
e_Big_integer_list 

lists of scalar types

e_Bioseq_list 
e_Boolean_list 
e_Cutoff_list 
e_Integer_list 
e_Matrix_list 
e_Real_list 
e_Seq_align_list 
e_Seq_id_list 
e_Seq_loc_list 
e_Strand_type_list 
e_String_list 
e_Bioseq_set 

imported collection types

e_Seq_align_set 
e_Query_mask 

Intended to represent user-provided masking locations for a single query sequence (name field in Blast4-parameter should be "LCaseMask"). Multiple Blast4-parameters of this type are needed to specify masking locations for multiple queries.

Definition at line 100 of file Blast4_value_.hpp.

◆ E_ChoiceStopper [1/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Raw_score+1

Definition at line 127 of file Blast4_cutoff_.hpp.

◆ E_ChoiceStopper [2/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Bioseq_set+1

Definition at line 105 of file Blast4_queries_.hpp.

◆ E_ChoiceStopper [3/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Get_databases_ex+1

Definition at line 121 of file Blast4_reply_body_.hpp.

◆ E_ChoiceStopper [4/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Get_databases_ex+1

Definition at line 113 of file Blast4_request_body_.hpp.

◆ E_ChoiceStopper [5/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Seq_loc_list+1

Definition at line 99 of file Blast4_subject_.hpp.

◆ E_ChoiceStopper [6/6]

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice 

== e_Query_mask+1

Definition at line 131 of file Blast4_value_.hpp.

◆ E_memberIndex [1/35]

Enumerator
e__allMandatory 
e_alignments 
e_phi_alignments 
e_masks 
e_ka_blocks 
e_search_stats 
e_pssm 
e_simple_results 

Definition at line 104 of file Blas_get_searc_resul_reply_.hpp.

◆ E_memberIndex [2/35]

Enumerator
e__allMandatory 
e_request_id 
e_result_types 

Definition at line 89 of file Blas_get_searc_resul_reque_.hpp.

◆ E_memberIndex [3/35]

Enumerator
e__allMandatory 
e_status 

Definition at line 89 of file Blas_get_searc_statu_reply_.hpp.

◆ E_memberIndex [4/35]

Enumerator
e__allMandatory 
e_request_id 

Definition at line 89 of file Blas_get_searc_statu_reque_.hpp.

◆ E_memberIndex [5/35]

Enumerator
e__allMandatory 
e_request_id 

Definition at line 89 of file Blas_get_searc_strat_reque_.hpp.

◆ E_memberIndex [6/35]

Enumerator
e__allMandatory 
e_query_id 
e_alignments 

Definition at line 95 of file Blast4_alignment_for_query_.hpp.

◆ E_memberIndex [7/35]

Enumerator
e__allMandatory 
e_request 
e_results 
e_messages 

Definition at line 98 of file Blast4_archive_.hpp.

◆ E_memberIndex [8/35]

Enumerator
e__allMandatory 
e_name 
e_type 

Definition at line 90 of file Blast4_database_.hpp.

◆ E_memberIndex [9/35]

Enumerator
e__allMandatory 
e_database 
e_description 
e_last_updated 
e_total_length 
e_num_sequences 
e_seqtech 
e_taxid 
e_extended 

Definition at line 101 of file Blast4_database_info_.hpp.

◆ E_memberIndex [10/35]

Enumerator
e__allMandatory 
e_code 
e_message 

Definition at line 128 of file Blast4_error_.hpp.

◆ E_memberIndex [11/35]

Enumerator
e__allMandatory 
e_queries 

Definition at line 88 of file Blast4_get_queries_reply_.hpp.

◆ E_memberIndex [12/35]

Enumerator
e__allMandatory 
e_database 
e_seq_ids 
e_skip_seq_data 
e_target_only 

Definition at line 97 of file Blast4_get_sequenc_request_.hpp.

◆ E_memberIndex [13/35]

Enumerator
e__allMandatory 
e_lambda 
e_k 
e_h 
e_gapped 

Definition at line 87 of file Blast4_ka_block_.hpp.

◆ E_memberIndex [14/35]

Enumerator
e__allMandatory 
e_locations 
e_frame 

Definition at line 108 of file Blast4_mask_.hpp.

◆ E_memberIndex [15/35]

Enumerator
e__allMandatory 
e_residue_type 
e_name 

Definition at line 90 of file Blast4_matrix_id_.hpp.

◆ E_memberIndex [16/35]

Enumerator
e__allMandatory 
e_name 
e_value 

Definition at line 93 of file Blast4_parameter_.hpp.

◆ E_memberIndex [17/35]

Enumerator
e__allMandatory 
e_name 
e_type 

Definition at line 89 of file Blast4_parameter_info_.hpp.

◆ E_memberIndex [18/35]

Enumerator
e__allMandatory 
e_num_alignments 
e_seq_locs 

Definition at line 93 of file Blast4_phi_alignments_.hpp.

◆ E_memberIndex [19/35]

Enumerator
e__allMandatory 
e_program 
e_services 

Definition at line 90 of file Blast4_program_info_.hpp.

◆ E_memberIndex [20/35]

Enumerator
e__allMandatory 
e_request_id 

Definition at line 88 of file Blast4_queue_search_reply_.hpp.

◆ E_memberIndex [21/35]

Enumerator
e__allMandatory 
e_program 
e_service 
e_queries 
e_subject 
e_paramset 
e_algorithm_options 
e_program_options 
e_format_options 

Definition at line 112 of file Blast4_queue_search_reques_.hpp.

◆ E_memberIndex [22/35]

Enumerator
e__allMandatory 
e_start 
e_end 
e_strand 

Definition at line 87 of file Blast4_range_.hpp.

◆ E_memberIndex [23/35]

Enumerator
e__allMandatory 
e_errors 
e_body 

Definition at line 133 of file Blast4_reply_.hpp.

◆ E_memberIndex [24/35]

Enumerator
e__allMandatory 
e_ident 
e_body 

Definition at line 132 of file Blast4_request_.hpp.

◆ E_memberIndex [25/35]

Enumerator
e__allMandatory 
e_id 
e_data 

Definition at line 92 of file Blast4_seq_part_data_.hpp.

◆ E_memberIndex [26/35]

Enumerator
e__allMandatory 
e_subject_id 
e_e_value 
e_bit_score 
e_num_identities 
e_num_indels 
e_full_query_range 
e_full_subject_range 

Definition at line 99 of file Blast4_simple_alignment_.hpp.

◆ E_memberIndex [27/35]

Enumerator
e__allMandatory 
e_all_alignments 

Definition at line 94 of file Blast4_simple_results_.hpp.

◆ E_memberIndex [28/35]

Enumerator
e__allMandatory 
e_name 
e_documentation 

Definition at line 90 of file Blast4_task_info_.hpp.

◆ E_memberIndex [29/35]

Enumerator
e__allMandatory 
e_program 
e_service 
e_paramset 
e_params 

Definition at line 96 of file Blast_finish_params_reques_.hpp.

◆ E_memberIndex [30/35]

Enumerator
e__allMandatory 
e_params 

Definition at line 88 of file Blast_get_databa_ex_reques_.hpp.

◆ E_memberIndex [31/35]

Enumerator
e__allMandatory 
e_database 
e_program 
e_service 
e_created_by 
e_queries 
e_algorithm_options 
e_program_options 
e_format_options 
e_subjects 

Definition at line 103 of file Blast_get_reque_info_reply_.hpp.

◆ E_memberIndex [32/35]

Enumerator
e__allMandatory 
e_request_id 

Definition at line 89 of file Blast_get_reque_info_reque_.hpp.

◆ E_memberIndex [33/35]

Enumerator
e__allMandatory 
e_request_id 
e_info 

Definition at line 93 of file Blast_get_searc_info_reply_.hpp.

◆ E_memberIndex [34/35]

Enumerator
e__allMandatory 
e_request_id 
e_info 

Definition at line 94 of file Blast_get_searc_info_reque_.hpp.

◆ E_memberIndex [35/35]

Enumerator
e__allMandatory 
e_database 
e_seq_locations 

Definition at line 95 of file Blast_get_seq_parts_reques_.hpp.

◆ EBlast4_error_code

Defines values for use in Blast4-errorcode.

Access to EBlast4_error_code's attributes (values, names) as defined in spec.

Note: warnings should have values greater than 1024 and less than 2048, errors should have values greater than 2048.

Enumerator
eBlast4_error_code_conversion_warning 

A conversion issue was found when converting to/from blast3 from/to blast4 protocol in the blast4 server.

eBlast4_error_code_internal_error 

Indicates internal errors in the blast4 server.

eBlast4_error_code_not_implemented 

Request type is not implemented in the blast4 server.

eBlast4_error_code_not_allowed 

Request type is not allowed in the blast4 server.

eBlast4_error_code_bad_request 

Malformed/invalid requests (e.g.: parsing errors or invalid data in request)

eBlast4_error_code_bad_request_id 

The RID requested is unknown or it has expired.

eBlast4_error_code_search_pending 

The search is pending.

Definition at line 66 of file Blast4_error_code_.hpp.

◆ EBlast4_error_flags

This enumeration defines values that are intended to be used with the Blast4-errorcode in a logical AND operation to easily determine whether a given Blast4-error object contains either a warning or an error.

Access to EBlast4_error_flags's attributes (values, names) as defined in spec.

Enumerator
eBlast4_error_flags_warning 
eBlast4_error_flags_error 

Definition at line 66 of file Blast4_error_flags_.hpp.

◆ EBlast4_frame_type

Access to EBlast4_frame_type's attributes (values, names) as defined in spec.

Enumerator
eBlast4_frame_type_notset 
eBlast4_frame_type_plus1 
eBlast4_frame_type_plus2 
eBlast4_frame_type_plus3 
eBlast4_frame_type_minus1 
eBlast4_frame_type_minus2 
eBlast4_frame_type_minus3 

Definition at line 63 of file Blast4_frame_type_.hpp.

◆ EBlast4_residue_type

Access to EBlast4_residue_type's attributes (values, names) as defined in spec.

Enumerator
eBlast4_residue_type_unknown 
eBlast4_residue_type_protein 
eBlast4_residue_type_nucleotide 

Definition at line 63 of file Blast4_residue_type_.hpp.

◆ EBlast4_result_types

This type allows the specification of what result types are desired.

Access to EBlast4_result_types's attributes (values, names) as defined in spec.

Enumerator
eBlast4_result_types_default 

Default retrieves the following result types (if available): alignments, phi-alignments masks, ka-blocks, search-stats and pssm.

eBlast4_result_types_alignments 
eBlast4_result_types_phi_alignments 
eBlast4_result_types_masks 
eBlast4_result_types_ka_blocks 
eBlast4_result_types_search_stats 
eBlast4_result_types_pssm 
eBlast4_result_types_simple_results 

Definition at line 64 of file Blast4_result_types_.hpp.

◆ EBlast4_seqtech

Borrowed from seq.asn.

Access to EBlast4_seqtech's attributes (values, names) as defined in spec.

Enumerator
eBlast4_seqtech_unknown 
eBlast4_seqtech_standard 

standard sequencing

eBlast4_seqtech_est 

Expressed Sequence Tag.

eBlast4_seqtech_sts 

Sequence Tagged Site.

eBlast4_seqtech_survey 

one-pass genomic sequence

eBlast4_seqtech_genemap 

from genetic mapping techniques

eBlast4_seqtech_physmap 

from physical mapping techniques

eBlast4_seqtech_derived 

derived from other data, not a primary entity

eBlast4_seqtech_concept_trans 

conceptual translation

eBlast4_seqtech_seq_pept 

peptide was sequenced

eBlast4_seqtech_both 

concept transl. w/ partial pept. seq.

eBlast4_seqtech_seq_pept_overlap 

sequenced peptide, ordered by overlap

eBlast4_seqtech_seq_pept_homol 

sequenced peptide, ordered by homology

eBlast4_seqtech_concept_trans_a 

conceptual transl. supplied by author

eBlast4_seqtech_htgs_1 

unordered High Throughput sequence contig

eBlast4_seqtech_htgs_2 

ordered High Throughput sequence contig

eBlast4_seqtech_htgs_3 

finished High Throughput sequence

eBlast4_seqtech_fli_cdna 

full length insert cDNA

eBlast4_seqtech_htgs_0 

single genomic reads for coordination

eBlast4_seqtech_htc 

high throughput cDNA

eBlast4_seqtech_wgs 

whole genome shotgun sequencing

eBlast4_seqtech_other 

use Source.techexp

Definition at line 64 of file Blast4_seqtech_.hpp.

◆ EBlast4_strand_type

Access to EBlast4_strand_type's attributes (values, names) as defined in spec.

Enumerator
eBlast4_strand_type_forward_strand 
eBlast4_strand_type_reverse_strand 
eBlast4_strand_type_both_strands 

Definition at line 63 of file Blast4_strand_type_.hpp.

Function Documentation

◆ Ask() [1/4]

void CBlast4Client_Base::Ask ( const TRequest request,
CBlast4Client_Base::TReply reply 
)
inlinevirtual

◆ Ask() [2/4]

void CBlast4Client_Base::Ask ( const TRequest request,
CBlast4Client_Base::TReply reply,
TReplyChoice::E_Choice  wanted 
)
virtual

◆ Ask() [3/4]

void CBlast4Client_Base::Ask ( const TRequestChoice req,
CBlast4Client_Base::TReply reply 
)
virtual

◆ Ask() [4/4]

void CBlast4Client_Base::Ask ( const TRequestChoice req,
CBlast4Client_Base::TReply reply,
TReplyChoice::E_Choice  wanted 
)
virtual

◆ AskFinish_params()

CRef< CBlast4_finish_params_reply > CBlast4Client_Base::AskFinish_params ( const CBlast4_finish_params_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_databases()

CRef< CBlast4_get_databases_reply > CBlast4Client_Base::AskGet_databases ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskGet_databases_ex()

CRef< CBlast4_get_databases_ex_reply > CBlast4Client_Base::AskGet_databases_ex ( const CBlast4_get_databases_ex_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_matrices()

CRef< CBlast4_get_matrices_reply > CBlast4Client_Base::AskGet_matrices ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskGet_parameters()

CRef< CBlast4_get_parameters_reply > CBlast4Client_Base::AskGet_parameters ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskGet_paramsets()

CRef< CBlast4_get_paramsets_reply > CBlast4Client_Base::AskGet_paramsets ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskGet_programs()

CRef< CBlast4_get_programs_reply > CBlast4Client_Base::AskGet_programs ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskGet_protocol_info()

CRef< CBlast4_get_protocol_info_reply > CBlast4Client_Base::AskGet_protocol_info ( const CBlast4_get_protocol_info_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_request_info()

CRef< CBlast4_get_request_info_reply > CBlast4Client_Base::AskGet_request_info ( const CBlast4_get_request_info_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_search_info()

CRef< CBlast4_get_search_info_reply > CBlast4Client_Base::AskGet_search_info ( const CBlast4_get_search_info_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_search_results()

CRef< CBlast4_get_search_results_reply > CBlast4Client_Base::AskGet_search_results ( const CBlast4_get_search_results_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_sequence_parts()

CRef< CBlast4_get_seq_parts_reply > CBlast4Client_Base::AskGet_sequence_parts ( const CBlast4_get_seq_parts_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_sequences()

CRef< CBlast4_get_sequences_reply > CBlast4Client_Base::AskGet_sequences ( const CBlast4_get_sequences_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ AskGet_windowmasked_taxids()

CRef< CBlast4_get_windowmasked_taxids_reply > CBlast4Client_Base::AskGet_windowmasked_taxids ( CBlast4Client_Base::TReply reply = 0)
virtual

◆ AskQueue_search()

CRef< CBlast4_queue_search_reply > CBlast4Client_Base::AskQueue_search ( const CBlast4_queue_search_request req,
CBlast4Client_Base::TReply reply = 0 
)
virtual

◆ CanGet() [1/10]

bool CBlast4_get_windowmasked_taxids_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 154 of file Blas_get_windo_taxid_reply_.hpp.

◆ CanGet() [2/10]

bool CBlast4_get_databases_ex_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_databa_ex_reply_.hpp.

◆ CanGet() [3/10]

bool CBlast4_get_databases_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_databases_reply_.hpp.

◆ CanGet() [4/10]

bool CBlast4_get_matrices_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_matrices_reply_.hpp.

◆ CanGet() [5/10]

bool CBlast4_get_parameters_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_parameter_reply_.hpp.

◆ CanGet() [6/10]

bool CBlast4_get_paramsets_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 161 of file Blast4_get_paramsets_reply_.hpp.

◆ CanGet() [7/10]

bool CBlast4_get_programs_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_programs_reply_.hpp.

◆ CanGet() [8/10]

bool CBlast4_get_seq_parts_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_seq_parts_reply_.hpp.

◆ CanGet() [9/10]

bool CBlast4_get_sequences_reply_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_get_sequences_reply_.hpp.

◆ CanGet() [10/10]

bool CBlast4_parameters_Base::CanGet ( void  ) const
inline

Check if it is safe to call Get method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 158 of file Blast4_parameters_.hpp.

◆ CanGetAlgorithm_options() [1/2]

bool CBlast4_queue_search_request_Base::CanGetAlgorithm_options ( void  ) const
inline

Check if it is safe to call GetAlgorithm_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 666 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetAlgorithm_options().

Referenced by BOOST_AUTO_TEST_CASE(), CImportStrategy::FetchData(), CImportStrategy::GetAlgoOptions(), and CBlast4_queue_search_request_Base::GetAlgorithm_options().

◆ CanGetAlgorithm_options() [2/2]

bool CBlast4_get_request_info_reply_Base::CanGetAlgorithm_options ( void  ) const
inline

Check if it is safe to call GetAlgorithm_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 695 of file Blast_get_reque_info_reply_.hpp.

◆ CanGetAlignments() [1/2]

bool CBlast4_get_search_results_reply_Base::CanGetAlignments ( void  ) const
inline

Check if it is safe to call GetAlignments method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 398 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::IsSetAlignments().

Referenced by BOOST_AUTO_TEST_CASE(), and CBlast4_get_search_results_reply_Base::GetAlignments().

◆ CanGetAlignments() [2/2]

bool CBlast4_alignments_for_query_Base::CanGetAlignments ( void  ) const
inline

Check if it is safe to call GetAlignments method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 255 of file Blast4_alignment_for_query_.hpp.

◆ CanGetAll_alignments()

bool CBlast4_simple_results_Base::CanGetAll_alignments ( void  ) const
inline

Check if it is safe to call GetAll_alignments method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 164 of file Blast4_simple_results_.hpp.

◆ CanGetBit_score()

bool CBlast4_simple_alignment_Base::CanGetBit_score ( void  ) const
inline

Check if it is safe to call GetBit_score method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 512 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetBit_score().

Referenced by CBlast4_simple_alignment_Base::GetBit_score().

◆ CanGetBody() [1/2]

bool CBlast4_reply_Base::CanGetBody ( void  ) const
inline

Check if it is safe to call GetBody method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 267 of file Blast4_reply_.hpp.

◆ CanGetBody() [2/2]

bool CBlast4_request_Base::CanGetBody ( void  ) const
inline

Check if it is safe to call GetBody method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 298 of file Blast4_request_.hpp.

Referenced by s_BuildArchiveAll().

◆ CanGetCode()

bool CBlast4_error_Base::CanGetCode ( void  ) const
inline

Check if it is safe to call GetCode method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 246 of file Blast4_error_.hpp.

References CBlast4_error_Base::IsSetCode().

Referenced by CBlast4_error_Base::GetCode().

◆ CanGetCreated_by()

bool CBlast4_get_request_info_reply_Base::CanGetCreated_by ( void  ) const
inline

Check if it is safe to call GetCreated_by method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 618 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::IsSetCreated_by().

Referenced by CBlast4_get_request_info_reply_Base::GetCreated_by().

◆ CanGetData()

bool CBlast4_seq_part_data_Base::CanGetData ( void  ) const
inline

Check if it is safe to call GetData method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 239 of file Blast4_seq_part_data_.hpp.

◆ CanGetDatabase() [1/4]

bool CBlast4_database_info_Base::CanGetDatabase ( void  ) const
inline

Check if it is safe to call GetDatabase method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 452 of file Blast4_database_info_.hpp.

◆ CanGetDatabase() [2/4]

bool CBlast4_get_sequences_request_Base::CanGetDatabase ( void  ) const
inline

Check if it is safe to call GetDatabase method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 294 of file Blast4_get_sequenc_request_.hpp.

◆ CanGetDatabase() [3/4]

bool CBlast4_get_request_info_reply_Base::CanGetDatabase ( void  ) const
inline

Check if it is safe to call GetDatabase method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 494 of file Blast_get_reque_info_reply_.hpp.

◆ CanGetDatabase() [4/4]

bool CBlast4_get_seq_parts_request_Base::CanGetDatabase ( void  ) const
inline

Check if it is safe to call GetDatabase method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 210 of file Blast_get_seq_parts_reques_.hpp.

◆ CanGetDescription()

bool CBlast4_database_info_Base::CanGetDescription ( void  ) const
inline

Check if it is safe to call GetDescription method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 482 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetDescription().

Referenced by CBlast4_database_info_Base::GetDescription().

◆ CanGetDocumentation()

bool CBlast4_task_info_Base::CanGetDocumentation ( void  ) const
inline

Check if it is safe to call GetDocumentation method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 256 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::IsSetDocumentation().

Referenced by CBlast4_task_info_Base::GetDocumentation().

◆ CanGetE_value()

bool CBlast4_simple_alignment_Base::CanGetE_value ( void  ) const
inline

Check if it is safe to call GetE_value method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 465 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetE_value().

Referenced by CBlast4_simple_alignment_Base::GetE_value().

◆ CanGetEnd()

bool CBlast4_range_Base::CanGetEnd ( void  ) const
inline

Check if it is safe to call GetEnd method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 290 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetEnd().

Referenced by CBlast4_range_Base::GetEnd().

◆ CanGetErrors()

bool CBlast4_reply_Base::CanGetErrors ( void  ) const
inline

Check if it is safe to call GetErrors method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 242 of file Blast4_reply_.hpp.

◆ CanGetExtended()

bool CBlast4_database_info_Base::CanGetExtended ( void  ) const
inline

Check if it is safe to call GetExtended method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 764 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetExtended().

Referenced by CBlast4_database_info_Base::GetExtended().

◆ CanGetFormat_options() [1/2]

bool CBlast4_queue_search_request_Base::CanGetFormat_options ( void  ) const
inline

Check if it is safe to call GetFormat_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 708 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetFormat_options().

Referenced by CImportStrategy::FetchData(), CBlast4_queue_search_request_Base::GetFormat_options(), and CImportStrategy::GetWebFormatOptions().

◆ CanGetFormat_options() [2/2]

bool CBlast4_get_request_info_reply_Base::CanGetFormat_options ( void  ) const
inline

Check if it is safe to call GetFormat_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 755 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::IsSetFormat_options().

Referenced by CBlast4_get_request_info_reply_Base::GetFormat_options().

◆ CanGetFrame()

bool CBlast4_mask_Base::CanGetFrame ( void  ) const
inline

Check if it is safe to call GetFrame method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 242 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::IsSetFrame().

Referenced by CBlast4_mask_Base::GetFrame().

◆ CanGetFull_query_range()

bool CBlast4_simple_alignment_Base::CanGetFull_query_range ( void  ) const
inline

Check if it is safe to call GetFull_query_range method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 653 of file Blast4_simple_alignment_.hpp.

◆ CanGetFull_subject_range()

bool CBlast4_simple_alignment_Base::CanGetFull_subject_range ( void  ) const
inline

Check if it is safe to call GetFull_subject_range method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 683 of file Blast4_simple_alignment_.hpp.

◆ CanGetGapped()

bool CBlast4_ka_block_Base::CanGetGapped ( void  ) const
inline

Check if it is safe to call GetGapped method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 421 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetGapped().

Referenced by CBlast4_ka_block_Base::GetGapped().

◆ CanGetH()

bool CBlast4_ka_block_Base::CanGetH ( void  ) const
inline

Check if it is safe to call GetH method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 374 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetH().

Referenced by CBlast4_ka_block_Base::GetH().

◆ CanGetId()

bool CBlast4_seq_part_data_Base::CanGetId ( void  ) const
inline

Check if it is safe to call GetId method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 209 of file Blast4_seq_part_data_.hpp.

◆ CanGetIdent()

bool CBlast4_request_Base::CanGetIdent ( void  ) const
inline

Check if it is safe to call GetIdent method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 251 of file Blast4_request_.hpp.

References CBlast4_request_Base::IsSetIdent().

Referenced by CBlast4_request_Base::GetIdent().

◆ CanGetInfo() [1/2]

bool CBlast4_get_search_info_reply_Base::CanGetInfo ( void  ) const
inline

Check if it is safe to call GetInfo method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 256 of file Blast_get_searc_info_reply_.hpp.

References CBlast4_get_search_info_reply_Base::IsSetInfo().

Referenced by CBlast4_get_search_info_reply_Base::GetInfo(), CRemoteBlast::x_GetStringFromSearchInfoReply(), and CRemoteBlast::x_GetSubjects().

◆ CanGetInfo() [2/2]

bool CBlast4_get_search_info_request_Base::CanGetInfo ( void  ) const
inline

Check if it is safe to call GetInfo method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 257 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::IsSetInfo().

Referenced by CBlast4_get_search_info_request_Base::GetInfo().

◆ CanGetK()

bool CBlast4_ka_block_Base::CanGetK ( void  ) const
inline

Check if it is safe to call GetK method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 327 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetK().

Referenced by CBlast4_ka_block_Base::GetK().

◆ CanGetKa_blocks()

bool CBlast4_get_search_results_reply_Base::CanGetKa_blocks ( void  ) const
inline

Check if it is safe to call GetKa_blocks method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 465 of file Blas_get_searc_resul_reply_.hpp.

◆ CanGetLambda()

bool CBlast4_ka_block_Base::CanGetLambda ( void  ) const
inline

Check if it is safe to call GetLambda method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 280 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetLambda().

Referenced by CBlast4_ka_block_Base::GetLambda().

◆ CanGetLast_updated()

bool CBlast4_database_info_Base::CanGetLast_updated ( void  ) const
inline

Check if it is safe to call GetLast_updated method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 529 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetLast_updated().

Referenced by CBlast4_database_info_Base::GetLast_updated().

◆ CanGetLocations()

bool CBlast4_mask_Base::CanGetLocations ( void  ) const
inline

Check if it is safe to call GetLocations method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 217 of file Blast4_mask_.hpp.

◆ CanGetMasks()

bool CBlast4_get_search_results_reply_Base::CanGetMasks ( void  ) const
inline

Check if it is safe to call GetMasks method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 440 of file Blas_get_searc_resul_reply_.hpp.

◆ CanGetMessage()

bool CBlast4_error_Base::CanGetMessage ( void  ) const
inline

Check if it is safe to call GetMessage method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 293 of file Blast4_error_.hpp.

References CBlast4_error_Base::IsSetMessage().

Referenced by CBlast4_error_Base::GetMessage().

◆ CanGetMessages()

bool CBlast4_archive_Base::CanGetMessages ( void  ) const
inline

Check if it is safe to call GetMessages method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 308 of file Blast4_archive_.hpp.

◆ CanGetName() [1/5]

bool CBlast4_database_Base::CanGetName ( void  ) const
inline

Check if it is safe to call GetName method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 206 of file Blast4_database_.hpp.

References CBlast4_database_Base::IsSetName().

Referenced by CBlast4_database_Base::GetName().

◆ CanGetName() [2/5]

bool CBlast4_matrix_id_Base::CanGetName ( void  ) const
inline

Check if it is safe to call GetName method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 253 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::IsSetName().

Referenced by CBlast4_matrix_id_Base::GetName().

◆ CanGetName() [3/5]

bool CBlast4_parameter_Base::CanGetName ( void  ) const
inline

Check if it is safe to call GetName method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 209 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::IsSetName().

Referenced by CBlast4_parameter_Base::GetName(), and CBlast4Field::Match().

◆ CanGetName() [4/5]

bool CBlast4_parameter_info_Base::CanGetName ( void  ) const
inline

Check if it is safe to call GetName method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 206 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::IsSetName().

Referenced by CBlast4_parameter_info_Base::GetName().

◆ CanGetName() [5/5]

bool CBlast4_task_info_Base::CanGetName ( void  ) const
inline

Check if it is safe to call GetName method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 209 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::IsSetName().

Referenced by CBlast4_task_info_Base::GetName().

◆ CanGetNum_alignments()

bool CBlast4_phi_alignments_Base::CanGetNum_alignments ( void  ) const
inline

Check if it is safe to call GetNum_alignments method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 202 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::IsSetNum_alignments().

Referenced by CBlast4_phi_alignments_Base::GetNum_alignments().

◆ CanGetNum_identities()

bool CBlast4_simple_alignment_Base::CanGetNum_identities ( void  ) const
inline

Check if it is safe to call GetNum_identities method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 559 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetNum_identities().

Referenced by CBlast4_simple_alignment_Base::GetNum_identities().

◆ CanGetNum_indels()

bool CBlast4_simple_alignment_Base::CanGetNum_indels ( void  ) const
inline

Check if it is safe to call GetNum_indels method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 606 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetNum_indels().

Referenced by CBlast4_simple_alignment_Base::GetNum_indels().

◆ CanGetNum_sequences()

bool CBlast4_database_info_Base::CanGetNum_sequences ( void  ) const
inline

Check if it is safe to call GetNum_sequences method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 623 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetNum_sequences().

Referenced by CBlast4_database_info_Base::GetNum_sequences().

◆ CanGetParams() [1/2]

bool CBlast4_finish_params_request_Base::CanGetParams ( void  ) const
inline

Check if it is safe to call GetParams method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 433 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::IsSetParams().

Referenced by CBlast4_finish_params_request_Base::GetParams().

◆ CanGetParams() [2/2]

bool CBlast4_get_databases_ex_request_Base::CanGetParams ( void  ) const
inline

Check if it is safe to call GetParams method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 164 of file Blast_get_databa_ex_reques_.hpp.

References CBlast4_get_databases_ex_request_Base::IsSetParams().

Referenced by CBlast4_get_databases_ex_request_Base::GetParams().

◆ CanGetParamset() [1/2]

bool CBlast4_queue_search_request_Base::CanGetParamset ( void  ) const
inline

Check if it is safe to call GetParamset method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 619 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetParamset().

Referenced by CBlast4_queue_search_request_Base::GetParamset().

◆ CanGetParamset() [2/2]

bool CBlast4_finish_params_request_Base::CanGetParamset ( void  ) const
inline

Check if it is safe to call GetParamset method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 386 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::IsSetParamset().

Referenced by CBlast4_finish_params_request_Base::GetParamset().

◆ CanGetPhi_alignments()

bool CBlast4_get_search_results_reply_Base::CanGetPhi_alignments ( void  ) const
inline

Check if it is safe to call GetPhi_alignments method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 419 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::IsSetPhi_alignments().

Referenced by CBlast4_get_search_results_reply_Base::GetPhi_alignments().

◆ CanGetProgram() [1/4]

bool CBlast4_program_info_Base::CanGetProgram ( void  ) const
inline

Check if it is safe to call GetProgram method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 200 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::IsSetProgram().

Referenced by CBlast4_program_info_Base::GetProgram().

◆ CanGetProgram() [2/4]

bool CBlast4_queue_search_request_Base::CanGetProgram ( void  ) const
inline

Check if it is safe to call GetProgram method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 465 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetProgram().

Referenced by CBlast4_queue_search_request_Base::GetProgram().

◆ CanGetProgram() [3/4]

bool CBlast4_finish_params_request_Base::CanGetProgram ( void  ) const
inline

Check if it is safe to call GetProgram method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 292 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::IsSetProgram().

Referenced by CBlast4_finish_params_request_Base::GetProgram().

◆ CanGetProgram() [4/4]

bool CBlast4_get_request_info_reply_Base::CanGetProgram ( void  ) const
inline

Check if it is safe to call GetProgram method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 524 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::IsSetProgram().

Referenced by CBlast4_get_request_info_reply_Base::GetProgram().

◆ CanGetProgram_options() [1/2]

bool CBlast4_queue_search_request_Base::CanGetProgram_options ( void  ) const
inline

Check if it is safe to call GetProgram_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 687 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetProgram_options().

Referenced by BOOST_AUTO_TEST_CASE(), CImportStrategy::FetchData(), CBlast4_queue_search_request_Base::GetProgram_options(), and CImportStrategy::GetProgramOptions().

◆ CanGetProgram_options() [2/2]

bool CBlast4_get_request_info_reply_Base::CanGetProgram_options ( void  ) const
inline

Check if it is safe to call GetProgram_options method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 725 of file Blast_get_reque_info_reply_.hpp.

◆ CanGetPssm()

bool CBlast4_get_search_results_reply_Base::CanGetPssm ( void  ) const
inline

Check if it is safe to call GetPssm method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 515 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::IsSetPssm().

Referenced by CBlast4_get_search_results_reply_Base::GetPssm().

◆ CanGetQueries() [1/3]

bool CBlast4_get_queries_reply_Base::CanGetQueries ( void  ) const
inline

Check if it is safe to call GetQueries method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 164 of file Blast4_get_queries_reply_.hpp.

◆ CanGetQueries() [2/3]

bool CBlast4_queue_search_request_Base::CanGetQueries ( void  ) const
inline

Check if it is safe to call GetQueries method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 559 of file Blast4_queue_search_reques_.hpp.

Referenced by BOOST_AUTO_TEST_CASE().

◆ CanGetQueries() [3/3]

bool CBlast4_get_request_info_reply_Base::CanGetQueries ( void  ) const
inline

Check if it is safe to call GetQueries method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 665 of file Blast_get_reque_info_reply_.hpp.

◆ CanGetQuery_id()

bool CBlast4_alignments_for_query_Base::CanGetQuery_id ( void  ) const
inline

Check if it is safe to call GetQuery_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 208 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::IsSetQuery_id().

Referenced by CBlast4_alignments_for_query_Base::GetQuery_id().

◆ CanGetRequest()

bool CBlast4_archive_Base::CanGetRequest ( void  ) const
inline

Check if it is safe to call GetRequest method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 248 of file Blast4_archive_.hpp.

◆ CanGetRequest_id() [1/7]

bool CBlast4_get_search_results_request_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 207 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::IsSetRequest_id().

Referenced by CBlast4_get_search_results_request_Base::GetRequest_id().

◆ CanGetRequest_id() [2/7]

bool CBlast4_get_search_status_request_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 166 of file Blas_get_searc_statu_reque_.hpp.

References CBlast4_get_search_status_request_Base::IsSetRequest_id().

Referenced by CBlast4_get_search_status_request_Base::GetRequest_id().

◆ CanGetRequest_id() [3/7]

bool CBlast4_get_search_strategy_request_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 166 of file Blas_get_searc_strat_reque_.hpp.

References CBlast4_get_search_strategy_request_Base::IsSetRequest_id().

Referenced by CBlast4_get_search_strategy_request_Base::GetRequest_id().

◆ CanGetRequest_id() [4/7]

bool CBlast4_queue_search_reply_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 165 of file Blast4_queue_search_reply_.hpp.

References CBlast4_queue_search_reply_Base::IsSetRequest_id().

Referenced by CBlast4_queue_search_reply_Base::GetRequest_id().

◆ CanGetRequest_id() [5/7]

bool CBlast4_get_request_info_request_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 166 of file Blast_get_reque_info_reque_.hpp.

References CBlast4_get_request_info_request_Base::IsSetRequest_id().

Referenced by CBlast4_get_request_info_request_Base::GetRequest_id().

◆ CanGetRequest_id() [6/7]

bool CBlast4_get_search_info_reply_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 209 of file Blast_get_searc_info_reply_.hpp.

References CBlast4_get_search_info_reply_Base::IsSetRequest_id().

Referenced by CBlast4_get_search_info_reply_Base::GetRequest_id(), CRemoteBlast::x_GetStringFromSearchInfoReply(), and CRemoteBlast::x_GetSubjects().

◆ CanGetRequest_id() [7/7]

bool CBlast4_get_search_info_request_Base::CanGetRequest_id ( void  ) const
inline

Check if it is safe to call GetRequest_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 210 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::IsSetRequest_id().

Referenced by CBlast4_get_search_info_request_Base::GetRequest_id().

◆ CanGetResidue_type()

bool CBlast4_matrix_id_Base::CanGetResidue_type ( void  ) const
inline

Check if it is safe to call GetResidue_type method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 206 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::IsSetResidue_type().

Referenced by CBlast4_matrix_id_Base::GetResidue_type().

◆ CanGetResult_types()

bool CBlast4_get_search_results_request_Base::CanGetResult_types ( void  ) const
inline

Check if it is safe to call GetResult_types method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 254 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::IsSetResult_types().

Referenced by CBlast4_get_search_results_request_Base::GetResult_types().

◆ CanGetResults()

bool CBlast4_archive_Base::CanGetResults ( void  ) const
inline

Check if it is safe to call GetResults method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 278 of file Blast4_archive_.hpp.

◆ CanGetSearch_stats()

bool CBlast4_get_search_results_reply_Base::CanGetSearch_stats ( void  ) const
inline

Check if it is safe to call GetSearch_stats method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 490 of file Blas_get_searc_resul_reply_.hpp.

◆ CanGetSeq_ids()

bool CBlast4_get_sequences_request_Base::CanGetSeq_ids ( void  ) const
inline

Check if it is safe to call GetSeq_ids method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 324 of file Blast4_get_sequenc_request_.hpp.

◆ CanGetSeq_locations()

bool CBlast4_get_seq_parts_request_Base::CanGetSeq_locations ( void  ) const
inline

Check if it is safe to call GetSeq_locations method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 240 of file Blast_get_seq_parts_reques_.hpp.

◆ CanGetSeq_locs()

bool CBlast4_phi_alignments_Base::CanGetSeq_locs ( void  ) const
inline

Check if it is safe to call GetSeq_locs method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 249 of file Blast4_phi_alignments_.hpp.

◆ CanGetSeqtech()

bool CBlast4_database_info_Base::CanGetSeqtech ( void  ) const
inline

Check if it is safe to call GetSeqtech method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 670 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetSeqtech().

Referenced by CBlast4_database_info_Base::GetSeqtech().

◆ CanGetService() [1/3]

bool CBlast4_queue_search_request_Base::CanGetService ( void  ) const
inline

Check if it is safe to call GetService method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 512 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::IsSetService().

Referenced by CBlast4_queue_search_request_Base::GetService().

◆ CanGetService() [2/3]

bool CBlast4_finish_params_request_Base::CanGetService ( void  ) const
inline

Check if it is safe to call GetService method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 339 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::IsSetService().

Referenced by CBlast4_finish_params_request_Base::GetService().

◆ CanGetService() [3/3]

bool CBlast4_get_request_info_reply_Base::CanGetService ( void  ) const
inline

Check if it is safe to call GetService method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 571 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::IsSetService().

Referenced by CBlast4_get_request_info_reply_Base::GetService().

◆ CanGetServices()

bool CBlast4_program_info_Base::CanGetServices ( void  ) const
inline

Check if it is safe to call GetServices method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 247 of file Blast4_program_info_.hpp.

◆ CanGetSimple_results()

bool CBlast4_get_search_results_reply_Base::CanGetSimple_results ( void  ) const
inline

Check if it is safe to call GetSimple_results method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 536 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::IsSetSimple_results().

Referenced by CBlast4_get_search_results_reply_Base::GetSimple_results().

◆ CanGetSkip_seq_data()

bool CBlast4_get_sequences_request_Base::CanGetSkip_seq_data ( void  ) const
inline

Check if it is safe to call GetSkip_seq_data method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 349 of file Blast4_get_sequenc_request_.hpp.

◆ CanGetStart()

bool CBlast4_range_Base::CanGetStart ( void  ) const
inline

Check if it is safe to call GetStart method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 243 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetStart().

Referenced by CBlast4_range_Base::GetStart().

◆ CanGetStatus()

bool CBlast4_get_search_status_reply_Base::CanGetStatus ( void  ) const
inline

Check if it is safe to call GetStatus method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 166 of file Blas_get_searc_statu_reply_.hpp.

References CBlast4_get_search_status_reply_Base::IsSetStatus().

Referenced by CBlast4_get_search_status_reply_Base::GetStatus().

◆ CanGetStrand()

bool CBlast4_range_Base::CanGetStrand ( void  ) const
inline

Check if it is safe to call GetStrand method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 337 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetStrand().

Referenced by CBlast4_range_Base::GetStrand().

◆ CanGetSubject()

bool CBlast4_queue_search_request_Base::CanGetSubject ( void  ) const
inline

Check if it is safe to call GetSubject method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 589 of file Blast4_queue_search_reques_.hpp.

Referenced by BOOST_AUTO_TEST_CASE().

◆ CanGetSubject_id()

bool CBlast4_simple_alignment_Base::CanGetSubject_id ( void  ) const
inline

Check if it is safe to call GetSubject_id method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 418 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetSubject_id().

Referenced by CBlast4_simple_alignment_Base::GetSubject_id().

◆ CanGetSubjects()

bool CBlast4_get_request_info_reply_Base::CanGetSubjects ( void  ) const
inline

Check if it is safe to call GetSubjects method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 776 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::IsSetSubjects().

Referenced by CBlast4_get_request_info_reply_Base::GetSubjects().

◆ CanGetTarget_only()

bool CBlast4_get_sequences_request_Base::CanGetTarget_only ( void  ) const
inline

Check if it is safe to call GetTarget_only method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 399 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::IsSetTarget_only().

Referenced by CBlast4_get_sequences_request_Base::GetTarget_only().

◆ CanGetTaxid()

bool CBlast4_database_info_Base::CanGetTaxid ( void  ) const
inline

Check if it is safe to call GetTaxid method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 717 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetTaxid().

Referenced by CBlast4_database_info_Base::GetTaxid().

◆ CanGetTotal_length()

bool CBlast4_database_info_Base::CanGetTotal_length ( void  ) const
inline

Check if it is safe to call GetTotal_length method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 576 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetTotal_length().

Referenced by CBlast4_database_info_Base::GetTotal_length().

◆ CanGetType() [1/2]

bool CBlast4_database_Base::CanGetType ( void  ) const
inline

Check if it is safe to call GetType method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 253 of file Blast4_database_.hpp.

References CBlast4_database_Base::IsSetType().

Referenced by CBlast4_database_Base::GetType().

◆ CanGetType() [2/2]

bool CBlast4_parameter_info_Base::CanGetType ( void  ) const
inline

Check if it is safe to call GetType method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 253 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::IsSetType().

Referenced by CBlast4_parameter_info_Base::GetType().

◆ CanGetValue()

bool CBlast4_parameter_Base::CanGetValue ( void  ) const
inline

Check if it is safe to call GetValue method.

Returns
  • true, if the data member is getatable.
  • false, otherwise.

Definition at line 256 of file Blast4_parameter_.hpp.

Referenced by CBlast4Field::Match().

◆ CBlast4_alignments_for_query() [1/2]

CBlast4_alignments_for_query::CBlast4_alignments_for_query ( const CBlast4_alignments_for_query value)
private

◆ CBlast4_alignments_for_query() [2/2]

CBlast4_alignments_for_query::CBlast4_alignments_for_query ( void  )
inline

Definition at line 86 of file Blast4_alignment_for_query.hpp.

◆ CBlast4_alignments_for_query_Base() [1/2]

CBlast4_alignments_for_query_Base::CBlast4_alignments_for_query_Base ( const CBlast4_alignments_for_query_Base )
private

◆ CBlast4_alignments_for_query_Base() [2/2]

END_CLASS_INFO CBlast4_alignments_for_query_Base::CBlast4_alignments_for_query_Base ( void  )

◆ CBlast4_archive() [1/2]

CBlast4_archive::CBlast4_archive ( const CBlast4_archive value)
private

◆ CBlast4_archive() [2/2]

CBlast4_archive::CBlast4_archive ( void  )
inline

Definition at line 86 of file Blast4_archive.hpp.

◆ CBlast4_archive_Base() [1/2]

CBlast4_archive_Base::CBlast4_archive_Base ( const CBlast4_archive_Base )
private

◆ CBlast4_archive_Base() [2/2]

END_CLASS_INFO CBlast4_archive_Base::CBlast4_archive_Base ( void  )

◆ CBlast4_cutoff() [1/2]

CBlast4_cutoff::CBlast4_cutoff ( const CBlast4_cutoff value)
private

◆ CBlast4_cutoff() [2/2]

CBlast4_cutoff::CBlast4_cutoff ( void  )
inline

Definition at line 86 of file Blast4_cutoff.hpp.

◆ CBlast4_cutoff_Base() [1/2]

CBlast4_cutoff_Base::CBlast4_cutoff_Base ( const CBlast4_cutoff_Base )
private

◆ CBlast4_cutoff_Base() [2/2]

END_CHOICE_INFO CBlast4_cutoff_Base::CBlast4_cutoff_Base ( void  )

Definition at line 106 of file Blast4_cutoff_.cpp.

◆ CBlast4_database_Base() [1/2]

CBlast4_database_Base::CBlast4_database_Base ( const CBlast4_database_Base )
private

◆ CBlast4_database_Base() [2/2]

END_CLASS_INFO CBlast4_database_Base::CBlast4_database_Base ( void  )

Definition at line 74 of file Blast4_database_.cpp.

References CBlast4_database_Base::m_set_State.

◆ CBlast4_database_info() [1/2]

CBlast4_database_info::CBlast4_database_info ( const CBlast4_database_info value)
private

◆ CBlast4_database_info() [2/2]

CBlast4_database_info::CBlast4_database_info ( void  )
inline

Definition at line 86 of file Blast4_database_info.hpp.

◆ CBlast4_database_info_Base() [1/2]

CBlast4_database_info_Base::CBlast4_database_info_Base ( const CBlast4_database_info_Base )
private

◆ CBlast4_database_info_Base() [2/2]

END_CLASS_INFO CBlast4_database_info_Base::CBlast4_database_info_Base ( void  )

◆ CBlast4_error() [1/2]

CBlast4_error::CBlast4_error ( const CBlast4_error value)
private

◆ CBlast4_error() [2/2]

CBlast4_error::CBlast4_error ( void  )
inline

Definition at line 86 of file Blast4_error.hpp.

◆ CBlast4_error_Base() [1/2]

CBlast4_error_Base::CBlast4_error_Base ( const CBlast4_error_Base )
private

◆ CBlast4_error_Base() [2/2]

END_CLASS_INFO CBlast4_error_Base::CBlast4_error_Base ( void  )

Definition at line 74 of file Blast4_error_.cpp.

References CBlast4_error_Base::m_set_State.

◆ CBlast4_finish_params_reply()

CBlast4_finish_params_reply::CBlast4_finish_params_reply ( void  )
inline

Definition at line 69 of file Blast4_finish_params_reply.hpp.

◆ CBlast4_finish_params_reply_Base()

CBlast4_finish_params_reply_Base::CBlast4_finish_params_reply_Base ( void  )
inline

Definition at line 96 of file Blast4_finish_params_reply_.hpp.

◆ CBlast4_finish_params_request() [1/2]

CBlast4_finish_params_request::CBlast4_finish_params_request ( const CBlast4_finish_params_request value)
private

◆ CBlast4_finish_params_request() [2/2]

CBlast4_finish_params_request::CBlast4_finish_params_request ( void  )
inline

Definition at line 86 of file Blast_finish_params_reques.hpp.

◆ CBlast4_finish_params_request_Base() [1/2]

CBlast4_finish_params_request_Base::CBlast4_finish_params_request_Base ( const CBlast4_finish_params_request_Base )
private

◆ CBlast4_finish_params_request_Base() [2/2]

END_CLASS_INFO CBlast4_finish_params_request_Base::CBlast4_finish_params_request_Base ( void  )

◆ CBlast4_get_databases_ex_reply() [1/2]

CBlast4_get_databases_ex_reply::CBlast4_get_databases_ex_reply ( const CBlast4_get_databases_ex_reply value)
private

◆ CBlast4_get_databases_ex_reply() [2/2]

CBlast4_get_databases_ex_reply::CBlast4_get_databases_ex_reply ( void  )
inline

Definition at line 86 of file Blast4_get_databa_ex_reply.hpp.

◆ CBlast4_get_databases_ex_reply_Base() [1/2]

CBlast4_get_databases_ex_reply_Base::CBlast4_get_databases_ex_reply_Base ( const CBlast4_get_databases_ex_reply_Base )
private

◆ CBlast4_get_databases_ex_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_databases_ex_reply_Base::CBlast4_get_databases_ex_reply_Base ( void  )

◆ CBlast4_get_databases_ex_request() [1/2]

CBlast4_get_databases_ex_request::CBlast4_get_databases_ex_request ( const CBlast4_get_databases_ex_request value)
private

◆ CBlast4_get_databases_ex_request() [2/2]

CBlast4_get_databases_ex_request::CBlast4_get_databases_ex_request ( void  )
inline

Definition at line 86 of file Blast_get_databa_ex_reques.hpp.

◆ CBlast4_get_databases_ex_request_Base() [1/2]

CBlast4_get_databases_ex_request_Base::CBlast4_get_databases_ex_request_Base ( const CBlast4_get_databases_ex_request_Base )
private

◆ CBlast4_get_databases_ex_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_databases_ex_request_Base::CBlast4_get_databases_ex_request_Base ( void  )

◆ CBlast4_get_databases_reply() [1/2]

CBlast4_get_databases_reply::CBlast4_get_databases_reply ( const CBlast4_get_databases_reply value)
private

◆ CBlast4_get_databases_reply() [2/2]

CBlast4_get_databases_reply::CBlast4_get_databases_reply ( void  )
inline

Definition at line 86 of file Blast4_get_databases_reply.hpp.

◆ CBlast4_get_databases_reply_Base() [1/2]

CBlast4_get_databases_reply_Base::CBlast4_get_databases_reply_Base ( const CBlast4_get_databases_reply_Base )
private

◆ CBlast4_get_databases_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_databases_reply_Base::CBlast4_get_databases_reply_Base ( void  )

◆ CBlast4_get_matrices_reply() [1/2]

CBlast4_get_matrices_reply::CBlast4_get_matrices_reply ( const CBlast4_get_matrices_reply value)
private

◆ CBlast4_get_matrices_reply() [2/2]

CBlast4_get_matrices_reply::CBlast4_get_matrices_reply ( void  )
inline

Definition at line 86 of file Blast4_get_matrices_reply.hpp.

◆ CBlast4_get_matrices_reply_Base() [1/2]

CBlast4_get_matrices_reply_Base::CBlast4_get_matrices_reply_Base ( const CBlast4_get_matrices_reply_Base )
private

◆ CBlast4_get_matrices_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_matrices_reply_Base::CBlast4_get_matrices_reply_Base ( void  )

◆ CBlast4_get_parameters_reply() [1/2]

CBlast4_get_parameters_reply::CBlast4_get_parameters_reply ( const CBlast4_get_parameters_reply value)
private

◆ CBlast4_get_parameters_reply() [2/2]

CBlast4_get_parameters_reply::CBlast4_get_parameters_reply ( void  )
inline

Definition at line 86 of file Blast4_get_parameter_reply.hpp.

◆ CBlast4_get_parameters_reply_Base() [1/2]

CBlast4_get_parameters_reply_Base::CBlast4_get_parameters_reply_Base ( const CBlast4_get_parameters_reply_Base )
private

◆ CBlast4_get_parameters_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_parameters_reply_Base::CBlast4_get_parameters_reply_Base ( void  )

◆ CBlast4_get_paramsets_reply() [1/2]

CBlast4_get_paramsets_reply::CBlast4_get_paramsets_reply ( const CBlast4_get_paramsets_reply value)
private

◆ CBlast4_get_paramsets_reply() [2/2]

CBlast4_get_paramsets_reply::CBlast4_get_paramsets_reply ( void  )
inline

Definition at line 86 of file Blast4_get_paramsets_reply.hpp.

◆ CBlast4_get_paramsets_reply_Base() [1/2]

CBlast4_get_paramsets_reply_Base::CBlast4_get_paramsets_reply_Base ( const CBlast4_get_paramsets_reply_Base )
private

◆ CBlast4_get_paramsets_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_paramsets_reply_Base::CBlast4_get_paramsets_reply_Base ( void  )

◆ CBlast4_get_programs_reply() [1/2]

CBlast4_get_programs_reply::CBlast4_get_programs_reply ( const CBlast4_get_programs_reply value)
private

◆ CBlast4_get_programs_reply() [2/2]

CBlast4_get_programs_reply::CBlast4_get_programs_reply ( void  )
inline

Definition at line 86 of file Blast4_get_programs_reply.hpp.

◆ CBlast4_get_programs_reply_Base() [1/2]

CBlast4_get_programs_reply_Base::CBlast4_get_programs_reply_Base ( const CBlast4_get_programs_reply_Base )
private

◆ CBlast4_get_programs_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_programs_reply_Base::CBlast4_get_programs_reply_Base ( void  )

◆ CBlast4_get_protocol_info_reply()

CBlast4_get_protocol_info_reply::CBlast4_get_protocol_info_reply ( void  )
inline

Definition at line 69 of file Blast_get_proto_info_reply.hpp.

◆ CBlast4_get_protocol_info_reply_Base()

CBlast4_get_protocol_info_reply_Base::CBlast4_get_protocol_info_reply_Base ( void  )
inline

Definition at line 96 of file Blast_get_proto_info_reply_.hpp.

◆ CBlast4_get_protocol_info_request()

CBlast4_get_protocol_info_request::CBlast4_get_protocol_info_request ( void  )
inline

Definition at line 69 of file Blast_get_proto_info_reque.hpp.

◆ CBlast4_get_protocol_info_request_Base()

CBlast4_get_protocol_info_request_Base::CBlast4_get_protocol_info_request_Base ( void  )
inline

Definition at line 97 of file Blast_get_proto_info_reque_.hpp.

◆ CBlast4_get_queries_reply() [1/2]

CBlast4_get_queries_reply::CBlast4_get_queries_reply ( const CBlast4_get_queries_reply value)
private

◆ CBlast4_get_queries_reply() [2/2]

CBlast4_get_queries_reply::CBlast4_get_queries_reply ( void  )
inline

Definition at line 86 of file Blast4_get_queries_reply.hpp.

◆ CBlast4_get_queries_reply_Base() [1/2]

CBlast4_get_queries_reply_Base::CBlast4_get_queries_reply_Base ( const CBlast4_get_queries_reply_Base )
private

◆ CBlast4_get_queries_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_queries_reply_Base::CBlast4_get_queries_reply_Base ( void  )

◆ CBlast4_get_request_info_reply() [1/2]

CBlast4_get_request_info_reply::CBlast4_get_request_info_reply ( const CBlast4_get_request_info_reply value)
private

◆ CBlast4_get_request_info_reply() [2/2]

CBlast4_get_request_info_reply::CBlast4_get_request_info_reply ( void  )
inline

Definition at line 86 of file Blast_get_reque_info_reply.hpp.

◆ CBlast4_get_request_info_reply_Base() [1/2]

CBlast4_get_request_info_reply_Base::CBlast4_get_request_info_reply_Base ( const CBlast4_get_request_info_reply_Base )
private

◆ CBlast4_get_request_info_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_request_info_reply_Base::CBlast4_get_request_info_reply_Base ( void  )

◆ CBlast4_get_request_info_request() [1/2]

CBlast4_get_request_info_request::CBlast4_get_request_info_request ( const CBlast4_get_request_info_request value)
private

◆ CBlast4_get_request_info_request() [2/2]

CBlast4_get_request_info_request::CBlast4_get_request_info_request ( void  )
inline

Definition at line 86 of file Blast_get_reque_info_reque.hpp.

◆ CBlast4_get_request_info_request_Base() [1/2]

CBlast4_get_request_info_request_Base::CBlast4_get_request_info_request_Base ( const CBlast4_get_request_info_request_Base )
private

◆ CBlast4_get_request_info_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_request_info_request_Base::CBlast4_get_request_info_request_Base ( void  )

◆ CBlast4_get_search_info_reply() [1/2]

CBlast4_get_search_info_reply::CBlast4_get_search_info_reply ( const CBlast4_get_search_info_reply value)
private

◆ CBlast4_get_search_info_reply() [2/2]

CBlast4_get_search_info_reply::CBlast4_get_search_info_reply ( void  )
inline

Definition at line 86 of file Blast_get_searc_info_reply.hpp.

◆ CBlast4_get_search_info_reply_Base() [1/2]

CBlast4_get_search_info_reply_Base::CBlast4_get_search_info_reply_Base ( const CBlast4_get_search_info_reply_Base )
private

◆ CBlast4_get_search_info_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_info_reply_Base::CBlast4_get_search_info_reply_Base ( void  )

◆ CBlast4_get_search_info_request() [1/2]

CBlast4_get_search_info_request::CBlast4_get_search_info_request ( const CBlast4_get_search_info_request value)
private

◆ CBlast4_get_search_info_request() [2/2]

CBlast4_get_search_info_request::CBlast4_get_search_info_request ( void  )
inline

Definition at line 86 of file Blast_get_searc_info_reque.hpp.

◆ CBlast4_get_search_info_request_Base() [1/2]

CBlast4_get_search_info_request_Base::CBlast4_get_search_info_request_Base ( const CBlast4_get_search_info_request_Base )
private

◆ CBlast4_get_search_info_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_info_request_Base::CBlast4_get_search_info_request_Base ( void  )

◆ CBlast4_get_search_results_reply() [1/2]

CBlast4_get_search_results_reply::CBlast4_get_search_results_reply ( const CBlast4_get_search_results_reply value)
private

◆ CBlast4_get_search_results_reply() [2/2]

CBlast4_get_search_results_reply::CBlast4_get_search_results_reply ( void  )
inline

Definition at line 86 of file Blas_get_searc_resul_reply.hpp.

◆ CBlast4_get_search_results_reply_Base() [1/2]

CBlast4_get_search_results_reply_Base::CBlast4_get_search_results_reply_Base ( const CBlast4_get_search_results_reply_Base )
private

◆ CBlast4_get_search_results_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_results_reply_Base::CBlast4_get_search_results_reply_Base ( void  )

◆ CBlast4_get_search_results_request() [1/2]

CBlast4_get_search_results_request::CBlast4_get_search_results_request ( const CBlast4_get_search_results_request value)
private

◆ CBlast4_get_search_results_request() [2/2]

CBlast4_get_search_results_request::CBlast4_get_search_results_request ( void  )
inline

Definition at line 86 of file Blas_get_searc_resul_reque.hpp.

◆ CBlast4_get_search_results_request_Base() [1/2]

CBlast4_get_search_results_request_Base::CBlast4_get_search_results_request_Base ( const CBlast4_get_search_results_request_Base )
private

◆ CBlast4_get_search_results_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_results_request_Base::CBlast4_get_search_results_request_Base ( void  )

◆ CBlast4_get_search_status_reply() [1/2]

CBlast4_get_search_status_reply::CBlast4_get_search_status_reply ( const CBlast4_get_search_status_reply value)
private

◆ CBlast4_get_search_status_reply() [2/2]

CBlast4_get_search_status_reply::CBlast4_get_search_status_reply ( void  )
inline

Definition at line 86 of file Blas_get_searc_statu_reply.hpp.

◆ CBlast4_get_search_status_reply_Base() [1/2]

CBlast4_get_search_status_reply_Base::CBlast4_get_search_status_reply_Base ( const CBlast4_get_search_status_reply_Base )
private

◆ CBlast4_get_search_status_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_status_reply_Base::CBlast4_get_search_status_reply_Base ( void  )

◆ CBlast4_get_search_status_request() [1/2]

CBlast4_get_search_status_request::CBlast4_get_search_status_request ( const CBlast4_get_search_status_request value)
private

◆ CBlast4_get_search_status_request() [2/2]

CBlast4_get_search_status_request::CBlast4_get_search_status_request ( void  )
inline

Definition at line 86 of file Blas_get_searc_statu_reque.hpp.

◆ CBlast4_get_search_status_request_Base() [1/2]

CBlast4_get_search_status_request_Base::CBlast4_get_search_status_request_Base ( const CBlast4_get_search_status_request_Base )
private

◆ CBlast4_get_search_status_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_status_request_Base::CBlast4_get_search_status_request_Base ( void  )

◆ CBlast4_get_search_strategy_reply()

CBlast4_get_search_strategy_reply::CBlast4_get_search_strategy_reply ( void  )
inline

Definition at line 69 of file Blas_get_searc_strat_reply.hpp.

◆ CBlast4_get_search_strategy_reply_Base()

CBlast4_get_search_strategy_reply_Base::CBlast4_get_search_strategy_reply_Base ( void  )
inline

Definition at line 98 of file Blas_get_searc_strat_reply_.hpp.

◆ CBlast4_get_search_strategy_request() [1/2]

CBlast4_get_search_strategy_request::CBlast4_get_search_strategy_request ( const CBlast4_get_search_strategy_request value)
private

◆ CBlast4_get_search_strategy_request() [2/2]

CBlast4_get_search_strategy_request::CBlast4_get_search_strategy_request ( void  )
inline

Definition at line 86 of file Blas_get_searc_strat_reque.hpp.

◆ CBlast4_get_search_strategy_request_Base() [1/2]

CBlast4_get_search_strategy_request_Base::CBlast4_get_search_strategy_request_Base ( const CBlast4_get_search_strategy_request_Base )
private

◆ CBlast4_get_search_strategy_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_search_strategy_request_Base::CBlast4_get_search_strategy_request_Base ( void  )

◆ CBlast4_get_seq_parts_reply() [1/2]

CBlast4_get_seq_parts_reply::CBlast4_get_seq_parts_reply ( const CBlast4_get_seq_parts_reply value)
private

◆ CBlast4_get_seq_parts_reply() [2/2]

CBlast4_get_seq_parts_reply::CBlast4_get_seq_parts_reply ( void  )
inline

Definition at line 86 of file Blast4_get_seq_parts_reply.hpp.

◆ CBlast4_get_seq_parts_reply_Base() [1/2]

CBlast4_get_seq_parts_reply_Base::CBlast4_get_seq_parts_reply_Base ( const CBlast4_get_seq_parts_reply_Base )
private

◆ CBlast4_get_seq_parts_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_seq_parts_reply_Base::CBlast4_get_seq_parts_reply_Base ( void  )

◆ CBlast4_get_seq_parts_request() [1/2]

CBlast4_get_seq_parts_request::CBlast4_get_seq_parts_request ( const CBlast4_get_seq_parts_request value)
private

◆ CBlast4_get_seq_parts_request() [2/2]

CBlast4_get_seq_parts_request::CBlast4_get_seq_parts_request ( void  )
inline

Definition at line 86 of file Blast_get_seq_parts_reques.hpp.

◆ CBlast4_get_seq_parts_request_Base() [1/2]

CBlast4_get_seq_parts_request_Base::CBlast4_get_seq_parts_request_Base ( const CBlast4_get_seq_parts_request_Base )
private

◆ CBlast4_get_seq_parts_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_seq_parts_request_Base::CBlast4_get_seq_parts_request_Base ( void  )

◆ CBlast4_get_sequences_reply() [1/2]

CBlast4_get_sequences_reply::CBlast4_get_sequences_reply ( const CBlast4_get_sequences_reply value)
private

◆ CBlast4_get_sequences_reply() [2/2]

CBlast4_get_sequences_reply::CBlast4_get_sequences_reply ( void  )
inline

Definition at line 86 of file Blast4_get_sequences_reply.hpp.

◆ CBlast4_get_sequences_reply_Base() [1/2]

CBlast4_get_sequences_reply_Base::CBlast4_get_sequences_reply_Base ( const CBlast4_get_sequences_reply_Base )
private

◆ CBlast4_get_sequences_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_sequences_reply_Base::CBlast4_get_sequences_reply_Base ( void  )

◆ CBlast4_get_sequences_request() [1/2]

CBlast4_get_sequences_request::CBlast4_get_sequences_request ( const CBlast4_get_sequences_request value)
private

◆ CBlast4_get_sequences_request() [2/2]

CBlast4_get_sequences_request::CBlast4_get_sequences_request ( void  )
inline

Definition at line 86 of file Blast4_get_sequenc_request.hpp.

◆ CBlast4_get_sequences_request_Base() [1/2]

CBlast4_get_sequences_request_Base::CBlast4_get_sequences_request_Base ( const CBlast4_get_sequences_request_Base )
private

◆ CBlast4_get_sequences_request_Base() [2/2]

END_CLASS_INFO CBlast4_get_sequences_request_Base::CBlast4_get_sequences_request_Base ( void  )

◆ CBlast4_get_windowmasked_taxids_reply() [1/2]

CBlast4_get_windowmasked_taxids_reply::CBlast4_get_windowmasked_taxids_reply ( const CBlast4_get_windowmasked_taxids_reply value)
private

◆ CBlast4_get_windowmasked_taxids_reply() [2/2]

CBlast4_get_windowmasked_taxids_reply::CBlast4_get_windowmasked_taxids_reply ( void  )
inline

Definition at line 86 of file Blas_get_windo_taxid_reply.hpp.

◆ CBlast4_get_windowmasked_taxids_reply_Base() [1/2]

CBlast4_get_windowmasked_taxids_reply_Base::CBlast4_get_windowmasked_taxids_reply_Base ( const CBlast4_get_windowmasked_taxids_reply_Base )
private

◆ CBlast4_get_windowmasked_taxids_reply_Base() [2/2]

END_CLASS_INFO CBlast4_get_windowmasked_taxids_reply_Base::CBlast4_get_windowmasked_taxids_reply_Base ( void  )

◆ CBlast4_ka_block() [1/2]

CBlast4_ka_block::CBlast4_ka_block ( const CBlast4_ka_block value)
private

◆ CBlast4_ka_block() [2/2]

CBlast4_ka_block::CBlast4_ka_block ( void  )
inline

Definition at line 86 of file Blast4_ka_block.hpp.

◆ CBlast4_ka_block_Base() [1/2]

CBlast4_ka_block_Base::CBlast4_ka_block_Base ( const CBlast4_ka_block_Base )
private

◆ CBlast4_ka_block_Base() [2/2]

END_CLASS_INFO CBlast4_ka_block_Base::CBlast4_ka_block_Base ( void  )

Definition at line 72 of file Blast4_ka_block_.cpp.

References CBlast4_ka_block_Base::m_set_State.

◆ CBlast4_mask() [1/2]

CBlast4_mask::CBlast4_mask ( const CBlast4_mask value)
private

◆ CBlast4_mask() [2/2]

CBlast4_mask::CBlast4_mask ( void  )
inline

Definition at line 86 of file Blast4_mask.hpp.

◆ CBlast4_mask_Base() [1/2]

CBlast4_mask_Base::CBlast4_mask_Base ( const CBlast4_mask_Base )
private

◆ CBlast4_mask_Base() [2/2]

END_CLASS_INFO CBlast4_mask_Base::CBlast4_mask_Base ( void  )

Definition at line 75 of file Blast4_mask_.cpp.

References CBlast4_mask_Base::m_set_State.

◆ CBlast4_matrix_id() [1/2]

CBlast4_matrix_id::CBlast4_matrix_id ( const CBlast4_matrix_id value)
private

◆ CBlast4_matrix_id() [2/2]

CBlast4_matrix_id::CBlast4_matrix_id ( void  )
inline

Definition at line 86 of file Blast4_matrix_id.hpp.

◆ CBlast4_matrix_id_Base() [1/2]

CBlast4_matrix_id_Base::CBlast4_matrix_id_Base ( const CBlast4_matrix_id_Base )
private

◆ CBlast4_matrix_id_Base() [2/2]

END_CLASS_INFO CBlast4_matrix_id_Base::CBlast4_matrix_id_Base ( void  )

Definition at line 74 of file Blast4_matrix_id_.cpp.

References CBlast4_matrix_id_Base::m_set_State.

◆ CBlast4_parameter() [1/2]

CBlast4_parameter::CBlast4_parameter ( const CBlast4_parameter value)
private

◆ CBlast4_parameter() [2/2]

CBlast4_parameter::CBlast4_parameter ( void  )
inline

Definition at line 86 of file Blast4_parameter.hpp.

◆ CBlast4_parameter_Base() [1/2]

CBlast4_parameter_Base::CBlast4_parameter_Base ( const CBlast4_parameter_Base )
private

◆ CBlast4_parameter_Base() [2/2]

END_CLASS_INFO CBlast4_parameter_Base::CBlast4_parameter_Base ( void  )

◆ CBlast4_parameter_info() [1/2]

CBlast4_parameter_info::CBlast4_parameter_info ( const CBlast4_parameter_info value)
private

◆ CBlast4_parameter_info() [2/2]

CBlast4_parameter_info::CBlast4_parameter_info ( void  )
inline

Definition at line 86 of file Blast4_parameter_info.hpp.

◆ CBlast4_parameter_info_Base() [1/2]

CBlast4_parameter_info_Base::CBlast4_parameter_info_Base ( const CBlast4_parameter_info_Base )
private

◆ CBlast4_parameter_info_Base() [2/2]

END_CLASS_INFO CBlast4_parameter_info_Base::CBlast4_parameter_info_Base ( void  )

◆ CBlast4_parameters_Base() [1/2]

CBlast4_parameters_Base::CBlast4_parameters_Base ( const CBlast4_parameters_Base )
private

◆ CBlast4_parameters_Base() [2/2]

END_CLASS_INFO CBlast4_parameters_Base::CBlast4_parameters_Base ( void  )

Definition at line 68 of file Blast4_parameters_.cpp.

References CBlast4_parameters_Base::m_set_State.

◆ CBlast4_phi_alignments() [1/2]

CBlast4_phi_alignments::CBlast4_phi_alignments ( const CBlast4_phi_alignments value)
private

◆ CBlast4_phi_alignments() [2/2]

CBlast4_phi_alignments::CBlast4_phi_alignments ( void  )
inline

Definition at line 86 of file Blast4_phi_alignments.hpp.

◆ CBlast4_phi_alignments_Base() [1/2]

CBlast4_phi_alignments_Base::CBlast4_phi_alignments_Base ( const CBlast4_phi_alignments_Base )
private

◆ CBlast4_phi_alignments_Base() [2/2]

END_CLASS_INFO CBlast4_phi_alignments_Base::CBlast4_phi_alignments_Base ( void  )

◆ CBlast4_program_info() [1/2]

CBlast4_program_info::CBlast4_program_info ( const CBlast4_program_info value)
private

◆ CBlast4_program_info() [2/2]

CBlast4_program_info::CBlast4_program_info ( void  )
inline

Definition at line 86 of file Blast4_program_info.hpp.

◆ CBlast4_program_info_Base() [1/2]

CBlast4_program_info_Base::CBlast4_program_info_Base ( const CBlast4_program_info_Base )
private

◆ CBlast4_program_info_Base() [2/2]

END_CLASS_INFO CBlast4_program_info_Base::CBlast4_program_info_Base ( void  )

Definition at line 80 of file Blast4_program_info_.cpp.

References CBlast4_program_info_Base::m_set_State.

◆ CBlast4_queries_Base() [1/2]

CBlast4_queries_Base::CBlast4_queries_Base ( const CBlast4_queries_Base )
private

◆ CBlast4_queries_Base() [2/2]

END_CHOICE_INFO CBlast4_queries_Base::CBlast4_queries_Base ( void  )

Definition at line 169 of file Blast4_queries_.cpp.

◆ CBlast4_queue_search_reply() [1/2]

CBlast4_queue_search_reply::CBlast4_queue_search_reply ( const CBlast4_queue_search_reply value)
private

◆ CBlast4_queue_search_reply() [2/2]

CBlast4_queue_search_reply::CBlast4_queue_search_reply ( void  )
inline

Definition at line 86 of file Blast4_queue_search_reply.hpp.

◆ CBlast4_queue_search_reply_Base() [1/2]

CBlast4_queue_search_reply_Base::CBlast4_queue_search_reply_Base ( const CBlast4_queue_search_reply_Base )
private

◆ CBlast4_queue_search_reply_Base() [2/2]

END_CLASS_INFO CBlast4_queue_search_reply_Base::CBlast4_queue_search_reply_Base ( void  )

◆ CBlast4_queue_search_request() [1/2]

CBlast4_queue_search_request::CBlast4_queue_search_request ( const CBlast4_queue_search_request value)
private

◆ CBlast4_queue_search_request() [2/2]

CBlast4_queue_search_request::CBlast4_queue_search_request ( void  )
inline

Definition at line 86 of file Blast4_queue_search_reques.hpp.

◆ CBlast4_queue_search_request_Base() [1/2]

CBlast4_queue_search_request_Base::CBlast4_queue_search_request_Base ( const CBlast4_queue_search_request_Base )
private

◆ CBlast4_queue_search_request_Base() [2/2]

END_CLASS_INFO CBlast4_queue_search_request_Base::CBlast4_queue_search_request_Base ( void  )

◆ CBlast4_range_Base() [1/2]

CBlast4_range_Base::CBlast4_range_Base ( const CBlast4_range_Base )
private

◆ CBlast4_range_Base() [2/2]

END_CLASS_INFO CBlast4_range_Base::CBlast4_range_Base ( void  )

Definition at line 70 of file Blast4_range_.cpp.

References CBlast4_range_Base::m_set_State.

◆ CBlast4_reply() [1/2]

CBlast4_reply::CBlast4_reply ( const CBlast4_reply value)
private

◆ CBlast4_reply() [2/2]

CBlast4_reply::CBlast4_reply ( void  )
inline

Definition at line 86 of file Blast4_reply.hpp.

◆ CBlast4_reply_Base() [1/2]

CBlast4_reply_Base::CBlast4_reply_Base ( const CBlast4_reply_Base )
private

◆ CBlast4_reply_Base() [2/2]

END_CLASS_INFO CBlast4_reply_Base::CBlast4_reply_Base ( void  )

◆ CBlast4_reply_body() [1/2]

CBlast4_reply_body::CBlast4_reply_body ( const CBlast4_reply_body value)
private

◆ CBlast4_reply_body() [2/2]

CBlast4_reply_body::CBlast4_reply_body ( void  )
inline

Definition at line 86 of file Blast4_reply_body.hpp.

◆ CBlast4_reply_body_Base() [1/2]

CBlast4_reply_body_Base::CBlast4_reply_body_Base ( const CBlast4_reply_body_Base )
private

◆ CBlast4_reply_body_Base() [2/2]

END_CHOICE_INFO CBlast4_reply_body_Base::CBlast4_reply_body_Base ( void  )

Definition at line 566 of file Blast4_reply_body_.cpp.

◆ CBlast4_request() [1/2]

CBlast4_request::CBlast4_request ( const CBlast4_request value)
private

◆ CBlast4_request() [2/2]

CBlast4_request::CBlast4_request ( void  )
inline

Definition at line 86 of file Blast4_request.hpp.

◆ CBlast4_request_Base() [1/2]

CBlast4_request_Base::CBlast4_request_Base ( const CBlast4_request_Base )
private

◆ CBlast4_request_Base() [2/2]

END_CLASS_INFO CBlast4_request_Base::CBlast4_request_Base ( void  )

◆ CBlast4_request_body() [1/2]

CBlast4_request_body::CBlast4_request_body ( const CBlast4_request_body value)
private

◆ CBlast4_request_body() [2/2]

CBlast4_request_body::CBlast4_request_body ( void  )
inline

Definition at line 86 of file Blast4_request_body.hpp.

◆ CBlast4_request_body_Base() [1/2]

CBlast4_request_body_Base::CBlast4_request_body_Base ( const CBlast4_request_body_Base )
private

◆ CBlast4_request_body_Base() [2/2]

END_CHOICE_INFO CBlast4_request_body_Base::CBlast4_request_body_Base ( void  )

Definition at line 375 of file Blast4_request_body_.cpp.

◆ CBlast4_seq_part_data() [1/2]

CBlast4_seq_part_data::CBlast4_seq_part_data ( const CBlast4_seq_part_data value)
private

◆ CBlast4_seq_part_data() [2/2]

CBlast4_seq_part_data::CBlast4_seq_part_data ( void  )
inline

Definition at line 86 of file Blast4_seq_part_data.hpp.

◆ CBlast4_seq_part_data_Base() [1/2]

CBlast4_seq_part_data_Base::CBlast4_seq_part_data_Base ( const CBlast4_seq_part_data_Base )
private

◆ CBlast4_seq_part_data_Base() [2/2]

END_CLASS_INFO CBlast4_seq_part_data_Base::CBlast4_seq_part_data_Base ( void  )

◆ CBlast4_simple_alignment() [1/2]

CBlast4_simple_alignment::CBlast4_simple_alignment ( const CBlast4_simple_alignment value)
private

◆ CBlast4_simple_alignment() [2/2]

CBlast4_simple_alignment::CBlast4_simple_alignment ( void  )
inline

Definition at line 86 of file Blast4_simple_alignment.hpp.

◆ CBlast4_simple_alignment_Base() [1/2]

CBlast4_simple_alignment_Base::CBlast4_simple_alignment_Base ( const CBlast4_simple_alignment_Base )
private

◆ CBlast4_simple_alignment_Base() [2/2]

END_CLASS_INFO CBlast4_simple_alignment_Base::CBlast4_simple_alignment_Base ( void  )

◆ CBlast4_simple_results() [1/2]

CBlast4_simple_results::CBlast4_simple_results ( const CBlast4_simple_results value)
private

◆ CBlast4_simple_results() [2/2]

CBlast4_simple_results::CBlast4_simple_results ( void  )
inline

Definition at line 86 of file Blast4_simple_results.hpp.

◆ CBlast4_simple_results_Base() [1/2]

CBlast4_simple_results_Base::CBlast4_simple_results_Base ( const CBlast4_simple_results_Base )
private

◆ CBlast4_simple_results_Base() [2/2]

END_CLASS_INFO CBlast4_simple_results_Base::CBlast4_simple_results_Base ( void  )

◆ CBlast4_subject() [1/2]

CBlast4_subject::CBlast4_subject ( const CBlast4_subject value)
private

◆ CBlast4_subject() [2/2]

CBlast4_subject::CBlast4_subject ( void  )
inline

Definition at line 86 of file Blast4_subject.hpp.

◆ CBlast4_subject_Base() [1/2]

CBlast4_subject_Base::CBlast4_subject_Base ( const CBlast4_subject_Base )
private

◆ CBlast4_subject_Base() [2/2]

END_CHOICE_INFO CBlast4_subject_Base::CBlast4_subject_Base ( void  )

Definition at line 132 of file Blast4_subject_.cpp.

◆ CBlast4_task_info() [1/2]

CBlast4_task_info::CBlast4_task_info ( const CBlast4_task_info value)
private

◆ CBlast4_task_info() [2/2]

CBlast4_task_info::CBlast4_task_info ( void  )
inline

Definition at line 86 of file Blast4_task_info.hpp.

◆ CBlast4_task_info_Base() [1/2]

CBlast4_task_info_Base::CBlast4_task_info_Base ( const CBlast4_task_info_Base )
private

◆ CBlast4_task_info_Base() [2/2]

END_CLASS_INFO CBlast4_task_info_Base::CBlast4_task_info_Base ( void  )

Definition at line 80 of file Blast4_task_info_.cpp.

References CBlast4_task_info_Base::m_set_State.

◆ CBlast4_value() [1/2]

CBlast4_value::CBlast4_value ( const CBlast4_value value)
private

◆ CBlast4_value() [2/2]

CBlast4_value::CBlast4_value ( void  )
inline

Definition at line 86 of file Blast4_value.hpp.

◆ CBlast4_value_Base() [1/2]

CBlast4_value_Base::CBlast4_value_Base ( const CBlast4_value_Base )
private

◆ CBlast4_value_Base() [2/2]

END_CHOICE_INFO CBlast4_value_Base::CBlast4_value_Base ( void  )

Definition at line 498 of file Blast4_value_.cpp.

◆ CBlast4Client() [1/2]

CBlast4Client::CBlast4Client ( const CBlast4Client value)
private

◆ CBlast4Client() [2/2]

CBlast4Client::CBlast4Client ( void  )
inline

Definition at line 86 of file blastclient.hpp.

◆ CBlast4Client_Base()

CBlast4Client_Base::CBlast4Client_Base ( void  )

Definition at line 275 of file blastclient_.cpp.

◆ CheckSelected() [1/6]

void CBlast4_cutoff_Base::CheckSelected ( E_Choice  index) const
inline

Verify selection, throw exception if it differs from the expected.

Parameters
indexExpected selection.

Definition at line 273 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::m_choice, and CBlast4_cutoff_Base::ThrowInvalidSelection().

Referenced by CBlast4_cutoff_Base::GetE_value(), and CBlast4_cutoff_Base::GetRaw_score().

◆ CheckSelected() [2/6]

void CBlast4_queries_Base::CheckSelected ( E_Choice  index) const
inline

Verify selection, throw exception if it differs from the expected.

Parameters
indexExpected selection.

Definition at line 271 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::m_choice, and CBlast4_queries_Base::ThrowInvalidSelection().

Referenced by CBlast4_queries_Base::GetBioseq_set(), CBlast4_queries_Base::GetPssm(), and CBlast4_queries_Base::GetSeq_loc_list().

◆ CheckSelected() [3/6]

void CBlast4_reply_body_Base::CheckSelected ( E_Choice  index) const
inline

◆ CheckSelected() [4/6]

void CBlast4_request_body_Base::CheckSelected ( E_Choice  index) const
inline

◆ CheckSelected() [5/6]

void CBlast4_subject_Base::CheckSelected ( E_Choice  index) const
inline

Verify selection, throw exception if it differs from the expected.

Parameters
indexExpected selection.

Definition at line 263 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::m_choice, and CBlast4_subject_Base::ThrowInvalidSelection().

Referenced by CBlast4_subject_Base::GetDatabase(), CBlast4_subject_Base::GetSeq_loc_list(), and CBlast4_subject_Base::GetSequences().

◆ CheckSelected() [6/6]

void CBlast4_value_Base::CheckSelected ( E_Choice  index) const
inline

◆ DECLARE_INTERNAL_TYPE_INFO() [1/55]

CBlast4_get_search_results_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [2/55]

CBlast4_get_search_results_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [3/55]

CBlast4_get_search_status_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [4/55]

CBlast4_get_search_status_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [5/55]

CBlast4_get_search_strategy_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [6/55]

CBlast4_get_search_strategy_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [7/55]

CBlast4_get_windowmasked_taxids_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [8/55]

CBlast4_alignments_for_query_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [9/55]

CBlast4_archive_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [10/55]

CBlast4_cutoff_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [11/55]

CBlast4_database_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [12/55]

CBlast4_database_info_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [13/55]

CBlast4_error_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [14/55]

CBlast4_finish_params_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [15/55]

CBlast4_get_databases_ex_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [16/55]

CBlast4_get_databases_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [17/55]

CBlast4_get_matrices_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [18/55]

CBlast4_get_parameters_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [19/55]

CBlast4_get_paramsets_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [20/55]

CBlast4_get_programs_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [21/55]

CBlast4_get_queries_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [22/55]

CBlast4_get_seq_parts_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [23/55]

CBlast4_get_sequences_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [24/55]

CBlast4_get_sequences_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [25/55]

CBlast4_ka_block_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [26/55]

CBlast4_mask_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [27/55]

CBlast4_matrix_id_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [28/55]

CBlast4_parameter_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [29/55]

CBlast4_parameter_info_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [30/55]

CBlast4_parameters_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [31/55]

CBlast4_phi_alignments_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [32/55]

CBlast4_program_info_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [33/55]

CBlast4_queries_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [34/55]

CBlast4_queue_search_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [35/55]

CBlast4_queue_search_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [36/55]

CBlast4_range_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [37/55]

CBlast4_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [38/55]

CBlast4_reply_body_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [39/55]

CBlast4_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [40/55]

CBlast4_request_body_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [41/55]

CBlast4_seq_part_data_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [42/55]

CBlast4_simple_alignment_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [43/55]

CBlast4_simple_results_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [44/55]

CBlast4_subject_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [45/55]

CBlast4_task_info_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [46/55]

CBlast4_value_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [47/55]

CBlast4_finish_params_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [48/55]

CBlast4_get_databases_ex_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [49/55]

CBlast4_get_protocol_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [50/55]

CBlast4_get_protocol_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [51/55]

CBlast4_get_request_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [52/55]

CBlast4_get_request_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [53/55]

CBlast4_get_search_info_reply_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [54/55]

CBlast4_get_search_info_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [55/55]

CBlast4_get_seq_parts_request_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DoSelect() [1/6]

void CBlast4_cutoff_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

◆ DoSelect() [2/6]

void CBlast4_queries_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

◆ DoSelect() [3/6]

void CBlast4_reply_body_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

◆ DoSelect() [4/6]

void CBlast4_request_body_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

◆ DoSelect() [5/6]

void CBlast4_subject_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

◆ DoSelect() [6/6]

void CBlast4_value_Base::DoSelect ( E_Choice  index,
CObjectMemoryPool pool = 0 
)
private

Definition at line 124 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Big_integer, CBlast4_value_Base::e_Big_integer_list, CBlast4_value_Base::e_Bioseq, CBlast4_value_Base::e_Bioseq_list, CBlast4_value_Base::e_Bioseq_set, CBlast4_value_Base::e_Boolean, CBlast4_value_Base::e_Boolean_list, CBlast4_value_Base::e_Cutoff, CBlast4_value_Base::e_Cutoff_list, CBlast4_value_Base::e_Integer, CBlast4_value_Base::e_Integer_list, CBlast4_value_Base::e_Matrix, CBlast4_value_Base::e_Matrix_list, CBlast4_value_Base::e_Query_mask, CBlast4_value_Base::e_Real, CBlast4_value_Base::e_Real_list, CBlast4_value_Base::e_Seq_align, CBlast4_value_Base::e_Seq_align_list, CBlast4_value_Base::e_Seq_align_set, CBlast4_value_Base::e_Seq_id, CBlast4_value_Base::e_Seq_id_list, CBlast4_value_Base::e_Seq_loc, CBlast4_value_Base::e_Seq_loc_list, CBlast4_value_Base::e_Strand_type, CBlast4_value_Base::e_Strand_type_list, CBlast4_value_Base::e_String, CBlast4_value_Base::e_String_list, CBlast4_value_Base::m_Big_integer, CBlast4_value_Base::m_Big_integer_list, CBlast4_value_Base::m_Bioseq_list, CBlast4_value_Base::m_Boolean, CBlast4_value_Base::m_Boolean_list, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_Cutoff_list, CBlast4_value_Base::m_Integer, CBlast4_value_Base::m_Integer_list, CBlast4_value_Base::m_Matrix_list, CBlast4_value_Base::m_object, CBlast4_value_Base::m_Real, CBlast4_value_Base::m_Real_list, CBlast4_value_Base::m_Seq_align_list, CBlast4_value_Base::m_Seq_id_list, CBlast4_value_Base::m_Seq_loc_list, CBlast4_value_Base::m_Strand_type, CBlast4_value_Base::m_Strand_type_list, CBlast4_value_Base::m_string, and CBlast4_value_Base::m_String_list.

◆ Get() [1/14]

const CBlast4_request & CBlast4_get_search_strategy_reply_Base::Get ( void  ) const
inline

Definition at line 103 of file Blas_get_searc_strat_reply_.hpp.

◆ Get() [2/14]

const CBlast4_get_windowmasked_taxids_reply_Base::Tdata & CBlast4_get_windowmasked_taxids_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 160 of file Blas_get_windo_taxid_reply_.hpp.

References CBlast4_get_windowmasked_taxids_reply_Base::m_data.

◆ Get() [3/14]

const CBlast4_parameters & CBlast4_finish_params_reply_Base::Get ( void  ) const
inline

Definition at line 101 of file Blast4_finish_params_reply_.hpp.

◆ Get() [4/14]

const CBlast4_get_databases_ex_reply_Base::Tdata & CBlast4_get_databases_ex_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_databa_ex_reply_.hpp.

References CBlast4_get_databases_ex_reply_Base::m_data.

◆ Get() [5/14]

const CBlast4_get_databases_reply_Base::Tdata & CBlast4_get_databases_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_databases_reply_.hpp.

References CBlast4_get_databases_reply_Base::m_data.

◆ Get() [6/14]

const CBlast4_get_matrices_reply_Base::Tdata & CBlast4_get_matrices_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_matrices_reply_.hpp.

References CBlast4_get_matrices_reply_Base::m_data.

◆ Get() [7/14]

const CBlast4_get_parameters_reply_Base::Tdata & CBlast4_get_parameters_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_parameter_reply_.hpp.

References CBlast4_get_parameters_reply_Base::m_data.

◆ Get() [8/14]

const CBlast4_get_paramsets_reply_Base::Tdata & CBlast4_get_paramsets_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 167 of file Blast4_get_paramsets_reply_.hpp.

References CBlast4_get_paramsets_reply_Base::m_data.

◆ Get() [9/14]

const CBlast4_get_programs_reply_Base::Tdata & CBlast4_get_programs_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_programs_reply_.hpp.

References CBlast4_get_programs_reply_Base::m_data.

◆ Get() [10/14]

const CBlast4_get_seq_parts_reply_Base::Tdata & CBlast4_get_seq_parts_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_seq_parts_reply_.hpp.

References CBlast4_get_seq_parts_reply_Base::m_data.

◆ Get() [11/14]

const CBlast4_get_sequences_reply_Base::Tdata & CBlast4_get_sequences_reply_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_get_sequences_reply_.hpp.

References CBlast4_get_sequences_reply_Base::m_data.

◆ Get() [12/14]

const CBlast4_parameters_Base::Tdata & CBlast4_parameters_Base::Get ( void  ) const
inline

Get the member data.

Returns
Reference to the member data.

Definition at line 164 of file Blast4_parameters_.hpp.

References CBlast4_parameters_Base::m_data.

Referenced by CBlast4_parameters::GetParamByName().

◆ Get() [13/14]

const CBlast4_parameters & CBlast4_get_protocol_info_reply_Base::Get ( void  ) const
inline

Definition at line 101 of file Blast_get_proto_info_reply_.hpp.

◆ Get() [14/14]

const CBlast4_parameters & CBlast4_get_protocol_info_request_Base::Get ( void  ) const
inline

Definition at line 102 of file Blast_get_proto_info_reque_.hpp.

◆ GetAlgorithm_options() [1/2]

const CBlast4_queue_search_request_Base::TAlgorithm_options & CBlast4_queue_search_request_Base::GetAlgorithm_options ( void  ) const
inline

◆ GetAlgorithm_options() [2/2]

const CBlast4_get_request_info_reply_Base::TAlgorithm_options & CBlast4_get_request_info_reply_Base::GetAlgorithm_options ( void  ) const
inline

Get the Algorithm_options member data.

Returns
Reference to the member data.

Definition at line 701 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Algorithm_options, and CBlast4_get_request_info_reply_Base::ResetAlgorithm_options().

◆ GetAlignments() [1/2]

const CBlast4_get_search_results_reply_Base::TAlignments & CBlast4_get_search_results_reply_Base::GetAlignments ( void  ) const
inline

◆ GetAlignments() [2/2]

const CBlast4_alignments_for_query_Base::TAlignments & CBlast4_alignments_for_query_Base::GetAlignments ( void  ) const
inline

Get the Alignments member data.

Returns
Reference to the member data.

Definition at line 261 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::m_Alignments.

◆ GetAll_alignments()

const CBlast4_simple_results_Base::TAll_alignments & CBlast4_simple_results_Base::GetAll_alignments ( void  ) const
inline

Get the All_alignments member data.

Returns
Reference to the member data.

Definition at line 170 of file Blast4_simple_results_.hpp.

References CBlast4_simple_results_Base::m_All_alignments.

◆ GetBig_integer()

CBlast4_value_Base::TBig_integer CBlast4_value_Base::GetBig_integer ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 942 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Big_integer, and CBlast4_value_Base::m_Big_integer.

Referenced by CBlast4Field::GetBig_integer(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetBig_integer_list()

const CBlast4_value_Base::TBig_integer_list & CBlast4_value_Base::GetBig_integer_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1133 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Big_integer_list, and CBlast4_value_Base::m_Big_integer_list.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetBioseq()

const CBlast4_value_Base::TBioseq & CBlast4_value_Base::GetBioseq ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 255 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Bioseq, and CBlast4_value_Base::m_object.

◆ GetBioseq_list()

const CBlast4_value_Base::TBioseq_list & CBlast4_value_Base::GetBioseq_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1153 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Bioseq_list, and CBlast4_value_Base::m_Bioseq_list.

◆ GetBioseq_set() [1/2]

const CBlast4_queries_Base::TBioseq_set & CBlast4_queries_Base::GetBioseq_set ( void  ) const

◆ GetBioseq_set() [2/2]

const CBlast4_value_Base::TBioseq_set & CBlast4_value_Base::GetBioseq_set ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 393 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Bioseq_set, and CBlast4_value_Base::m_object.

◆ GetBit_score()

CBlast4_simple_alignment_Base::TBit_score CBlast4_simple_alignment_Base::GetBit_score ( void  ) const
inline

Get the Bit_score member data.

Returns
Copy of the member data.

Definition at line 525 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::CanGetBit_score(), CBlast4_simple_alignment_Base::m_Bit_score, and CSerialObject::ThrowUnassigned().

◆ GetBody() [1/2]

const CBlast4_reply_Base::TBody & CBlast4_reply_Base::GetBody ( void  ) const
inline

Get the Body member data.

Returns
Reference to the member data.

Definition at line 273 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_Body, and CBlast4_reply_Base::ResetBody().

◆ GetBody() [2/2]

const CBlast4_request_Base::TBody & CBlast4_request_Base::GetBody ( void  ) const
inline

Get the Body member data.

Returns
Reference to the member data.

Definition at line 304 of file Blast4_request_.hpp.

References CBlast4_request_Base::m_Body, and CBlast4_request_Base::ResetBody().

Referenced by BOOST_AUTO_TEST_CASE(), s_BuildArchiveAll(), and CMultiAligner::x_SetDomainHits().

◆ GetBoolean()

CBlast4_value_Base::TBoolean CBlast4_value_Base::GetBoolean ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 975 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Boolean, and CBlast4_value_Base::m_Boolean.

Referenced by CBlast4Field::GetBoolean(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetBoolean_list()

const CBlast4_value_Base::TBoolean_list & CBlast4_value_Base::GetBoolean_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1173 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Boolean_list, and CBlast4_value_Base::m_Boolean_list.

◆ GetCode()

CBlast4_error_Base::TCode CBlast4_error_Base::GetCode ( void  ) const
inline

Get the Code member data.

Returns
Copy of the member data.

Definition at line 259 of file Blast4_error_.hpp.

References CBlast4_error_Base::CanGetCode(), CBlast4_error_Base::m_Code, and CSerialObject::ThrowUnassigned().

◆ GetCreated_by()

const CBlast4_get_request_info_reply_Base::TCreated_by & CBlast4_get_request_info_reply_Base::GetCreated_by ( void  ) const
inline

Get the Created_by member data.

Returns
Reference to the member data.

Definition at line 624 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::CanGetCreated_by(), CBlast4_get_request_info_reply_Base::m_Created_by, and CSerialObject::ThrowUnassigned().

◆ GetCutoff()

const CBlast4_value_Base::TCutoff & CBlast4_value_Base::GetCutoff ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 277 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Cutoff, and CBlast4_value_Base::m_object.

Referenced by CBlast4Field::GetCutoff(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetCutoff_list()

const CBlast4_value_Base::TCutoff_list & CBlast4_value_Base::GetCutoff_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1193 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Cutoff_list, and CBlast4_value_Base::m_Cutoff_list.

◆ GetData()

const CBlast4_seq_part_data_Base::TData & CBlast4_seq_part_data_Base::GetData ( void  ) const
inline

Get the Data member data.

Returns
Reference to the member data.

Definition at line 245 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Data, and CBlast4_seq_part_data_Base::ResetData().

◆ GetDatabase() [1/5]

const CBlast4_database_info_Base::TDatabase & CBlast4_database_info_Base::GetDatabase ( void  ) const
inline

Get the Database member data.

Returns
Reference to the member data.

Definition at line 458 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Database, and CBlast4_database_info_Base::ResetDatabase().

◆ GetDatabase() [2/5]

const CBlast4_get_sequences_request_Base::TDatabase & CBlast4_get_sequences_request_Base::GetDatabase ( void  ) const
inline

Get the Database member data.

Returns
Reference to the member data.

Definition at line 300 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Database, and CBlast4_get_sequences_request_Base::ResetDatabase().

◆ GetDatabase() [3/5]

const CBlast4_subject_Base::TDatabase & CBlast4_subject_Base::GetDatabase ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 292 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::CheckSelected(), CBlast4_subject_Base::e_Database, and CBlast4_subject_Base::m_string.

Referenced by BOOST_AUTO_TEST_CASE(), and s_ImportDatabase().

◆ GetDatabase() [4/5]

const CBlast4_get_request_info_reply_Base::TDatabase & CBlast4_get_request_info_reply_Base::GetDatabase ( void  ) const
inline

Get the Database member data.

Returns
Reference to the member data.

Definition at line 500 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Database, and CBlast4_get_request_info_reply_Base::ResetDatabase().

◆ GetDatabase() [5/5]

const CBlast4_get_seq_parts_request_Base::TDatabase & CBlast4_get_seq_parts_request_Base::GetDatabase ( void  ) const
inline

Get the Database member data.

Returns
Reference to the member data.

Definition at line 216 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_Database, and CBlast4_get_seq_parts_request_Base::ResetDatabase().

◆ GetDefaultRequest()

const CBlast4Client_Base::TRequest & CBlast4Client_Base::GetDefaultRequest ( void  ) const
inlinevirtual

Definition at line 178 of file blastclient_.hpp.

References CBlast4Client_Base::m_DefaultRequest.

◆ GetDescription()

const CBlast4_database_info_Base::TDescription & CBlast4_database_info_Base::GetDescription ( void  ) const
inline

Get the Description member data.

Returns
Reference to the member data.

Definition at line 488 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetDescription(), CBlast4_database_info_Base::m_Description, and CSerialObject::ThrowUnassigned().

◆ GetDocumentation()

const CBlast4_task_info_Base::TDocumentation & CBlast4_task_info_Base::GetDocumentation ( void  ) const
inline

Get the Documentation member data.

Returns
Reference to the member data.

Definition at line 262 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::CanGetDocumentation(), CBlast4_task_info_Base::m_Documentation, and CSerialObject::ThrowUnassigned().

◆ GetE_value() [1/2]

CBlast4_cutoff_Base::TE_value CBlast4_cutoff_Base::GetE_value ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 302 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::CheckSelected(), CBlast4_cutoff_Base::e_E_value, and CBlast4_cutoff_Base::m_E_value.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetE_value() [2/2]

CBlast4_simple_alignment_Base::TE_value CBlast4_simple_alignment_Base::GetE_value ( void  ) const
inline

Get the E_value member data.

Returns
Copy of the member data.

Definition at line 478 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::CanGetE_value(), CBlast4_simple_alignment_Base::m_E_value, and CSerialObject::ThrowUnassigned().

◆ GetEnd()

CBlast4_range_Base::TEnd CBlast4_range_Base::GetEnd ( void  ) const
inline

Get the End member data.

Returns
Copy of the member data.

Definition at line 303 of file Blast4_range_.hpp.

References CBlast4_range_Base::CanGetEnd(), CBlast4_range_Base::m_End, and CSerialObject::ThrowUnassigned().

Referenced by CBlast4_range::operator TSeqRange().

◆ GetErrors()

const CBlast4_reply_Base::TErrors & CBlast4_reply_Base::GetErrors ( void  ) const
inline

Get the Errors member data.

Returns
Reference to the member data.

Definition at line 248 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_Errors.

◆ GetExtended()

const CBlast4_database_info_Base::TExtended & CBlast4_database_info_Base::GetExtended ( void  ) const
inline

Get the Extended member data.

Returns
Reference to the member data.

Definition at line 770 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetExtended(), CBlast4_database_info_Base::m_Extended, and CSerialObject::ThrowUnassigned().

◆ GetFinish_params() [1/2]

const CBlast4_reply_body_Base::TFinish_params & CBlast4_reply_body_Base::GetFinish_params ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 186 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Finish_params, and CBlast4_reply_body_Base::m_object.

◆ GetFinish_params() [2/2]

const CBlast4_request_body_Base::TFinish_params & CBlast4_request_body_Base::GetFinish_params ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 150 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Finish_params, and CBlast4_request_body_Base::m_object.

◆ GetFormat_options() [1/2]

const CBlast4_queue_search_request_Base::TFormat_options & CBlast4_queue_search_request_Base::GetFormat_options ( void  ) const
inline

Get the Format_options member data.

Returns
Reference to the member data.

Definition at line 714 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::CanGetFormat_options(), CBlast4_queue_search_request_Base::m_Format_options, and CSerialObject::ThrowUnassigned().

Referenced by CImportStrategy::FetchData().

◆ GetFormat_options() [2/2]

const CBlast4_get_request_info_reply_Base::TFormat_options & CBlast4_get_request_info_reply_Base::GetFormat_options ( void  ) const
inline

Get the Format_options member data.

Returns
Reference to the member data.

Definition at line 761 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::CanGetFormat_options(), CBlast4_get_request_info_reply_Base::m_Format_options, and CSerialObject::ThrowUnassigned().

◆ GetFrame()

CBlast4_mask_Base::TFrame CBlast4_mask_Base::GetFrame ( void  ) const
inline

Get the Frame member data.

Returns
Copy of the member data.

Definition at line 255 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::CanGetFrame(), CBlast4_mask_Base::m_Frame, and CSerialObject::ThrowUnassigned().

◆ GetFull_query_range()

const CBlast4_simple_alignment_Base::TFull_query_range & CBlast4_simple_alignment_Base::GetFull_query_range ( void  ) const
inline

Get the Full_query_range member data.

Returns
Reference to the member data.

Definition at line 659 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_query_range, and CBlast4_simple_alignment_Base::ResetFull_query_range().

◆ GetFull_subject_range()

const CBlast4_simple_alignment_Base::TFull_subject_range & CBlast4_simple_alignment_Base::GetFull_subject_range ( void  ) const
inline

Get the Full_subject_range member data.

Returns
Reference to the member data.

Definition at line 689 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_subject_range, and CBlast4_simple_alignment_Base::ResetFull_subject_range().

◆ GetGapped()

CBlast4_ka_block_Base::TGapped CBlast4_ka_block_Base::GetGapped ( void  ) const
inline

Get the Gapped member data.

Returns
Copy of the member data.

Definition at line 434 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::CanGetGapped(), CBlast4_ka_block_Base::m_Gapped, and CSerialObject::ThrowUnassigned().

◆ GetGet_databases()

const CBlast4_reply_body_Base::TGet_databases & CBlast4_reply_body_Base::GetGet_databases ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 208 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_databases, and CBlast4_reply_body_Base::m_object.

◆ GetGet_databases_ex() [1/2]

const CBlast4_reply_body_Base::TGet_databases_ex & CBlast4_reply_body_Base::GetGet_databases_ex ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 516 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_databases_ex, and CBlast4_reply_body_Base::m_object.

◆ GetGet_databases_ex() [2/2]

const CBlast4_request_body_Base::TGet_databases_ex & CBlast4_request_body_Base::GetGet_databases_ex ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 326 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_databases_ex, and CBlast4_request_body_Base::m_object.

◆ GetGet_matrices()

const CBlast4_reply_body_Base::TGet_matrices & CBlast4_reply_body_Base::GetGet_matrices ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 230 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_matrices, and CBlast4_reply_body_Base::m_object.

◆ GetGet_parameters()

const CBlast4_reply_body_Base::TGet_parameters & CBlast4_reply_body_Base::GetGet_parameters ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 252 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_parameters, and CBlast4_reply_body_Base::m_object.

◆ GetGet_paramsets()

const CBlast4_reply_body_Base::TGet_paramsets & CBlast4_reply_body_Base::GetGet_paramsets ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 274 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_paramsets, and CBlast4_reply_body_Base::m_object.

◆ GetGet_programs()

const CBlast4_reply_body_Base::TGet_programs & CBlast4_reply_body_Base::GetGet_programs ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 296 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_programs, and CBlast4_reply_body_Base::m_object.

◆ GetGet_protocol_info() [1/2]

const CBlast4_reply_body_Base::TGet_protocol_info & CBlast4_reply_body_Base::GetGet_protocol_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 472 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_protocol_info, and CBlast4_reply_body_Base::m_object.

◆ GetGet_protocol_info() [2/2]

const CBlast4_request_body_Base::TGet_protocol_info & CBlast4_request_body_Base::GetGet_protocol_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 282 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_protocol_info, and CBlast4_request_body_Base::m_object.

◆ GetGet_queries()

const CBlast4_reply_body_Base::TGet_queries & CBlast4_reply_body_Base::GetGet_queries ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 384 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_queries, and CBlast4_reply_body_Base::m_object.

◆ GetGet_request_info() [1/2]

const CBlast4_reply_body_Base::TGet_request_info & CBlast4_reply_body_Base::GetGet_request_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 406 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_request_info, and CBlast4_reply_body_Base::m_object.

◆ GetGet_request_info() [2/2]

const CBlast4_request_body_Base::TGet_request_info & CBlast4_request_body_Base::GetGet_request_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 238 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_request_info, and CBlast4_request_body_Base::m_object.

◆ GetGet_search_info() [1/2]

const CBlast4_reply_body_Base::TGet_search_info & CBlast4_reply_body_Base::GetGet_search_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 494 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_search_info, and CBlast4_reply_body_Base::m_object.

◆ GetGet_search_info() [2/2]

const CBlast4_request_body_Base::TGet_search_info & CBlast4_request_body_Base::GetGet_search_info ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 304 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_search_info, and CBlast4_request_body_Base::m_object.

◆ GetGet_search_results() [1/2]

const CBlast4_reply_body_Base::TGet_search_results & CBlast4_reply_body_Base::GetGet_search_results ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 318 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_search_results, and CBlast4_reply_body_Base::m_object.

◆ GetGet_search_results() [2/2]

const CBlast4_request_body_Base::TGet_search_results & CBlast4_request_body_Base::GetGet_search_results ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 172 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_search_results, and CBlast4_request_body_Base::m_object.

◆ GetGet_sequence_parts() [1/2]

const CBlast4_reply_body_Base::TGet_sequence_parts & CBlast4_reply_body_Base::GetGet_sequence_parts ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 428 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_sequence_parts, and CBlast4_reply_body_Base::m_object.

◆ GetGet_sequence_parts() [2/2]

const CBlast4_request_body_Base::TGet_sequence_parts & CBlast4_request_body_Base::GetGet_sequence_parts ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 260 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_sequence_parts, and CBlast4_request_body_Base::m_object.

◆ GetGet_sequences() [1/2]

const CBlast4_reply_body_Base::TGet_sequences & CBlast4_reply_body_Base::GetGet_sequences ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 340 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_sequences, and CBlast4_reply_body_Base::m_object.

◆ GetGet_sequences() [2/2]

const CBlast4_request_body_Base::TGet_sequences & CBlast4_request_body_Base::GetGet_sequences ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 194 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::CheckSelected(), CBlast4_request_body_Base::e_Get_sequences, and CBlast4_request_body_Base::m_object.

◆ GetGet_windowmasked_taxids()

const CBlast4_reply_body_Base::TGet_windowmasked_taxids & CBlast4_reply_body_Base::GetGet_windowmasked_taxids ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 450 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Get_windowmasked_taxids, and CBlast4_reply_body_Base::m_object.

◆ GetH()

CBlast4_ka_block_Base::TH CBlast4_ka_block_Base::GetH ( void  ) const
inline

Get the H member data.

Returns
Copy of the member data.

Definition at line 387 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::CanGetH(), CBlast4_ka_block_Base::m_H, and CSerialObject::ThrowUnassigned().

◆ GetId()

const CBlast4_seq_part_data_Base::TId & CBlast4_seq_part_data_Base::GetId ( void  ) const
inline

Get the Id member data.

Returns
Reference to the member data.

Definition at line 215 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Id, and CBlast4_seq_part_data_Base::ResetId().

◆ GetIdent()

const CBlast4_request_Base::TIdent & CBlast4_request_Base::GetIdent ( void  ) const
inline

Get the Ident member data.

Returns
Reference to the member data.

Definition at line 257 of file Blast4_request_.hpp.

References CBlast4_request_Base::CanGetIdent(), CBlast4_request_Base::m_Ident, and CSerialObject::ThrowUnassigned().

◆ GetInfo() [1/2]

const CBlast4_get_search_info_reply_Base::TInfo & CBlast4_get_search_info_reply_Base::GetInfo ( void  ) const
inline

◆ GetInfo() [2/2]

const CBlast4_get_search_info_request_Base::TInfo & CBlast4_get_search_info_request_Base::GetInfo ( void  ) const
inline

Get the Info member data.

Returns
Reference to the member data.

Definition at line 263 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::CanGetInfo(), CBlast4_get_search_info_request_Base::m_Info, and CSerialObject::ThrowUnassigned().

◆ GetInteger()

CBlast4_value_Base::TInteger CBlast4_value_Base::GetInteger ( void  ) const
inline

◆ GetInteger_list()

const CBlast4_value_Base::TInteger_list & CBlast4_value_Base::GetInteger_list ( void  ) const
inline

◆ GetK()

CBlast4_ka_block_Base::TK CBlast4_ka_block_Base::GetK ( void  ) const
inline

Get the K member data.

Returns
Copy of the member data.

Definition at line 340 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::CanGetK(), CBlast4_ka_block_Base::m_K, and CSerialObject::ThrowUnassigned().

◆ GetKa_blocks()

const CBlast4_get_search_results_reply_Base::TKa_blocks & CBlast4_get_search_results_reply_Base::GetKa_blocks ( void  ) const
inline

Get the Ka_blocks member data.

Returns
Reference to the member data.

Definition at line 471 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Ka_blocks.

◆ GetLambda()

CBlast4_ka_block_Base::TLambda CBlast4_ka_block_Base::GetLambda ( void  ) const
inline

Get the Lambda member data.

Returns
Copy of the member data.

Definition at line 293 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::CanGetLambda(), CBlast4_ka_block_Base::m_Lambda, and CSerialObject::ThrowUnassigned().

◆ GetLast_updated()

const CBlast4_database_info_Base::TLast_updated & CBlast4_database_info_Base::GetLast_updated ( void  ) const
inline

Get the Last_updated member data.

Returns
Reference to the member data.

Definition at line 535 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetLast_updated(), CBlast4_database_info_Base::m_Last_updated, and CSerialObject::ThrowUnassigned().

◆ GetLocations()

const CBlast4_mask_Base::TLocations & CBlast4_mask_Base::GetLocations ( void  ) const
inline

Get the Locations member data.

Returns
Reference to the member data.

Definition at line 223 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_Locations.

◆ GetMasks()

const CBlast4_get_search_results_reply_Base::TMasks & CBlast4_get_search_results_reply_Base::GetMasks ( void  ) const
inline

Get the Masks member data.

Returns
Reference to the member data.

Definition at line 446 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Masks.

◆ GetMatrix()

const CBlast4_value_Base::TMatrix & CBlast4_value_Base::GetMatrix ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 299 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Matrix, and CBlast4_value_Base::m_object.

Referenced by CBlast4Field::GetMatrix().

◆ GetMatrix_list()

const CBlast4_value_Base::TMatrix_list & CBlast4_value_Base::GetMatrix_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1233 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Matrix_list, and CBlast4_value_Base::m_Matrix_list.

◆ GetMessage()

const CBlast4_error_Base::TMessage & CBlast4_error_Base::GetMessage ( void  ) const
inline

Get the Message member data.

Returns
Reference to the member data.

Definition at line 299 of file Blast4_error_.hpp.

References CBlast4_error_Base::CanGetMessage(), CBlast4_error_Base::m_Message, and CSerialObject::ThrowUnassigned().

◆ GetMessages()

const CBlast4_archive_Base::TMessages & CBlast4_archive_Base::GetMessages ( void  ) const
inline

Get the Messages member data.

Returns
Reference to the member data.

Definition at line 314 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Messages.

◆ GetName() [1/5]

const CBlast4_database_Base::TName & CBlast4_database_Base::GetName ( void  ) const
inline

◆ GetName() [2/5]

const CBlast4_matrix_id_Base::TName & CBlast4_matrix_id_Base::GetName ( void  ) const
inline

Get the Name member data.

Returns
Reference to the member data.

Definition at line 259 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::CanGetName(), CBlast4_matrix_id_Base::m_Name, and CSerialObject::ThrowUnassigned().

◆ GetName() [3/5]

const CBlast4_parameter_Base::TName & CBlast4_parameter_Base::GetName ( void  ) const
inline

Get the Name member data.

Returns
Reference to the member data.

Definition at line 215 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::CanGetName(), CBlast4_parameter_Base::m_Name, and CSerialObject::ThrowUnassigned().

Referenced by CBlast4Field::Match().

◆ GetName() [4/5]

const CBlast4_parameter_info_Base::TName & CBlast4_parameter_info_Base::GetName ( void  ) const
inline

Get the Name member data.

Returns
Reference to the member data.

Definition at line 212 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::CanGetName(), CBlast4_parameter_info_Base::m_Name, and CSerialObject::ThrowUnassigned().

◆ GetName() [5/5]

const CBlast4_task_info_Base::TName & CBlast4_task_info_Base::GetName ( void  ) const
inline

Get the Name member data.

Returns
Reference to the member data.

Definition at line 215 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::CanGetName(), CBlast4_task_info_Base::m_Name, and CSerialObject::ThrowUnassigned().

◆ GetNum_alignments()

CBlast4_phi_alignments_Base::TNum_alignments CBlast4_phi_alignments_Base::GetNum_alignments ( void  ) const
inline

Get the Num_alignments member data.

Returns
Copy of the member data.

Definition at line 215 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::CanGetNum_alignments(), CBlast4_phi_alignments_Base::m_Num_alignments, and CSerialObject::ThrowUnassigned().

◆ GetNum_identities()

CBlast4_simple_alignment_Base::TNum_identities CBlast4_simple_alignment_Base::GetNum_identities ( void  ) const
inline

Get the Num_identities member data.

Returns
Copy of the member data.

Definition at line 572 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::CanGetNum_identities(), CBlast4_simple_alignment_Base::m_Num_identities, and CSerialObject::ThrowUnassigned().

◆ GetNum_indels()

CBlast4_simple_alignment_Base::TNum_indels CBlast4_simple_alignment_Base::GetNum_indels ( void  ) const
inline

Get the Num_indels member data.

Returns
Copy of the member data.

Definition at line 619 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::CanGetNum_indels(), CBlast4_simple_alignment_Base::m_Num_indels, and CSerialObject::ThrowUnassigned().

◆ GetNum_sequences()

CBlast4_database_info_Base::TNum_sequences CBlast4_database_info_Base::GetNum_sequences ( void  ) const
inline

Get the Num_sequences member data.

Returns
Copy of the member data.

Definition at line 636 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetNum_sequences(), CBlast4_database_info_Base::m_Num_sequences, and CSerialObject::ThrowUnassigned().

◆ GetParams() [1/2]

const CBlast4_finish_params_request_Base::TParams & CBlast4_finish_params_request_Base::GetParams ( void  ) const
inline

Get the Params member data.

Returns
Reference to the member data.

Definition at line 439 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::CanGetParams(), CBlast4_finish_params_request_Base::m_Params, and CSerialObject::ThrowUnassigned().

◆ GetParams() [2/2]

const CBlast4_get_databases_ex_request_Base::TParams & CBlast4_get_databases_ex_request_Base::GetParams ( void  ) const
inline

Get the Params member data.

Returns
Reference to the member data.

Definition at line 170 of file Blast_get_databa_ex_reques_.hpp.

References CBlast4_get_databases_ex_request_Base::CanGetParams(), CBlast4_get_databases_ex_request_Base::m_Params, and CSerialObject::ThrowUnassigned().

◆ GetParamset() [1/2]

const CBlast4_queue_search_request_Base::TParamset & CBlast4_queue_search_request_Base::GetParamset ( void  ) const
inline

Get the Paramset member data.

Returns
Reference to the member data.

Definition at line 625 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::CanGetParamset(), CBlast4_queue_search_request_Base::m_Paramset, and CSerialObject::ThrowUnassigned().

◆ GetParamset() [2/2]

const CBlast4_finish_params_request_Base::TParamset & CBlast4_finish_params_request_Base::GetParamset ( void  ) const
inline

Get the Paramset member data.

Returns
Reference to the member data.

Definition at line 392 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::CanGetParamset(), CBlast4_finish_params_request_Base::m_Paramset, and CSerialObject::ThrowUnassigned().

◆ GetPhi_alignments()

const CBlast4_get_search_results_reply_Base::TPhi_alignments & CBlast4_get_search_results_reply_Base::GetPhi_alignments ( void  ) const
inline

Get the Phi_alignments member data.

Returns
Reference to the member data.

Definition at line 425 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::CanGetPhi_alignments(), CBlast4_get_search_results_reply_Base::m_Phi_alignments, and CSerialObject::ThrowUnassigned().

◆ GetProgram() [1/4]

const CBlast4_program_info_Base::TProgram & CBlast4_program_info_Base::GetProgram ( void  ) const
inline

Get the Program member data.

Returns
Reference to the member data.

Definition at line 206 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::CanGetProgram(), CBlast4_program_info_Base::m_Program, and CSerialObject::ThrowUnassigned().

◆ GetProgram() [2/4]

const CBlast4_queue_search_request_Base::TProgram & CBlast4_queue_search_request_Base::GetProgram ( void  ) const
inline

◆ GetProgram() [3/4]

const CBlast4_finish_params_request_Base::TProgram & CBlast4_finish_params_request_Base::GetProgram ( void  ) const
inline

Get the Program member data.

Returns
Reference to the member data.

Definition at line 298 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::CanGetProgram(), CBlast4_finish_params_request_Base::m_Program, and CSerialObject::ThrowUnassigned().

◆ GetProgram() [4/4]

const CBlast4_get_request_info_reply_Base::TProgram & CBlast4_get_request_info_reply_Base::GetProgram ( void  ) const
inline

Get the Program member data.

Returns
Reference to the member data.

Definition at line 530 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::CanGetProgram(), CBlast4_get_request_info_reply_Base::m_Program, and CSerialObject::ThrowUnassigned().

◆ GetProgram_options() [1/2]

const CBlast4_queue_search_request_Base::TProgram_options & CBlast4_queue_search_request_Base::GetProgram_options ( void  ) const
inline

◆ GetProgram_options() [2/2]

const CBlast4_get_request_info_reply_Base::TProgram_options & CBlast4_get_request_info_reply_Base::GetProgram_options ( void  ) const
inline

Get the Program_options member data.

Returns
Reference to the member data.

Definition at line 731 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Program_options, and CBlast4_get_request_info_reply_Base::ResetProgram_options().

◆ GetPssm() [1/2]

const CBlast4_get_search_results_reply_Base::TPssm & CBlast4_get_search_results_reply_Base::GetPssm ( void  ) const
inline

Get the Pssm member data.

Returns
Reference to the member data.

Definition at line 521 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::CanGetPssm(), CBlast4_get_search_results_reply_Base::m_Pssm, and CSerialObject::ThrowUnassigned().

◆ GetPssm() [2/2]

const CBlast4_queries_Base::TPssm & CBlast4_queries_Base::GetPssm ( void  ) const

◆ GetQueries() [1/3]

const CBlast4_get_queries_reply_Base::TQueries & CBlast4_get_queries_reply_Base::GetQueries ( void  ) const
inline

Get the Queries member data.

Returns
Reference to the member data.

Definition at line 170 of file Blast4_get_queries_reply_.hpp.

References CBlast4_get_queries_reply_Base::m_Queries, and CBlast4_get_queries_reply_Base::ResetQueries().

◆ GetQueries() [2/3]

const CBlast4_queue_search_request_Base::TQueries & CBlast4_queue_search_request_Base::GetQueries ( void  ) const
inline

Get the Queries member data.

Returns
Reference to the member data.

Definition at line 565 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Queries, and CBlast4_queue_search_request_Base::ResetQueries().

Referenced by BOOST_AUTO_TEST_CASE(), and CMultiAligner::x_SetDomainHits().

◆ GetQueries() [3/3]

const CBlast4_get_request_info_reply_Base::TQueries & CBlast4_get_request_info_reply_Base::GetQueries ( void  ) const
inline

Get the Queries member data.

Returns
Reference to the member data.

Definition at line 671 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Queries, and CBlast4_get_request_info_reply_Base::ResetQueries().

◆ GetQuery_id()

const CBlast4_alignments_for_query_Base::TQuery_id & CBlast4_alignments_for_query_Base::GetQuery_id ( void  ) const
inline

Get the Query_id member data.

Returns
Reference to the member data.

Definition at line 214 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::CanGetQuery_id(), CBlast4_alignments_for_query_Base::m_Query_id, and CSerialObject::ThrowUnassigned().

◆ GetQuery_mask()

const CBlast4_value_Base::TQuery_mask & CBlast4_value_Base::GetQuery_mask ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 437 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Query_mask, and CBlast4_value_Base::m_object.

Referenced by CBlast4Field::GetQueryMask(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetQueue_search() [1/2]

const CBlast4_reply_body_Base::TQueue_search & CBlast4_reply_body_Base::GetQueue_search ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 362 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::e_Queue_search, and CBlast4_reply_body_Base::m_object.

◆ GetQueue_search() [2/2]

const CBlast4_request_body_Base::TQueue_search & CBlast4_request_body_Base::GetQueue_search ( void  ) const

◆ GetRaw_score()

CBlast4_cutoff_Base::TRaw_score CBlast4_cutoff_Base::GetRaw_score ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 329 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::CheckSelected(), CBlast4_cutoff_Base::e_Raw_score, and CBlast4_cutoff_Base::m_Raw_score.

◆ GetReal()

CBlast4_value_Base::TReal CBlast4_value_Base::GetReal ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 1041 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Real, and CBlast4_value_Base::m_Real.

Referenced by CBlast4Field::GetReal(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetReal_list()

const CBlast4_value_Base::TReal_list & CBlast4_value_Base::GetReal_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1253 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Real_list, and CBlast4_value_Base::m_Real_list.

◆ GetRequest()

const CBlast4_archive_Base::TRequest & CBlast4_archive_Base::GetRequest ( void  ) const
inline

Get the Request member data.

Returns
Reference to the member data.

Definition at line 254 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Request, and CBlast4_archive_Base::ResetRequest().

Referenced by BOOST_AUTO_TEST_CASE(), and CMultiAligner::x_SetDomainHits().

◆ GetRequest_id() [1/7]

const CBlast4_get_search_results_request_Base::TRequest_id & CBlast4_get_search_results_request_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 213 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::CanGetRequest_id(), CBlast4_get_search_results_request_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetRequest_id() [2/7]

const CBlast4_get_search_status_request_Base::TRequest_id & CBlast4_get_search_status_request_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 172 of file Blas_get_searc_statu_reque_.hpp.

References CBlast4_get_search_status_request_Base::CanGetRequest_id(), CBlast4_get_search_status_request_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetRequest_id() [3/7]

const CBlast4_get_search_strategy_request_Base::TRequest_id & CBlast4_get_search_strategy_request_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 172 of file Blas_get_searc_strat_reque_.hpp.

References CBlast4_get_search_strategy_request_Base::CanGetRequest_id(), CBlast4_get_search_strategy_request_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetRequest_id() [4/7]

const CBlast4_queue_search_reply_Base::TRequest_id & CBlast4_queue_search_reply_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 171 of file Blast4_queue_search_reply_.hpp.

References CBlast4_queue_search_reply_Base::CanGetRequest_id(), CBlast4_queue_search_reply_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetRequest_id() [5/7]

const CBlast4_get_request_info_request_Base::TRequest_id & CBlast4_get_request_info_request_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 172 of file Blast_get_reque_info_reque_.hpp.

References CBlast4_get_request_info_request_Base::CanGetRequest_id(), CBlast4_get_request_info_request_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetRequest_id() [6/7]

const CBlast4_get_search_info_reply_Base::TRequest_id & CBlast4_get_search_info_reply_Base::GetRequest_id ( void  ) const
inline

◆ GetRequest_id() [7/7]

const CBlast4_get_search_info_request_Base::TRequest_id & CBlast4_get_search_info_request_Base::GetRequest_id ( void  ) const
inline

Get the Request_id member data.

Returns
Reference to the member data.

Definition at line 216 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::CanGetRequest_id(), CBlast4_get_search_info_request_Base::m_Request_id, and CSerialObject::ThrowUnassigned().

◆ GetResidue_type()

CBlast4_matrix_id_Base::TResidue_type CBlast4_matrix_id_Base::GetResidue_type ( void  ) const
inline

Get the Residue_type member data.

Returns
Copy of the member data.

Definition at line 219 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::CanGetResidue_type(), CBlast4_matrix_id_Base::m_Residue_type, and CSerialObject::ThrowUnassigned().

◆ GetResult_types()

CBlast4_get_search_results_request_Base::TResult_types CBlast4_get_search_results_request_Base::GetResult_types ( void  ) const
inline

◆ GetResults()

const CBlast4_archive_Base::TResults & CBlast4_archive_Base::GetResults ( void  ) const
inline

Get the Results member data.

Returns
Reference to the member data.

Definition at line 284 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Results, and CBlast4_archive_Base::ResetResults().

Referenced by BOOST_AUTO_TEST_CASE(), and CMultiAligner::x_SetDomainHits().

◆ GetSearch_stats()

const CBlast4_get_search_results_reply_Base::TSearch_stats & CBlast4_get_search_results_reply_Base::GetSearch_stats ( void  ) const
inline

Get the Search_stats member data.

Returns
Reference to the member data.

Definition at line 496 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Search_stats.

◆ GetSeq_align()

const CBlast4_value_Base::TSeq_align & CBlast4_value_Base::GetSeq_align ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 321 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_align, and CBlast4_value_Base::m_object.

◆ GetSeq_align_list()

const CBlast4_value_Base::TSeq_align_list & CBlast4_value_Base::GetSeq_align_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1273 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_align_list, and CBlast4_value_Base::m_Seq_align_list.

◆ GetSeq_align_set()

const CBlast4_value_Base::TSeq_align_set & CBlast4_value_Base::GetSeq_align_set ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 415 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_align_set, and CBlast4_value_Base::m_object.

◆ GetSeq_id()

const CBlast4_value_Base::TSeq_id & CBlast4_value_Base::GetSeq_id ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 343 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_id, and CBlast4_value_Base::m_object.

◆ GetSeq_id_list()

const CBlast4_value_Base::TSeq_id_list & CBlast4_value_Base::GetSeq_id_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1293 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_id_list, and CBlast4_value_Base::m_Seq_id_list.

◆ GetSeq_ids()

const CBlast4_get_sequences_request_Base::TSeq_ids & CBlast4_get_sequences_request_Base::GetSeq_ids ( void  ) const
inline

Get the Seq_ids member data.

Returns
Reference to the member data.

Definition at line 330 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Seq_ids.

◆ GetSeq_loc()

const CBlast4_value_Base::TSeq_loc & CBlast4_value_Base::GetSeq_loc ( void  ) const

Get the variant data.

Returns
Reference to the data.

Definition at line 365 of file Blast4_value_.cpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_loc, and CBlast4_value_Base::m_object.

◆ GetSeq_loc_list() [1/3]

const CBlast4_queries_Base::TSeq_loc_list & CBlast4_queries_Base::GetSeq_loc_list ( void  ) const
inline

◆ GetSeq_loc_list() [2/3]

const CBlast4_subject_Base::TSeq_loc_list & CBlast4_subject_Base::GetSeq_loc_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 332 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::CheckSelected(), CBlast4_subject_Base::e_Seq_loc_list, and CBlast4_subject_Base::m_Seq_loc_list.

◆ GetSeq_loc_list() [3/3]

const CBlast4_value_Base::TSeq_loc_list & CBlast4_value_Base::GetSeq_loc_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1313 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Seq_loc_list, and CBlast4_value_Base::m_Seq_loc_list.

◆ GetSeq_locations()

const CBlast4_get_seq_parts_request_Base::TSeq_locations & CBlast4_get_seq_parts_request_Base::GetSeq_locations ( void  ) const
inline

Get the Seq_locations member data.

Returns
Reference to the member data.

Definition at line 246 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_Seq_locations.

◆ GetSeq_locs()

const CBlast4_phi_alignments_Base::TSeq_locs & CBlast4_phi_alignments_Base::GetSeq_locs ( void  ) const
inline

Get the Seq_locs member data.

Returns
Reference to the member data.

Definition at line 255 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_Seq_locs.

◆ GetSeqtech()

CBlast4_database_info_Base::TSeqtech CBlast4_database_info_Base::GetSeqtech ( void  ) const
inline

Get the Seqtech member data.

Returns
Copy of the member data.

Definition at line 683 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetSeqtech(), CBlast4_database_info_Base::m_Seqtech, and CSerialObject::ThrowUnassigned().

◆ GetSequences()

const CBlast4_subject_Base::TSequences & CBlast4_subject_Base::GetSequences ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 312 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::CheckSelected(), CBlast4_subject_Base::e_Sequences, and CBlast4_subject_Base::m_Sequences.

Referenced by s_ImportSubjects().

◆ GetService() [1/3]

const CBlast4_queue_search_request_Base::TService & CBlast4_queue_search_request_Base::GetService ( void  ) const
inline

◆ GetService() [2/3]

const CBlast4_finish_params_request_Base::TService & CBlast4_finish_params_request_Base::GetService ( void  ) const
inline

Get the Service member data.

Returns
Reference to the member data.

Definition at line 345 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::CanGetService(), CBlast4_finish_params_request_Base::m_Service, and CSerialObject::ThrowUnassigned().

◆ GetService() [3/3]

const CBlast4_get_request_info_reply_Base::TService & CBlast4_get_request_info_reply_Base::GetService ( void  ) const
inline

Get the Service member data.

Returns
Reference to the member data.

Definition at line 577 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::CanGetService(), CBlast4_get_request_info_reply_Base::m_Service, and CSerialObject::ThrowUnassigned().

◆ GetServices()

const CBlast4_program_info_Base::TServices & CBlast4_program_info_Base::GetServices ( void  ) const
inline

Get the Services member data.

Returns
Reference to the member data.

Definition at line 253 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::m_Services.

◆ GetSimple_results()

const CBlast4_get_search_results_reply_Base::TSimple_results & CBlast4_get_search_results_reply_Base::GetSimple_results ( void  ) const
inline

Get the Simple_results member data.

Returns
Reference to the member data.

Definition at line 542 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::CanGetSimple_results(), CBlast4_get_search_results_reply_Base::m_Simple_results, and CSerialObject::ThrowUnassigned().

◆ GetSkip_seq_data()

CBlast4_get_sequences_request_Base::TSkip_seq_data CBlast4_get_sequences_request_Base::GetSkip_seq_data ( void  ) const
inline

Get the Skip_seq_data member data.

Returns
Copy of the member data.

Definition at line 368 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Skip_seq_data.

◆ GetStart()

CBlast4_range_Base::TStart CBlast4_range_Base::GetStart ( void  ) const
inline

Get the Start member data.

Returns
Copy of the member data.

Definition at line 256 of file Blast4_range_.hpp.

References CBlast4_range_Base::CanGetStart(), CBlast4_range_Base::m_Start, and CSerialObject::ThrowUnassigned().

Referenced by CBlast4_range::operator TSeqRange().

◆ GetStatus()

const CBlast4_get_search_status_reply_Base::TStatus & CBlast4_get_search_status_reply_Base::GetStatus ( void  ) const
inline

Get the Status member data.

Returns
Reference to the member data.

Definition at line 172 of file Blas_get_searc_statu_reply_.hpp.

References CBlast4_get_search_status_reply_Base::CanGetStatus(), CBlast4_get_search_status_reply_Base::m_Status, and CSerialObject::ThrowUnassigned().

◆ GetStrand()

CBlast4_range_Base::TStrand CBlast4_range_Base::GetStrand ( void  ) const
inline

Get the Strand member data.

Returns
Copy of the member data.

Definition at line 350 of file Blast4_range_.hpp.

References CBlast4_range_Base::CanGetStrand(), CBlast4_range_Base::m_Strand, and CSerialObject::ThrowUnassigned().

◆ GetStrand_type()

CBlast4_value_Base::TStrand_type CBlast4_value_Base::GetStrand_type ( void  ) const
inline

Get the variant data.

Returns
Copy of the variant data.

Definition at line 1086 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Strand_type, and CBlast4_value_Base::m_Strand_type.

Referenced by CBlast4Field::GetStrandType(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetStrand_type_list()

const CBlast4_value_Base::TStrand_type_list & CBlast4_value_Base::GetStrand_type_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1333 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_Strand_type_list, and CBlast4_value_Base::m_Strand_type_list.

◆ GetString()

const CBlast4_value_Base::TString & CBlast4_value_Base::GetString ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1113 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_String, and CBlast4_value_Base::m_string.

Referenced by CBlast4Field::GetString(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ GetString_list()

const CBlast4_value_Base::TString_list & CBlast4_value_Base::GetString_list ( void  ) const
inline

Get the variant data.

Returns
Reference to the data.

Definition at line 1353 of file Blast4_value_.hpp.

References CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::e_String_list, and CBlast4_value_Base::m_String_list.

◆ GetSubject()

const CBlast4_queue_search_request_Base::TSubject & CBlast4_queue_search_request_Base::GetSubject ( void  ) const
inline

Get the Subject member data.

Returns
Reference to the member data.

Definition at line 595 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Subject, and CBlast4_queue_search_request_Base::ResetSubject().

Referenced by BOOST_AUTO_TEST_CASE().

◆ GetSubject_id()

const CBlast4_simple_alignment_Base::TSubject_id & CBlast4_simple_alignment_Base::GetSubject_id ( void  ) const
inline

Get the Subject_id member data.

Returns
Reference to the member data.

Definition at line 424 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::CanGetSubject_id(), CBlast4_simple_alignment_Base::m_Subject_id, and CSerialObject::ThrowUnassigned().

◆ GetSubjects()

const CBlast4_get_request_info_reply_Base::TSubjects & CBlast4_get_request_info_reply_Base::GetSubjects ( void  ) const
inline

Get the Subjects member data.

Returns
Reference to the member data.

Definition at line 782 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::CanGetSubjects(), CBlast4_get_request_info_reply_Base::m_Subjects, and CSerialObject::ThrowUnassigned().

◆ GetTarget_only()

CBlast4_get_sequences_request_Base::TTarget_only CBlast4_get_sequences_request_Base::GetTarget_only ( void  ) const
inline

Get the Target_only member data.

Returns
Copy of the member data.

Definition at line 412 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::CanGetTarget_only(), CBlast4_get_sequences_request_Base::m_Target_only, and CSerialObject::ThrowUnassigned().

◆ GetTaxid()

CBlast4_database_info_Base::TTaxid CBlast4_database_info_Base::GetTaxid ( void  ) const
inline

Get the Taxid member data.

Returns
Copy of the member data.

Definition at line 730 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetTaxid(), CBlast4_database_info_Base::m_Taxid, and CSerialObject::ThrowUnassigned().

◆ GetTotal_length()

CBlast4_database_info_Base::TTotal_length CBlast4_database_info_Base::GetTotal_length ( void  ) const
inline

Get the Total_length member data.

Returns
Copy of the member data.

Definition at line 589 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::CanGetTotal_length(), CBlast4_database_info_Base::m_Total_length, and CSerialObject::ThrowUnassigned().

◆ GetType() [1/2]

CBlast4_database_Base::TType CBlast4_database_Base::GetType ( void  ) const
inline

Get the Type member data.

Returns
Copy of the member data.

Definition at line 266 of file Blast4_database_.hpp.

References CBlast4_database_Base::CanGetType(), CBlast4_database_Base::m_Type, and CSerialObject::ThrowUnassigned().

Referenced by BOOST_AUTO_TEST_CASE(), CBlast4_database::IsProtein(), and CBlast4_database::operator==().

◆ GetType() [2/2]

const CBlast4_parameter_info_Base::TType & CBlast4_parameter_info_Base::GetType ( void  ) const
inline

Get the Type member data.

Returns
Reference to the member data.

Definition at line 259 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::CanGetType(), CBlast4_parameter_info_Base::m_Type, and CSerialObject::ThrowUnassigned().

◆ GetValue()

const CBlast4_parameter_Base::TValue & CBlast4_parameter_Base::GetValue ( void  ) const
inline

◆ IsBig_integer()

bool CBlast4_value_Base::IsBig_integer ( void  ) const
inline

Check if variant Big_integer is selected.

Big_integer type is defined as 'typedef Int8 TBig_integer'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 936 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Big_integer, and CBlast4_value_Base::m_choice.

◆ IsBig_integer_list()

bool CBlast4_value_Base::IsBig_integer_list ( void  ) const
inline

Check if variant Big_integer_list is selected.

Big_integer_list type is defined as 'typedef list< Int8 > TBig_integer_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1127 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Big_integer_list, and CBlast4_value_Base::m_choice.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ IsBioseq()

bool CBlast4_value_Base::IsBioseq ( void  ) const
inline

Check if variant Bioseq is selected.

Bioseq type is defined as 'typedef CBioseq TBioseq'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 963 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Bioseq, and CBlast4_value_Base::m_choice.

◆ IsBioseq_list()

bool CBlast4_value_Base::IsBioseq_list ( void  ) const
inline

Check if variant Bioseq_list is selected.

Bioseq_list type is defined as 'typedef list< CRef< CBioseq > > TBioseq_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1147 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Bioseq_list, and CBlast4_value_Base::m_choice.

◆ IsBioseq_set() [1/2]

bool CBlast4_queries_Base::IsBioseq_set ( void  ) const
inline

Check if variant Bioseq_set is selected.

Bioseq_set type is defined as 'typedef CBioseq_set TBioseq_set'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 320 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::e_Bioseq_set, and CBlast4_queries_Base::m_choice.

Referenced by CGBProjectHelper::AddProjectItemsFromRID(), BOOST_AUTO_TEST_CASE(), s_ImportQueries(), CBlastFormatterApp::x_ExtractQueries(), CBlastFormatterVdbApp::x_ExtractQueries(), CRemoteBlast::x_ExtractQueryIds(), and CMultiAligner::x_SetDomainHits().

◆ IsBioseq_set() [2/2]

bool CBlast4_value_Base::IsBioseq_set ( void  ) const
inline

Check if variant Bioseq_set is selected.

Bioseq_set type is defined as 'typedef CBioseq_set TBioseq_set'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1367 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Bioseq_set, and CBlast4_value_Base::m_choice.

◆ IsBoolean()

bool CBlast4_value_Base::IsBoolean ( void  ) const
inline

Check if variant Boolean is selected.

Boolean type is defined as 'typedef bool TBoolean'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 969 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Boolean, and CBlast4_value_Base::m_choice.

◆ IsBoolean_list()

bool CBlast4_value_Base::IsBoolean_list ( void  ) const
inline

Check if variant Boolean_list is selected.

Boolean_list type is defined as 'typedef list< bool > TBoolean_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1167 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Boolean_list, and CBlast4_value_Base::m_choice.

◆ IsCutoff()

bool CBlast4_value_Base::IsCutoff ( void  ) const
inline

Check if variant Cutoff is selected.

Cutoff type is defined as 'typedef CBlast4_cutoff TCutoff'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 996 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Cutoff, and CBlast4_value_Base::m_choice.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ IsCutoff_list()

bool CBlast4_value_Base::IsCutoff_list ( void  ) const
inline

Check if variant Cutoff_list is selected.

Cutoff_list type is defined as 'typedef list< CRef< CBlast4_cutoff > > TCutoff_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1187 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Cutoff_list, and CBlast4_value_Base::m_choice.

◆ IsDatabase()

bool CBlast4_subject_Base::IsDatabase ( void  ) const
inline

Check if variant Database is selected.

Database type is defined as 'typedef string TDatabase'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 286 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::e_Database, and CBlast4_subject_Base::m_choice.

Referenced by s_ImportDatabase(), and s_ImportSearchStrategy().

◆ IsE_value()

bool CBlast4_cutoff_Base::IsE_value ( void  ) const
inline

Check if variant E_value is selected.

E_value type is defined as 'typedef double TE_value'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 296 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_E_value, and CBlast4_cutoff_Base::m_choice.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ IsFinish_params() [1/2]

bool CBlast4_reply_body_Base::IsFinish_params ( void  ) const
inline

Check if variant Finish_params is selected.

Finish_params type is defined as 'typedef CBlast4_finish_params_reply TFinish_params'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 663 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Finish_params, and CBlast4_reply_body_Base::m_choice.

◆ IsFinish_params() [2/2]

bool CBlast4_request_body_Base::IsFinish_params ( void  ) const
inline

Check if variant Finish_params is selected.

Finish_params type is defined as 'typedef CBlast4_finish_params_request TFinish_params'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 534 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Finish_params, and CBlast4_request_body_Base::m_choice.

◆ IsGet_databases() [1/2]

bool CBlast4_reply_body_Base::IsGet_databases ( void  ) const
inline

Check if variant Get_databases is selected.

Get_databases type is defined as 'typedef CBlast4_get_databases_reply TGet_databases'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 669 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_databases, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_databases() [2/2]

bool CBlast4_request_body_Base::IsGet_databases ( void  ) const
inline

Check if variant Get_databases is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 540 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_databases, and CBlast4_request_body_Base::m_choice.

◆ IsGet_databases_ex() [1/2]

bool CBlast4_reply_body_Base::IsGet_databases_ex ( void  ) const
inline

Check if variant Get_databases_ex is selected.

Get_databases_ex type is defined as 'typedef CBlast4_get_databases_ex_reply TGet_databases_ex'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 753 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_databases_ex, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_databases_ex() [2/2]

bool CBlast4_request_body_Base::IsGet_databases_ex ( void  ) const
inline

Check if variant Get_databases_ex is selected.

Get_databases_ex type is defined as 'typedef CBlast4_get_databases_ex_request TGet_databases_ex'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 654 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_databases_ex, and CBlast4_request_body_Base::m_choice.

◆ IsGet_matrices() [1/2]

bool CBlast4_reply_body_Base::IsGet_matrices ( void  ) const
inline

Check if variant Get_matrices is selected.

Get_matrices type is defined as 'typedef CBlast4_get_matrices_reply TGet_matrices'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 675 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_matrices, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_matrices() [2/2]

bool CBlast4_request_body_Base::IsGet_matrices ( void  ) const
inline

Check if variant Get_matrices is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 552 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_matrices, and CBlast4_request_body_Base::m_choice.

◆ IsGet_parameters() [1/2]

bool CBlast4_reply_body_Base::IsGet_parameters ( void  ) const
inline

Check if variant Get_parameters is selected.

Get_parameters type is defined as 'typedef CBlast4_get_parameters_reply TGet_parameters'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 681 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_parameters, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_parameters() [2/2]

bool CBlast4_request_body_Base::IsGet_parameters ( void  ) const
inline

Check if variant Get_parameters is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 564 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_parameters, and CBlast4_request_body_Base::m_choice.

◆ IsGet_paramsets() [1/2]

bool CBlast4_reply_body_Base::IsGet_paramsets ( void  ) const
inline

Check if variant Get_paramsets is selected.

Get_paramsets type is defined as 'typedef CBlast4_get_paramsets_reply TGet_paramsets'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 687 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_paramsets, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_paramsets() [2/2]

bool CBlast4_request_body_Base::IsGet_paramsets ( void  ) const
inline

Check if variant Get_paramsets is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 576 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_paramsets, and CBlast4_request_body_Base::m_choice.

◆ IsGet_programs() [1/2]

bool CBlast4_reply_body_Base::IsGet_programs ( void  ) const
inline

Check if variant Get_programs is selected.

Get_programs type is defined as 'typedef CBlast4_get_programs_reply TGet_programs'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 693 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_programs, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_programs() [2/2]

bool CBlast4_request_body_Base::IsGet_programs ( void  ) const
inline

Check if variant Get_programs is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 588 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_programs, and CBlast4_request_body_Base::m_choice.

◆ IsGet_protocol_info() [1/2]

bool CBlast4_reply_body_Base::IsGet_protocol_info ( void  ) const
inline

Check if variant Get_protocol_info is selected.

Get_protocol_info type is defined as 'typedef CBlast4_get_protocol_info_reply TGet_protocol_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 741 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_protocol_info, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_protocol_info() [2/2]

bool CBlast4_request_body_Base::IsGet_protocol_info ( void  ) const
inline

Check if variant Get_protocol_info is selected.

Get_protocol_info type is defined as 'typedef CBlast4_get_protocol_info_request TGet_protocol_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 642 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_protocol_info, and CBlast4_request_body_Base::m_choice.

◆ IsGet_queries()

bool CBlast4_reply_body_Base::IsGet_queries ( void  ) const
inline

Check if variant Get_queries is selected.

Get_queries type is defined as 'typedef CBlast4_get_queries_reply TGet_queries'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 717 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_queries, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_request_info() [1/2]

bool CBlast4_reply_body_Base::IsGet_request_info ( void  ) const
inline

Check if variant Get_request_info is selected.

Get_request_info type is defined as 'typedef CBlast4_get_request_info_reply TGet_request_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 723 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_request_info, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_request_info() [2/2]

bool CBlast4_request_body_Base::IsGet_request_info ( void  ) const
inline

Check if variant Get_request_info is selected.

Get_request_info type is defined as 'typedef CBlast4_get_request_info_request TGet_request_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 618 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_request_info, and CBlast4_request_body_Base::m_choice.

◆ IsGet_search_info() [1/2]

bool CBlast4_reply_body_Base::IsGet_search_info ( void  ) const
inline

Check if variant Get_search_info is selected.

Get_search_info type is defined as 'typedef CBlast4_get_search_info_reply TGet_search_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 747 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_search_info, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_search_info() [2/2]

bool CBlast4_request_body_Base::IsGet_search_info ( void  ) const
inline

Check if variant Get_search_info is selected.

Get_search_info type is defined as 'typedef CBlast4_get_search_info_request TGet_search_info'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 648 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_search_info, and CBlast4_request_body_Base::m_choice.

◆ IsGet_search_results() [1/2]

bool CBlast4_reply_body_Base::IsGet_search_results ( void  ) const
inline

Check if variant Get_search_results is selected.

Get_search_results type is defined as 'typedef CBlast4_get_search_results_reply TGet_search_results'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 699 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_search_results, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_search_results() [2/2]

bool CBlast4_request_body_Base::IsGet_search_results ( void  ) const
inline

Check if variant Get_search_results is selected.

Get_search_results type is defined as 'typedef CBlast4_get_search_results_request TGet_search_results'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 600 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_search_results, and CBlast4_request_body_Base::m_choice.

◆ IsGet_sequence_parts() [1/2]

bool CBlast4_reply_body_Base::IsGet_sequence_parts ( void  ) const
inline

Check if variant Get_sequence_parts is selected.

Get_sequence_parts type is defined as 'typedef CBlast4_get_seq_parts_reply TGet_sequence_parts'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 729 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_sequence_parts, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_sequence_parts() [2/2]

bool CBlast4_request_body_Base::IsGet_sequence_parts ( void  ) const
inline

Check if variant Get_sequence_parts is selected.

Get_sequence_parts type is defined as 'typedef CBlast4_get_seq_parts_request TGet_sequence_parts'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 624 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_sequence_parts, and CBlast4_request_body_Base::m_choice.

◆ IsGet_sequences() [1/2]

bool CBlast4_reply_body_Base::IsGet_sequences ( void  ) const
inline

Check if variant Get_sequences is selected.

Get_sequences type is defined as 'typedef CBlast4_get_sequences_reply TGet_sequences'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 705 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_sequences, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_sequences() [2/2]

bool CBlast4_request_body_Base::IsGet_sequences ( void  ) const
inline

Check if variant Get_sequences is selected.

Get_sequences type is defined as 'typedef CBlast4_get_sequences_request TGet_sequences'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 606 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_sequences, and CBlast4_request_body_Base::m_choice.

◆ IsGet_windowmasked_taxids() [1/2]

bool CBlast4_reply_body_Base::IsGet_windowmasked_taxids ( void  ) const
inline

Check if variant Get_windowmasked_taxids is selected.

Get_windowmasked_taxids type is defined as 'typedef CBlast4_get_windowmasked_taxids_reply TGet_windowmasked_taxids'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 735 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Get_windowmasked_taxids, and CBlast4_reply_body_Base::m_choice.

◆ IsGet_windowmasked_taxids() [2/2]

bool CBlast4_request_body_Base::IsGet_windowmasked_taxids ( void  ) const
inline

Check if variant Get_windowmasked_taxids is selected.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 630 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Get_windowmasked_taxids, and CBlast4_request_body_Base::m_choice.

◆ IsInteger()

bool CBlast4_value_Base::IsInteger ( void  ) const
inline

Check if variant Integer is selected.

Integer type is defined as 'typedef int TInteger'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1002 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Integer, and CBlast4_value_Base::m_choice.

◆ IsInteger_list()

bool CBlast4_value_Base::IsInteger_list ( void  ) const
inline

Check if variant Integer_list is selected.

Integer_list type is defined as 'typedef list< int > TInteger_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1207 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Integer_list, and CBlast4_value_Base::m_choice.

◆ IsMatrix()

bool CBlast4_value_Base::IsMatrix ( void  ) const
inline

Check if variant Matrix is selected.

Matrix type is defined as 'typedef CPssmWithParameters TMatrix'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1029 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Matrix, and CBlast4_value_Base::m_choice.

◆ IsMatrix_list()

bool CBlast4_value_Base::IsMatrix_list ( void  ) const
inline

Check if variant Matrix_list is selected.

Matrix_list type is defined as 'typedef list< CRef< CPssmWithParameters > > TMatrix_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1227 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Matrix_list, and CBlast4_value_Base::m_choice.

◆ IsPssm()

bool CBlast4_queries_Base::IsPssm ( void  ) const
inline

Check if variant Pssm is selected.

Pssm type is defined as 'typedef CPssmWithParameters TPssm'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 294 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::e_Pssm, and CBlast4_queries_Base::m_choice.

Referenced by BOOST_AUTO_TEST_CASE(), s_ImportSearchStrategy(), CBlastFormatterApp::x_ExtractQueries(), CBlastFormatterVdbApp::x_ExtractQueries(), and CRemoteBlast::x_ExtractQueryIds().

◆ IsQuery_mask()

bool CBlast4_value_Base::IsQuery_mask ( void  ) const
inline

Check if variant Query_mask is selected.

Query_mask type is defined as 'typedef CBlast4_mask TQuery_mask'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1379 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Query_mask, and CBlast4_value_Base::m_choice.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ IsQueue_search() [1/2]

bool CBlast4_reply_body_Base::IsQueue_search ( void  ) const
inline

Check if variant Queue_search is selected.

Queue_search type is defined as 'typedef CBlast4_queue_search_reply TQueue_search'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 711 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::e_Queue_search, and CBlast4_reply_body_Base::m_choice.

◆ IsQueue_search() [2/2]

bool CBlast4_request_body_Base::IsQueue_search ( void  ) const
inline

Check if variant Queue_search is selected.

Queue_search type is defined as 'typedef CBlast4_queue_search_request TQueue_search'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 612 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::e_Queue_search, and CBlast4_request_body_Base::m_choice.

Referenced by BOOST_AUTO_TEST_CASE(), and s_BuildArchiveAll().

◆ IsRaw_score()

bool CBlast4_cutoff_Base::IsRaw_score ( void  ) const
inline

Check if variant Raw_score is selected.

Raw_score type is defined as 'typedef int TRaw_score'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 323 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_Raw_score, and CBlast4_cutoff_Base::m_choice.

◆ IsReal()

bool CBlast4_value_Base::IsReal ( void  ) const
inline

Check if variant Real is selected.

Real type is defined as 'typedef double TReal'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1035 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Real, and CBlast4_value_Base::m_choice.

Referenced by CBlastOptionsBuilder::x_ProcessOneOption().

◆ IsReal_list()

bool CBlast4_value_Base::IsReal_list ( void  ) const
inline

Check if variant Real_list is selected.

Real_list type is defined as 'typedef list< double > TReal_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1247 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Real_list, and CBlast4_value_Base::m_choice.

◆ IsSeq_align()

bool CBlast4_value_Base::IsSeq_align ( void  ) const
inline

Check if variant Seq_align is selected.

Seq_align type is defined as 'typedef CSeq_align TSeq_align'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1062 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_align, and CBlast4_value_Base::m_choice.

◆ IsSeq_align_list()

bool CBlast4_value_Base::IsSeq_align_list ( void  ) const
inline

Check if variant Seq_align_list is selected.

Seq_align_list type is defined as 'typedef list< CRef< CSeq_align > > TSeq_align_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1267 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_align_list, and CBlast4_value_Base::m_choice.

◆ IsSeq_align_set()

bool CBlast4_value_Base::IsSeq_align_set ( void  ) const
inline

Check if variant Seq_align_set is selected.

Seq_align_set type is defined as 'typedef CSeq_align_set TSeq_align_set'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1373 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_align_set, and CBlast4_value_Base::m_choice.

◆ IsSeq_id()

bool CBlast4_value_Base::IsSeq_id ( void  ) const
inline

Check if variant Seq_id is selected.

Seq_id type is defined as 'typedef CSeq_id TSeq_id'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1068 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_id, and CBlast4_value_Base::m_choice.

◆ IsSeq_id_list()

bool CBlast4_value_Base::IsSeq_id_list ( void  ) const
inline

Check if variant Seq_id_list is selected.

Seq_id_list type is defined as 'typedef list< CRef< CSeq_id > > TSeq_id_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1287 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_id_list, and CBlast4_value_Base::m_choice.

◆ IsSeq_loc()

bool CBlast4_value_Base::IsSeq_loc ( void  ) const
inline

Check if variant Seq_loc is selected.

Seq_loc type is defined as 'typedef CSeq_loc TSeq_loc'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1074 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_loc, and CBlast4_value_Base::m_choice.

◆ IsSeq_loc_list() [1/3]

bool CBlast4_queries_Base::IsSeq_loc_list ( void  ) const
inline

Check if variant Seq_loc_list is selected.

Seq_loc_list type is defined as 'typedef list< CRef< CSeq_loc > > TSeq_loc_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 300 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::e_Seq_loc_list, and CBlast4_queries_Base::m_choice.

Referenced by CGBProjectHelper::AddProjectItemsFromRID(), BOOST_AUTO_TEST_CASE(), s_ImportQueries(), CBlastFormatterApp::x_ExtractQueries(), CBlastFormatterVdbApp::x_ExtractQueries(), CRemoteBlast::x_ExtractQueryIds(), and CMultiAligner::x_SetDomainHits().

◆ IsSeq_loc_list() [2/3]

bool CBlast4_subject_Base::IsSeq_loc_list ( void  ) const
inline

Check if variant Seq_loc_list is selected.

Seq_loc_list type is defined as 'typedef list< CRef< CSeq_loc > > TSeq_loc_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 326 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::e_Seq_loc_list, and CBlast4_subject_Base::m_choice.

◆ IsSeq_loc_list() [3/3]

bool CBlast4_value_Base::IsSeq_loc_list ( void  ) const
inline

Check if variant Seq_loc_list is selected.

Seq_loc_list type is defined as 'typedef list< CRef< CSeq_loc > > TSeq_loc_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1307 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_loc_list, and CBlast4_value_Base::m_choice.

◆ IsSequences()

bool CBlast4_subject_Base::IsSequences ( void  ) const
inline

Check if variant Sequences is selected.

Sequences type is defined as 'typedef list< CRef< CBioseq > > TSequences'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 306 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::e_Sequences, and CBlast4_subject_Base::m_choice.

Referenced by BOOST_AUTO_TEST_CASE(), and s_ImportSubjects().

◆ IsSet() [1/10]

bool CBlast4_get_windowmasked_taxids_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef set< int > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 148 of file Blas_get_windo_taxid_reply_.hpp.

References CBlast4_get_windowmasked_taxids_reply_Base::m_set_State.

◆ IsSet() [2/10]

bool CBlast4_get_databases_ex_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_database_info > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_databa_ex_reply_.hpp.

References CBlast4_get_databases_ex_reply_Base::m_set_State.

◆ IsSet() [3/10]

bool CBlast4_get_databases_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_database_info > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_databases_reply_.hpp.

References CBlast4_get_databases_reply_Base::m_set_State.

◆ IsSet() [4/10]

bool CBlast4_get_matrices_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_matrix_id > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_matrices_reply_.hpp.

References CBlast4_get_matrices_reply_Base::m_set_State.

◆ IsSet() [5/10]

bool CBlast4_get_parameters_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_parameter_info > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_parameter_reply_.hpp.

References CBlast4_get_parameters_reply_Base::m_set_State.

◆ IsSet() [6/10]

bool CBlast4_get_paramsets_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_task_info > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 155 of file Blast4_get_paramsets_reply_.hpp.

References CBlast4_get_paramsets_reply_Base::m_set_State.

◆ IsSet() [7/10]

bool CBlast4_get_programs_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_program_info > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_programs_reply_.hpp.

References CBlast4_get_programs_reply_Base::m_set_State.

◆ IsSet() [8/10]

bool CBlast4_get_seq_parts_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_seq_part_data > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_seq_parts_reply_.hpp.

References CBlast4_get_seq_parts_reply_Base::m_set_State.

◆ IsSet() [9/10]

bool CBlast4_get_sequences_reply_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBioseq > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_get_sequences_reply_.hpp.

References CBlast4_get_sequences_reply_Base::m_set_State.

◆ IsSet() [10/10]

bool CBlast4_parameters_Base::IsSet ( void  ) const
inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CBlast4_parameter > > Tdata'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 152 of file Blast4_parameters_.hpp.

References CBlast4_parameters_Base::m_set_State.

◆ IsSetAlgorithm_options() [1/2]

bool CBlast4_queue_search_request_Base::IsSetAlgorithm_options ( void  ) const
inline

Check if a value has been assigned to Algorithm_options data member.

Data member Algorithm_options is optional; its type is defined as 'typedef CBlast4_parameters TAlgorithm_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 660 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Algorithm_options.

Referenced by CBlast4_queue_search_request_Base::CanGetAlgorithm_options().

◆ IsSetAlgorithm_options() [2/2]

bool CBlast4_get_request_info_reply_Base::IsSetAlgorithm_options ( void  ) const
inline

Check if a value has been assigned to Algorithm_options data member.

Data member Algorithm_options is mandatory; its type is defined as 'typedef CBlast4_parameters TAlgorithm_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 689 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Algorithm_options.

◆ IsSetAlignments() [1/2]

bool CBlast4_get_search_results_reply_Base::IsSetAlignments ( void  ) const
inline

Check if a value has been assigned to Alignments data member.

Data member Alignments is optional; its type is defined as 'typedef CSeq_align_set TAlignments'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 392 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Alignments.

Referenced by CBlast4_get_search_results_reply_Base::CanGetAlignments().

◆ IsSetAlignments() [2/2]

bool CBlast4_alignments_for_query_Base::IsSetAlignments ( void  ) const
inline

All the alignments for this query Check if a value has been assigned to Alignments data member.

Data member Alignments is mandatory; its type is defined as 'typedef list< CRef< CBlast4_simple_alignment > > TAlignments'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 249 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::m_set_State.

◆ IsSetAll_alignments()

bool CBlast4_simple_results_Base::IsSetAll_alignments ( void  ) const
inline

Check if a value has been assigned to All_alignments data member.

Data member All_alignments is mandatory; its type is defined as 'typedef list< CRef< CBlast4_alignments_for_query > > TAll_alignments'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 158 of file Blast4_simple_results_.hpp.

References CBlast4_simple_results_Base::m_set_State.

◆ IsSetBit_score()

bool CBlast4_simple_alignment_Base::IsSetBit_score ( void  ) const
inline

Bit score Check if a value has been assigned to Bit_score data member.

Data member Bit_score is mandatory; its type is defined as 'typedef double TBit_score'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 506 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State.

Referenced by CBlast4_simple_alignment_Base::CanGetBit_score(), and CBlast4_simple_alignment_Base::SetBit_score().

◆ IsSetBody() [1/2]

bool CBlast4_reply_Base::IsSetBody ( void  ) const
inline

Check if a value has been assigned to Body data member.

Data member Body is mandatory; its type is defined as 'typedef CBlast4_reply_body TBody'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 261 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_Body.

◆ IsSetBody() [2/2]

bool CBlast4_request_Base::IsSetBody ( void  ) const
inline

Payload of the request Check if a value has been assigned to Body data member.

Data member Body is mandatory; its type is defined as 'typedef CBlast4_request_body TBody'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 292 of file Blast4_request_.hpp.

References CBlast4_request_Base::m_Body.

◆ IsSetCode()

bool CBlast4_error_Base::IsSetCode ( void  ) const
inline

This is an integer to allow for flexibility, but the values assigned should be of type Blast4-error-code Check if a value has been assigned to Code data member.

Data member Code is mandatory; its type is defined as 'typedef int TCode'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 240 of file Blast4_error_.hpp.

References CBlast4_error_Base::m_set_State.

Referenced by CBlast4_error_Base::CanGetCode(), and CBlast4_error_Base::SetCode().

◆ IsSetCreated_by()

bool CBlast4_get_request_info_reply_Base::IsSetCreated_by ( void  ) const
inline

Check if a value has been assigned to Created_by data member.

Data member Created_by is mandatory; its type is defined as 'typedef string TCreated_by'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 612 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_set_State.

Referenced by CBlast4_get_request_info_reply_Base::CanGetCreated_by(), and CBlast4_get_request_info_reply_Base::SetCreated_by().

◆ IsSetData()

bool CBlast4_seq_part_data_Base::IsSetData ( void  ) const
inline

Its sequence data (may be partial) Check if a value has been assigned to Data data member.

Data member Data is mandatory; its type is defined as 'typedef CSeq_data TData'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 233 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Data, and CRef< C, Locker >::NotEmpty().

◆ IsSetDatabase() [1/4]

bool CBlast4_database_info_Base::IsSetDatabase ( void  ) const
inline

Check if a value has been assigned to Database data member.

Data member Database is mandatory; its type is defined as 'typedef CBlast4_database TDatabase'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 446 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Database.

◆ IsSetDatabase() [2/4]

bool CBlast4_get_sequences_request_Base::IsSetDatabase ( void  ) const
inline

Name of the BLAST database from which to retrieve the sequence data Check if a value has been assigned to Database data member.

Data member Database is mandatory; its type is defined as 'typedef CBlast4_database TDatabase'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 288 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Database.

◆ IsSetDatabase() [3/4]

bool CBlast4_get_request_info_reply_Base::IsSetDatabase ( void  ) const
inline

Check if a value has been assigned to Database data member.

Data member Database is mandatory; its type is defined as 'typedef CBlast4_database TDatabase'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 488 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Database.

◆ IsSetDatabase() [4/4]

bool CBlast4_get_seq_parts_request_Base::IsSetDatabase ( void  ) const
inline

Name of the BLAST database from which to retrieve the sequence data Check if a value has been assigned to Database data member.

Data member Database is mandatory; its type is defined as 'typedef CBlast4_database TDatabase'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 204 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_Database.

◆ IsSetDescription()

bool CBlast4_database_info_Base::IsSetDescription ( void  ) const
inline

Check if a value has been assigned to Description data member.

Data member Description is mandatory; its type is defined as 'typedef string TDescription'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 476 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetDescription(), and CBlast4_database_info_Base::SetDescription().

◆ IsSetDocumentation()

bool CBlast4_task_info_Base::IsSetDocumentation ( void  ) const
inline

Description of the task Check if a value has been assigned to Documentation data member.

Data member Documentation is mandatory; its type is defined as 'typedef string TDocumentation'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 250 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::m_set_State.

Referenced by CBlast4_task_info_Base::CanGetDocumentation(), and CBlast4_task_info_Base::SetDocumentation().

◆ IsSetE_value()

bool CBlast4_simple_alignment_Base::IsSetE_value ( void  ) const
inline

E-Value Check if a value has been assigned to E_value data member.

Data member E_value is mandatory; its type is defined as 'typedef double TE_value'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 459 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State.

Referenced by CBlast4_simple_alignment_Base::CanGetE_value(), and CBlast4_simple_alignment_Base::SetE_value().

◆ IsSetEnd()

bool CBlast4_range_Base::IsSetEnd ( void  ) const
inline

Check if a value has been assigned to End data member.

Data member End is optional; its type is defined as 'typedef int TEnd'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 284 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State.

Referenced by CBlast4_range_Base::CanGetEnd(), and CBlast4_range_Base::SetEnd().

◆ IsSetErrors()

bool CBlast4_reply_Base::IsSetErrors ( void  ) const
inline

Check if a value has been assigned to Errors data member.

Data member Errors is optional; its type is defined as 'typedef list< CRef< CBlast4_error > > TErrors'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 236 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_set_State.

◆ IsSetExtended()

bool CBlast4_database_info_Base::IsSetExtended ( void  ) const
inline

Check if a value has been assigned to Extended data member.

Data member Extended is optional; its type is defined as 'typedef CBlast4_parameters TExtended'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 758 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Extended.

Referenced by CBlast4_database_info_Base::CanGetExtended().

◆ IsSetFormat_options() [1/2]

bool CBlast4_queue_search_request_Base::IsSetFormat_options ( void  ) const
inline

Check if a value has been assigned to Format_options data member.

Data member Format_options is optional; its type is defined as 'typedef CBlast4_parameters TFormat_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 702 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Format_options.

Referenced by CBlast4_queue_search_request_Base::CanGetFormat_options().

◆ IsSetFormat_options() [2/2]

bool CBlast4_get_request_info_reply_Base::IsSetFormat_options ( void  ) const
inline

Check if a value has been assigned to Format_options data member.

Data member Format_options is optional; its type is defined as 'typedef CBlast4_parameters TFormat_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 749 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Format_options.

Referenced by CBlast4_get_request_info_reply_Base::CanGetFormat_options().

◆ IsSetFrame()

bool CBlast4_mask_Base::IsSetFrame ( void  ) const
inline

Check if a value has been assigned to Frame data member.

Data member Frame is mandatory; its type is defined as 'typedef EBlast4_frame_type TFrame'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 236 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_set_State.

Referenced by CBlast4_mask_Base::CanGetFrame(), and CBlast4_mask_Base::SetFrame().

◆ IsSetFull_query_range()

bool CBlast4_simple_alignment_Base::IsSetFull_query_range ( void  ) const
inline

Full query range covered by this HSP Check if a value has been assigned to Full_query_range data member.

Data member Full_query_range is mandatory; its type is defined as 'typedef CBlast4_range TFull_query_range'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 647 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_query_range.

◆ IsSetFull_subject_range()

bool CBlast4_simple_alignment_Base::IsSetFull_subject_range ( void  ) const
inline

Full subject range covered by this HSP Check if a value has been assigned to Full_subject_range data member.

Data member Full_subject_range is mandatory; its type is defined as 'typedef CBlast4_range TFull_subject_range'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 677 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_subject_range.

◆ IsSetGapped()

bool CBlast4_ka_block_Base::IsSetGapped ( void  ) const
inline

Check if a value has been assigned to Gapped data member.

Data member Gapped is mandatory; its type is defined as 'typedef bool TGapped'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 415 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::CanGetGapped(), and CBlast4_ka_block_Base::SetGapped().

◆ IsSetH()

bool CBlast4_ka_block_Base::IsSetH ( void  ) const
inline

Check if a value has been assigned to H data member.

Data member H is mandatory; its type is defined as 'typedef double TH'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 368 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::CanGetH(), and CBlast4_ka_block_Base::SetH().

◆ IsSetId()

bool CBlast4_seq_part_data_Base::IsSetId ( void  ) const
inline

Sequence identifier Check if a value has been assigned to Id data member.

Data member Id is mandatory; its type is defined as 'typedef CSeq_id TId'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 203 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Id.

◆ IsSetIdent()

bool CBlast4_request_Base::IsSetIdent ( void  ) const
inline

Client identifier (email address, organization name, program/script name, or any other form of contacting the owner of this request) Check if a value has been assigned to Ident data member.

Data member Ident is optional; its type is defined as 'typedef string TIdent'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 245 of file Blast4_request_.hpp.

References CBlast4_request_Base::m_set_State.

Referenced by CBlast4_request_Base::CanGetIdent(), and CBlast4_request_Base::SetIdent().

◆ IsSetInfo() [1/2]

bool CBlast4_get_search_info_reply_Base::IsSetInfo ( void  ) const
inline

Check if a value has been assigned to Info data member.

Data member Info is optional; its type is defined as 'typedef CBlast4_parameters TInfo'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 250 of file Blast_get_searc_info_reply_.hpp.

References CBlast4_get_search_info_reply_Base::m_Info, and CRef< C, Locker >::NotEmpty().

Referenced by CBlast4_get_search_info_reply_Base::CanGetInfo().

◆ IsSetInfo() [2/2]

bool CBlast4_get_search_info_request_Base::IsSetInfo ( void  ) const
inline

Check if a value has been assigned to Info data member.

Data member Info is optional; its type is defined as 'typedef CBlast4_parameters TInfo'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 251 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::m_Info, and CRef< C, Locker >::NotEmpty().

Referenced by CBlast4_get_search_info_request_Base::CanGetInfo().

◆ IsSetK()

bool CBlast4_ka_block_Base::IsSetK ( void  ) const
inline

Check if a value has been assigned to K data member.

Data member K is mandatory; its type is defined as 'typedef double TK'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 321 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::CanGetK(), and CBlast4_ka_block_Base::SetK().

◆ IsSetKa_blocks()

bool CBlast4_get_search_results_reply_Base::IsSetKa_blocks ( void  ) const
inline

Check if a value has been assigned to Ka_blocks data member.

Data member Ka_blocks is optional; its type is defined as 'typedef list< CRef< CBlast4_ka_block > > TKa_blocks'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 459 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_set_State.

◆ IsSetLambda()

bool CBlast4_ka_block_Base::IsSetLambda ( void  ) const
inline

Check if a value has been assigned to Lambda data member.

Data member Lambda is mandatory; its type is defined as 'typedef double TLambda'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 274 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::CanGetLambda(), and CBlast4_ka_block_Base::SetLambda().

◆ IsSetLast_updated()

bool CBlast4_database_info_Base::IsSetLast_updated ( void  ) const
inline

Check if a value has been assigned to Last_updated data member.

Data member Last_updated is mandatory; its type is defined as 'typedef string TLast_updated'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 523 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetLast_updated(), and CBlast4_database_info_Base::SetLast_updated().

◆ IsSetLocations()

bool CBlast4_mask_Base::IsSetLocations ( void  ) const
inline

Check if a value has been assigned to Locations data member.

Data member Locations is mandatory; its type is defined as 'typedef list< CRef< CSeq_loc > > TLocations'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 211 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_set_State.

◆ IsSetMasks()

bool CBlast4_get_search_results_reply_Base::IsSetMasks ( void  ) const
inline

Masking locations for the query sequence(s).

Each element of this set corresponds to a single query's translation frame as appropriate. Check if a value has been assigned to Masks data member.

Data member Masks is optional; its type is defined as 'typedef list< CRef< CBlast4_mask > > TMasks'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 434 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_set_State.

◆ IsSetMessage()

bool CBlast4_error_Base::IsSetMessage ( void  ) const
inline

Check if a value has been assigned to Message data member.

Data member Message is optional; its type is defined as 'typedef string TMessage'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 287 of file Blast4_error_.hpp.

References CBlast4_error_Base::m_set_State.

Referenced by CBlast4_error_Base::CanGetMessage(), and CBlast4_error_Base::SetMessage().

◆ IsSetMessages()

bool CBlast4_archive_Base::IsSetMessages ( void  ) const
inline

Check if a value has been assigned to Messages data member.

Data member Messages is optional; its type is defined as 'typedef list< CRef< CBlast4_error > > TMessages'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 302 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_set_State.

◆ IsSetName() [1/5]

bool CBlast4_database_Base::IsSetName ( void  ) const
inline

Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 200 of file Blast4_database_.hpp.

References CBlast4_database_Base::m_set_State.

Referenced by CBlast4_database_Base::CanGetName(), and CBlast4_database_Base::SetName().

◆ IsSetName() [2/5]

bool CBlast4_matrix_id_Base::IsSetName ( void  ) const
inline

Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 247 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::m_set_State.

Referenced by CBlast4_matrix_id_Base::CanGetName(), and CBlast4_matrix_id_Base::SetName().

◆ IsSetName() [3/5]

bool CBlast4_parameter_Base::IsSetName ( void  ) const
inline

Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 203 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::m_set_State.

Referenced by CBlast4_parameter_Base::CanGetName(), and CBlast4_parameter_Base::SetName().

◆ IsSetName() [4/5]

bool CBlast4_parameter_info_Base::IsSetName ( void  ) const
inline

Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 200 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::m_set_State.

Referenced by CBlast4_parameter_info_Base::CanGetName(), and CBlast4_parameter_info_Base::SetName().

◆ IsSetName() [5/5]

bool CBlast4_task_info_Base::IsSetName ( void  ) const
inline

Name of this task Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 203 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::m_set_State.

Referenced by CBlast4_task_info_Base::CanGetName(), and CBlast4_task_info_Base::SetName().

◆ IsSetNum_alignments()

bool CBlast4_phi_alignments_Base::IsSetNum_alignments ( void  ) const
inline

Check if a value has been assigned to Num_alignments data member.

Data member Num_alignments is mandatory; its type is defined as 'typedef int TNum_alignments'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 196 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_set_State.

Referenced by CBlast4_phi_alignments_Base::CanGetNum_alignments(), and CBlast4_phi_alignments_Base::SetNum_alignments().

◆ IsSetNum_identities()

bool CBlast4_simple_alignment_Base::IsSetNum_identities ( void  ) const
inline

Number of identities Check if a value has been assigned to Num_identities data member.

Data member Num_identities is optional; its type is defined as 'typedef int TNum_identities'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 553 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State.

Referenced by CBlast4_simple_alignment_Base::CanGetNum_identities(), and CBlast4_simple_alignment_Base::SetNum_identities().

◆ IsSetNum_indels()

bool CBlast4_simple_alignment_Base::IsSetNum_indels ( void  ) const
inline

Number of insertions/deletions Check if a value has been assigned to Num_indels data member.

Data member Num_indels is optional; its type is defined as 'typedef int TNum_indels'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 600 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State.

Referenced by CBlast4_simple_alignment_Base::CanGetNum_indels(), and CBlast4_simple_alignment_Base::SetNum_indels().

◆ IsSetNum_sequences()

bool CBlast4_database_info_Base::IsSetNum_sequences ( void  ) const
inline

Check if a value has been assigned to Num_sequences data member.

Data member Num_sequences is mandatory; its type is defined as 'typedef Int8 TNum_sequences'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 617 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetNum_sequences(), and CBlast4_database_info_Base::SetNum_sequences().

◆ IsSetParams() [1/2]

bool CBlast4_finish_params_request_Base::IsSetParams ( void  ) const
inline

Check if a value has been assigned to Params data member.

Data member Params is optional; its type is defined as 'typedef CBlast4_parameters TParams'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 427 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_Params.

Referenced by CBlast4_finish_params_request_Base::CanGetParams().

◆ IsSetParams() [2/2]

bool CBlast4_get_databases_ex_request_Base::IsSetParams ( void  ) const
inline

Check if a value has been assigned to Params data member.

Data member Params is optional; its type is defined as 'typedef CBlast4_parameters TParams'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 158 of file Blast_get_databa_ex_reques_.hpp.

References CBlast4_get_databases_ex_request_Base::m_Params.

Referenced by CBlast4_get_databases_ex_request_Base::CanGetParams().

◆ IsSetParamset() [1/2]

bool CBlast4_queue_search_request_Base::IsSetParamset ( void  ) const
inline

This field contains a task description Check if a value has been assigned to Paramset data member.

Data member Paramset is optional; its type is defined as 'typedef string TParamset'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 613 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_set_State.

Referenced by CBlast4_queue_search_request_Base::CanGetParamset(), and CBlast4_queue_search_request_Base::SetParamset().

◆ IsSetParamset() [2/2]

bool CBlast4_finish_params_request_Base::IsSetParamset ( void  ) const
inline

Check if a value has been assigned to Paramset data member.

Data member Paramset is optional; its type is defined as 'typedef string TParamset'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 380 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_set_State.

Referenced by CBlast4_finish_params_request_Base::CanGetParamset(), and CBlast4_finish_params_request_Base::SetParamset().

◆ IsSetPhi_alignments()

bool CBlast4_get_search_results_reply_Base::IsSetPhi_alignments ( void  ) const
inline

Check if a value has been assigned to Phi_alignments data member.

Data member Phi_alignments is optional; its type is defined as 'typedef CBlast4_phi_alignments TPhi_alignments'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 413 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Phi_alignments.

Referenced by CBlast4_get_search_results_reply_Base::CanGetPhi_alignments().

◆ IsSetProgram() [1/4]

bool CBlast4_program_info_Base::IsSetProgram ( void  ) const
inline

Check if a value has been assigned to Program data member.

Data member Program is mandatory; its type is defined as 'typedef string TProgram'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 194 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::m_set_State.

Referenced by CBlast4_program_info_Base::CanGetProgram(), and CBlast4_program_info_Base::SetProgram().

◆ IsSetProgram() [2/4]

bool CBlast4_queue_search_request_Base::IsSetProgram ( void  ) const
inline

Check if a value has been assigned to Program data member.

Data member Program is mandatory; its type is defined as 'typedef string TProgram'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 459 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_set_State.

Referenced by CBlast4_queue_search_request_Base::CanGetProgram(), and CBlast4_queue_search_request_Base::SetProgram().

◆ IsSetProgram() [3/4]

bool CBlast4_finish_params_request_Base::IsSetProgram ( void  ) const
inline

Check if a value has been assigned to Program data member.

Data member Program is mandatory; its type is defined as 'typedef string TProgram'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 286 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_set_State.

Referenced by CBlast4_finish_params_request_Base::CanGetProgram(), and CBlast4_finish_params_request_Base::SetProgram().

◆ IsSetProgram() [4/4]

bool CBlast4_get_request_info_reply_Base::IsSetProgram ( void  ) const
inline

Check if a value has been assigned to Program data member.

Data member Program is mandatory; its type is defined as 'typedef string TProgram'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 518 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_set_State.

Referenced by CBlast4_get_request_info_reply_Base::CanGetProgram(), and CBlast4_get_request_info_reply_Base::SetProgram().

◆ IsSetProgram_options() [1/2]

bool CBlast4_queue_search_request_Base::IsSetProgram_options ( void  ) const
inline

Check if a value has been assigned to Program_options data member.

Data member Program_options is optional; its type is defined as 'typedef CBlast4_parameters TProgram_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 681 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Program_options.

Referenced by CBlast4_queue_search_request_Base::CanGetProgram_options().

◆ IsSetProgram_options() [2/2]

bool CBlast4_get_request_info_reply_Base::IsSetProgram_options ( void  ) const
inline

Check if a value has been assigned to Program_options data member.

Data member Program_options is mandatory; its type is defined as 'typedef CBlast4_parameters TProgram_options'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 719 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Program_options.

◆ IsSetPssm()

bool CBlast4_get_search_results_reply_Base::IsSetPssm ( void  ) const
inline

Check if a value has been assigned to Pssm data member.

Data member Pssm is optional; its type is defined as 'typedef CPssmWithParameters TPssm'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 509 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Pssm.

Referenced by CBlast4_get_search_results_reply_Base::CanGetPssm().

◆ IsSetQueries() [1/3]

bool CBlast4_get_queries_reply_Base::IsSetQueries ( void  ) const
inline

Check if a value has been assigned to Queries data member.

Data member Queries is mandatory; its type is defined as 'typedef CBlast4_queries TQueries'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 158 of file Blast4_get_queries_reply_.hpp.

References CBlast4_get_queries_reply_Base::m_Queries.

◆ IsSetQueries() [2/3]

bool CBlast4_queue_search_request_Base::IsSetQueries ( void  ) const
inline

Check if a value has been assigned to Queries data member.

Data member Queries is mandatory; its type is defined as 'typedef CBlast4_queries TQueries'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 553 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Queries.

◆ IsSetQueries() [3/3]

bool CBlast4_get_request_info_reply_Base::IsSetQueries ( void  ) const
inline

Check if a value has been assigned to Queries data member.

Data member Queries is mandatory; its type is defined as 'typedef CBlast4_queries TQueries'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 659 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Queries.

◆ IsSetQuery_id()

bool CBlast4_alignments_for_query_Base::IsSetQuery_id ( void  ) const
inline

Query sequence identifier (present if query is not a local id in the SeqAlign) Check if a value has been assigned to Query_id data member.

Data member Query_id is mandatory; its type is defined as 'typedef string TQuery_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 202 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::m_set_State.

Referenced by CBlast4_alignments_for_query_Base::CanGetQuery_id(), and CBlast4_alignments_for_query_Base::SetQuery_id().

◆ IsSetRequest()

bool CBlast4_archive_Base::IsSetRequest ( void  ) const
inline

Query and options Check if a value has been assigned to Request data member.

Data member Request is mandatory; its type is defined as 'typedef CBlast4_request TRequest'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 242 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Request.

◆ IsSetRequest_id() [1/7]

bool CBlast4_get_search_results_request_Base::IsSetRequest_id ( void  ) const
inline

The request ID of the BLAST search Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 201 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::m_set_State.

Referenced by CBlast4_get_search_results_request_Base::CanGetRequest_id(), and CBlast4_get_search_results_request_Base::SetRequest_id().

◆ IsSetRequest_id() [2/7]

bool CBlast4_get_search_status_request_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 160 of file Blas_get_searc_statu_reque_.hpp.

References CBlast4_get_search_status_request_Base::m_set_State.

Referenced by CBlast4_get_search_status_request_Base::CanGetRequest_id(), and CBlast4_get_search_status_request_Base::SetRequest_id().

◆ IsSetRequest_id() [3/7]

bool CBlast4_get_search_strategy_request_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 160 of file Blas_get_searc_strat_reque_.hpp.

References CBlast4_get_search_strategy_request_Base::m_set_State.

Referenced by CBlast4_get_search_strategy_request_Base::CanGetRequest_id(), and CBlast4_get_search_strategy_request_Base::SetRequest_id().

◆ IsSetRequest_id() [4/7]

bool CBlast4_queue_search_reply_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is optional; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 159 of file Blast4_queue_search_reply_.hpp.

References CBlast4_queue_search_reply_Base::m_set_State.

Referenced by CBlast4_queue_search_reply_Base::CanGetRequest_id(), and CBlast4_queue_search_reply_Base::SetRequest_id().

◆ IsSetRequest_id() [5/7]

bool CBlast4_get_request_info_request_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 160 of file Blast_get_reque_info_reque_.hpp.

References CBlast4_get_request_info_request_Base::m_set_State.

Referenced by CBlast4_get_request_info_request_Base::CanGetRequest_id(), and CBlast4_get_request_info_request_Base::SetRequest_id().

◆ IsSetRequest_id() [6/7]

bool CBlast4_get_search_info_reply_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 203 of file Blast_get_searc_info_reply_.hpp.

References CBlast4_get_search_info_reply_Base::m_set_State.

Referenced by CBlast4_get_search_info_reply_Base::CanGetRequest_id(), and CBlast4_get_search_info_reply_Base::SetRequest_id().

◆ IsSetRequest_id() [7/7]

bool CBlast4_get_search_info_request_Base::IsSetRequest_id ( void  ) const
inline

Check if a value has been assigned to Request_id data member.

Data member Request_id is mandatory; its type is defined as 'typedef string TRequest_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 204 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::m_set_State.

Referenced by CBlast4_get_search_info_request_Base::CanGetRequest_id(), and CBlast4_get_search_info_request_Base::SetRequest_id().

◆ IsSetResidue_type()

bool CBlast4_matrix_id_Base::IsSetResidue_type ( void  ) const
inline

Check if a value has been assigned to Residue_type data member.

Data member Residue_type is mandatory; its type is defined as 'typedef EBlast4_residue_type TResidue_type'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 200 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::m_set_State.

Referenced by CBlast4_matrix_id_Base::CanGetResidue_type(), and CBlast4_matrix_id_Base::SetResidue_type().

◆ IsSetResult_types()

bool CBlast4_get_search_results_request_Base::IsSetResult_types ( void  ) const
inline

Logical OR of Blast4-result-types, assumes default if absent Check if a value has been assigned to Result_types data member.

Data member Result_types is optional; its type is defined as 'typedef int TResult_types'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 248 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::m_set_State.

Referenced by CBlast4_get_search_results_request_Base::CanGetResult_types(), and CBlast4_get_search_results_request_Base::SetResult_types().

◆ IsSetResults()

bool CBlast4_archive_Base::IsSetResults ( void  ) const
inline

Results of search Check if a value has been assigned to Results data member.

Data member Results is mandatory; its type is defined as 'typedef CBlast4_get_search_results_reply TResults'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 272 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Results.

◆ IsSetSearch_stats()

bool CBlast4_get_search_results_reply_Base::IsSetSearch_stats ( void  ) const
inline

Check if a value has been assigned to Search_stats data member.

Data member Search_stats is optional; its type is defined as 'typedef list< string > TSearch_stats'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 484 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_set_State.

◆ IsSetSeq_ids()

bool CBlast4_get_sequences_request_Base::IsSetSeq_ids ( void  ) const
inline

Sequence identifiers for the sequence to get Check if a value has been assigned to Seq_ids data member.

Data member Seq_ids is mandatory; its type is defined as 'typedef list< CRef< CSeq_id > > TSeq_ids'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 318 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_set_State.

◆ IsSetSeq_locations()

bool CBlast4_get_seq_parts_request_Base::IsSetSeq_locations ( void  ) const
inline

Allows the specification of ranges of sequence data needed.

If the sequence(s) interval's end is 0, no data will be fetched. If end is past the length of the sequence, it will be adjusted to the end of the sequence (this allows fetching of the first chunk in cases where the length is not yet known). Check if a value has been assigned to Seq_locations data member.

Data member Seq_locations is mandatory; its type is defined as 'typedef list< CRef< CSeq_interval > > TSeq_locations'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 234 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_set_State.

◆ IsSetSeq_locs()

bool CBlast4_phi_alignments_Base::IsSetSeq_locs ( void  ) const
inline

Check if a value has been assigned to Seq_locs data member.

Data member Seq_locs is mandatory; its type is defined as 'typedef list< CRef< CSeq_loc > > TSeq_locs'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 243 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_set_State.

◆ IsSetSeqtech()

bool CBlast4_database_info_Base::IsSetSeqtech ( void  ) const
inline

Check if a value has been assigned to Seqtech data member.

Data member Seqtech is mandatory; its type is defined as 'typedef int TSeqtech'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 664 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetSeqtech(), and CBlast4_database_info_Base::SetSeqtech().

◆ IsSetService() [1/3]

bool CBlast4_queue_search_request_Base::IsSetService ( void  ) const
inline

Check if a value has been assigned to Service data member.

Data member Service is mandatory; its type is defined as 'typedef string TService'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 506 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_set_State.

Referenced by CBlast4_queue_search_request_Base::CanGetService(), and CBlast4_queue_search_request_Base::SetService().

◆ IsSetService() [2/3]

bool CBlast4_finish_params_request_Base::IsSetService ( void  ) const
inline

Check if a value has been assigned to Service data member.

Data member Service is mandatory; its type is defined as 'typedef string TService'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 333 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_set_State.

Referenced by CBlast4_finish_params_request_Base::CanGetService(), and CBlast4_finish_params_request_Base::SetService().

◆ IsSetService() [3/3]

bool CBlast4_get_request_info_reply_Base::IsSetService ( void  ) const
inline

Check if a value has been assigned to Service data member.

Data member Service is mandatory; its type is defined as 'typedef string TService'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 565 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_set_State.

Referenced by CBlast4_get_request_info_reply_Base::CanGetService(), and CBlast4_get_request_info_reply_Base::SetService().

◆ IsSetServices()

bool CBlast4_program_info_Base::IsSetServices ( void  ) const
inline

Check if a value has been assigned to Services data member.

Data member Services is mandatory; its type is defined as 'typedef list< string > TServices'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 241 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::m_set_State.

◆ IsSetSimple_results()

bool CBlast4_get_search_results_reply_Base::IsSetSimple_results ( void  ) const
inline

Check if a value has been assigned to Simple_results data member.

Data member Simple_results is optional; its type is defined as 'typedef CBlast4_simple_results TSimple_results'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 530 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Simple_results.

Referenced by CBlast4_get_search_results_reply_Base::CanGetSimple_results().

◆ IsSetSkip_seq_data()

bool CBlast4_get_sequences_request_Base::IsSetSkip_seq_data ( void  ) const
inline

Determines whether the returned Bioseqs should contain the sequence data or not Check if a value has been assigned to Skip_seq_data data member.

Data member Skip_seq_data is optional with default false; its type is defined as 'typedef bool TSkip_seq_data'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 343 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_set_State.

Referenced by CBlast4_get_sequences_request_Base::SetSkip_seq_data().

◆ IsSetStart()

bool CBlast4_range_Base::IsSetStart ( void  ) const
inline

Check if a value has been assigned to Start data member.

Data member Start is optional; its type is defined as 'typedef int TStart'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 237 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State.

Referenced by CBlast4_range_Base::CanGetStart(), and CBlast4_range_Base::SetStart().

◆ IsSetStatus()

bool CBlast4_get_search_status_reply_Base::IsSetStatus ( void  ) const
inline

Check if a value has been assigned to Status data member.

Data member Status is mandatory; its type is defined as 'typedef string TStatus'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 160 of file Blas_get_searc_statu_reply_.hpp.

References CBlast4_get_search_status_reply_Base::m_set_State.

Referenced by CBlast4_get_search_status_reply_Base::CanGetStatus(), and CBlast4_get_search_status_reply_Base::SetStatus().

◆ IsSetStrand()

bool CBlast4_range_Base::IsSetStrand ( void  ) const
inline

The frame of the range (absent for proteins; -1/1 for nucleotides; -1,-2,-3,1,2,3 for translated sequences) Check if a value has been assigned to Strand data member.

Data member Strand is optional; its type is defined as 'typedef int TStrand'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 331 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State.

Referenced by CBlast4_range_Base::CanGetStrand(), and CBlast4_range_Base::SetStrand().

◆ IsSetSubject()

bool CBlast4_queue_search_request_Base::IsSetSubject ( void  ) const
inline

Check if a value has been assigned to Subject data member.

Data member Subject is mandatory; its type is defined as 'typedef CBlast4_subject TSubject'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 583 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Subject.

◆ IsSetSubject_id()

bool CBlast4_simple_alignment_Base::IsSetSubject_id ( void  ) const
inline

Subject sequence identifier (normally a GI from the SeqAlign) Check if a value has been assigned to Subject_id data member.

Data member Subject_id is mandatory; its type is defined as 'typedef string TSubject_id'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 412 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State.

Referenced by CBlast4_simple_alignment_Base::CanGetSubject_id(), and CBlast4_simple_alignment_Base::SetSubject_id().

◆ IsSetSubjects()

bool CBlast4_get_request_info_reply_Base::IsSetSubjects ( void  ) const
inline

Check if a value has been assigned to Subjects data member.

Data member Subjects is optional; its type is defined as 'typedef CBlast4_subject TSubjects'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 770 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Subjects.

Referenced by CBlast4_get_request_info_reply_Base::CanGetSubjects().

◆ IsSetTarget_only()

bool CBlast4_get_sequences_request_Base::IsSetTarget_only ( void  ) const
inline

Determines whether or not the defline of the returned Bioseqs should contain only the requested seq id.

This optional field only applies to non-redundant BLAST database Check if a value has been assigned to Target_only data member.

Data member Target_only is optional; its type is defined as 'typedef bool TTarget_only'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 393 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_set_State.

Referenced by CBlast4_get_sequences_request_Base::CanGetTarget_only(), and CBlast4_get_sequences_request_Base::SetTarget_only().

◆ IsSetTaxid()

bool CBlast4_database_info_Base::IsSetTaxid ( void  ) const
inline

Check if a value has been assigned to Taxid data member.

Data member Taxid is mandatory; its type is defined as 'typedef int TTaxid'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 711 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetTaxid(), and CBlast4_database_info_Base::SetTaxid().

◆ IsSetTotal_length()

bool CBlast4_database_info_Base::IsSetTotal_length ( void  ) const
inline

Check if a value has been assigned to Total_length data member.

Data member Total_length is mandatory; its type is defined as 'typedef Int8 TTotal_length'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 570 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::CanGetTotal_length(), and CBlast4_database_info_Base::SetTotal_length().

◆ IsSetType() [1/2]

bool CBlast4_database_Base::IsSetType ( void  ) const
inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef EBlast4_residue_type TType'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 247 of file Blast4_database_.hpp.

References CBlast4_database_Base::m_set_State.

Referenced by CBlast4_database_Base::CanGetType(), and CBlast4_database_Base::SetType().

◆ IsSetType() [2/2]

bool CBlast4_parameter_info_Base::IsSetType ( void  ) const
inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef string TType'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 247 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::m_set_State.

Referenced by CBlast4_parameter_info_Base::CanGetType(), and CBlast4_parameter_info_Base::SetType().

◆ IsSetValue()

bool CBlast4_parameter_Base::IsSetValue ( void  ) const
inline

Check if a value has been assigned to Value data member.

Data member Value is mandatory; its type is defined as 'typedef CBlast4_value TValue'

Returns
  • true, if a value has been assigned.
  • false, otherwise.

Definition at line 250 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::m_Value.

◆ IsStrand_type()

bool CBlast4_value_Base::IsStrand_type ( void  ) const
inline

Check if variant Strand_type is selected.

Strand_type type is defined as 'typedef EBlast4_strand_type TStrand_type'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1080 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Strand_type, and CBlast4_value_Base::m_choice.

◆ IsStrand_type_list()

bool CBlast4_value_Base::IsStrand_type_list ( void  ) const
inline

Check if variant Strand_type_list is selected.

Strand_type_list type is defined as 'typedef list< EBlast4_strand_type > TStrand_type_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1327 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Strand_type_list, and CBlast4_value_Base::m_choice.

◆ IsString()

bool CBlast4_value_Base::IsString ( void  ) const
inline

Check if variant String is selected.

String type is defined as 'typedef string TString'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1107 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_String, and CBlast4_value_Base::m_choice.

◆ IsString_list()

bool CBlast4_value_Base::IsString_list ( void  ) const
inline

Check if variant String_list is selected.

String_list type is defined as 'typedef list< string > TString_list'.

Returns
  • true, if the variant is selected.
  • false, otherwise.

Definition at line 1347 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_String_list, and CBlast4_value_Base::m_choice.

◆ operator const Tdata &() [1/10]

CBlast4_get_windowmasked_taxids_reply_Base::operator const CBlast4_get_windowmasked_taxids_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 173 of file Blas_get_windo_taxid_reply_.hpp.

◆ operator const Tdata &() [2/10]

CBlast4_get_databases_ex_reply_Base::operator const CBlast4_get_databases_ex_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_databa_ex_reply_.hpp.

◆ operator const Tdata &() [3/10]

CBlast4_get_databases_reply_Base::operator const CBlast4_get_databases_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_databases_reply_.hpp.

◆ operator const Tdata &() [4/10]

CBlast4_get_matrices_reply_Base::operator const CBlast4_get_matrices_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_matrices_reply_.hpp.

◆ operator const Tdata &() [5/10]

CBlast4_get_parameters_reply_Base::operator const CBlast4_get_parameters_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_parameter_reply_.hpp.

◆ operator const Tdata &() [6/10]

CBlast4_get_paramsets_reply_Base::operator const CBlast4_get_paramsets_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 180 of file Blast4_get_paramsets_reply_.hpp.

◆ operator const Tdata &() [7/10]

CBlast4_get_programs_reply_Base::operator const CBlast4_get_programs_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_programs_reply_.hpp.

◆ operator const Tdata &() [8/10]

CBlast4_get_seq_parts_reply_Base::operator const CBlast4_get_seq_parts_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_seq_parts_reply_.hpp.

◆ operator const Tdata &() [9/10]

CBlast4_get_sequences_reply_Base::operator const CBlast4_get_sequences_reply_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_get_sequences_reply_.hpp.

◆ operator const Tdata &() [10/10]

CBlast4_parameters_Base::operator const CBlast4_parameters_Base::Tdata & ( void  ) const
inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Blast4_parameters_.hpp.

◆ operator Tdata &() [1/10]

CBlast4_get_windowmasked_taxids_reply_Base::operator CBlast4_get_windowmasked_taxids_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 179 of file Blas_get_windo_taxid_reply_.hpp.

◆ operator Tdata &() [2/10]

CBlast4_get_databases_ex_reply_Base::operator CBlast4_get_databases_ex_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_databa_ex_reply_.hpp.

◆ operator Tdata &() [3/10]

CBlast4_get_databases_reply_Base::operator CBlast4_get_databases_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_databases_reply_.hpp.

◆ operator Tdata &() [4/10]

CBlast4_get_matrices_reply_Base::operator CBlast4_get_matrices_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_matrices_reply_.hpp.

◆ operator Tdata &() [5/10]

CBlast4_get_parameters_reply_Base::operator CBlast4_get_parameters_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_parameter_reply_.hpp.

◆ operator Tdata &() [6/10]

CBlast4_get_paramsets_reply_Base::operator CBlast4_get_paramsets_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 186 of file Blast4_get_paramsets_reply_.hpp.

◆ operator Tdata &() [7/10]

CBlast4_get_programs_reply_Base::operator CBlast4_get_programs_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_programs_reply_.hpp.

◆ operator Tdata &() [8/10]

CBlast4_get_seq_parts_reply_Base::operator CBlast4_get_seq_parts_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_seq_parts_reply_.hpp.

◆ operator Tdata &() [9/10]

CBlast4_get_sequences_reply_Base::operator CBlast4_get_sequences_reply_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_get_sequences_reply_.hpp.

◆ operator Tdata &() [10/10]

CBlast4_parameters_Base::operator CBlast4_parameters_Base::Tdata & ( void  )
inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Blast4_parameters_.hpp.

◆ operator=() [1/99]

CBlast4_alignments_for_query& CBlast4_alignments_for_query::operator= ( const CBlast4_alignments_for_query value)
private

◆ operator=() [2/99]

CBlast4_alignments_for_query_Base& CBlast4_alignments_for_query_Base::operator= ( const CBlast4_alignments_for_query_Base )
private

◆ operator=() [3/99]

CBlast4_archive& CBlast4_archive::operator= ( const CBlast4_archive value)
private

◆ operator=() [4/99]

CBlast4_archive_Base& CBlast4_archive_Base::operator= ( const CBlast4_archive_Base )
private

◆ operator=() [5/99]

CBlast4_cutoff& CBlast4_cutoff::operator= ( const CBlast4_cutoff value)
private

◆ operator=() [6/99]

CBlast4_cutoff_Base& CBlast4_cutoff_Base::operator= ( const CBlast4_cutoff_Base )
private

◆ operator=() [7/99]

CBlast4_database_Base& CBlast4_database_Base::operator= ( const CBlast4_database_Base )
private

◆ operator=() [8/99]

CBlast4_database_info& CBlast4_database_info::operator= ( const CBlast4_database_info value)
private

◆ operator=() [9/99]

CBlast4_database_info_Base& CBlast4_database_info_Base::operator= ( const CBlast4_database_info_Base )
private

◆ operator=() [10/99]

CBlast4_error& CBlast4_error::operator= ( const CBlast4_error value)
private

◆ operator=() [11/99]

CBlast4_error_Base& CBlast4_error_Base::operator= ( const CBlast4_error_Base )
private

◆ operator=() [12/99]

CBlast4_finish_params_request& CBlast4_finish_params_request::operator= ( const CBlast4_finish_params_request value)
private

◆ operator=() [13/99]

CBlast4_finish_params_request_Base& CBlast4_finish_params_request_Base::operator= ( const CBlast4_finish_params_request_Base )
private

◆ operator=() [14/99]

CBlast4_get_databases_ex_reply& CBlast4_get_databases_ex_reply::operator= ( const CBlast4_get_databases_ex_reply value)
private

◆ operator=() [15/99]

CBlast4_get_databases_ex_reply_Base& CBlast4_get_databases_ex_reply_Base::operator= ( const CBlast4_get_databases_ex_reply_Base )
private

◆ operator=() [16/99]

CBlast4_get_databases_ex_request& CBlast4_get_databases_ex_request::operator= ( const CBlast4_get_databases_ex_request value)
private

◆ operator=() [17/99]

CBlast4_get_databases_ex_request_Base& CBlast4_get_databases_ex_request_Base::operator= ( const CBlast4_get_databases_ex_request_Base )
private

◆ operator=() [18/99]

CBlast4_get_databases_reply& CBlast4_get_databases_reply::operator= ( const CBlast4_get_databases_reply value)
private

◆ operator=() [19/99]

CBlast4_get_databases_reply_Base& CBlast4_get_databases_reply_Base::operator= ( const CBlast4_get_databases_reply_Base )
private

◆ operator=() [20/99]

CBlast4_get_matrices_reply& CBlast4_get_matrices_reply::operator= ( const CBlast4_get_matrices_reply value)
private

◆ operator=() [21/99]

CBlast4_get_matrices_reply_Base& CBlast4_get_matrices_reply_Base::operator= ( const CBlast4_get_matrices_reply_Base )
private

◆ operator=() [22/99]

CBlast4_get_parameters_reply& CBlast4_get_parameters_reply::operator= ( const CBlast4_get_parameters_reply value)
private

◆ operator=() [23/99]

CBlast4_get_parameters_reply_Base& CBlast4_get_parameters_reply_Base::operator= ( const CBlast4_get_parameters_reply_Base )
private

◆ operator=() [24/99]

CBlast4_get_paramsets_reply& CBlast4_get_paramsets_reply::operator= ( const CBlast4_get_paramsets_reply value)
private

◆ operator=() [25/99]

CBlast4_get_paramsets_reply_Base& CBlast4_get_paramsets_reply_Base::operator= ( const CBlast4_get_paramsets_reply_Base )
private

◆ operator=() [26/99]

CBlast4_get_programs_reply& CBlast4_get_programs_reply::operator= ( const CBlast4_get_programs_reply value)
private

◆ operator=() [27/99]

CBlast4_get_programs_reply_Base& CBlast4_get_programs_reply_Base::operator= ( const CBlast4_get_programs_reply_Base )
private

◆ operator=() [28/99]

CBlast4_get_queries_reply& CBlast4_get_queries_reply::operator= ( const CBlast4_get_queries_reply value)
private

◆ operator=() [29/99]

CBlast4_get_queries_reply_Base& CBlast4_get_queries_reply_Base::operator= ( const CBlast4_get_queries_reply_Base )
private

◆ operator=() [30/99]

CBlast4_get_request_info_reply& CBlast4_get_request_info_reply::operator= ( const CBlast4_get_request_info_reply value)
private

◆ operator=() [31/99]

CBlast4_get_request_info_reply_Base& CBlast4_get_request_info_reply_Base::operator= ( const CBlast4_get_request_info_reply_Base )
private

◆ operator=() [32/99]

CBlast4_get_request_info_request& CBlast4_get_request_info_request::operator= ( const CBlast4_get_request_info_request value)
private

◆ operator=() [33/99]

CBlast4_get_request_info_request_Base& CBlast4_get_request_info_request_Base::operator= ( const CBlast4_get_request_info_request_Base )
private

◆ operator=() [34/99]

CBlast4_get_search_info_reply& CBlast4_get_search_info_reply::operator= ( const CBlast4_get_search_info_reply value)
private

◆ operator=() [35/99]

CBlast4_get_search_info_reply_Base& CBlast4_get_search_info_reply_Base::operator= ( const CBlast4_get_search_info_reply_Base )
private

◆ operator=() [36/99]

CBlast4_get_search_info_request& CBlast4_get_search_info_request::operator= ( const CBlast4_get_search_info_request value)
private

◆ operator=() [37/99]

CBlast4_get_search_info_request_Base& CBlast4_get_search_info_request_Base::operator= ( const CBlast4_get_search_info_request_Base )
private

◆ operator=() [38/99]

CBlast4_get_search_results_reply& CBlast4_get_search_results_reply::operator= ( const CBlast4_get_search_results_reply value)
private

◆ operator=() [39/99]

CBlast4_get_search_results_reply_Base& CBlast4_get_search_results_reply_Base::operator= ( const CBlast4_get_search_results_reply_Base )
private

◆ operator=() [40/99]

CBlast4_get_search_results_request& CBlast4_get_search_results_request::operator= ( const CBlast4_get_search_results_request value)
private

◆ operator=() [41/99]

CBlast4_get_search_results_request_Base& CBlast4_get_search_results_request_Base::operator= ( const CBlast4_get_search_results_request_Base )
private

◆ operator=() [42/99]

CBlast4_get_search_status_reply& CBlast4_get_search_status_reply::operator= ( const CBlast4_get_search_status_reply value)
private

◆ operator=() [43/99]

CBlast4_get_search_status_reply_Base& CBlast4_get_search_status_reply_Base::operator= ( const CBlast4_get_search_status_reply_Base )
private

◆ operator=() [44/99]

CBlast4_get_search_status_request& CBlast4_get_search_status_request::operator= ( const CBlast4_get_search_status_request value)
private

◆ operator=() [45/99]

CBlast4_get_search_status_request_Base& CBlast4_get_search_status_request_Base::operator= ( const CBlast4_get_search_status_request_Base )
private

◆ operator=() [46/99]

CBlast4_get_search_strategy_request& CBlast4_get_search_strategy_request::operator= ( const CBlast4_get_search_strategy_request value)
private

◆ operator=() [47/99]

CBlast4_get_search_strategy_request_Base& CBlast4_get_search_strategy_request_Base::operator= ( const CBlast4_get_search_strategy_request_Base )
private

◆ operator=() [48/99]

CBlast4_get_seq_parts_reply& CBlast4_get_seq_parts_reply::operator= ( const CBlast4_get_seq_parts_reply value)
private

◆ operator=() [49/99]

CBlast4_get_seq_parts_reply_Base& CBlast4_get_seq_parts_reply_Base::operator= ( const CBlast4_get_seq_parts_reply_Base )
private

◆ operator=() [50/99]

CBlast4_get_seq_parts_request& CBlast4_get_seq_parts_request::operator= ( const CBlast4_get_seq_parts_request value)
private

◆ operator=() [51/99]

CBlast4_get_seq_parts_request_Base& CBlast4_get_seq_parts_request_Base::operator= ( const CBlast4_get_seq_parts_request_Base )
private

◆ operator=() [52/99]

CBlast4_get_sequences_reply& CBlast4_get_sequences_reply::operator= ( const CBlast4_get_sequences_reply value)
private

◆ operator=() [53/99]

CBlast4_get_sequences_reply_Base& CBlast4_get_sequences_reply_Base::operator= ( const CBlast4_get_sequences_reply_Base )
private

◆ operator=() [54/99]

CBlast4_get_sequences_request& CBlast4_get_sequences_request::operator= ( const CBlast4_get_sequences_request value)
private

◆ operator=() [55/99]

CBlast4_get_sequences_request_Base& CBlast4_get_sequences_request_Base::operator= ( const CBlast4_get_sequences_request_Base )
private

◆ operator=() [56/99]

CBlast4_get_windowmasked_taxids_reply& CBlast4_get_windowmasked_taxids_reply::operator= ( const CBlast4_get_windowmasked_taxids_reply value)
private

◆ operator=() [57/99]

CBlast4_get_windowmasked_taxids_reply_Base& CBlast4_get_windowmasked_taxids_reply_Base::operator= ( const CBlast4_get_windowmasked_taxids_reply_Base )
private

◆ operator=() [58/99]

CBlast4_ka_block& CBlast4_ka_block::operator= ( const CBlast4_ka_block value)
private

◆ operator=() [59/99]

CBlast4_ka_block_Base& CBlast4_ka_block_Base::operator= ( const CBlast4_ka_block_Base )
private

◆ operator=() [60/99]

CBlast4_mask& CBlast4_mask::operator= ( const CBlast4_mask value)
private

◆ operator=() [61/99]

CBlast4_mask_Base& CBlast4_mask_Base::operator= ( const CBlast4_mask_Base )
private

◆ operator=() [62/99]

CBlast4_matrix_id& CBlast4_matrix_id::operator= ( const CBlast4_matrix_id value)
private

◆ operator=() [63/99]

CBlast4_matrix_id_Base& CBlast4_matrix_id_Base::operator= ( const CBlast4_matrix_id_Base )
private

◆ operator=() [64/99]

CBlast4_parameter& CBlast4_parameter::operator= ( const CBlast4_parameter value)
private

◆ operator=() [65/99]

CBlast4_parameter_Base& CBlast4_parameter_Base::operator= ( const CBlast4_parameter_Base )
private

◆ operator=() [66/99]

CBlast4_parameter_info& CBlast4_parameter_info::operator= ( const CBlast4_parameter_info value)
private

◆ operator=() [67/99]

CBlast4_parameter_info_Base& CBlast4_parameter_info_Base::operator= ( const CBlast4_parameter_info_Base )
private

◆ operator=() [68/99]

CBlast4_parameters_Base& CBlast4_parameters_Base::operator= ( const CBlast4_parameters_Base )
private

◆ operator=() [69/99]

CBlast4_phi_alignments& CBlast4_phi_alignments::operator= ( const CBlast4_phi_alignments value)
private

◆ operator=() [70/99]

CBlast4_phi_alignments_Base& CBlast4_phi_alignments_Base::operator= ( const CBlast4_phi_alignments_Base )
private

◆ operator=() [71/99]

CBlast4_program_info& CBlast4_program_info::operator= ( const CBlast4_program_info value)
private

◆ operator=() [72/99]

CBlast4_program_info_Base& CBlast4_program_info_Base::operator= ( const CBlast4_program_info_Base )
private

◆ operator=() [73/99]

CBlast4_queries_Base& CBlast4_queries_Base::operator= ( const CBlast4_queries_Base )
private

◆ operator=() [74/99]

CBlast4_queue_search_reply& CBlast4_queue_search_reply::operator= ( const CBlast4_queue_search_reply value)
private

◆ operator=() [75/99]

CBlast4_queue_search_reply_Base& CBlast4_queue_search_reply_Base::operator= ( const CBlast4_queue_search_reply_Base )
private

◆ operator=() [76/99]

CBlast4_queue_search_request& CBlast4_queue_search_request::operator= ( const CBlast4_queue_search_request value)
private

◆ operator=() [77/99]

CBlast4_queue_search_request_Base& CBlast4_queue_search_request_Base::operator= ( const CBlast4_queue_search_request_Base )
private

◆ operator=() [78/99]

CBlast4_range_Base& CBlast4_range_Base::operator= ( const CBlast4_range_Base )
private

◆ operator=() [79/99]

CBlast4_reply& CBlast4_reply::operator= ( const CBlast4_reply value)
private

◆ operator=() [80/99]

CBlast4_reply_Base& CBlast4_reply_Base::operator= ( const CBlast4_reply_Base )
private

◆ operator=() [81/99]

CBlast4_reply_body& CBlast4_reply_body::operator= ( const CBlast4_reply_body value)
private

◆ operator=() [82/99]

CBlast4_reply_body_Base& CBlast4_reply_body_Base::operator= ( const CBlast4_reply_body_Base )
private

◆ operator=() [83/99]

CBlast4_request& CBlast4_request::operator= ( const CBlast4_request value)
private

◆ operator=() [84/99]

CBlast4_request_Base& CBlast4_request_Base::operator= ( const CBlast4_request_Base )
private

◆ operator=() [85/99]

CBlast4_request_body& CBlast4_request_body::operator= ( const CBlast4_request_body value)
private

◆ operator=() [86/99]

CBlast4_request_body_Base& CBlast4_request_body_Base::operator= ( const CBlast4_request_body_Base )
private

◆ operator=() [87/99]

CBlast4_seq_part_data& CBlast4_seq_part_data::operator= ( const CBlast4_seq_part_data value)
private

◆ operator=() [88/99]

CBlast4_seq_part_data_Base& CBlast4_seq_part_data_Base::operator= ( const CBlast4_seq_part_data_Base )
private

◆ operator=() [89/99]

CBlast4_simple_alignment& CBlast4_simple_alignment::operator= ( const CBlast4_simple_alignment value)
private

◆ operator=() [90/99]

CBlast4_simple_alignment_Base& CBlast4_simple_alignment_Base::operator= ( const CBlast4_simple_alignment_Base )
private

◆ operator=() [91/99]

CBlast4_simple_results& CBlast4_simple_results::operator= ( const CBlast4_simple_results value)
private

◆ operator=() [92/99]

CBlast4_simple_results_Base& CBlast4_simple_results_Base::operator= ( const CBlast4_simple_results_Base )
private

◆ operator=() [93/99]

CBlast4_subject& CBlast4_subject::operator= ( const CBlast4_subject value)
private

◆ operator=() [94/99]

CBlast4_subject_Base& CBlast4_subject_Base::operator= ( const CBlast4_subject_Base )
private

◆ operator=() [95/99]

CBlast4_task_info& CBlast4_task_info::operator= ( const CBlast4_task_info value)
private

◆ operator=() [96/99]

CBlast4_task_info_Base& CBlast4_task_info_Base::operator= ( const CBlast4_task_info_Base )
private

◆ operator=() [97/99]

CBlast4_value& CBlast4_value::operator= ( const CBlast4_value value)
private

◆ operator=() [98/99]

CBlast4_value_Base& CBlast4_value_Base::operator= ( const CBlast4_value_Base )
private

◆ operator=() [99/99]

CBlast4Client& CBlast4Client::operator= ( const CBlast4Client value)
private

◆ Reset() [1/51]

void CBlast4_get_search_results_reply_Base::Reset ( void  )
virtual

◆ Reset() [2/51]

void CBlast4_get_search_results_request_Base::Reset ( void  )
virtual

◆ Reset() [3/51]

void CBlast4_get_search_status_reply_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blas_get_searc_statu_reply_.cpp.

References CBlast4_get_search_status_reply_Base::ResetStatus().

◆ Reset() [4/51]

void CBlast4_get_search_status_request_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blas_get_searc_statu_reque_.cpp.

References CBlast4_get_search_status_request_Base::ResetRequest_id().

◆ Reset() [5/51]

void CBlast4_get_search_strategy_request_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blas_get_searc_strat_reque_.cpp.

References CBlast4_get_search_strategy_request_Base::ResetRequest_id().

◆ Reset() [6/51]

void CBlast4_get_windowmasked_taxids_reply_Base::Reset ( void  )

◆ Reset() [7/51]

void CBlast4_alignments_for_query_Base::Reset ( void  )
virtual

◆ Reset() [8/51]

void CBlast4_archive_Base::Reset ( void  )
virtual

◆ Reset() [9/51]

void CBlast4_cutoff_Base::Reset ( void  )
virtual

◆ Reset() [10/51]

void CBlast4_database_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blast4_database_.cpp.

References CBlast4_database_Base::ResetName(), and CBlast4_database_Base::ResetType().

◆ Reset() [11/51]

void CBlast4_database_info_Base::Reset ( void  )
virtual

◆ Reset() [12/51]

void CBlast4_error_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blast4_error_.cpp.

References CBlast4_error_Base::ResetCode(), and CBlast4_error_Base::ResetMessage().

◆ Reset() [13/51]

void CBlast4_get_databases_ex_reply_Base::Reset ( void  )

◆ Reset() [14/51]

void CBlast4_get_databases_reply_Base::Reset ( void  )

◆ Reset() [15/51]

void CBlast4_get_matrices_reply_Base::Reset ( void  )

◆ Reset() [16/51]

void CBlast4_get_parameters_reply_Base::Reset ( void  )

◆ Reset() [17/51]

void CBlast4_get_paramsets_reply_Base::Reset ( void  )

◆ Reset() [18/51]

void CBlast4_get_programs_reply_Base::Reset ( void  )

◆ Reset() [19/51]

void CBlast4_get_queries_reply_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 65 of file Blast4_get_queries_reply_.cpp.

References CBlast4_get_queries_reply_Base::ResetQueries().

◆ Reset() [20/51]

void CBlast4_get_seq_parts_reply_Base::Reset ( void  )

◆ Reset() [21/51]

void CBlast4_get_sequences_request_Base::Reset ( void  )
virtual

◆ Reset() [22/51]

void CBlast4_get_sequences_reply_Base::Reset ( void  )

◆ Reset() [23/51]

void CBlast4_ka_block_Base::Reset ( void  )
virtual

◆ Reset() [24/51]

void CBlast4_mask_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 57 of file Blast4_mask_.cpp.

References CBlast4_mask_Base::ResetFrame(), and CBlast4_mask_Base::ResetLocations().

◆ Reset() [25/51]

void CBlast4_matrix_id_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blast4_matrix_id_.cpp.

References CBlast4_matrix_id_Base::ResetName(), and CBlast4_matrix_id_Base::ResetResidue_type().

◆ Reset() [26/51]

void CBlast4_parameter_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 71 of file Blast4_parameter_.cpp.

References CBlast4_parameter_Base::ResetName(), and CBlast4_parameter_Base::ResetValue().

◆ Reset() [27/51]

void CBlast4_parameter_info_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 62 of file Blast4_parameter_info_.cpp.

References CBlast4_parameter_info_Base::ResetName(), and CBlast4_parameter_info_Base::ResetType().

◆ Reset() [28/51]

void CBlast4_parameters_Base::Reset ( void  )

Reset data member.

Definition at line 51 of file Blast4_parameters_.cpp.

References CBlast4_parameters_Base::m_data, and CBlast4_parameters_Base::m_set_State.

◆ Reset() [29/51]

void CBlast4_phi_alignments_Base::Reset ( void  )
virtual

◆ Reset() [30/51]

void CBlast4_program_info_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 62 of file Blast4_program_info_.cpp.

References CBlast4_program_info_Base::ResetProgram(), and CBlast4_program_info_Base::ResetServices().

◆ Reset() [31/51]

void CBlast4_queries_Base::Reset ( void  )
virtual

◆ Reset() [32/51]

void CBlast4_queue_search_reply_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blast4_queue_search_reply_.cpp.

References CBlast4_queue_search_reply_Base::ResetRequest_id().

◆ Reset() [33/51]

void CBlast4_queue_search_request_Base::Reset ( void  )
virtual

◆ Reset() [34/51]

void CBlast4_range_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 50 of file Blast4_range_.cpp.

References CBlast4_range_Base::ResetEnd(), CBlast4_range_Base::ResetStart(), and CBlast4_range_Base::ResetStrand().

◆ Reset() [35/51]

void CBlast4_reply_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 72 of file Blast4_reply_.cpp.

References CBlast4_reply_Base::ResetBody(), and CBlast4_reply_Base::ResetErrors().

◆ Reset() [36/51]

void CBlast4_reply_body_Base::Reset ( void  )
virtual

◆ Reset() [37/51]

void CBlast4_request_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 71 of file Blast4_request_.cpp.

References CBlast4_request_Base::ResetBody(), and CBlast4_request_Base::ResetIdent().

◆ Reset() [38/51]

void CBlast4_request_body_Base::Reset ( void  )
virtual

◆ Reset() [39/51]

void CBlast4_seq_part_data_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 80 of file Blast4_seq_part_data_.cpp.

References CBlast4_seq_part_data_Base::ResetData(), and CBlast4_seq_part_data_Base::ResetId().

◆ Reset() [40/51]

void CBlast4_simple_alignment_Base::Reset ( void  )
virtual

◆ Reset() [41/51]

void CBlast4_simple_results_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 57 of file Blast4_simple_results_.cpp.

References CBlast4_simple_results_Base::ResetAll_alignments().

◆ Reset() [42/51]

void CBlast4_subject_Base::Reset ( void  )
virtual

◆ Reset() [43/51]

void CBlast4_task_info_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 62 of file Blast4_task_info_.cpp.

References CBlast4_task_info_Base::ResetDocumentation(), and CBlast4_task_info_Base::ResetName().

◆ Reset() [44/51]

void CBlast4_value_Base::Reset ( void  )
virtual

◆ Reset() [45/51]

void CBlast4_finish_params_request_Base::Reset ( void  )
virtual

◆ Reset() [46/51]

void CBlast4_get_databases_ex_request_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 68 of file Blast_get_databa_ex_reques_.cpp.

References CBlast4_get_databases_ex_request_Base::ResetParams().

◆ Reset() [47/51]

void CBlast4_get_request_info_reply_Base::Reset ( void  )
virtual

◆ Reset() [48/51]

void CBlast4_get_request_info_request_Base::Reset ( void  )
virtual

Reset the whole object.

Definition at line 56 of file Blast_get_reque_info_reque_.cpp.

References CBlast4_get_request_info_request_Base::ResetRequest_id().

◆ Reset() [49/51]

void CBlast4_get_search_info_reply_Base::Reset ( void  )
virtual

◆ Reset() [50/51]

void CBlast4_get_search_info_request_Base::Reset ( void  )
virtual

◆ Reset() [51/51]

void CBlast4_get_seq_parts_request_Base::Reset ( void  )
virtual

◆ ResetAlgorithm_options() [1/2]

void CBlast4_queue_search_request_Base::ResetAlgorithm_options ( void  )

Reset Algorithm_options data member.

Definition at line 99 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Algorithm_options.

Referenced by CBlast4_queue_search_request_Base::Reset().

◆ ResetAlgorithm_options() [2/2]

void CBlast4_get_request_info_reply_Base::ResetAlgorithm_options ( void  )

◆ ResetAlignments() [1/2]

void CBlast4_get_search_results_reply_Base::ResetAlignments ( void  )

Reset Alignments data member.

Definition at line 56 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Alignments.

Referenced by CBlast4_get_search_results_reply_Base::Reset().

◆ ResetAlignments() [2/2]

void CBlast4_alignments_for_query_Base::ResetAlignments ( void  )

◆ ResetAll_alignments()

void CBlast4_simple_results_Base::ResetAll_alignments ( void  )

Reset All_alignments data member.

Definition at line 51 of file Blast4_simple_results_.cpp.

References CBlast4_simple_results_Base::m_All_alignments, and CBlast4_simple_results_Base::m_set_State.

Referenced by CBlast4_simple_results_Base::Reset().

◆ ResetBit_score()

void CBlast4_simple_alignment_Base::ResetBit_score ( void  )
inline

◆ ResetBody() [1/2]

void CBlast4_reply_Base::ResetBody ( void  )

◆ ResetBody() [2/2]

void CBlast4_request_Base::ResetBody ( void  )

◆ ResetCode()

void CBlast4_error_Base::ResetCode ( void  )
inline

Reset Code data member.

Definition at line 252 of file Blast4_error_.hpp.

References CBlast4_error_Base::m_Code, and CBlast4_error_Base::m_set_State.

Referenced by CBlast4_error_Base::Reset().

◆ ResetCreated_by()

void CBlast4_get_request_info_reply_Base::ResetCreated_by ( void  )

◆ ResetData()

void CBlast4_seq_part_data_Base::ResetData ( void  )

◆ ResetDatabase() [1/4]

void CBlast4_database_info_Base::ResetDatabase ( void  )

◆ ResetDatabase() [2/4]

void CBlast4_get_sequences_request_Base::ResetDatabase ( void  )

◆ ResetDatabase() [3/4]

void CBlast4_get_request_info_reply_Base::ResetDatabase ( void  )

◆ ResetDatabase() [4/4]

void CBlast4_get_seq_parts_request_Base::ResetDatabase ( void  )

◆ ResetDescription()

void CBlast4_database_info_Base::ResetDescription ( void  )

Reset Description data member.

Definition at line 66 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Description, and CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetDocumentation()

void CBlast4_task_info_Base::ResetDocumentation ( void  )

Reset Documentation data member.

Definition at line 56 of file Blast4_task_info_.cpp.

References CBlast4_task_info_Base::m_Documentation, and CBlast4_task_info_Base::m_set_State.

Referenced by CBlast4_task_info_Base::Reset().

◆ ResetE_value()

void CBlast4_simple_alignment_Base::ResetE_value ( void  )
inline

◆ ResetEnd()

void CBlast4_range_Base::ResetEnd ( void  )
inline

Reset End data member.

Definition at line 296 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_End, and CBlast4_range_Base::m_set_State.

Referenced by CBlast4_range_Base::Reset().

◆ ResetErrors()

void CBlast4_reply_Base::ResetErrors ( void  )

Reset Errors data member.

Definition at line 52 of file Blast4_reply_.cpp.

References CBlast4_reply_Base::m_Errors, and CBlast4_reply_Base::m_set_State.

Referenced by CBlast4_reply_Base::Reset().

◆ ResetExtended()

void CBlast4_database_info_Base::ResetExtended ( void  )

Reset Extended data member.

Definition at line 78 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Extended.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetFormat_options() [1/2]

void CBlast4_queue_search_request_Base::ResetFormat_options ( void  )

Reset Format_options data member.

Definition at line 133 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Format_options.

Referenced by CBlast4_queue_search_request_Base::Reset().

◆ ResetFormat_options() [2/2]

void CBlast4_get_request_info_reply_Base::ResetFormat_options ( void  )

Reset Format_options data member.

Definition at line 128 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Format_options.

Referenced by CBlast4_get_request_info_reply_Base::Reset().

◆ ResetFrame()

void CBlast4_mask_Base::ResetFrame ( void  )
inline

Reset Frame data member.

Definition at line 248 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_Frame, and CBlast4_mask_Base::m_set_State.

Referenced by CBlast4_mask_Base::Reset().

◆ ResetFull_query_range()

void CBlast4_simple_alignment_Base::ResetFull_query_range ( void  )

◆ ResetFull_subject_range()

void CBlast4_simple_alignment_Base::ResetFull_subject_range ( void  )

◆ ResetGapped()

void CBlast4_ka_block_Base::ResetGapped ( void  )
inline

Reset Gapped data member.

Definition at line 427 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_Gapped, and CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::Reset().

◆ ResetH()

void CBlast4_ka_block_Base::ResetH ( void  )
inline

Reset H data member.

Definition at line 380 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_H, and CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::Reset().

◆ ResetId()

void CBlast4_seq_part_data_Base::ResetId ( void  )

◆ ResetIdent()

void CBlast4_request_Base::ResetIdent ( void  )

Reset Ident data member.

Definition at line 51 of file Blast4_request_.cpp.

References CBlast4_request_Base::m_Ident, and CBlast4_request_Base::m_set_State.

Referenced by CBlast4_request_Base::Reset().

◆ ResetInfo() [1/2]

void CBlast4_get_search_info_reply_Base::ResetInfo ( void  )

◆ ResetInfo() [2/2]

void CBlast4_get_search_info_request_Base::ResetInfo ( void  )

◆ ResetK()

void CBlast4_ka_block_Base::ResetK ( void  )
inline

Reset K data member.

Definition at line 333 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_K, and CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::Reset().

◆ ResetKa_blocks()

void CBlast4_get_search_results_reply_Base::ResetKa_blocks ( void  )

◆ ResetLambda()

void CBlast4_ka_block_Base::ResetLambda ( void  )
inline

Reset Lambda data member.

Definition at line 286 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_Lambda, and CBlast4_ka_block_Base::m_set_State.

Referenced by CBlast4_ka_block_Base::Reset().

◆ ResetLast_updated()

void CBlast4_database_info_Base::ResetLast_updated ( void  )

Reset Last_updated data member.

Definition at line 72 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Last_updated, and CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetLocations()

void CBlast4_mask_Base::ResetLocations ( void  )

Reset Locations data member.

Definition at line 51 of file Blast4_mask_.cpp.

References CBlast4_mask_Base::m_Locations, and CBlast4_mask_Base::m_set_State.

Referenced by CBlast4_mask_Base::Reset().

◆ ResetMasks()

void CBlast4_get_search_results_reply_Base::ResetMasks ( void  )

◆ ResetMessage()

void CBlast4_error_Base::ResetMessage ( void  )

Reset Message data member.

Definition at line 50 of file Blast4_error_.cpp.

References CBlast4_error_Base::m_Message, and CBlast4_error_Base::m_set_State.

Referenced by CBlast4_error_Base::Reset().

◆ ResetMessages()

void CBlast4_archive_Base::ResetMessages ( void  )

Reset Messages data member.

Definition at line 81 of file Blast4_archive_.cpp.

References CBlast4_archive_Base::m_Messages, and CBlast4_archive_Base::m_set_State.

Referenced by CBlast4_archive_Base::Reset().

◆ ResetName() [1/5]

void CBlast4_database_Base::ResetName ( void  )

Reset Name data member.

Definition at line 50 of file Blast4_database_.cpp.

References CBlast4_database_Base::m_Name, and CBlast4_database_Base::m_set_State.

Referenced by CBlast4_database_Base::Reset().

◆ ResetName() [2/5]

void CBlast4_matrix_id_Base::ResetName ( void  )

Reset Name data member.

Definition at line 50 of file Blast4_matrix_id_.cpp.

References CBlast4_matrix_id_Base::m_Name, and CBlast4_matrix_id_Base::m_set_State.

Referenced by CBlast4_matrix_id_Base::Reset().

◆ ResetName() [3/5]

void CBlast4_parameter_Base::ResetName ( void  )

Reset Name data member.

Definition at line 51 of file Blast4_parameter_.cpp.

References CBlast4_parameter_Base::m_Name, and CBlast4_parameter_Base::m_set_State.

Referenced by CBlast4_parameter_Base::Reset().

◆ ResetName() [4/5]

void CBlast4_parameter_info_Base::ResetName ( void  )

◆ ResetName() [5/5]

void CBlast4_task_info_Base::ResetName ( void  )

Reset Name data member.

Definition at line 50 of file Blast4_task_info_.cpp.

References CBlast4_task_info_Base::m_Name, and CBlast4_task_info_Base::m_set_State.

Referenced by CBlast4_task_info_Base::Reset().

◆ ResetNum_alignments()

void CBlast4_phi_alignments_Base::ResetNum_alignments ( void  )
inline

Reset Num_alignments data member.

Definition at line 208 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_Num_alignments, and CBlast4_phi_alignments_Base::m_set_State.

Referenced by CBlast4_phi_alignments_Base::Reset().

◆ ResetNum_identities()

void CBlast4_simple_alignment_Base::ResetNum_identities ( void  )
inline

◆ ResetNum_indels()

void CBlast4_simple_alignment_Base::ResetNum_indels ( void  )
inline

◆ ResetNum_sequences()

void CBlast4_database_info_Base::ResetNum_sequences ( void  )
inline

Reset Num_sequences data member.

Definition at line 629 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Num_sequences, and CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetParams() [1/2]

void CBlast4_finish_params_request_Base::ResetParams ( void  )

Reset Params data member.

Definition at line 69 of file Blast_finish_params_reques_.cpp.

References CBlast4_finish_params_request_Base::m_Params.

Referenced by CBlast4_finish_params_request_Base::Reset().

◆ ResetParams() [2/2]

void CBlast4_get_databases_ex_request_Base::ResetParams ( void  )

Reset Params data member.

Definition at line 51 of file Blast_get_databa_ex_reques_.cpp.

References CBlast4_get_databases_ex_request_Base::m_Params.

Referenced by CBlast4_get_databases_ex_request_Base::Reset().

◆ ResetParamset() [1/2]

void CBlast4_queue_search_request_Base::ResetParamset ( void  )

◆ ResetParamset() [2/2]

void CBlast4_finish_params_request_Base::ResetParamset ( void  )

◆ ResetPhi_alignments()

void CBlast4_get_search_results_reply_Base::ResetPhi_alignments ( void  )

Reset Phi_alignments data member.

Definition at line 73 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Phi_alignments.

Referenced by CBlast4_get_search_results_reply_Base::Reset().

◆ ResetProgram() [1/4]

void CBlast4_program_info_Base::ResetProgram ( void  )

Reset Program data member.

Definition at line 50 of file Blast4_program_info_.cpp.

References CBlast4_program_info_Base::m_Program, and CBlast4_program_info_Base::m_set_State.

Referenced by CBlast4_program_info_Base::Reset().

◆ ResetProgram() [2/4]

void CBlast4_queue_search_request_Base::ResetProgram ( void  )

◆ ResetProgram() [3/4]

void CBlast4_finish_params_request_Base::ResetProgram ( void  )

◆ ResetProgram() [4/4]

void CBlast4_get_request_info_reply_Base::ResetProgram ( void  )

◆ ResetProgram_options() [1/2]

void CBlast4_queue_search_request_Base::ResetProgram_options ( void  )

Reset Program_options data member.

Definition at line 116 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Program_options.

Referenced by CBlast4_queue_search_request_Base::Reset().

◆ ResetProgram_options() [2/2]

void CBlast4_get_request_info_reply_Base::ResetProgram_options ( void  )

◆ ResetPssm()

void CBlast4_get_search_results_reply_Base::ResetPssm ( void  )

Reset Pssm data member.

Definition at line 108 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Pssm.

Referenced by CBlast4_get_search_results_reply_Base::Reset().

◆ ResetQueries() [1/3]

void CBlast4_get_queries_reply_Base::ResetQueries ( void  )

◆ ResetQueries() [2/3]

void CBlast4_queue_search_request_Base::ResetQueries ( void  )

◆ ResetQueries() [3/3]

void CBlast4_get_request_info_reply_Base::ResetQueries ( void  )

◆ ResetQuery_id()

void CBlast4_alignments_for_query_Base::ResetQuery_id ( void  )

◆ ResetRequest()

void CBlast4_archive_Base::ResetRequest ( void  )

◆ ResetRequest_id() [1/7]

void CBlast4_get_search_results_request_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [2/7]

void CBlast4_get_search_status_request_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [3/7]

void CBlast4_get_search_strategy_request_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [4/7]

void CBlast4_queue_search_reply_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [5/7]

void CBlast4_get_request_info_request_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [6/7]

void CBlast4_get_search_info_reply_Base::ResetRequest_id ( void  )

◆ ResetRequest_id() [7/7]

void CBlast4_get_search_info_request_Base::ResetRequest_id ( void  )

◆ ResetResidue_type()

void CBlast4_matrix_id_Base::ResetResidue_type ( void  )
inline

Reset Residue_type data member.

Definition at line 212 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::m_Residue_type, and CBlast4_matrix_id_Base::m_set_State.

Referenced by CBlast4_matrix_id_Base::Reset().

◆ ResetResult_types()

void CBlast4_get_search_results_request_Base::ResetResult_types ( void  )
inline

◆ ResetResults()

void CBlast4_archive_Base::ResetResults ( void  )

◆ ResetSearch_stats()

void CBlast4_get_search_results_reply_Base::ResetSearch_stats ( void  )

◆ ResetSelection() [1/6]

void CBlast4_cutoff_Base::ResetSelection ( void  )
virtual

Reset the selection (set it to e_not_set).

Definition at line 56 of file Blast4_cutoff_.cpp.

References CBlast4_cutoff_Base::e_not_set, and CBlast4_cutoff_Base::m_choice.

Referenced by CBlast4_cutoff_Base::Reset().

◆ ResetSelection() [2/6]

void CBlast4_queries_Base::ResetSelection ( void  )
virtual

◆ ResetSelection() [3/6]

void CBlast4_reply_body_Base::ResetSelection ( void  )
virtual

Reset the selection (set it to e_not_set).

Definition at line 72 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Finish_params, CBlast4_reply_body_Base::e_Get_databases, CBlast4_reply_body_Base::e_Get_databases_ex, CBlast4_reply_body_Base::e_Get_matrices, CBlast4_reply_body_Base::e_Get_parameters, CBlast4_reply_body_Base::e_Get_paramsets, CBlast4_reply_body_Base::e_Get_programs, CBlast4_reply_body_Base::e_Get_protocol_info, CBlast4_reply_body_Base::e_Get_queries, CBlast4_reply_body_Base::e_Get_request_info, CBlast4_reply_body_Base::e_Get_search_info, CBlast4_reply_body_Base::e_Get_search_results, CBlast4_reply_body_Base::e_Get_sequence_parts, CBlast4_reply_body_Base::e_Get_sequences, CBlast4_reply_body_Base::e_Get_windowmasked_taxids, CBlast4_reply_body_Base::e_not_set, CBlast4_reply_body_Base::e_Queue_search, CBlast4_reply_body_Base::m_choice, and CBlast4_reply_body_Base::m_object.

Referenced by CBlast4_reply_body_Base::Reset(), CBlast4_reply_body_Base::SetFinish_params(), CBlast4_reply_body_Base::SetGet_databases(), CBlast4_reply_body_Base::SetGet_databases_ex(), CBlast4_reply_body_Base::SetGet_matrices(), CBlast4_reply_body_Base::SetGet_parameters(), CBlast4_reply_body_Base::SetGet_paramsets(), CBlast4_reply_body_Base::SetGet_programs(), CBlast4_reply_body_Base::SetGet_protocol_info(), CBlast4_reply_body_Base::SetGet_queries(), CBlast4_reply_body_Base::SetGet_request_info(), CBlast4_reply_body_Base::SetGet_search_info(), CBlast4_reply_body_Base::SetGet_search_results(), CBlast4_reply_body_Base::SetGet_sequence_parts(), CBlast4_reply_body_Base::SetGet_sequences(), CBlast4_reply_body_Base::SetGet_windowmasked_taxids(), and CBlast4_reply_body_Base::SetQueue_search().

◆ ResetSelection() [4/6]

void CBlast4_request_body_Base::ResetSelection ( void  )
virtual

◆ ResetSelection() [5/6]

void CBlast4_subject_Base::ResetSelection ( void  )
virtual

◆ ResetSelection() [6/6]

void CBlast4_value_Base::ResetSelection ( void  )
virtual

Reset the selection (set it to e_not_set).

Definition at line 65 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Big_integer_list, CBlast4_value_Base::e_Bioseq, CBlast4_value_Base::e_Bioseq_list, CBlast4_value_Base::e_Bioseq_set, CBlast4_value_Base::e_Boolean_list, CBlast4_value_Base::e_Cutoff, CBlast4_value_Base::e_Cutoff_list, CBlast4_value_Base::e_Integer_list, CBlast4_value_Base::e_Matrix, CBlast4_value_Base::e_Matrix_list, CBlast4_value_Base::e_not_set, CBlast4_value_Base::e_Query_mask, CBlast4_value_Base::e_Real_list, CBlast4_value_Base::e_Seq_align, CBlast4_value_Base::e_Seq_align_list, CBlast4_value_Base::e_Seq_align_set, CBlast4_value_Base::e_Seq_id, CBlast4_value_Base::e_Seq_id_list, CBlast4_value_Base::e_Seq_loc, CBlast4_value_Base::e_Seq_loc_list, CBlast4_value_Base::e_Strand_type_list, CBlast4_value_Base::e_String, CBlast4_value_Base::e_String_list, CBlast4_value_Base::m_Big_integer_list, CBlast4_value_Base::m_Bioseq_list, CBlast4_value_Base::m_Boolean_list, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_Cutoff_list, CBlast4_value_Base::m_Integer_list, CBlast4_value_Base::m_Matrix_list, CBlast4_value_Base::m_object, CBlast4_value_Base::m_Real_list, CBlast4_value_Base::m_Seq_align_list, CBlast4_value_Base::m_Seq_id_list, CBlast4_value_Base::m_Seq_loc_list, CBlast4_value_Base::m_Strand_type_list, CBlast4_value_Base::m_string, and CBlast4_value_Base::m_String_list.

Referenced by CBlast4_value_Base::Reset(), CBlast4_value_Base::SetBioseq(), CBlast4_value_Base::SetBioseq_set(), CBlast4_value_Base::SetCutoff(), CBlast4_value_Base::SetMatrix(), CBlast4_value_Base::SetQuery_mask(), CBlast4_value_Base::SetSeq_align(), CBlast4_value_Base::SetSeq_align_set(), CBlast4_value_Base::SetSeq_id(), and CBlast4_value_Base::SetSeq_loc().

◆ ResetSeq_ids()

void CBlast4_get_sequences_request_Base::ResetSeq_ids ( void  )

◆ ResetSeq_locations()

void CBlast4_get_seq_parts_request_Base::ResetSeq_locations ( void  )

◆ ResetSeq_locs()

void CBlast4_phi_alignments_Base::ResetSeq_locs ( void  )

◆ ResetSeqtech()

void CBlast4_database_info_Base::ResetSeqtech ( void  )
inline

Reset Seqtech data member.

Definition at line 676 of file Blast4_database_info_.hpp.

References int, CBlast4_database_info_Base::m_Seqtech, and CBlast4_database_info_Base::m_set_State.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetService() [1/3]

void CBlast4_queue_search_request_Base::ResetService ( void  )

◆ ResetService() [2/3]

void CBlast4_finish_params_request_Base::ResetService ( void  )

◆ ResetService() [3/3]

void CBlast4_get_request_info_reply_Base::ResetService ( void  )

◆ ResetServices()

void CBlast4_program_info_Base::ResetServices ( void  )

Reset Services data member.

Definition at line 56 of file Blast4_program_info_.cpp.

References CBlast4_program_info_Base::m_Services, and CBlast4_program_info_Base::m_set_State.

Referenced by CBlast4_program_info_Base::Reset().

◆ ResetSimple_results()

void CBlast4_get_search_results_reply_Base::ResetSimple_results ( void  )

Reset Simple_results data member.

Definition at line 125 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Simple_results.

Referenced by CBlast4_get_search_results_reply_Base::Reset().

◆ ResetSkip_seq_data()

void CBlast4_get_sequences_request_Base::ResetSkip_seq_data ( void  )
inline

◆ ResetStart()

void CBlast4_range_Base::ResetStart ( void  )
inline

Reset Start data member.

Definition at line 249 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State, and CBlast4_range_Base::m_Start.

Referenced by CBlast4_range_Base::Reset().

◆ ResetStatus()

void CBlast4_get_search_status_reply_Base::ResetStatus ( void  )

◆ ResetStrand()

void CBlast4_range_Base::ResetStrand ( void  )
inline

Reset Strand data member.

Definition at line 343 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State, and CBlast4_range_Base::m_Strand.

Referenced by CBlast4_range_Base::Reset().

◆ ResetSubject()

void CBlast4_queue_search_request_Base::ResetSubject ( void  )

◆ ResetSubject_id()

void CBlast4_simple_alignment_Base::ResetSubject_id ( void  )

◆ ResetSubjects()

void CBlast4_get_request_info_reply_Base::ResetSubjects ( void  )

Reset Subjects data member.

Definition at line 145 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Subjects.

Referenced by CBlast4_get_request_info_reply_Base::Reset().

◆ ResetTarget_only()

void CBlast4_get_sequences_request_Base::ResetTarget_only ( void  )
inline

◆ ResetTaxid()

void CBlast4_database_info_Base::ResetTaxid ( void  )
inline

◆ ResetTotal_length()

void CBlast4_database_info_Base::ResetTotal_length ( void  )
inline

Reset Total_length data member.

Definition at line 582 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State, and CBlast4_database_info_Base::m_Total_length.

Referenced by CBlast4_database_info_Base::Reset().

◆ ResetType() [1/2]

void CBlast4_database_Base::ResetType ( void  )
inline

Reset Type data member.

Definition at line 259 of file Blast4_database_.hpp.

References CBlast4_database_Base::m_set_State, and CBlast4_database_Base::m_Type.

Referenced by CBlast4_database_Base::Reset().

◆ ResetType() [2/2]

void CBlast4_parameter_info_Base::ResetType ( void  )

◆ ResetValue()

void CBlast4_parameter_Base::ResetValue ( void  )

◆ Select() [1/12]

void CBlast4_cutoff_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [2/12]

void CBlast4_queries_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [3/12]

void CBlast4_reply_body_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [4/12]

void CBlast4_request_body_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [5/12]

void CBlast4_subject_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [6/12]

void CBlast4_value_Base::Select ( E_Choice  index,
EResetVariant  reset,
CObjectMemoryPool pool 
)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [7/12]

void CBlast4_cutoff_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

Select the requested variant if needed.

Parameters
indexNew selection state.
resetFlag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CBlast4_cutoff_Base::SetE_value(), and CBlast4_cutoff_Base::SetRaw_score().

◆ Select() [8/12]

void CBlast4_queries_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

Select the requested variant if needed.

Parameters
indexNew selection state.
resetFlag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CBlast4_queries_Base::SetBioseq_set(), CBlast4_queries_Base::SetPssm(), and CBlast4_queries_Base::SetSeq_loc_list().

◆ Select() [9/12]

void CBlast4_reply_body_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

◆ Select() [10/12]

void CBlast4_request_body_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

◆ Select() [11/12]

void CBlast4_subject_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

Select the requested variant if needed.

Parameters
indexNew selection state.
resetFlag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CBlast4_subject_Base::SetDatabase(), CBlast4_subject_Base::SetSeq_loc_list(), and CBlast4_subject_Base::SetSequences().

◆ Select() [12/12]

void CBlast4_value_Base::Select ( E_Choice  index,
EResetVariant  reset = eDoResetVariant 
)

◆ SelectionName() [1/6]

NCBI_NS_STD::string CBlast4_cutoff_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 82 of file Blast4_cutoff_.cpp.

References CBlast4_cutoff_Base::sm_SelectionNames.

◆ SelectionName() [2/6]

NCBI_NS_STD::string CBlast4_queries_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 100 of file Blast4_queries_.cpp.

References CBlast4_queries_Base::sm_SelectionNames.

◆ SelectionName() [3/6]

NCBI_NS_STD::string CBlast4_reply_body_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 176 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::sm_SelectionNames.

◆ SelectionName() [4/6]

NCBI_NS_STD::string CBlast4_request_body_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 140 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::sm_SelectionNames.

◆ SelectionName() [5/6]

NCBI_NS_STD::string CBlast4_subject_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 101 of file Blast4_subject_.cpp.

References CBlast4_subject_Base::sm_SelectionNames.

◆ SelectionName() [6/6]

NCBI_NS_STD::string CBlast4_value_Base::SelectionName ( E_Choice  index)
static

Retrieve selection name (for diagnostic purposes).

Parameters
indexOne of possible selection states.
Returns
Name string.

Definition at line 245 of file Blast4_value_.cpp.

References CBlast4_value_Base::sm_SelectionNames.

◆ Set() [1/14]

CBlast4_request & CBlast4_get_search_strategy_reply_Base::Set ( void  )
inline

Definition at line 109 of file Blas_get_searc_strat_reply_.hpp.

◆ Set() [2/14]

CBlast4_get_windowmasked_taxids_reply_Base::Tdata & CBlast4_get_windowmasked_taxids_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 166 of file Blas_get_windo_taxid_reply_.hpp.

References CBlast4_get_windowmasked_taxids_reply_Base::m_data, and CBlast4_get_windowmasked_taxids_reply_Base::m_set_State.

◆ Set() [3/14]

CBlast4_parameters & CBlast4_finish_params_reply_Base::Set ( void  )
inline

Definition at line 107 of file Blast4_finish_params_reply_.hpp.

◆ Set() [4/14]

CBlast4_get_databases_ex_reply_Base::Tdata & CBlast4_get_databases_ex_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_databa_ex_reply_.hpp.

References CBlast4_get_databases_ex_reply_Base::m_data, and CBlast4_get_databases_ex_reply_Base::m_set_State.

◆ Set() [5/14]

CBlast4_get_databases_reply_Base::Tdata & CBlast4_get_databases_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_databases_reply_.hpp.

References CBlast4_get_databases_reply_Base::m_data, and CBlast4_get_databases_reply_Base::m_set_State.

◆ Set() [6/14]

CBlast4_get_matrices_reply_Base::Tdata & CBlast4_get_matrices_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_matrices_reply_.hpp.

References CBlast4_get_matrices_reply_Base::m_data, and CBlast4_get_matrices_reply_Base::m_set_State.

◆ Set() [7/14]

CBlast4_get_parameters_reply_Base::Tdata & CBlast4_get_parameters_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_parameter_reply_.hpp.

References CBlast4_get_parameters_reply_Base::m_data, and CBlast4_get_parameters_reply_Base::m_set_State.

◆ Set() [8/14]

CBlast4_get_paramsets_reply_Base::Tdata & CBlast4_get_paramsets_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 173 of file Blast4_get_paramsets_reply_.hpp.

References CBlast4_get_paramsets_reply_Base::m_data, and CBlast4_get_paramsets_reply_Base::m_set_State.

◆ Set() [9/14]

CBlast4_get_programs_reply_Base::Tdata & CBlast4_get_programs_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_programs_reply_.hpp.

References CBlast4_get_programs_reply_Base::m_data, and CBlast4_get_programs_reply_Base::m_set_State.

◆ Set() [10/14]

CBlast4_get_seq_parts_reply_Base::Tdata & CBlast4_get_seq_parts_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_seq_parts_reply_.hpp.

References CBlast4_get_seq_parts_reply_Base::m_data, and CBlast4_get_seq_parts_reply_Base::m_set_State.

◆ Set() [11/14]

CBlast4_get_sequences_reply_Base::Tdata & CBlast4_get_sequences_reply_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_get_sequences_reply_.hpp.

References CBlast4_get_sequences_reply_Base::m_data, and CBlast4_get_sequences_reply_Base::m_set_State.

◆ Set() [12/14]

CBlast4_parameters_Base::Tdata & CBlast4_parameters_Base::Set ( void  )
inline

Assign a value to data member.

Returns
Reference to the data value.

Definition at line 170 of file Blast4_parameters_.hpp.

References CBlast4_parameters_Base::m_data, and CBlast4_parameters_Base::m_set_State.

Referenced by CBlast4_parameters::Add().

◆ Set() [13/14]

CBlast4_parameters & CBlast4_get_protocol_info_reply_Base::Set ( void  )
inline

Definition at line 107 of file Blast_get_proto_info_reply_.hpp.

◆ Set() [14/14]

CBlast4_parameters & CBlast4_get_protocol_info_request_Base::Set ( void  )
inline

Definition at line 108 of file Blast_get_proto_info_reque_.hpp.

◆ SetAlgorithm_options() [1/4]

void CBlast4_queue_search_request_Base::SetAlgorithm_options ( CBlast4_queue_search_request_Base::TAlgorithm_options value)

Assign a value to Algorithm_options data member.

Parameters
valueReference to value.

Definition at line 104 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Algorithm_options, and value.

Referenced by CImportStrategy::GetAlgoOptions(), and CExportStrategy::x_Process_BlastOptions().

◆ SetAlgorithm_options() [2/4]

void CBlast4_get_request_info_reply_Base::SetAlgorithm_options ( CBlast4_get_request_info_reply_Base::TAlgorithm_options value)

Assign a value to Algorithm_options data member.

Parameters
valueReference to value.

Definition at line 109 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Algorithm_options, and value.

◆ SetAlgorithm_options() [3/4]

CBlast4_queue_search_request_Base::TAlgorithm_options & CBlast4_queue_search_request_Base::SetAlgorithm_options ( void  )

Assign a value to Algorithm_options data member.

Returns
Reference to the data value.

Definition at line 109 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Algorithm_options.

◆ SetAlgorithm_options() [4/4]

CBlast4_get_request_info_reply_Base::TAlgorithm_options & CBlast4_get_request_info_reply_Base::SetAlgorithm_options ( void  )
inline

Assign a value to Algorithm_options data member.

Returns
Reference to the data value.

Definition at line 710 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Algorithm_options, and CBlast4_get_request_info_reply_Base::ResetAlgorithm_options().

◆ SetAlignments() [1/3]

void CBlast4_get_search_results_reply_Base::SetAlignments ( CBlast4_get_search_results_reply_Base::TAlignments value)

Assign a value to Alignments data member.

Parameters
valueReference to value.

Definition at line 61 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Alignments, and value.

◆ SetAlignments() [2/3]

CBlast4_get_search_results_reply_Base::TAlignments & CBlast4_get_search_results_reply_Base::SetAlignments ( void  )

Assign a value to Alignments data member.

Returns
Reference to the data value.

Definition at line 66 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Alignments.

◆ SetAlignments() [3/3]

CBlast4_alignments_for_query_Base::TAlignments & CBlast4_alignments_for_query_Base::SetAlignments ( void  )
inline

Assign a value to Alignments data member.

Returns
Reference to the data value.

Definition at line 267 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::m_Alignments, and CBlast4_alignments_for_query_Base::m_set_State.

◆ SetAll_alignments()

CBlast4_simple_results_Base::TAll_alignments & CBlast4_simple_results_Base::SetAll_alignments ( void  )
inline

Assign a value to All_alignments data member.

Returns
Reference to the data value.

Definition at line 176 of file Blast4_simple_results_.hpp.

References CBlast4_simple_results_Base::m_All_alignments, and CBlast4_simple_results_Base::m_set_State.

◆ SetBig_integer() [1/2]

void CBlast4_value_Base::SetBig_integer ( CBlast4_value_Base::TBig_integer  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 956 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Big_integer, eDoNotResetVariant, CBlast4_value_Base::m_Big_integer, CBlast4_value_Base::Select(), and value.

◆ SetBig_integer() [2/2]

CBlast4_value_Base::TBig_integer & CBlast4_value_Base::SetBig_integer ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 949 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Big_integer, eDoNotResetVariant, CBlast4_value_Base::m_Big_integer, and CBlast4_value_Base::Select().

Referenced by CBlast4_parameters::Add().

◆ SetBig_integer_list()

CBlast4_value_Base::TBig_integer_list & CBlast4_value_Base::SetBig_integer_list ( void  )
inline

◆ SetBioseq() [1/2]

void CBlast4_value_Base::SetBioseq ( CBlast4_value_Base::TBioseq value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 267 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Bioseq, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetBioseq() [2/2]

CBlast4_value_Base::TBioseq & CBlast4_value_Base::SetBioseq ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 261 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Bioseq, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetBioseq_list()

CBlast4_value_Base::TBioseq_list & CBlast4_value_Base::SetBioseq_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1160 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Bioseq_list, eDoNotResetVariant, CBlast4_value_Base::m_Bioseq_list, and CBlast4_value_Base::Select().

◆ SetBioseq_set() [1/4]

void CBlast4_queries_Base::SetBioseq_set ( CBlast4_queries_Base::TBioseq_set value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 144 of file Blast4_queries_.cpp.

References CObject::AddReference(), CBlast4_queries_Base::e_Bioseq_set, CBlast4_queries_Base::m_choice, CBlast4_queries_Base::m_object, CBlast4_queries_Base::ResetSelection(), and value.

◆ SetBioseq_set() [2/4]

void CBlast4_value_Base::SetBioseq_set ( CBlast4_value_Base::TBioseq_set value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 405 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Bioseq_set, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetBioseq_set() [3/4]

CBlast4_queries_Base::TBioseq_set & CBlast4_queries_Base::SetBioseq_set ( void  )

◆ SetBioseq_set() [4/4]

CBlast4_value_Base::TBioseq_set & CBlast4_value_Base::SetBioseq_set ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 399 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Bioseq_set, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetBit_score() [1/2]

void CBlast4_simple_alignment_Base::SetBit_score ( CBlast4_simple_alignment_Base::TBit_score  value)
inline

Assign a value to Bit_score data member.

Parameters
valueValue to assign

Definition at line 534 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Bit_score, CBlast4_simple_alignment_Base::m_set_State, and value.

◆ SetBit_score() [2/2]

CBlast4_simple_alignment_Base::TBit_score & CBlast4_simple_alignment_Base::SetBit_score ( void  )
inline

Assign a value to Bit_score data member.

Returns
Reference to the data value.

Definition at line 541 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetBit_score(), CBlast4_simple_alignment_Base::m_Bit_score, CBlast4_simple_alignment_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetBody() [1/4]

void CBlast4_reply_Base::SetBody ( CBlast4_reply_Base::TBody value)

Assign a value to Body data member.

Parameters
valueReference to value.

Definition at line 67 of file Blast4_reply_.cpp.

References CBlast4_reply_Base::m_Body, and value.

Referenced by CBlast4Client_Base::x_Choice().

◆ SetBody() [2/4]

void CBlast4_request_Base::SetBody ( CBlast4_request_Base::TBody value)

◆ SetBody() [3/4]

CBlast4_reply_Base::TBody & CBlast4_reply_Base::SetBody ( void  )
inline

Assign a value to Body data member.

Returns
Reference to the data value.

Definition at line 282 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_Body, and CBlast4_reply_Base::ResetBody().

◆ SetBody() [4/4]

CBlast4_request_Base::TBody & CBlast4_request_Base::SetBody ( void  )
inline

Assign a value to Body data member.

Returns
Reference to the data value.

Definition at line 313 of file Blast4_request_.hpp.

References CBlast4_request_Base::m_Body, and CBlast4_request_Base::ResetBody().

◆ SetBoolean() [1/2]

void CBlast4_value_Base::SetBoolean ( CBlast4_value_Base::TBoolean  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 989 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Boolean, eDoNotResetVariant, CBlast4_value_Base::m_Boolean, CBlast4_value_Base::Select(), and value.

◆ SetBoolean() [2/2]

CBlast4_value_Base::TBoolean & CBlast4_value_Base::SetBoolean ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 982 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Boolean, eDoNotResetVariant, CBlast4_value_Base::m_Boolean, and CBlast4_value_Base::Select().

Referenced by CBlast4_parameters::Add().

◆ SetBoolean_list()

CBlast4_value_Base::TBoolean_list & CBlast4_value_Base::SetBoolean_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1180 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Boolean_list, eDoNotResetVariant, CBlast4_value_Base::m_Boolean_list, and CBlast4_value_Base::Select().

◆ SetCode() [1/2]

void CBlast4_error_Base::SetCode ( CBlast4_error_Base::TCode  value)
inline

Assign a value to Code data member.

Parameters
valueValue to assign

Definition at line 268 of file Blast4_error_.hpp.

References CBlast4_error_Base::m_Code, CBlast4_error_Base::m_set_State, and value.

◆ SetCode() [2/2]

CBlast4_error_Base::TCode & CBlast4_error_Base::SetCode ( void  )
inline

Assign a value to Code data member.

Returns
Reference to the data value.

Definition at line 275 of file Blast4_error_.hpp.

References CBlast4_error_Base::IsSetCode(), CBlast4_error_Base::m_Code, CBlast4_error_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetCreated_by() [1/3]

void CBlast4_get_request_info_reply_Base::SetCreated_by ( const TCreated_by value)
inline

Assign a value to Created_by data member.

Parameters
valueValue to assign

Definition at line 633 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Created_by, CBlast4_get_request_info_reply_Base::m_set_State, and value.

◆ SetCreated_by() [2/3]

void CBlast4_get_request_info_reply_Base::SetCreated_by ( CBlast4_get_request_info_reply_Base::TCreated_by &&  value)
inline

◆ SetCreated_by() [3/3]

CBlast4_get_request_info_reply_Base::TCreated_by & CBlast4_get_request_info_reply_Base::SetCreated_by ( void  )
inline

◆ SetCutoff() [1/2]

void CBlast4_value_Base::SetCutoff ( CBlast4_value_Base::TCutoff value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 289 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Cutoff, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetCutoff() [2/2]

CBlast4_value_Base::TCutoff & CBlast4_value_Base::SetCutoff ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 283 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Cutoff, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

Referenced by CBlast4_parameters::Add().

◆ SetCutoff_list()

CBlast4_value_Base::TCutoff_list & CBlast4_value_Base::SetCutoff_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1200 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Cutoff_list, eDoNotResetVariant, CBlast4_value_Base::m_Cutoff_list, and CBlast4_value_Base::Select().

◆ SetData() [1/2]

void CBlast4_seq_part_data_Base::SetData ( CBlast4_seq_part_data_Base::TData value)

Assign a value to Data data member.

Parameters
valueReference to value.

Definition at line 75 of file Blast4_seq_part_data_.cpp.

References CBlast4_seq_part_data_Base::m_Data, CRef< C, Locker >::Reset(), and value.

◆ SetData() [2/2]

CBlast4_seq_part_data_Base::TData & CBlast4_seq_part_data_Base::SetData ( void  )
inline

Assign a value to Data data member.

Returns
Reference to the data value.

Definition at line 254 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Data, and CBlast4_seq_part_data_Base::ResetData().

◆ SetDatabase() [1/10]

void CBlast4_subject_Base::SetDatabase ( const TDatabase value)

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 111 of file Blast4_subject_.cpp.

References CBlast4_subject_Base::e_Database, eDoNotResetVariant, CBlast4_subject_Base::m_string, CBlast4_subject_Base::Select(), and value.

◆ SetDatabase() [2/10]

void CBlast4_database_info_Base::SetDatabase ( CBlast4_database_info_Base::TDatabase value)

Assign a value to Database data member.

Parameters
valueReference to value.

Definition at line 61 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Database, and value.

◆ SetDatabase() [3/10]

void CBlast4_get_sequences_request_Base::SetDatabase ( CBlast4_get_sequences_request_Base::TDatabase value)

Assign a value to Database data member.

Parameters
valueReference to value.

Definition at line 61 of file Blast4_get_sequenc_request_.cpp.

References CBlast4_get_sequences_request_Base::m_Database, and value.

Referenced by s_BuildGetSeqRequest().

◆ SetDatabase() [4/10]

void CBlast4_get_request_info_reply_Base::SetDatabase ( CBlast4_get_request_info_reply_Base::TDatabase value)

Assign a value to Database data member.

Parameters
valueReference to value.

Definition at line 63 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Database, and value.

◆ SetDatabase() [5/10]

void CBlast4_get_seq_parts_request_Base::SetDatabase ( CBlast4_get_seq_parts_request_Base::TDatabase value)

Assign a value to Database data member.

Parameters
valueReference to value.

Definition at line 61 of file Blast_get_seq_parts_reques_.cpp.

References CBlast4_get_seq_parts_request_Base::m_Database, and value.

Referenced by s_BuildGetSeqPartsRequest().

◆ SetDatabase() [6/10]

CBlast4_database_info_Base::TDatabase & CBlast4_database_info_Base::SetDatabase ( void  )
inline

Assign a value to Database data member.

Returns
Reference to the data value.

Definition at line 467 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Database, and CBlast4_database_info_Base::ResetDatabase().

◆ SetDatabase() [7/10]

CBlast4_get_sequences_request_Base::TDatabase & CBlast4_get_sequences_request_Base::SetDatabase ( void  )
inline

Assign a value to Database data member.

Returns
Reference to the data value.

Definition at line 309 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Database, and CBlast4_get_sequences_request_Base::ResetDatabase().

◆ SetDatabase() [8/10]

CBlast4_subject_Base::TDatabase & CBlast4_subject_Base::SetDatabase ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 299 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::e_Database, eDoNotResetVariant, CBlast4_subject_Base::m_string, and CBlast4_subject_Base::Select().

Referenced by CRemoteBlast::SetDatabase(), and CExportStrategy::x_Process_SearchDb().

◆ SetDatabase() [9/10]

CBlast4_get_request_info_reply_Base::TDatabase & CBlast4_get_request_info_reply_Base::SetDatabase ( void  )
inline

Assign a value to Database data member.

Returns
Reference to the data value.

Definition at line 509 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Database, and CBlast4_get_request_info_reply_Base::ResetDatabase().

◆ SetDatabase() [10/10]

CBlast4_get_seq_parts_request_Base::TDatabase & CBlast4_get_seq_parts_request_Base::SetDatabase ( void  )
inline

Assign a value to Database data member.

Returns
Reference to the data value.

Definition at line 225 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_Database, and CBlast4_get_seq_parts_request_Base::ResetDatabase().

◆ SetDefaultRequest() [1/2]

void CBlast4Client_Base::SetDefaultRequest ( const TRequest request)
inlinevirtual

Definition at line 190 of file blastclient_.hpp.

References CBlast4Client_Base::m_DefaultRequest.

◆ SetDefaultRequest() [2/2]

CBlast4Client_Base::TRequest & CBlast4Client_Base::SetDefaultRequest ( void  )
inlinevirtual

Definition at line 184 of file blastclient_.hpp.

References CBlast4Client_Base::m_DefaultRequest.

◆ SetDefaultSkip_seq_data()

void CBlast4_get_sequences_request_Base::SetDefaultSkip_seq_data ( void  )
inline

Assign default value to Skip_seq_data data member.

Definition at line 362 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::ResetSkip_seq_data().

◆ SetDescription() [1/3]

void CBlast4_database_info_Base::SetDescription ( const TDescription value)
inline

Assign a value to Description data member.

Parameters
valueValue to assign

Definition at line 497 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Description, CBlast4_database_info_Base::m_set_State, and value.

◆ SetDescription() [2/3]

void CBlast4_database_info_Base::SetDescription ( CBlast4_database_info_Base::TDescription &&  value)
inline

◆ SetDescription() [3/3]

CBlast4_database_info_Base::TDescription & CBlast4_database_info_Base::SetDescription ( void  )
inline

Assign a value to Description data member.

Returns
Reference to the data value.

Definition at line 511 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetDescription(), CBlast4_database_info_Base::m_Description, CBlast4_database_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetDocumentation() [1/3]

void CBlast4_task_info_Base::SetDocumentation ( const TDocumentation value)
inline

Assign a value to Documentation data member.

Parameters
valueValue to assign

Definition at line 271 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::m_Documentation, CBlast4_task_info_Base::m_set_State, and value.

◆ SetDocumentation() [2/3]

void CBlast4_task_info_Base::SetDocumentation ( CBlast4_task_info_Base::TDocumentation &&  value)
inline

◆ SetDocumentation() [3/3]

CBlast4_task_info_Base::TDocumentation & CBlast4_task_info_Base::SetDocumentation ( void  )
inline

Assign a value to Documentation data member.

Returns
Reference to the data value.

Definition at line 285 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::IsSetDocumentation(), CBlast4_task_info_Base::m_Documentation, CBlast4_task_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetE_value() [1/4]

void CBlast4_cutoff_Base::SetE_value ( CBlast4_cutoff_Base::TE_value  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 316 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_E_value, eDoNotResetVariant, CBlast4_cutoff_Base::m_E_value, CBlast4_cutoff_Base::Select(), and value.

◆ SetE_value() [2/4]

void CBlast4_simple_alignment_Base::SetE_value ( CBlast4_simple_alignment_Base::TE_value  value)
inline

Assign a value to E_value data member.

Parameters
valueValue to assign

Definition at line 487 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_E_value, CBlast4_simple_alignment_Base::m_set_State, and value.

◆ SetE_value() [3/4]

CBlast4_cutoff_Base::TE_value & CBlast4_cutoff_Base::SetE_value ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 309 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_E_value, eDoNotResetVariant, CBlast4_cutoff_Base::m_E_value, and CBlast4_cutoff_Base::Select().

◆ SetE_value() [4/4]

CBlast4_simple_alignment_Base::TE_value & CBlast4_simple_alignment_Base::SetE_value ( void  )
inline

Assign a value to E_value data member.

Returns
Reference to the data value.

Definition at line 494 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetE_value(), CBlast4_simple_alignment_Base::m_E_value, CBlast4_simple_alignment_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetEnd() [1/2]

void CBlast4_range_Base::SetEnd ( CBlast4_range_Base::TEnd  value)
inline

Assign a value to End data member.

Parameters
valueValue to assign

Definition at line 312 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_End, CBlast4_range_Base::m_set_State, and value.

◆ SetEnd() [2/2]

CBlast4_range_Base::TEnd & CBlast4_range_Base::SetEnd ( void  )
inline

Assign a value to End data member.

Returns
Reference to the data value.

Definition at line 319 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetEnd(), CBlast4_range_Base::m_End, CBlast4_range_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetErrors()

CBlast4_reply_Base::TErrors & CBlast4_reply_Base::SetErrors ( void  )
inline

Assign a value to Errors data member.

Returns
Reference to the data value.

Definition at line 254 of file Blast4_reply_.hpp.

References CBlast4_reply_Base::m_Errors, and CBlast4_reply_Base::m_set_State.

◆ SetExtended() [1/2]

void CBlast4_database_info_Base::SetExtended ( CBlast4_database_info_Base::TExtended value)

Assign a value to Extended data member.

Parameters
valueReference to value.

Definition at line 83 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Extended, and value.

◆ SetExtended() [2/2]

CBlast4_database_info_Base::TExtended & CBlast4_database_info_Base::SetExtended ( void  )

Assign a value to Extended data member.

Returns
Reference to the data value.

Definition at line 88 of file Blast4_database_info_.cpp.

References CBlast4_database_info_Base::m_Extended.

◆ SetFinish_params() [1/4]

void CBlast4_reply_body_Base::SetFinish_params ( CBlast4_reply_body_Base::TFinish_params value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 198 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Finish_params, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetFinish_params() [2/4]

void CBlast4_request_body_Base::SetFinish_params ( CBlast4_request_body_Base::TFinish_params value)

◆ SetFinish_params() [3/4]

CBlast4_reply_body_Base::TFinish_params & CBlast4_reply_body_Base::SetFinish_params ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 192 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Finish_params, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskFinish_params().

◆ SetFinish_params() [4/4]

CBlast4_request_body_Base::TFinish_params & CBlast4_request_body_Base::SetFinish_params ( void  )

◆ SetFormat_options() [1/4]

void CBlast4_queue_search_request_Base::SetFormat_options ( CBlast4_queue_search_request_Base::TFormat_options value)

Assign a value to Format_options data member.

Parameters
valueReference to value.

Definition at line 138 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Format_options, and value.

Referenced by CImportStrategy::GetWebFormatOptions(), and CExportStrategy::x_AddPsiNumOfIterationsToFormatOptions().

◆ SetFormat_options() [2/4]

void CBlast4_get_request_info_reply_Base::SetFormat_options ( CBlast4_get_request_info_reply_Base::TFormat_options value)

Assign a value to Format_options data member.

Parameters
valueReference to value.

Definition at line 133 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Format_options, and value.

◆ SetFormat_options() [3/4]

CBlast4_queue_search_request_Base::TFormat_options & CBlast4_queue_search_request_Base::SetFormat_options ( void  )

Assign a value to Format_options data member.

Returns
Reference to the data value.

Definition at line 143 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Format_options.

◆ SetFormat_options() [4/4]

CBlast4_get_request_info_reply_Base::TFormat_options & CBlast4_get_request_info_reply_Base::SetFormat_options ( void  )

Assign a value to Format_options data member.

Returns
Reference to the data value.

Definition at line 138 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Format_options.

◆ SetFrame() [1/2]

void CBlast4_mask_Base::SetFrame ( CBlast4_mask_Base::TFrame  value)
inline

Assign a value to Frame data member.

Parameters
valueValue to assign

Definition at line 264 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_Frame, CBlast4_mask_Base::m_set_State, and value.

◆ SetFrame() [2/2]

CBlast4_mask_Base::TFrame & CBlast4_mask_Base::SetFrame ( void  )
inline

Assign a value to Frame data member.

Returns
Reference to the data value.

Definition at line 271 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::IsSetFrame(), CBlast4_mask_Base::m_Frame, CBlast4_mask_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetFull_query_range() [1/2]

void CBlast4_simple_alignment_Base::SetFull_query_range ( CBlast4_simple_alignment_Base::TFull_query_range value)

Assign a value to Full_query_range data member.

Parameters
valueReference to value.

Definition at line 66 of file Blast4_simple_alignment_.cpp.

References CBlast4_simple_alignment_Base::m_Full_query_range, and value.

◆ SetFull_query_range() [2/2]

CBlast4_simple_alignment_Base::TFull_query_range & CBlast4_simple_alignment_Base::SetFull_query_range ( void  )
inline

Assign a value to Full_query_range data member.

Returns
Reference to the data value.

Definition at line 668 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_query_range, and CBlast4_simple_alignment_Base::ResetFull_query_range().

◆ SetFull_subject_range() [1/2]

void CBlast4_simple_alignment_Base::SetFull_subject_range ( CBlast4_simple_alignment_Base::TFull_subject_range value)

Assign a value to Full_subject_range data member.

Parameters
valueReference to value.

Definition at line 80 of file Blast4_simple_alignment_.cpp.

References CBlast4_simple_alignment_Base::m_Full_subject_range, and value.

◆ SetFull_subject_range() [2/2]

CBlast4_simple_alignment_Base::TFull_subject_range & CBlast4_simple_alignment_Base::SetFull_subject_range ( void  )
inline

Assign a value to Full_subject_range data member.

Returns
Reference to the data value.

Definition at line 698 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Full_subject_range, and CBlast4_simple_alignment_Base::ResetFull_subject_range().

◆ SetGapped() [1/2]

void CBlast4_ka_block_Base::SetGapped ( CBlast4_ka_block_Base::TGapped  value)
inline

Assign a value to Gapped data member.

Parameters
valueValue to assign

Definition at line 443 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_Gapped, CBlast4_ka_block_Base::m_set_State, and value.

◆ SetGapped() [2/2]

CBlast4_ka_block_Base::TGapped & CBlast4_ka_block_Base::SetGapped ( void  )
inline

Assign a value to Gapped data member.

Returns
Reference to the data value.

Definition at line 450 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetGapped(), CBlast4_ka_block_Base::m_Gapped, CBlast4_ka_block_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetGet_databases() [1/3]

void CBlast4_reply_body_Base::SetGet_databases ( CBlast4_reply_body_Base::TGet_databases value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 220 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_databases, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_databases() [2/3]

CBlast4_reply_body_Base::TGet_databases & CBlast4_reply_body_Base::SetGet_databases ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 214 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_databases, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_databases().

◆ SetGet_databases() [3/3]

void CBlast4_request_body_Base::SetGet_databases ( void  )
inline

◆ SetGet_databases_ex() [1/4]

void CBlast4_reply_body_Base::SetGet_databases_ex ( CBlast4_reply_body_Base::TGet_databases_ex value)

◆ SetGet_databases_ex() [2/4]

void CBlast4_request_body_Base::SetGet_databases_ex ( CBlast4_request_body_Base::TGet_databases_ex value)

◆ SetGet_databases_ex() [3/4]

CBlast4_reply_body_Base::TGet_databases_ex & CBlast4_reply_body_Base::SetGet_databases_ex ( void  )

◆ SetGet_databases_ex() [4/4]

CBlast4_request_body_Base::TGet_databases_ex & CBlast4_request_body_Base::SetGet_databases_ex ( void  )

◆ SetGet_matrices() [1/3]

void CBlast4_reply_body_Base::SetGet_matrices ( CBlast4_reply_body_Base::TGet_matrices value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 242 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_matrices, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_matrices() [2/3]

CBlast4_reply_body_Base::TGet_matrices & CBlast4_reply_body_Base::SetGet_matrices ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 236 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_matrices, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_matrices().

◆ SetGet_matrices() [3/3]

void CBlast4_request_body_Base::SetGet_matrices ( void  )
inline

◆ SetGet_parameters() [1/3]

void CBlast4_reply_body_Base::SetGet_parameters ( CBlast4_reply_body_Base::TGet_parameters value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 264 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_parameters, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_parameters() [2/3]

CBlast4_reply_body_Base::TGet_parameters & CBlast4_reply_body_Base::SetGet_parameters ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 258 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_parameters, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_parameters().

◆ SetGet_parameters() [3/3]

void CBlast4_request_body_Base::SetGet_parameters ( void  )
inline

◆ SetGet_paramsets() [1/3]

void CBlast4_reply_body_Base::SetGet_paramsets ( CBlast4_reply_body_Base::TGet_paramsets value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 286 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_paramsets, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_paramsets() [2/3]

CBlast4_reply_body_Base::TGet_paramsets & CBlast4_reply_body_Base::SetGet_paramsets ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 280 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_paramsets, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_paramsets().

◆ SetGet_paramsets() [3/3]

void CBlast4_request_body_Base::SetGet_paramsets ( void  )
inline

◆ SetGet_programs() [1/3]

void CBlast4_reply_body_Base::SetGet_programs ( CBlast4_reply_body_Base::TGet_programs value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 308 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_programs, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_programs() [2/3]

CBlast4_reply_body_Base::TGet_programs & CBlast4_reply_body_Base::SetGet_programs ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 302 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_programs, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_programs().

◆ SetGet_programs() [3/3]

void CBlast4_request_body_Base::SetGet_programs ( void  )
inline

◆ SetGet_protocol_info() [1/4]

void CBlast4_reply_body_Base::SetGet_protocol_info ( CBlast4_reply_body_Base::TGet_protocol_info value)

◆ SetGet_protocol_info() [2/4]

void CBlast4_request_body_Base::SetGet_protocol_info ( CBlast4_request_body_Base::TGet_protocol_info value)

◆ SetGet_protocol_info() [3/4]

CBlast4_reply_body_Base::TGet_protocol_info & CBlast4_reply_body_Base::SetGet_protocol_info ( void  )

◆ SetGet_protocol_info() [4/4]

CBlast4_request_body_Base::TGet_protocol_info & CBlast4_request_body_Base::SetGet_protocol_info ( void  )

◆ SetGet_queries() [1/2]

void CBlast4_reply_body_Base::SetGet_queries ( CBlast4_reply_body_Base::TGet_queries value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 396 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_queries, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_queries() [2/2]

CBlast4_reply_body_Base::TGet_queries & CBlast4_reply_body_Base::SetGet_queries ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 390 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_queries, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

◆ SetGet_request_info() [1/4]

void CBlast4_reply_body_Base::SetGet_request_info ( CBlast4_reply_body_Base::TGet_request_info value)

◆ SetGet_request_info() [2/4]

void CBlast4_request_body_Base::SetGet_request_info ( CBlast4_request_body_Base::TGet_request_info value)

◆ SetGet_request_info() [3/4]

CBlast4_reply_body_Base::TGet_request_info & CBlast4_reply_body_Base::SetGet_request_info ( void  )

◆ SetGet_request_info() [4/4]

CBlast4_request_body_Base::TGet_request_info & CBlast4_request_body_Base::SetGet_request_info ( void  )

◆ SetGet_search_info() [1/4]

void CBlast4_reply_body_Base::SetGet_search_info ( CBlast4_reply_body_Base::TGet_search_info value)

◆ SetGet_search_info() [2/4]

void CBlast4_request_body_Base::SetGet_search_info ( CBlast4_request_body_Base::TGet_search_info value)

◆ SetGet_search_info() [3/4]

CBlast4_reply_body_Base::TGet_search_info & CBlast4_reply_body_Base::SetGet_search_info ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 500 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_search_info, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_search_info().

◆ SetGet_search_info() [4/4]

CBlast4_request_body_Base::TGet_search_info & CBlast4_request_body_Base::SetGet_search_info ( void  )

◆ SetGet_search_results() [1/4]

void CBlast4_reply_body_Base::SetGet_search_results ( CBlast4_reply_body_Base::TGet_search_results value)

◆ SetGet_search_results() [2/4]

void CBlast4_request_body_Base::SetGet_search_results ( CBlast4_request_body_Base::TGet_search_results value)

◆ SetGet_search_results() [3/4]

CBlast4_reply_body_Base::TGet_search_results & CBlast4_reply_body_Base::SetGet_search_results ( void  )

◆ SetGet_search_results() [4/4]

CBlast4_request_body_Base::TGet_search_results & CBlast4_request_body_Base::SetGet_search_results ( void  )

◆ SetGet_sequence_parts() [1/4]

void CBlast4_reply_body_Base::SetGet_sequence_parts ( CBlast4_reply_body_Base::TGet_sequence_parts value)

◆ SetGet_sequence_parts() [2/4]

void CBlast4_request_body_Base::SetGet_sequence_parts ( CBlast4_request_body_Base::TGet_sequence_parts value)

◆ SetGet_sequence_parts() [3/4]

CBlast4_reply_body_Base::TGet_sequence_parts & CBlast4_reply_body_Base::SetGet_sequence_parts ( void  )

◆ SetGet_sequence_parts() [4/4]

CBlast4_request_body_Base::TGet_sequence_parts & CBlast4_request_body_Base::SetGet_sequence_parts ( void  )

◆ SetGet_sequences() [1/4]

void CBlast4_reply_body_Base::SetGet_sequences ( CBlast4_reply_body_Base::TGet_sequences value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 352 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Get_sequences, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetGet_sequences() [2/4]

void CBlast4_request_body_Base::SetGet_sequences ( CBlast4_request_body_Base::TGet_sequences value)

◆ SetGet_sequences() [3/4]

CBlast4_reply_body_Base::TGet_sequences & CBlast4_reply_body_Base::SetGet_sequences ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 346 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Get_sequences, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskGet_sequences().

◆ SetGet_sequences() [4/4]

CBlast4_request_body_Base::TGet_sequences & CBlast4_request_body_Base::SetGet_sequences ( void  )

◆ SetGet_windowmasked_taxids() [1/3]

void CBlast4_reply_body_Base::SetGet_windowmasked_taxids ( CBlast4_reply_body_Base::TGet_windowmasked_taxids value)

◆ SetGet_windowmasked_taxids() [2/3]

CBlast4_reply_body_Base::TGet_windowmasked_taxids & CBlast4_reply_body_Base::SetGet_windowmasked_taxids ( void  )

◆ SetGet_windowmasked_taxids() [3/3]

void CBlast4_request_body_Base::SetGet_windowmasked_taxids ( void  )
inline

◆ SetH() [1/2]

void CBlast4_ka_block_Base::SetH ( CBlast4_ka_block_Base::TH  value)
inline

Assign a value to H data member.

Parameters
valueValue to assign

Definition at line 396 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_H, CBlast4_ka_block_Base::m_set_State, and value.

◆ SetH() [2/2]

CBlast4_ka_block_Base::TH & CBlast4_ka_block_Base::SetH ( void  )
inline

Assign a value to H data member.

Returns
Reference to the data value.

Definition at line 403 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetH(), CBlast4_ka_block_Base::m_H, CBlast4_ka_block_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetId() [1/2]

void CBlast4_seq_part_data_Base::SetId ( CBlast4_seq_part_data_Base::TId value)

Assign a value to Id data member.

Parameters
valueReference to value.

Definition at line 61 of file Blast4_seq_part_data_.cpp.

References CBlast4_seq_part_data_Base::m_Id, and value.

◆ SetId() [2/2]

CBlast4_seq_part_data_Base::TId & CBlast4_seq_part_data_Base::SetId ( void  )
inline

Assign a value to Id data member.

Returns
Reference to the data value.

Definition at line 224 of file Blast4_seq_part_data_.hpp.

References CBlast4_seq_part_data_Base::m_Id, and CBlast4_seq_part_data_Base::ResetId().

◆ SetIdent() [1/3]

void CBlast4_request_Base::SetIdent ( const TIdent value)
inline

◆ SetIdent() [2/3]

void CBlast4_request_Base::SetIdent ( CBlast4_request_Base::TIdent &&  value)
inline

◆ SetIdent() [3/3]

CBlast4_request_Base::TIdent & CBlast4_request_Base::SetIdent ( void  )
inline

Assign a value to Ident data member.

Returns
Reference to the data value.

Definition at line 280 of file Blast4_request_.hpp.

References CBlast4_request_Base::IsSetIdent(), CBlast4_request_Base::m_Ident, CBlast4_request_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetInfo() [1/4]

void CBlast4_get_search_info_reply_Base::SetInfo ( CBlast4_get_search_info_reply_Base::TInfo value)

Assign a value to Info data member.

Parameters
valueReference to value.

Definition at line 62 of file Blast_get_searc_info_reply_.cpp.

References CBlast4_get_search_info_reply_Base::m_Info, CRef< C, Locker >::Reset(), and value.

◆ SetInfo() [2/4]

void CBlast4_get_search_info_request_Base::SetInfo ( CBlast4_get_search_info_request_Base::TInfo value)

Assign a value to Info data member.

Parameters
valueReference to value.

Definition at line 62 of file Blast_get_searc_info_reque_.cpp.

References CBlast4_get_search_info_request_Base::m_Info, CRef< C, Locker >::Reset(), and value.

◆ SetInfo() [3/4]

CBlast4_get_search_info_reply_Base::TInfo & CBlast4_get_search_info_reply_Base::SetInfo ( void  )

Assign a value to Info data member.

Returns
Reference to the data value.

Definition at line 67 of file Blast_get_searc_info_reply_.cpp.

References CBlast4_get_search_info_reply_Base::m_Info, and CRef< C, Locker >::Reset().

◆ SetInfo() [4/4]

CBlast4_get_search_info_request_Base::TInfo & CBlast4_get_search_info_request_Base::SetInfo ( void  )

Assign a value to Info data member.

Returns
Reference to the data value.

Definition at line 67 of file Blast_get_searc_info_reque_.cpp.

References CBlast4_get_search_info_request_Base::m_Info, and CRef< C, Locker >::Reset().

◆ SetInteger() [1/2]

void CBlast4_value_Base::SetInteger ( CBlast4_value_Base::TInteger  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 1022 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Integer, eDoNotResetVariant, CBlast4_value_Base::m_Integer, CBlast4_value_Base::Select(), and value.

◆ SetInteger() [2/2]

CBlast4_value_Base::TInteger & CBlast4_value_Base::SetInteger ( void  )
inline

◆ SetInteger_list()

CBlast4_value_Base::TInteger_list & CBlast4_value_Base::SetInteger_list ( void  )
inline

◆ SetK() [1/2]

void CBlast4_ka_block_Base::SetK ( CBlast4_ka_block_Base::TK  value)
inline

Assign a value to K data member.

Parameters
valueValue to assign

Definition at line 349 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_K, CBlast4_ka_block_Base::m_set_State, and value.

◆ SetK() [2/2]

CBlast4_ka_block_Base::TK & CBlast4_ka_block_Base::SetK ( void  )
inline

Assign a value to K data member.

Returns
Reference to the data value.

Definition at line 356 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetK(), CBlast4_ka_block_Base::m_K, CBlast4_ka_block_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetKa_blocks()

CBlast4_get_search_results_reply_Base::TKa_blocks & CBlast4_get_search_results_reply_Base::SetKa_blocks ( void  )
inline

Assign a value to Ka_blocks data member.

Returns
Reference to the data value.

Definition at line 477 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Ka_blocks, and CBlast4_get_search_results_reply_Base::m_set_State.

◆ SetLambda() [1/2]

void CBlast4_ka_block_Base::SetLambda ( CBlast4_ka_block_Base::TLambda  value)
inline

Assign a value to Lambda data member.

Parameters
valueValue to assign

Definition at line 302 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::m_Lambda, CBlast4_ka_block_Base::m_set_State, and value.

◆ SetLambda() [2/2]

CBlast4_ka_block_Base::TLambda & CBlast4_ka_block_Base::SetLambda ( void  )
inline

Assign a value to Lambda data member.

Returns
Reference to the data value.

Definition at line 309 of file Blast4_ka_block_.hpp.

References CBlast4_ka_block_Base::IsSetLambda(), CBlast4_ka_block_Base::m_Lambda, CBlast4_ka_block_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetLast_updated() [1/3]

void CBlast4_database_info_Base::SetLast_updated ( const TLast_updated value)
inline

Assign a value to Last_updated data member.

Parameters
valueValue to assign

Definition at line 544 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Last_updated, CBlast4_database_info_Base::m_set_State, and value.

◆ SetLast_updated() [2/3]

void CBlast4_database_info_Base::SetLast_updated ( CBlast4_database_info_Base::TLast_updated &&  value)
inline

◆ SetLast_updated() [3/3]

CBlast4_database_info_Base::TLast_updated & CBlast4_database_info_Base::SetLast_updated ( void  )
inline

Assign a value to Last_updated data member.

Returns
Reference to the data value.

Definition at line 558 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetLast_updated(), CBlast4_database_info_Base::m_Last_updated, CBlast4_database_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetLocations()

CBlast4_mask_Base::TLocations & CBlast4_mask_Base::SetLocations ( void  )
inline

Assign a value to Locations data member.

Returns
Reference to the data value.

Definition at line 229 of file Blast4_mask_.hpp.

References CBlast4_mask_Base::m_Locations, and CBlast4_mask_Base::m_set_State.

◆ SetMasks()

CBlast4_get_search_results_reply_Base::TMasks & CBlast4_get_search_results_reply_Base::SetMasks ( void  )
inline

Assign a value to Masks data member.

Returns
Reference to the data value.

Definition at line 452 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Masks, and CBlast4_get_search_results_reply_Base::m_set_State.

◆ SetMatrix() [1/2]

void CBlast4_value_Base::SetMatrix ( CBlast4_value_Base::TMatrix value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 311 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Matrix, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetMatrix() [2/2]

CBlast4_value_Base::TMatrix & CBlast4_value_Base::SetMatrix ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 305 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Matrix, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetMatrix_list()

CBlast4_value_Base::TMatrix_list & CBlast4_value_Base::SetMatrix_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1240 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Matrix_list, eDoNotResetVariant, CBlast4_value_Base::m_Matrix_list, and CBlast4_value_Base::Select().

◆ SetMessage() [1/3]

void CBlast4_error_Base::SetMessage ( const TMessage value)
inline

Assign a value to Message data member.

Parameters
valueValue to assign

Definition at line 308 of file Blast4_error_.hpp.

References CBlast4_error_Base::m_Message, CBlast4_error_Base::m_set_State, and value.

◆ SetMessage() [2/3]

void CBlast4_error_Base::SetMessage ( CBlast4_error_Base::TMessage &&  value)
inline

◆ SetMessage() [3/3]

CBlast4_error_Base::TMessage & CBlast4_error_Base::SetMessage ( void  )
inline

Assign a value to Message data member.

Returns
Reference to the data value.

Definition at line 322 of file Blast4_error_.hpp.

References CBlast4_error_Base::IsSetMessage(), CBlast4_error_Base::m_Message, CBlast4_error_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetMessages()

CBlast4_archive_Base::TMessages & CBlast4_archive_Base::SetMessages ( void  )
inline

Assign a value to Messages data member.

Returns
Reference to the data value.

Definition at line 320 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Messages, and CBlast4_archive_Base::m_set_State.

Referenced by PrintErrorArchive().

◆ SetName() [1/15]

void CBlast4_database_Base::SetName ( const TName value)
inline

Assign a value to Name data member.

Parameters
valueValue to assign

Definition at line 221 of file Blast4_database_.hpp.

References CBlast4_database_Base::m_Name, CBlast4_database_Base::m_set_State, and value.

Referenced by BOOST_AUTO_TEST_CASE(), CBlastServices::GetDatabaseInfoLegacy(), s_BuildGetSeqPartsRequest(), and s_BuildGetSeqRequest().

◆ SetName() [2/15]

void CBlast4_matrix_id_Base::SetName ( const TName value)
inline

Assign a value to Name data member.

Parameters
valueValue to assign

Definition at line 268 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::m_Name, CBlast4_matrix_id_Base::m_set_State, and value.

◆ SetName() [3/15]

void CBlast4_parameter_Base::SetName ( const TName value)
inline

Assign a value to Name data member.

Parameters
valueValue to assign

Definition at line 224 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::m_Name, CBlast4_parameter_Base::m_set_State, and value.

◆ SetName() [4/15]

void CBlast4_parameter_info_Base::SetName ( const TName value)
inline

Assign a value to Name data member.

Parameters
valueValue to assign

Definition at line 221 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::m_Name, CBlast4_parameter_info_Base::m_set_State, and value.

◆ SetName() [5/15]

void CBlast4_task_info_Base::SetName ( const TName value)
inline

Assign a value to Name data member.

Parameters
valueValue to assign

Definition at line 224 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::m_Name, CBlast4_task_info_Base::m_set_State, and value.

◆ SetName() [6/15]

void CBlast4_database_Base::SetName ( CBlast4_database_Base::TName &&  value)
inline

◆ SetName() [7/15]

void CBlast4_matrix_id_Base::SetName ( CBlast4_matrix_id_Base::TName &&  value)
inline

◆ SetName() [8/15]

void CBlast4_parameter_Base::SetName ( CBlast4_parameter_Base::TName &&  value)
inline

◆ SetName() [9/15]

void CBlast4_parameter_info_Base::SetName ( CBlast4_parameter_info_Base::TName &&  value)
inline

◆ SetName() [10/15]

void CBlast4_task_info_Base::SetName ( CBlast4_task_info_Base::TName &&  value)
inline

◆ SetName() [11/15]

CBlast4_database_Base::TName & CBlast4_database_Base::SetName ( void  )
inline

Assign a value to Name data member.

Returns
Reference to the data value.

Definition at line 235 of file Blast4_database_.hpp.

References CBlast4_database_Base::IsSetName(), CBlast4_database_Base::m_Name, CBlast4_database_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetName() [12/15]

CBlast4_matrix_id_Base::TName & CBlast4_matrix_id_Base::SetName ( void  )
inline

Assign a value to Name data member.

Returns
Reference to the data value.

Definition at line 282 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::IsSetName(), CBlast4_matrix_id_Base::m_Name, CBlast4_matrix_id_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetName() [13/15]

CBlast4_parameter_Base::TName & CBlast4_parameter_Base::SetName ( void  )
inline

Assign a value to Name data member.

Returns
Reference to the data value.

Definition at line 238 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::IsSetName(), CBlast4_parameter_Base::m_Name, CBlast4_parameter_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetName() [14/15]

CBlast4_parameter_info_Base::TName & CBlast4_parameter_info_Base::SetName ( void  )
inline

Assign a value to Name data member.

Returns
Reference to the data value.

Definition at line 235 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::IsSetName(), CBlast4_parameter_info_Base::m_Name, CBlast4_parameter_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetName() [15/15]

CBlast4_task_info_Base::TName & CBlast4_task_info_Base::SetName ( void  )
inline

Assign a value to Name data member.

Returns
Reference to the data value.

Definition at line 238 of file Blast4_task_info_.hpp.

References CBlast4_task_info_Base::IsSetName(), CBlast4_task_info_Base::m_Name, CBlast4_task_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetNum_alignments() [1/2]

void CBlast4_phi_alignments_Base::SetNum_alignments ( CBlast4_phi_alignments_Base::TNum_alignments  value)
inline

Assign a value to Num_alignments data member.

Parameters
valueValue to assign

Definition at line 224 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_Num_alignments, CBlast4_phi_alignments_Base::m_set_State, and value.

◆ SetNum_alignments() [2/2]

CBlast4_phi_alignments_Base::TNum_alignments & CBlast4_phi_alignments_Base::SetNum_alignments ( void  )
inline

Assign a value to Num_alignments data member.

Returns
Reference to the data value.

Definition at line 231 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::IsSetNum_alignments(), CBlast4_phi_alignments_Base::m_Num_alignments, CBlast4_phi_alignments_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetNum_identities() [1/2]

void CBlast4_simple_alignment_Base::SetNum_identities ( CBlast4_simple_alignment_Base::TNum_identities  value)
inline

Assign a value to Num_identities data member.

Parameters
valueValue to assign

Definition at line 581 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Num_identities, CBlast4_simple_alignment_Base::m_set_State, and value.

◆ SetNum_identities() [2/2]

CBlast4_simple_alignment_Base::TNum_identities & CBlast4_simple_alignment_Base::SetNum_identities ( void  )
inline

Assign a value to Num_identities data member.

Returns
Reference to the data value.

Definition at line 588 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetNum_identities(), CBlast4_simple_alignment_Base::m_Num_identities, CBlast4_simple_alignment_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetNum_indels() [1/2]

void CBlast4_simple_alignment_Base::SetNum_indels ( CBlast4_simple_alignment_Base::TNum_indels  value)
inline

Assign a value to Num_indels data member.

Parameters
valueValue to assign

Definition at line 628 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_Num_indels, CBlast4_simple_alignment_Base::m_set_State, and value.

◆ SetNum_indels() [2/2]

CBlast4_simple_alignment_Base::TNum_indels & CBlast4_simple_alignment_Base::SetNum_indels ( void  )
inline

Assign a value to Num_indels data member.

Returns
Reference to the data value.

Definition at line 635 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetNum_indels(), CBlast4_simple_alignment_Base::m_Num_indels, CBlast4_simple_alignment_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetNum_sequences() [1/2]

void CBlast4_database_info_Base::SetNum_sequences ( CBlast4_database_info_Base::TNum_sequences  value)
inline

Assign a value to Num_sequences data member.

Parameters
valueValue to assign

Definition at line 645 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Num_sequences, CBlast4_database_info_Base::m_set_State, and value.

◆ SetNum_sequences() [2/2]

CBlast4_database_info_Base::TNum_sequences & CBlast4_database_info_Base::SetNum_sequences ( void  )
inline

Assign a value to Num_sequences data member.

Returns
Reference to the data value.

Definition at line 652 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetNum_sequences(), CBlast4_database_info_Base::m_Num_sequences, CBlast4_database_info_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetParams() [1/4]

void CBlast4_finish_params_request_Base::SetParams ( CBlast4_finish_params_request_Base::TParams value)

Assign a value to Params data member.

Parameters
valueReference to value.

Definition at line 74 of file Blast_finish_params_reques_.cpp.

References CBlast4_finish_params_request_Base::m_Params, and value.

◆ SetParams() [2/4]

void CBlast4_get_databases_ex_request_Base::SetParams ( CBlast4_get_databases_ex_request_Base::TParams value)

Assign a value to Params data member.

Parameters
valueReference to value.

Definition at line 56 of file Blast_get_databa_ex_reques_.cpp.

References CBlast4_get_databases_ex_request_Base::m_Params, and value.

◆ SetParams() [3/4]

CBlast4_finish_params_request_Base::TParams & CBlast4_finish_params_request_Base::SetParams ( void  )

Assign a value to Params data member.

Returns
Reference to the data value.

Definition at line 79 of file Blast_finish_params_reques_.cpp.

References CBlast4_finish_params_request_Base::m_Params.

◆ SetParams() [4/4]

CBlast4_get_databases_ex_request_Base::TParams & CBlast4_get_databases_ex_request_Base::SetParams ( void  )

Assign a value to Params data member.

Returns
Reference to the data value.

Definition at line 61 of file Blast_get_databa_ex_reques_.cpp.

References CBlast4_get_databases_ex_request_Base::m_Params.

◆ SetParamset() [1/6]

void CBlast4_queue_search_request_Base::SetParamset ( const TParamset value)
inline

Assign a value to Paramset data member.

Parameters
valueValue to assign

Definition at line 634 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Paramset, CBlast4_queue_search_request_Base::m_set_State, and value.

◆ SetParamset() [2/6]

void CBlast4_finish_params_request_Base::SetParamset ( const TParamset value)
inline

Assign a value to Paramset data member.

Parameters
valueValue to assign

Definition at line 401 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_Paramset, CBlast4_finish_params_request_Base::m_set_State, and value.

◆ SetParamset() [3/6]

void CBlast4_queue_search_request_Base::SetParamset ( CBlast4_queue_search_request_Base::TParamset &&  value)
inline

◆ SetParamset() [4/6]

void CBlast4_finish_params_request_Base::SetParamset ( CBlast4_finish_params_request_Base::TParamset &&  value)
inline

◆ SetParamset() [5/6]

CBlast4_queue_search_request_Base::TParamset & CBlast4_queue_search_request_Base::SetParamset ( void  )
inline

◆ SetParamset() [6/6]

CBlast4_finish_params_request_Base::TParamset & CBlast4_finish_params_request_Base::SetParamset ( void  )
inline

◆ SetPhi_alignments() [1/2]

void CBlast4_get_search_results_reply_Base::SetPhi_alignments ( CBlast4_get_search_results_reply_Base::TPhi_alignments value)

Assign a value to Phi_alignments data member.

Parameters
valueReference to value.

Definition at line 78 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Phi_alignments, and value.

◆ SetPhi_alignments() [2/2]

CBlast4_get_search_results_reply_Base::TPhi_alignments & CBlast4_get_search_results_reply_Base::SetPhi_alignments ( void  )

Assign a value to Phi_alignments data member.

Returns
Reference to the data value.

Definition at line 83 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Phi_alignments.

◆ SetProgram() [1/12]

void CBlast4_program_info_Base::SetProgram ( const TProgram value)
inline

Assign a value to Program data member.

Parameters
valueValue to assign

Definition at line 215 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::m_Program, CBlast4_program_info_Base::m_set_State, and value.

◆ SetProgram() [2/12]

void CBlast4_queue_search_request_Base::SetProgram ( const TProgram value)
inline

Assign a value to Program data member.

Parameters
valueValue to assign

Definition at line 480 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Program, CBlast4_queue_search_request_Base::m_set_State, and value.

Referenced by CExportStrategy::x_Process_BlastOptions().

◆ SetProgram() [3/12]

void CBlast4_finish_params_request_Base::SetProgram ( const TProgram value)
inline

Assign a value to Program data member.

Parameters
valueValue to assign

Definition at line 307 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_Program, CBlast4_finish_params_request_Base::m_set_State, and value.

◆ SetProgram() [4/12]

void CBlast4_get_request_info_reply_Base::SetProgram ( const TProgram value)
inline

Assign a value to Program data member.

Parameters
valueValue to assign

Definition at line 539 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Program, CBlast4_get_request_info_reply_Base::m_set_State, and value.

◆ SetProgram() [5/12]

void CBlast4_program_info_Base::SetProgram ( CBlast4_program_info_Base::TProgram &&  value)
inline

◆ SetProgram() [6/12]

void CBlast4_queue_search_request_Base::SetProgram ( CBlast4_queue_search_request_Base::TProgram &&  value)
inline

◆ SetProgram() [7/12]

void CBlast4_finish_params_request_Base::SetProgram ( CBlast4_finish_params_request_Base::TProgram &&  value)
inline

◆ SetProgram() [8/12]

void CBlast4_get_request_info_reply_Base::SetProgram ( CBlast4_get_request_info_reply_Base::TProgram &&  value)
inline

◆ SetProgram() [9/12]

CBlast4_program_info_Base::TProgram & CBlast4_program_info_Base::SetProgram ( void  )
inline

Assign a value to Program data member.

Returns
Reference to the data value.

Definition at line 229 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::IsSetProgram(), CBlast4_program_info_Base::m_Program, CBlast4_program_info_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetProgram() [10/12]

CBlast4_queue_search_request_Base::TProgram & CBlast4_queue_search_request_Base::SetProgram ( void  )
inline

◆ SetProgram() [11/12]

CBlast4_finish_params_request_Base::TProgram & CBlast4_finish_params_request_Base::SetProgram ( void  )
inline

◆ SetProgram() [12/12]

CBlast4_get_request_info_reply_Base::TProgram & CBlast4_get_request_info_reply_Base::SetProgram ( void  )
inline

◆ SetProgram_options() [1/4]

void CBlast4_queue_search_request_Base::SetProgram_options ( CBlast4_queue_search_request_Base::TProgram_options value)

◆ SetProgram_options() [2/4]

void CBlast4_get_request_info_reply_Base::SetProgram_options ( CBlast4_get_request_info_reply_Base::TProgram_options value)

Assign a value to Program_options data member.

Parameters
valueReference to value.

Definition at line 123 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Program_options, and value.

◆ SetProgram_options() [3/4]

CBlast4_queue_search_request_Base::TProgram_options & CBlast4_queue_search_request_Base::SetProgram_options ( void  )

Assign a value to Program_options data member.

Returns
Reference to the data value.

Definition at line 126 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Program_options.

◆ SetProgram_options() [4/4]

CBlast4_get_request_info_reply_Base::TProgram_options & CBlast4_get_request_info_reply_Base::SetProgram_options ( void  )
inline

Assign a value to Program_options data member.

Returns
Reference to the data value.

Definition at line 740 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Program_options, and CBlast4_get_request_info_reply_Base::ResetProgram_options().

◆ SetPssm() [1/4]

void CBlast4_get_search_results_reply_Base::SetPssm ( CBlast4_get_search_results_reply_Base::TPssm value)

Assign a value to Pssm data member.

Parameters
valueReference to value.

Definition at line 113 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Pssm, and value.

◆ SetPssm() [2/4]

void CBlast4_queries_Base::SetPssm ( CBlast4_queries_Base::TPssm value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 122 of file Blast4_queries_.cpp.

References CObject::AddReference(), CBlast4_queries_Base::e_Pssm, CBlast4_queries_Base::m_choice, CBlast4_queries_Base::m_object, CBlast4_queries_Base::ResetSelection(), and value.

◆ SetPssm() [3/4]

CBlast4_get_search_results_reply_Base::TPssm & CBlast4_get_search_results_reply_Base::SetPssm ( void  )

Assign a value to Pssm data member.

Returns
Reference to the data value.

Definition at line 118 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Pssm.

◆ SetPssm() [4/4]

CBlast4_queries_Base::TPssm & CBlast4_queries_Base::SetPssm ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 116 of file Blast4_queries_.cpp.

References CBlast4_queries_Base::e_Pssm, eDoNotResetVariant, CBlast4_queries_Base::m_object, and CBlast4_queries_Base::Select().

Referenced by CRemoteBlast::SetQueries(), and CExportStrategy::x_Process_Pssm().

◆ SetQueries() [1/6]

void CBlast4_get_queries_reply_Base::SetQueries ( CBlast4_get_queries_reply_Base::TQueries value)

Assign a value to Queries data member.

Parameters
valueReference to value.

Definition at line 60 of file Blast4_get_queries_reply_.cpp.

References CBlast4_get_queries_reply_Base::m_Queries, and value.

◆ SetQueries() [2/6]

void CBlast4_queue_search_request_Base::SetQueries ( CBlast4_queue_search_request_Base::TQueries value)

Assign a value to Queries data member.

Parameters
valueReference to value.

Definition at line 74 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Queries, and value.

Referenced by CImportStrategy::GetQueries(), CExportStrategy::x_Process_Pssm(), and CExportStrategy::x_Process_Query().

◆ SetQueries() [3/6]

void CBlast4_get_request_info_reply_Base::SetQueries ( CBlast4_get_request_info_reply_Base::TQueries value)

Assign a value to Queries data member.

Parameters
valueReference to value.

Definition at line 95 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Queries, and value.

◆ SetQueries() [4/6]

CBlast4_get_queries_reply_Base::TQueries & CBlast4_get_queries_reply_Base::SetQueries ( void  )
inline

Assign a value to Queries data member.

Returns
Reference to the data value.

Definition at line 179 of file Blast4_get_queries_reply_.hpp.

References CBlast4_get_queries_reply_Base::m_Queries, and CBlast4_get_queries_reply_Base::ResetQueries().

◆ SetQueries() [5/6]

CBlast4_queue_search_request_Base::TQueries & CBlast4_queue_search_request_Base::SetQueries ( void  )
inline

Assign a value to Queries data member.

Returns
Reference to the data value.

Definition at line 574 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Queries, and CBlast4_queue_search_request_Base::ResetQueries().

◆ SetQueries() [6/6]

CBlast4_get_request_info_reply_Base::TQueries & CBlast4_get_request_info_reply_Base::SetQueries ( void  )
inline

Assign a value to Queries data member.

Returns
Reference to the data value.

Definition at line 680 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Queries, and CBlast4_get_request_info_reply_Base::ResetQueries().

◆ SetQuery_id() [1/3]

void CBlast4_alignments_for_query_Base::SetQuery_id ( const TQuery_id value)
inline

Assign a value to Query_id data member.

Parameters
valueValue to assign

Definition at line 223 of file Blast4_alignment_for_query_.hpp.

References CBlast4_alignments_for_query_Base::m_Query_id, CBlast4_alignments_for_query_Base::m_set_State, and value.

◆ SetQuery_id() [2/3]

void CBlast4_alignments_for_query_Base::SetQuery_id ( CBlast4_alignments_for_query_Base::TQuery_id &&  value)
inline

◆ SetQuery_id() [3/3]

CBlast4_alignments_for_query_Base::TQuery_id & CBlast4_alignments_for_query_Base::SetQuery_id ( void  )
inline

◆ SetQuery_mask() [1/2]

void CBlast4_value_Base::SetQuery_mask ( CBlast4_value_Base::TQuery_mask value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 449 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Query_mask, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetQuery_mask() [2/2]

CBlast4_value_Base::TQuery_mask & CBlast4_value_Base::SetQuery_mask ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 443 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Query_mask, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

Referenced by CExportStrategy::x_Process_Query(), and CRemoteBlast::x_SetOneParam().

◆ SetQueue_search() [1/4]

void CBlast4_reply_body_Base::SetQueue_search ( CBlast4_reply_body_Base::TQueue_search value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 374 of file Blast4_reply_body_.cpp.

References CObject::AddReference(), CBlast4_reply_body_Base::e_Queue_search, CBlast4_reply_body_Base::m_choice, CBlast4_reply_body_Base::m_object, CBlast4_reply_body_Base::ResetSelection(), and value.

◆ SetQueue_search() [2/4]

void CBlast4_request_body_Base::SetQueue_search ( CBlast4_request_body_Base::TQueue_search value)

◆ SetQueue_search() [3/4]

CBlast4_reply_body_Base::TQueue_search & CBlast4_reply_body_Base::SetQueue_search ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 368 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::e_Queue_search, eDoNotResetVariant, CBlast4_reply_body_Base::m_object, and CBlast4_reply_body_Base::Select().

Referenced by CBlast4Client_Base::AskQueue_search().

◆ SetQueue_search() [4/4]

CBlast4_request_body_Base::TQueue_search & CBlast4_request_body_Base::SetQueue_search ( void  )

◆ SetRaw_score() [1/2]

void CBlast4_cutoff_Base::SetRaw_score ( CBlast4_cutoff_Base::TRaw_score  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 343 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_Raw_score, eDoNotResetVariant, CBlast4_cutoff_Base::m_Raw_score, CBlast4_cutoff_Base::Select(), and value.

◆ SetRaw_score() [2/2]

CBlast4_cutoff_Base::TRaw_score & CBlast4_cutoff_Base::SetRaw_score ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 336 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::e_Raw_score, eDoNotResetVariant, CBlast4_cutoff_Base::m_Raw_score, and CBlast4_cutoff_Base::Select().

◆ SetReal() [1/2]

void CBlast4_value_Base::SetReal ( CBlast4_value_Base::TReal  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 1055 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Real, eDoNotResetVariant, CBlast4_value_Base::m_Real, CBlast4_value_Base::Select(), and value.

◆ SetReal() [2/2]

CBlast4_value_Base::TReal & CBlast4_value_Base::SetReal ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1048 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Real, eDoNotResetVariant, CBlast4_value_Base::m_Real, and CBlast4_value_Base::Select().

Referenced by CBlast4_parameters::Add().

◆ SetReal_list()

CBlast4_value_Base::TReal_list & CBlast4_value_Base::SetReal_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1260 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Real_list, eDoNotResetVariant, CBlast4_value_Base::m_Real_list, and CBlast4_value_Base::Select().

◆ SetRequest() [1/2]

void CBlast4_archive_Base::SetRequest ( CBlast4_archive_Base::TRequest value)

Assign a value to Request data member.

Parameters
valueReference to value.

Definition at line 62 of file Blast4_archive_.cpp.

References CBlast4_archive_Base::m_Request, and value.

Referenced by PrintErrorArchive().

◆ SetRequest() [2/2]

CBlast4_archive_Base::TRequest & CBlast4_archive_Base::SetRequest ( void  )
inline

Assign a value to Request data member.

Returns
Reference to the data value.

Definition at line 263 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Request, and CBlast4_archive_Base::ResetRequest().

◆ SetRequest_id() [1/21]

void CBlast4_get_search_results_request_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 222 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::m_Request_id, CBlast4_get_search_results_request_Base::m_set_State, and value.

◆ SetRequest_id() [2/21]

void CBlast4_get_search_status_request_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 181 of file Blas_get_searc_statu_reque_.hpp.

References CBlast4_get_search_status_request_Base::m_Request_id, CBlast4_get_search_status_request_Base::m_set_State, and value.

◆ SetRequest_id() [3/21]

void CBlast4_get_search_strategy_request_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 181 of file Blas_get_searc_strat_reque_.hpp.

References CBlast4_get_search_strategy_request_Base::m_Request_id, CBlast4_get_search_strategy_request_Base::m_set_State, and value.

◆ SetRequest_id() [4/21]

void CBlast4_queue_search_reply_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 180 of file Blast4_queue_search_reply_.hpp.

References CBlast4_queue_search_reply_Base::m_Request_id, CBlast4_queue_search_reply_Base::m_set_State, and value.

◆ SetRequest_id() [5/21]

void CBlast4_get_request_info_request_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 181 of file Blast_get_reque_info_reque_.hpp.

References CBlast4_get_request_info_request_Base::m_Request_id, CBlast4_get_request_info_request_Base::m_set_State, and value.

Referenced by CRemoteBlast::x_GetRequestInfoFromRID().

◆ SetRequest_id() [6/21]

void CBlast4_get_search_info_reply_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 224 of file Blast_get_searc_info_reply_.hpp.

References CBlast4_get_search_info_reply_Base::m_Request_id, CBlast4_get_search_info_reply_Base::m_set_State, and value.

◆ SetRequest_id() [7/21]

void CBlast4_get_search_info_request_Base::SetRequest_id ( const TRequest_id value)
inline

Assign a value to Request_id data member.

Parameters
valueValue to assign

Definition at line 225 of file Blast_get_searc_info_reque_.hpp.

References CBlast4_get_search_info_request_Base::m_Request_id, CBlast4_get_search_info_request_Base::m_set_State, and value.

◆ SetRequest_id() [8/21]

void CBlast4_get_search_results_request_Base::SetRequest_id ( CBlast4_get_search_results_request_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [9/21]

void CBlast4_get_search_status_request_Base::SetRequest_id ( CBlast4_get_search_status_request_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [10/21]

void CBlast4_get_search_strategy_request_Base::SetRequest_id ( CBlast4_get_search_strategy_request_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [11/21]

void CBlast4_queue_search_reply_Base::SetRequest_id ( CBlast4_queue_search_reply_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [12/21]

void CBlast4_get_request_info_request_Base::SetRequest_id ( CBlast4_get_request_info_request_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [13/21]

void CBlast4_get_search_info_reply_Base::SetRequest_id ( CBlast4_get_search_info_reply_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [14/21]

void CBlast4_get_search_info_request_Base::SetRequest_id ( CBlast4_get_search_info_request_Base::TRequest_id &&  value)
inline

◆ SetRequest_id() [15/21]

CBlast4_get_search_results_request_Base::TRequest_id & CBlast4_get_search_results_request_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [16/21]

CBlast4_get_search_status_request_Base::TRequest_id & CBlast4_get_search_status_request_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [17/21]

CBlast4_get_search_strategy_request_Base::TRequest_id & CBlast4_get_search_strategy_request_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [18/21]

CBlast4_queue_search_reply_Base::TRequest_id & CBlast4_queue_search_reply_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [19/21]

CBlast4_get_request_info_request_Base::TRequest_id & CBlast4_get_request_info_request_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [20/21]

CBlast4_get_search_info_reply_Base::TRequest_id & CBlast4_get_search_info_reply_Base::SetRequest_id ( void  )
inline

◆ SetRequest_id() [21/21]

CBlast4_get_search_info_request_Base::TRequest_id & CBlast4_get_search_info_request_Base::SetRequest_id ( void  )
inline

◆ SetResidue_type() [1/2]

void CBlast4_matrix_id_Base::SetResidue_type ( CBlast4_matrix_id_Base::TResidue_type  value)
inline

Assign a value to Residue_type data member.

Parameters
valueValue to assign

Definition at line 228 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::m_Residue_type, CBlast4_matrix_id_Base::m_set_State, and value.

◆ SetResidue_type() [2/2]

CBlast4_matrix_id_Base::TResidue_type & CBlast4_matrix_id_Base::SetResidue_type ( void  )
inline

Assign a value to Residue_type data member.

Returns
Reference to the data value.

Definition at line 235 of file Blast4_matrix_id_.hpp.

References CBlast4_matrix_id_Base::IsSetResidue_type(), CBlast4_matrix_id_Base::m_Residue_type, CBlast4_matrix_id_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetResult_types() [1/2]

void CBlast4_get_search_results_request_Base::SetResult_types ( CBlast4_get_search_results_request_Base::TResult_types  value)
inline

Assign a value to Result_types data member.

Parameters
valueValue to assign

Definition at line 276 of file Blas_get_searc_resul_reque_.hpp.

References CBlast4_get_search_results_request_Base::m_Result_types, CBlast4_get_search_results_request_Base::m_set_State, and value.

◆ SetResult_types() [2/2]

CBlast4_get_search_results_request_Base::TResult_types & CBlast4_get_search_results_request_Base::SetResult_types ( void  )
inline

◆ SetResults() [1/2]

void CBlast4_archive_Base::SetResults ( CBlast4_archive_Base::TResults value)

Assign a value to Results data member.

Parameters
valueReference to value.

Definition at line 76 of file Blast4_archive_.cpp.

References CBlast4_archive_Base::m_Results, and value.

Referenced by PrintErrorArchive().

◆ SetResults() [2/2]

CBlast4_archive_Base::TResults & CBlast4_archive_Base::SetResults ( void  )
inline

Assign a value to Results data member.

Returns
Reference to the data value.

Definition at line 293 of file Blast4_archive_.hpp.

References CBlast4_archive_Base::m_Results, and CBlast4_archive_Base::ResetResults().

◆ SetSearch_stats()

CBlast4_get_search_results_reply_Base::TSearch_stats & CBlast4_get_search_results_reply_Base::SetSearch_stats ( void  )
inline

Assign a value to Search_stats data member.

Returns
Reference to the data value.

Definition at line 502 of file Blas_get_searc_resul_reply_.hpp.

References CBlast4_get_search_results_reply_Base::m_Search_stats, and CBlast4_get_search_results_reply_Base::m_set_State.

◆ SetSeq_align() [1/2]

void CBlast4_value_Base::SetSeq_align ( CBlast4_value_Base::TSeq_align value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 333 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Seq_align, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetSeq_align() [2/2]

CBlast4_value_Base::TSeq_align & CBlast4_value_Base::SetSeq_align ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 327 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Seq_align, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetSeq_align_list()

CBlast4_value_Base::TSeq_align_list & CBlast4_value_Base::SetSeq_align_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1280 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_align_list, eDoNotResetVariant, CBlast4_value_Base::m_Seq_align_list, and CBlast4_value_Base::Select().

◆ SetSeq_align_set() [1/2]

void CBlast4_value_Base::SetSeq_align_set ( CBlast4_value_Base::TSeq_align_set value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 427 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Seq_align_set, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetSeq_align_set() [2/2]

CBlast4_value_Base::TSeq_align_set & CBlast4_value_Base::SetSeq_align_set ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 421 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Seq_align_set, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetSeq_id() [1/2]

void CBlast4_value_Base::SetSeq_id ( CBlast4_value_Base::TSeq_id value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 355 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Seq_id, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetSeq_id() [2/2]

CBlast4_value_Base::TSeq_id & CBlast4_value_Base::SetSeq_id ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 349 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Seq_id, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetSeq_id_list()

CBlast4_value_Base::TSeq_id_list & CBlast4_value_Base::SetSeq_id_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1300 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_id_list, eDoNotResetVariant, CBlast4_value_Base::m_Seq_id_list, and CBlast4_value_Base::Select().

◆ SetSeq_ids()

CBlast4_get_sequences_request_Base::TSeq_ids & CBlast4_get_sequences_request_Base::SetSeq_ids ( void  )
inline

Assign a value to Seq_ids data member.

Returns
Reference to the data value.

Definition at line 336 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_Seq_ids, and CBlast4_get_sequences_request_Base::m_set_State.

Referenced by s_BuildGetSeqRequest().

◆ SetSeq_loc() [1/2]

void CBlast4_value_Base::SetSeq_loc ( CBlast4_value_Base::TSeq_loc value)

Select the variant and set its data.

Parameters
valueReference to the data.

Definition at line 377 of file Blast4_value_.cpp.

References CObject::AddReference(), CBlast4_value_Base::e_Seq_loc, CBlast4_value_Base::m_choice, CBlast4_value_Base::m_object, CBlast4_value_Base::ResetSelection(), and value.

◆ SetSeq_loc() [2/2]

CBlast4_value_Base::TSeq_loc & CBlast4_value_Base::SetSeq_loc ( void  )

Select the variant.

Returns
Reference to the variant data.

Definition at line 371 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_Seq_loc, eDoNotResetVariant, CBlast4_value_Base::m_object, and CBlast4_value_Base::Select().

◆ SetSeq_loc_list() [1/3]

CBlast4_queries_Base::TSeq_loc_list & CBlast4_queries_Base::SetSeq_loc_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 313 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::e_Seq_loc_list, eDoNotResetVariant, CBlast4_queries_Base::m_Seq_loc_list, and CBlast4_queries_Base::Select().

Referenced by BOOST_AUTO_TEST_CASE(), and CExportStrategy::x_Process_Query().

◆ SetSeq_loc_list() [2/3]

CBlast4_subject_Base::TSeq_loc_list & CBlast4_subject_Base::SetSeq_loc_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 339 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::e_Seq_loc_list, eDoNotResetVariant, CBlast4_subject_Base::m_Seq_loc_list, and CBlast4_subject_Base::Select().

◆ SetSeq_loc_list() [3/3]

CBlast4_value_Base::TSeq_loc_list & CBlast4_value_Base::SetSeq_loc_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1320 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Seq_loc_list, eDoNotResetVariant, CBlast4_value_Base::m_Seq_loc_list, and CBlast4_value_Base::Select().

◆ SetSeq_locations()

CBlast4_get_seq_parts_request_Base::TSeq_locations & CBlast4_get_seq_parts_request_Base::SetSeq_locations ( void  )
inline

Assign a value to Seq_locations data member.

Returns
Reference to the data value.

Definition at line 252 of file Blast_get_seq_parts_reques_.hpp.

References CBlast4_get_seq_parts_request_Base::m_Seq_locations, and CBlast4_get_seq_parts_request_Base::m_set_State.

Referenced by s_BuildGetSeqPartsRequest().

◆ SetSeq_locs()

CBlast4_phi_alignments_Base::TSeq_locs & CBlast4_phi_alignments_Base::SetSeq_locs ( void  )
inline

Assign a value to Seq_locs data member.

Returns
Reference to the data value.

Definition at line 261 of file Blast4_phi_alignments_.hpp.

References CBlast4_phi_alignments_Base::m_Seq_locs, and CBlast4_phi_alignments_Base::m_set_State.

◆ SetSeqtech() [1/2]

void CBlast4_database_info_Base::SetSeqtech ( CBlast4_database_info_Base::TSeqtech  value)
inline

Assign a value to Seqtech data member.

Parameters
valueValue to assign

Definition at line 692 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_Seqtech, CBlast4_database_info_Base::m_set_State, and value.

◆ SetSeqtech() [2/2]

CBlast4_database_info_Base::TSeqtech & CBlast4_database_info_Base::SetSeqtech ( void  )
inline

Assign a value to Seqtech data member.

Returns
Reference to the data value.

Definition at line 699 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetSeqtech(), CBlast4_database_info_Base::m_Seqtech, CBlast4_database_info_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetSequences()

CBlast4_subject_Base::TSequences & CBlast4_subject_Base::SetSequences ( void  )
inline

◆ SetService() [1/9]

void CBlast4_queue_search_request_Base::SetService ( const TService value)
inline

Assign a value to Service data member.

Parameters
valueValue to assign

Definition at line 527 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Service, CBlast4_queue_search_request_Base::m_set_State, and value.

Referenced by CExportStrategy::x_Process_BlastOptions(), and CExportStrategy::x_Process_Pssm().

◆ SetService() [2/9]

void CBlast4_finish_params_request_Base::SetService ( const TService value)
inline

Assign a value to Service data member.

Parameters
valueValue to assign

Definition at line 354 of file Blast_finish_params_reques_.hpp.

References CBlast4_finish_params_request_Base::m_Service, CBlast4_finish_params_request_Base::m_set_State, and value.

◆ SetService() [3/9]

void CBlast4_get_request_info_reply_Base::SetService ( const TService value)
inline

Assign a value to Service data member.

Parameters
valueValue to assign

Definition at line 586 of file Blast_get_reque_info_reply_.hpp.

References CBlast4_get_request_info_reply_Base::m_Service, CBlast4_get_request_info_reply_Base::m_set_State, and value.

◆ SetService() [4/9]

void CBlast4_queue_search_request_Base::SetService ( CBlast4_queue_search_request_Base::TService &&  value)
inline

◆ SetService() [5/9]

void CBlast4_finish_params_request_Base::SetService ( CBlast4_finish_params_request_Base::TService &&  value)
inline

◆ SetService() [6/9]

void CBlast4_get_request_info_reply_Base::SetService ( CBlast4_get_request_info_reply_Base::TService &&  value)
inline

◆ SetService() [7/9]

CBlast4_queue_search_request_Base::TService & CBlast4_queue_search_request_Base::SetService ( void  )
inline

◆ SetService() [8/9]

CBlast4_finish_params_request_Base::TService & CBlast4_finish_params_request_Base::SetService ( void  )
inline

◆ SetService() [9/9]

CBlast4_get_request_info_reply_Base::TService & CBlast4_get_request_info_reply_Base::SetService ( void  )
inline

◆ SetServices()

CBlast4_program_info_Base::TServices & CBlast4_program_info_Base::SetServices ( void  )
inline

Assign a value to Services data member.

Returns
Reference to the data value.

Definition at line 259 of file Blast4_program_info_.hpp.

References CBlast4_program_info_Base::m_Services, and CBlast4_program_info_Base::m_set_State.

◆ SetSimple_results() [1/2]

void CBlast4_get_search_results_reply_Base::SetSimple_results ( CBlast4_get_search_results_reply_Base::TSimple_results value)

Assign a value to Simple_results data member.

Parameters
valueReference to value.

Definition at line 130 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Simple_results, and value.

◆ SetSimple_results() [2/2]

CBlast4_get_search_results_reply_Base::TSimple_results & CBlast4_get_search_results_reply_Base::SetSimple_results ( void  )

Assign a value to Simple_results data member.

Returns
Reference to the data value.

Definition at line 135 of file Blas_get_searc_resul_reply_.cpp.

References CBlast4_get_search_results_reply_Base::m_Simple_results.

◆ SetSkip_seq_data() [1/2]

void CBlast4_get_sequences_request_Base::SetSkip_seq_data ( CBlast4_get_sequences_request_Base::TSkip_seq_data  value)
inline

Assign a value to Skip_seq_data data member.

Parameters
valueValue to assign

Definition at line 374 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_set_State, CBlast4_get_sequences_request_Base::m_Skip_seq_data, and value.

Referenced by s_BuildGetSeqRequest().

◆ SetSkip_seq_data() [2/2]

CBlast4_get_sequences_request_Base::TSkip_seq_data & CBlast4_get_sequences_request_Base::SetSkip_seq_data ( void  )
inline

◆ SetStart() [1/2]

void CBlast4_range_Base::SetStart ( CBlast4_range_Base::TStart  value)
inline

Assign a value to Start data member.

Parameters
valueValue to assign

Definition at line 265 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State, CBlast4_range_Base::m_Start, and value.

◆ SetStart() [2/2]

CBlast4_range_Base::TStart & CBlast4_range_Base::SetStart ( void  )
inline

Assign a value to Start data member.

Returns
Reference to the data value.

Definition at line 272 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetStart(), CBlast4_range_Base::m_set_State, CBlast4_range_Base::m_Start, and CSerialObject::UnassignedByte().

◆ SetStatus() [1/3]

void CBlast4_get_search_status_reply_Base::SetStatus ( const TStatus value)
inline

Assign a value to Status data member.

Parameters
valueValue to assign

Definition at line 181 of file Blas_get_searc_statu_reply_.hpp.

References CBlast4_get_search_status_reply_Base::m_set_State, CBlast4_get_search_status_reply_Base::m_Status, and value.

◆ SetStatus() [2/3]

void CBlast4_get_search_status_reply_Base::SetStatus ( CBlast4_get_search_status_reply_Base::TStatus &&  value)
inline

◆ SetStatus() [3/3]

CBlast4_get_search_status_reply_Base::TStatus & CBlast4_get_search_status_reply_Base::SetStatus ( void  )
inline

◆ SetStrand() [1/2]

void CBlast4_range_Base::SetStrand ( CBlast4_range_Base::TStrand  value)
inline

Assign a value to Strand data member.

Parameters
valueValue to assign

Definition at line 359 of file Blast4_range_.hpp.

References CBlast4_range_Base::m_set_State, CBlast4_range_Base::m_Strand, and value.

◆ SetStrand() [2/2]

CBlast4_range_Base::TStrand & CBlast4_range_Base::SetStrand ( void  )
inline

Assign a value to Strand data member.

Returns
Reference to the data value.

Definition at line 366 of file Blast4_range_.hpp.

References CBlast4_range_Base::IsSetStrand(), CBlast4_range_Base::m_set_State, CBlast4_range_Base::m_Strand, and CSerialObject::UnassignedByte().

◆ SetStrand_type() [1/2]

void CBlast4_value_Base::SetStrand_type ( CBlast4_value_Base::TStrand_type  value)
inline

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 1100 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Strand_type, eDoNotResetVariant, CBlast4_value_Base::m_Strand_type, CBlast4_value_Base::Select(), and value.

◆ SetStrand_type() [2/2]

CBlast4_value_Base::TStrand_type & CBlast4_value_Base::SetStrand_type ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1093 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Strand_type, eDoNotResetVariant, CBlast4_value_Base::m_Strand_type, and CBlast4_value_Base::Select().

Referenced by CBlast4_parameters::Add().

◆ SetStrand_type_list()

CBlast4_value_Base::TStrand_type_list & CBlast4_value_Base::SetStrand_type_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1340 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_Strand_type_list, eDoNotResetVariant, CBlast4_value_Base::m_Strand_type_list, and CBlast4_value_Base::Select().

◆ SetString() [1/2]

void CBlast4_value_Base::SetString ( const TString value)

Select the variant and set its data.

Parameters
valueVariant data.

Definition at line 387 of file Blast4_value_.cpp.

References CBlast4_value_Base::e_String, eDoNotResetVariant, CBlast4_value_Base::m_string, CBlast4_value_Base::Select(), and value.

◆ SetString() [2/2]

CBlast4_value_Base::TString & CBlast4_value_Base::SetString ( void  )
inline

◆ SetString_list()

CBlast4_value_Base::TString_list & CBlast4_value_Base::SetString_list ( void  )
inline

Select the variant.

Returns
Reference to the variant data.

Definition at line 1360 of file Blast4_value_.hpp.

References CBlast4_value_Base::e_String_list, eDoNotResetVariant, CBlast4_value_Base::m_String_list, and CBlast4_value_Base::Select().

◆ SetSubject() [1/2]

void CBlast4_queue_search_request_Base::SetSubject ( CBlast4_queue_search_request_Base::TSubject value)

Assign a value to Subject data member.

Parameters
valueReference to value.

Definition at line 88 of file Blast4_queue_search_reques_.cpp.

References CBlast4_queue_search_request_Base::m_Subject, and value.

Referenced by CImportStrategy::GetSubject(), CExportStrategy::x_Process_SearchDb(), and CExportStrategy::x_Process_Subject().

◆ SetSubject() [2/2]

CBlast4_queue_search_request_Base::TSubject & CBlast4_queue_search_request_Base::SetSubject ( void  )
inline

Assign a value to Subject data member.

Returns
Reference to the data value.

Definition at line 604 of file Blast4_queue_search_reques_.hpp.

References CBlast4_queue_search_request_Base::m_Subject, and CBlast4_queue_search_request_Base::ResetSubject().

◆ SetSubject_id() [1/3]

void CBlast4_simple_alignment_Base::SetSubject_id ( const TSubject_id value)
inline

Assign a value to Subject_id data member.

Parameters
valueValue to assign

Definition at line 433 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::m_set_State, CBlast4_simple_alignment_Base::m_Subject_id, and value.

◆ SetSubject_id() [2/3]

void CBlast4_simple_alignment_Base::SetSubject_id ( CBlast4_simple_alignment_Base::TSubject_id &&  value)
inline

◆ SetSubject_id() [3/3]

CBlast4_simple_alignment_Base::TSubject_id & CBlast4_simple_alignment_Base::SetSubject_id ( void  )
inline

Assign a value to Subject_id data member.

Returns
Reference to the data value.

Definition at line 447 of file Blast4_simple_alignment_.hpp.

References CBlast4_simple_alignment_Base::IsSetSubject_id(), CBlast4_simple_alignment_Base::m_set_State, CBlast4_simple_alignment_Base::m_Subject_id, and CSerialObject::UnassignedString().

◆ SetSubjects() [1/2]

void CBlast4_get_request_info_reply_Base::SetSubjects ( CBlast4_get_request_info_reply_Base::TSubjects value)

Assign a value to Subjects data member.

Parameters
valueReference to value.

Definition at line 150 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Subjects, and value.

◆ SetSubjects() [2/2]

CBlast4_get_request_info_reply_Base::TSubjects & CBlast4_get_request_info_reply_Base::SetSubjects ( void  )

Assign a value to Subjects data member.

Returns
Reference to the data value.

Definition at line 155 of file Blast_get_reque_info_reply_.cpp.

References CBlast4_get_request_info_reply_Base::m_Subjects.

◆ SetTarget_only() [1/2]

void CBlast4_get_sequences_request_Base::SetTarget_only ( CBlast4_get_sequences_request_Base::TTarget_only  value)
inline

Assign a value to Target_only data member.

Parameters
valueValue to assign

Definition at line 421 of file Blast4_get_sequenc_request_.hpp.

References CBlast4_get_sequences_request_Base::m_set_State, CBlast4_get_sequences_request_Base::m_Target_only, and value.

Referenced by s_BuildGetSeqRequest().

◆ SetTarget_only() [2/2]

CBlast4_get_sequences_request_Base::TTarget_only & CBlast4_get_sequences_request_Base::SetTarget_only ( void  )
inline

◆ SetTaxid() [1/2]

void CBlast4_database_info_Base::SetTaxid ( CBlast4_database_info_Base::TTaxid  value)
inline

Assign a value to Taxid data member.

Parameters
valueValue to assign

Definition at line 739 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State, CBlast4_database_info_Base::m_Taxid, and value.

◆ SetTaxid() [2/2]

CBlast4_database_info_Base::TTaxid & CBlast4_database_info_Base::SetTaxid ( void  )
inline

Assign a value to Taxid data member.

Returns
Reference to the data value.

Definition at line 746 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetTaxid(), CBlast4_database_info_Base::m_set_State, CBlast4_database_info_Base::m_Taxid, and CSerialObject::UnassignedByte().

◆ SetTotal_length() [1/2]

void CBlast4_database_info_Base::SetTotal_length ( CBlast4_database_info_Base::TTotal_length  value)
inline

Assign a value to Total_length data member.

Parameters
valueValue to assign

Definition at line 598 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::m_set_State, CBlast4_database_info_Base::m_Total_length, and value.

◆ SetTotal_length() [2/2]

CBlast4_database_info_Base::TTotal_length & CBlast4_database_info_Base::SetTotal_length ( void  )
inline

Assign a value to Total_length data member.

Returns
Reference to the data value.

Definition at line 605 of file Blast4_database_info_.hpp.

References CBlast4_database_info_Base::IsSetTotal_length(), CBlast4_database_info_Base::m_set_State, CBlast4_database_info_Base::m_Total_length, and CSerialObject::UnassignedByte().

◆ SetType() [1/5]

void CBlast4_parameter_info_Base::SetType ( const TType value)
inline

Assign a value to Type data member.

Parameters
valueValue to assign

Definition at line 268 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::m_set_State, CBlast4_parameter_info_Base::m_Type, and value.

◆ SetType() [2/5]

void CBlast4_parameter_info_Base::SetType ( CBlast4_parameter_info_Base::TType &&  value)
inline

◆ SetType() [3/5]

void CBlast4_database_Base::SetType ( CBlast4_database_Base::TType  value)
inline

Assign a value to Type data member.

Parameters
valueValue to assign

Definition at line 275 of file Blast4_database_.hpp.

References CBlast4_database_Base::m_set_State, CBlast4_database_Base::m_Type, and value.

Referenced by BOOST_AUTO_TEST_CASE(), CBlastServices::GetDatabaseInfoLegacy(), s_BuildGetSeqPartsRequest(), and s_BuildGetSeqRequest().

◆ SetType() [4/5]

CBlast4_database_Base::TType & CBlast4_database_Base::SetType ( void  )
inline

Assign a value to Type data member.

Returns
Reference to the data value.

Definition at line 282 of file Blast4_database_.hpp.

References CBlast4_database_Base::IsSetType(), CBlast4_database_Base::m_set_State, CBlast4_database_Base::m_Type, and CSerialObject::UnassignedByte().

◆ SetType() [5/5]

CBlast4_parameter_info_Base::TType & CBlast4_parameter_info_Base::SetType ( void  )
inline

Assign a value to Type data member.

Returns
Reference to the data value.

Definition at line 282 of file Blast4_parameter_info_.hpp.

References CBlast4_parameter_info_Base::IsSetType(), CBlast4_parameter_info_Base::m_set_State, CBlast4_parameter_info_Base::m_Type, and CSerialObject::UnassignedString().

◆ SetValue() [1/2]

void CBlast4_parameter_Base::SetValue ( CBlast4_parameter_Base::TValue value)

Assign a value to Value data member.

Parameters
valueReference to value.

Definition at line 66 of file Blast4_parameter_.cpp.

References CBlast4_parameter_Base::m_Value, and value.

◆ SetValue() [2/2]

CBlast4_parameter_Base::TValue & CBlast4_parameter_Base::SetValue ( void  )
inline

Assign a value to Value data member.

Returns
Reference to the data value.

Definition at line 271 of file Blast4_parameter_.hpp.

References CBlast4_parameter_Base::m_Value, and CBlast4_parameter_Base::ResetValue().

◆ ThrowInvalidSelection() [1/6]

void CBlast4_cutoff_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 87 of file Blast4_cutoff_.cpp.

References DIAG_COMPILE_INFO, CBlast4_cutoff_Base::m_choice, and CBlast4_cutoff_Base::sm_SelectionNames.

Referenced by CBlast4_cutoff_Base::CheckSelected().

◆ ThrowInvalidSelection() [2/6]

void CBlast4_queries_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 105 of file Blast4_queries_.cpp.

References DIAG_COMPILE_INFO, CBlast4_queries_Base::m_choice, and CBlast4_queries_Base::sm_SelectionNames.

Referenced by CBlast4_queries_Base::CheckSelected().

◆ ThrowInvalidSelection() [3/6]

void CBlast4_reply_body_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 181 of file Blast4_reply_body_.cpp.

References DIAG_COMPILE_INFO, CBlast4_reply_body_Base::m_choice, and CBlast4_reply_body_Base::sm_SelectionNames.

Referenced by CBlast4Client_Base::Ask(), and CBlast4_reply_body_Base::CheckSelected().

◆ ThrowInvalidSelection() [4/6]

void CBlast4_request_body_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 145 of file Blast4_request_body_.cpp.

References DIAG_COMPILE_INFO, CBlast4_request_body_Base::m_choice, and CBlast4_request_body_Base::sm_SelectionNames.

Referenced by CBlast4_request_body_Base::CheckSelected().

◆ ThrowInvalidSelection() [5/6]

void CBlast4_subject_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 106 of file Blast4_subject_.cpp.

References DIAG_COMPILE_INFO, CBlast4_subject_Base::m_choice, and CBlast4_subject_Base::sm_SelectionNames.

Referenced by CBlast4_subject_Base::CheckSelected().

◆ ThrowInvalidSelection() [6/6]

void CBlast4_value_Base::ThrowInvalidSelection ( E_Choice  index) const

Throw 'InvalidSelection' exception.

Parameters
indexExpected selection.

Definition at line 250 of file Blast4_value_.cpp.

References DIAG_COMPILE_INFO, CBlast4_value_Base::m_choice, and CBlast4_value_Base::sm_SelectionNames.

Referenced by CBlast4_value_Base::CheckSelected().

◆ Which() [1/6]

CBlast4_cutoff_Base::E_Choice CBlast4_cutoff_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 267 of file Blast4_cutoff_.hpp.

References CBlast4_cutoff_Base::m_choice.

◆ Which() [2/6]

CBlast4_queries_Base::E_Choice CBlast4_queries_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 265 of file Blast4_queries_.hpp.

References CBlast4_queries_Base::m_choice.

Referenced by BOOST_AUTO_TEST_CASE(), and CBlast4_queries::GetNumQueries().

◆ Which() [3/6]

CBlast4_reply_body_Base::E_Choice CBlast4_reply_body_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 634 of file Blast4_reply_body_.hpp.

References CBlast4_reply_body_Base::m_choice.

Referenced by CBlast4Client_Base::Ask().

◆ Which() [4/6]

CBlast4_request_body_Base::E_Choice CBlast4_request_body_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 505 of file Blast4_request_body_.hpp.

References CBlast4_request_body_Base::m_choice.

◆ Which() [5/6]

CBlast4_subject_Base::E_Choice CBlast4_subject_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 257 of file Blast4_subject_.hpp.

References CBlast4_subject_Base::m_choice.

◆ Which() [6/6]

CBlast4_value_Base::E_Choice CBlast4_value_Base::Which ( void  ) const
inline

Which variant is currently selected.

Returns
Choice state enumerator.

Definition at line 907 of file Blast4_value_.hpp.

References CBlast4_value_Base::m_choice.

Referenced by CBlast4Field::Match(), and CBlastOptionsBuilder::x_ProcessOneOption().

◆ x_Choice()

CBlast4Client_Base::TReplyChoice & CBlast4Client_Base::x_Choice ( CBlast4Client_Base::TReply reply)
inlineprivate

◆ ~CBlast4_alignments_for_query()

CBlast4_alignments_for_query::~CBlast4_alignments_for_query ( void  )

Definition at line 50 of file Blast4_alignment_for_query.cpp.

◆ ~CBlast4_alignments_for_query_Base()

CBlast4_alignments_for_query_Base::~CBlast4_alignments_for_query_Base ( void  )
virtual

Definition at line 87 of file Blast4_alignment_for_query_.cpp.

◆ ~CBlast4_archive()

CBlast4_archive::~CBlast4_archive ( void  )

Definition at line 50 of file Blast4_archive.cpp.

◆ ~CBlast4_archive_Base()

CBlast4_archive_Base::~CBlast4_archive_Base ( void  )
virtual

Definition at line 117 of file Blast4_archive_.cpp.

◆ ~CBlast4_cutoff()

CBlast4_cutoff::~CBlast4_cutoff ( void  )

Definition at line 50 of file Blast4_cutoff.cpp.

◆ ~CBlast4_cutoff_Base()

CBlast4_cutoff_Base::~CBlast4_cutoff_Base ( void  )
virtual

Definition at line 112 of file Blast4_cutoff_.cpp.

References CBlast4_cutoff_Base::Reset().

◆ ~CBlast4_database_Base()

CBlast4_database_Base::~CBlast4_database_Base ( void  )
virtual

Definition at line 81 of file Blast4_database_.cpp.

◆ ~CBlast4_database_info()

CBlast4_database_info::~CBlast4_database_info ( void  )

Definition at line 50 of file Blast4_database_info.cpp.

◆ ~CBlast4_database_info_Base()

CBlast4_database_info_Base::~CBlast4_database_info_Base ( void  )
virtual

Definition at line 135 of file Blast4_database_info_.cpp.

◆ ~CBlast4_error()

CBlast4_error::~CBlast4_error ( void  )

Definition at line 50 of file Blast4_error.cpp.

◆ ~CBlast4_error_Base()

CBlast4_error_Base::~CBlast4_error_Base ( void  )
virtual

Definition at line 81 of file Blast4_error_.cpp.

◆ ~CBlast4_finish_params_request()

CBlast4_finish_params_request::~CBlast4_finish_params_request ( void  )

Definition at line 50 of file Blast_finish_params_reques.cpp.

◆ ~CBlast4_finish_params_request_Base()

CBlast4_finish_params_request_Base::~CBlast4_finish_params_request_Base ( void  )
virtual

Definition at line 114 of file Blast_finish_params_reques_.cpp.

◆ ~CBlast4_get_databases_ex_reply()

CBlast4_get_databases_ex_reply::~CBlast4_get_databases_ex_reply ( void  )

Definition at line 50 of file Blast4_get_databa_ex_reply.cpp.

◆ ~CBlast4_get_databases_ex_reply_Base()

CBlast4_get_databases_ex_reply_Base::~CBlast4_get_databases_ex_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_databa_ex_reply_.cpp.

◆ ~CBlast4_get_databases_ex_request()

CBlast4_get_databases_ex_request::~CBlast4_get_databases_ex_request ( void  )

Definition at line 50 of file Blast_get_databa_ex_reques.cpp.

◆ ~CBlast4_get_databases_ex_request_Base()

CBlast4_get_databases_ex_request_Base::~CBlast4_get_databases_ex_request_Base ( void  )
virtual

Definition at line 90 of file Blast_get_databa_ex_reques_.cpp.

◆ ~CBlast4_get_databases_reply()

CBlast4_get_databases_reply::~CBlast4_get_databases_reply ( void  )

Definition at line 50 of file Blast4_get_databases_reply.cpp.

◆ ~CBlast4_get_databases_reply_Base()

CBlast4_get_databases_reply_Base::~CBlast4_get_databases_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_databases_reply_.cpp.

◆ ~CBlast4_get_matrices_reply()

CBlast4_get_matrices_reply::~CBlast4_get_matrices_reply ( void  )

Definition at line 50 of file Blast4_get_matrices_reply.cpp.

◆ ~CBlast4_get_matrices_reply_Base()

CBlast4_get_matrices_reply_Base::~CBlast4_get_matrices_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_matrices_reply_.cpp.

◆ ~CBlast4_get_parameters_reply()

CBlast4_get_parameters_reply::~CBlast4_get_parameters_reply ( void  )

Definition at line 50 of file Blast4_get_parameter_reply.cpp.

◆ ~CBlast4_get_parameters_reply_Base()

CBlast4_get_parameters_reply_Base::~CBlast4_get_parameters_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_parameter_reply_.cpp.

◆ ~CBlast4_get_paramsets_reply()

CBlast4_get_paramsets_reply::~CBlast4_get_paramsets_reply ( void  )

Definition at line 50 of file Blast4_get_paramsets_reply.cpp.

◆ ~CBlast4_get_paramsets_reply_Base()

CBlast4_get_paramsets_reply_Base::~CBlast4_get_paramsets_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_paramsets_reply_.cpp.

◆ ~CBlast4_get_programs_reply()

CBlast4_get_programs_reply::~CBlast4_get_programs_reply ( void  )

Definition at line 50 of file Blast4_get_programs_reply.cpp.

◆ ~CBlast4_get_programs_reply_Base()

CBlast4_get_programs_reply_Base::~CBlast4_get_programs_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_programs_reply_.cpp.

◆ ~CBlast4_get_queries_reply()

CBlast4_get_queries_reply::~CBlast4_get_queries_reply ( void  )

Definition at line 50 of file Blast4_get_queries_reply.cpp.

◆ ~CBlast4_get_queries_reply_Base()

CBlast4_get_queries_reply_Base::~CBlast4_get_queries_reply_Base ( void  )
virtual

Definition at line 90 of file Blast4_get_queries_reply_.cpp.

◆ ~CBlast4_get_request_info_reply()

CBlast4_get_request_info_reply::~CBlast4_get_request_info_reply ( void  )

Definition at line 50 of file Blast_get_reque_info_reply.cpp.

◆ ~CBlast4_get_request_info_reply_Base()

CBlast4_get_request_info_reply_Base::~CBlast4_get_request_info_reply_Base ( void  )
virtual

Definition at line 206 of file Blast_get_reque_info_reply_.cpp.

◆ ~CBlast4_get_request_info_request()

CBlast4_get_request_info_request::~CBlast4_get_request_info_request ( void  )

Definition at line 50 of file Blast_get_reque_info_reque.cpp.

◆ ~CBlast4_get_request_info_request_Base()

CBlast4_get_request_info_request_Base::~CBlast4_get_request_info_request_Base ( void  )
virtual

Definition at line 78 of file Blast_get_reque_info_reque_.cpp.

◆ ~CBlast4_get_search_info_reply()

CBlast4_get_search_info_reply::~CBlast4_get_search_info_reply ( void  )

Definition at line 50 of file Blast_get_searc_info_reply.cpp.

◆ ~CBlast4_get_search_info_reply_Base()

CBlast4_get_search_info_reply_Base::~CBlast4_get_search_info_reply_Base ( void  )
virtual

Definition at line 98 of file Blast_get_searc_info_reply_.cpp.

◆ ~CBlast4_get_search_info_request()

CBlast4_get_search_info_request::~CBlast4_get_search_info_request ( void  )

Definition at line 50 of file Blast_get_searc_info_reque.cpp.

◆ ~CBlast4_get_search_info_request_Base()

CBlast4_get_search_info_request_Base::~CBlast4_get_search_info_request_Base ( void  )
virtual

Definition at line 98 of file Blast_get_searc_info_reque_.cpp.

◆ ~CBlast4_get_search_results_reply()

CBlast4_get_search_results_reply::~CBlast4_get_search_results_reply ( void  )

Definition at line 50 of file Blas_get_searc_resul_reply.cpp.

◆ ~CBlast4_get_search_results_reply_Base()

CBlast4_get_search_results_reply_Base::~CBlast4_get_search_results_reply_Base ( void  )
virtual

Definition at line 176 of file Blas_get_searc_resul_reply_.cpp.

◆ ~CBlast4_get_search_results_request()

CBlast4_get_search_results_request::~CBlast4_get_search_results_request ( void  )

Definition at line 50 of file Blas_get_searc_resul_reque.cpp.

◆ ~CBlast4_get_search_results_request_Base()

CBlast4_get_search_results_request_Base::~CBlast4_get_search_results_request_Base ( void  )
virtual

Definition at line 81 of file Blas_get_searc_resul_reque_.cpp.

◆ ~CBlast4_get_search_status_reply()

CBlast4_get_search_status_reply::~CBlast4_get_search_status_reply ( void  )

Definition at line 50 of file Blas_get_searc_statu_reply.cpp.

◆ ~CBlast4_get_search_status_reply_Base()

CBlast4_get_search_status_reply_Base::~CBlast4_get_search_status_reply_Base ( void  )
virtual

Definition at line 78 of file Blas_get_searc_statu_reply_.cpp.

◆ ~CBlast4_get_search_status_request()

CBlast4_get_search_status_request::~CBlast4_get_search_status_request ( void  )

Definition at line 50 of file Blas_get_searc_statu_reque.cpp.

◆ ~CBlast4_get_search_status_request_Base()

CBlast4_get_search_status_request_Base::~CBlast4_get_search_status_request_Base ( void  )
virtual

Definition at line 78 of file Blas_get_searc_statu_reque_.cpp.

◆ ~CBlast4_get_search_strategy_request()

CBlast4_get_search_strategy_request::~CBlast4_get_search_strategy_request ( void  )

Definition at line 50 of file Blas_get_searc_strat_reque.cpp.

◆ ~CBlast4_get_search_strategy_request_Base()

CBlast4_get_search_strategy_request_Base::~CBlast4_get_search_strategy_request_Base ( void  )
virtual

Definition at line 78 of file Blas_get_searc_strat_reque_.cpp.

◆ ~CBlast4_get_seq_parts_reply()

CBlast4_get_seq_parts_reply::~CBlast4_get_seq_parts_reply ( void  )

Definition at line 50 of file Blast4_get_seq_parts_reply.cpp.

◆ ~CBlast4_get_seq_parts_reply_Base()

CBlast4_get_seq_parts_reply_Base::~CBlast4_get_seq_parts_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_seq_parts_reply_.cpp.

◆ ~CBlast4_get_seq_parts_request()

CBlast4_get_seq_parts_request::~CBlast4_get_seq_parts_request ( void  )

Definition at line 50 of file Blast_get_seq_parts_reques.cpp.

◆ ~CBlast4_get_seq_parts_request_Base()

CBlast4_get_seq_parts_request_Base::~CBlast4_get_seq_parts_request_Base ( void  )
virtual

Definition at line 99 of file Blast_get_seq_parts_reques_.cpp.

◆ ~CBlast4_get_sequences_reply()

CBlast4_get_sequences_reply::~CBlast4_get_sequences_reply ( void  )

Definition at line 50 of file Blast4_get_sequences_reply.cpp.

◆ ~CBlast4_get_sequences_reply_Base()

CBlast4_get_sequences_reply_Base::~CBlast4_get_sequences_reply_Base ( void  )
virtual

Definition at line 74 of file Blast4_get_sequences_reply_.cpp.

◆ ~CBlast4_get_sequences_request()

CBlast4_get_sequences_request::~CBlast4_get_sequences_request ( void  )

Definition at line 50 of file Blast4_get_sequenc_request.cpp.

◆ ~CBlast4_get_sequences_request_Base()

CBlast4_get_sequences_request_Base::~CBlast4_get_sequences_request_Base ( void  )
virtual

Definition at line 104 of file Blast4_get_sequenc_request_.cpp.

◆ ~CBlast4_get_windowmasked_taxids_reply()

CBlast4_get_windowmasked_taxids_reply::~CBlast4_get_windowmasked_taxids_reply ( void  )

Definition at line 50 of file Blas_get_windo_taxid_reply.cpp.

◆ ~CBlast4_get_windowmasked_taxids_reply_Base()

CBlast4_get_windowmasked_taxids_reply_Base::~CBlast4_get_windowmasked_taxids_reply_Base ( void  )
virtual

Definition at line 73 of file Blas_get_windo_taxid_reply_.cpp.

◆ ~CBlast4_ka_block()

CBlast4_ka_block::~CBlast4_ka_block ( void  )

Definition at line 50 of file Blast4_ka_block.cpp.

◆ ~CBlast4_ka_block_Base()

CBlast4_ka_block_Base::~CBlast4_ka_block_Base ( void  )
virtual

Definition at line 79 of file Blast4_ka_block_.cpp.

◆ ~CBlast4_mask()

CBlast4_mask::~CBlast4_mask ( void  )

Definition at line 50 of file Blast4_mask.cpp.

◆ ~CBlast4_mask_Base()

CBlast4_mask_Base::~CBlast4_mask_Base ( void  )
virtual

Definition at line 82 of file Blast4_mask_.cpp.

◆ ~CBlast4_matrix_id()

CBlast4_matrix_id::~CBlast4_matrix_id ( void  )

Definition at line 50 of file Blast4_matrix_id.cpp.

◆ ~CBlast4_matrix_id_Base()

CBlast4_matrix_id_Base::~CBlast4_matrix_id_Base ( void  )
virtual

Definition at line 81 of file Blast4_matrix_id_.cpp.

◆ ~CBlast4_parameter()

CBlast4_parameter::~CBlast4_parameter ( void  )

Definition at line 50 of file Blast4_parameter.cpp.

◆ ~CBlast4_parameter_Base()

CBlast4_parameter_Base::~CBlast4_parameter_Base ( void  )
virtual

Definition at line 98 of file Blast4_parameter_.cpp.

◆ ~CBlast4_parameter_info()

CBlast4_parameter_info::~CBlast4_parameter_info ( void  )

Definition at line 50 of file Blast4_parameter_info.cpp.

◆ ~CBlast4_parameter_info_Base()

CBlast4_parameter_info_Base::~CBlast4_parameter_info_Base ( void  )
virtual

Definition at line 86 of file Blast4_parameter_info_.cpp.

◆ ~CBlast4_parameters_Base()

CBlast4_parameters_Base::~CBlast4_parameters_Base ( void  )
virtual

Definition at line 74 of file Blast4_parameters_.cpp.

◆ ~CBlast4_phi_alignments()

CBlast4_phi_alignments::~CBlast4_phi_alignments ( void  )

Definition at line 50 of file Blast4_phi_alignments.cpp.

◆ ~CBlast4_phi_alignments_Base()

CBlast4_phi_alignments_Base::~CBlast4_phi_alignments_Base ( void  )
virtual

Definition at line 82 of file Blast4_phi_alignments_.cpp.

◆ ~CBlast4_program_info()

CBlast4_program_info::~CBlast4_program_info ( void  )

Definition at line 50 of file Blast4_program_info.cpp.

◆ ~CBlast4_program_info_Base()

CBlast4_program_info_Base::~CBlast4_program_info_Base ( void  )
virtual

Definition at line 86 of file Blast4_program_info_.cpp.

◆ ~CBlast4_queries_Base()

CBlast4_queries_Base::~CBlast4_queries_Base ( void  )
virtual

Definition at line 175 of file Blast4_queries_.cpp.

References CBlast4_queries_Base::Reset().

◆ ~CBlast4_queue_search_reply()

CBlast4_queue_search_reply::~CBlast4_queue_search_reply ( void  )

Definition at line 50 of file Blast4_queue_search_reply.cpp.

◆ ~CBlast4_queue_search_reply_Base()

CBlast4_queue_search_reply_Base::~CBlast4_queue_search_reply_Base ( void  )
virtual

Definition at line 78 of file Blast4_queue_search_reply_.cpp.

◆ ~CBlast4_queue_search_request()

CBlast4_queue_search_request::~CBlast4_queue_search_request ( void  )

Definition at line 50 of file Blast4_queue_search_reques.cpp.

◆ ~CBlast4_queue_search_request_Base()

CBlast4_queue_search_request_Base::~CBlast4_queue_search_request_Base ( void  )
virtual

Definition at line 190 of file Blast4_queue_search_reques_.cpp.

◆ ~CBlast4_range_Base()

CBlast4_range_Base::~CBlast4_range_Base ( void  )
virtual

Definition at line 77 of file Blast4_range_.cpp.

◆ ~CBlast4_reply()

CBlast4_reply::~CBlast4_reply ( void  )

Definition at line 50 of file Blast4_reply.cpp.

◆ ~CBlast4_reply_Base()

CBlast4_reply_Base::~CBlast4_reply_Base ( void  )
virtual

Definition at line 99 of file Blast4_reply_.cpp.

◆ ~CBlast4_reply_body()

CBlast4_reply_body::~CBlast4_reply_body ( void  )

Definition at line 50 of file Blast4_reply_body.cpp.

◆ ~CBlast4_reply_body_Base()

CBlast4_reply_body_Base::~CBlast4_reply_body_Base ( void  )
virtual

Definition at line 572 of file Blast4_reply_body_.cpp.

References CBlast4_reply_body_Base::Reset().

◆ ~CBlast4_request()

CBlast4_request::~CBlast4_request ( void  )

Definition at line 50 of file Blast4_request.cpp.

◆ ~CBlast4_request_Base()

CBlast4_request_Base::~CBlast4_request_Base ( void  )
virtual

Definition at line 98 of file Blast4_request_.cpp.

◆ ~CBlast4_request_body()

CBlast4_request_body::~CBlast4_request_body ( void  )

Definition at line 50 of file Blast4_request_body.cpp.

◆ ~CBlast4_request_body_Base()

CBlast4_request_body_Base::~CBlast4_request_body_Base ( void  )
virtual

Definition at line 381 of file Blast4_request_body_.cpp.

References CBlast4_request_body_Base::Reset().

◆ ~CBlast4_seq_part_data()

CBlast4_seq_part_data::~CBlast4_seq_part_data ( void  )

Definition at line 50 of file Blast4_seq_part_data.cpp.

◆ ~CBlast4_seq_part_data_Base()

CBlast4_seq_part_data_Base::~CBlast4_seq_part_data_Base ( void  )
virtual

Definition at line 108 of file Blast4_seq_part_data_.cpp.

◆ ~CBlast4_simple_alignment()

CBlast4_simple_alignment::~CBlast4_simple_alignment ( void  )

Definition at line 50 of file Blast4_simple_alignment.cpp.

◆ ~CBlast4_simple_alignment_Base()

CBlast4_simple_alignment_Base::~CBlast4_simple_alignment_Base ( void  )
virtual

Definition at line 124 of file Blast4_simple_alignment_.cpp.

◆ ~CBlast4_simple_results()

CBlast4_simple_results::~CBlast4_simple_results ( void  )

Definition at line 50 of file Blast4_simple_results.cpp.

◆ ~CBlast4_simple_results_Base()

CBlast4_simple_results_Base::~CBlast4_simple_results_Base ( void  )
virtual

Definition at line 79 of file Blast4_simple_results_.cpp.

◆ ~CBlast4_subject()

CBlast4_subject::~CBlast4_subject ( void  )

Definition at line 50 of file Blast4_subject.cpp.

◆ ~CBlast4_subject_Base()

CBlast4_subject_Base::~CBlast4_subject_Base ( void  )
virtual

Definition at line 138 of file Blast4_subject_.cpp.

References CBlast4_subject_Base::Reset().

◆ ~CBlast4_task_info()

CBlast4_task_info::~CBlast4_task_info ( void  )

Definition at line 50 of file Blast4_task_info.cpp.

◆ ~CBlast4_task_info_Base()

CBlast4_task_info_Base::~CBlast4_task_info_Base ( void  )
virtual

Definition at line 86 of file Blast4_task_info_.cpp.

◆ ~CBlast4_value()

CBlast4_value::~CBlast4_value ( void  )

Definition at line 50 of file Blast4_value.cpp.

◆ ~CBlast4_value_Base()

CBlast4_value_Base::~CBlast4_value_Base ( void  )
virtual

Definition at line 504 of file Blast4_value_.cpp.

References CBlast4_value_Base::Reset().

◆ ~CBlast4Client()

CBlast4Client::~CBlast4Client ( void  )

Definition at line 50 of file blastclient.cpp.

◆ ~CBlast4Client_Base()

CBlast4Client_Base::~CBlast4Client_Base ( void  )
virtual

Definition at line 281 of file blastclient_.cpp.

Variable Documentation

◆ 

union { ... }

◆ 

union { ... }

◆ 

union { ... }

◆ 

union { ... }

◆ 

union { ... }

◆ m_Algorithm_options [1/2]

CRef< TAlgorithm_options > CBlast4_queue_search_request_Base::m_Algorithm_options
private

◆ m_Algorithm_options [2/2]

CRef< TAlgorithm_options > CBlast4_get_request_info_reply_Base::m_Algorithm_options
private

◆ m_Alignments [1/2]

CRef< TAlignments > CBlast4_get_search_results_reply_Base::m_Alignments
private

◆ m_Alignments [2/2]

list< CRef< CBlast4_simple_alignment > > CBlast4_alignments_for_query_Base::m_Alignments
private

◆ m_All_alignments

list< CRef< CBlast4_alignments_for_query > > CBlast4_simple_results_Base::m_All_alignments
private

◆ m_Big_integer [1/2]

TBig_integer CBlast4_value_Base::m_Big_integer

◆  [2/2]

TBig_integer { ... } ::m_Big_integer

Definition at line 875 of file Blast4_value_.hpp.

◆ m_Big_integer_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TBig_integer_list> CBlast4_value_Base::m_Big_integer_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TBig_integer_list> { ... } ::m_Big_integer_list

Definition at line 880 of file Blast4_value_.hpp.

◆ m_Bioseq_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TBioseq_list> CBlast4_value_Base::m_Bioseq_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TBioseq_list> { ... } ::m_Bioseq_list

Definition at line 881 of file Blast4_value_.hpp.

◆ m_Bit_score

double CBlast4_simple_alignment_Base::m_Bit_score
private

◆ m_Body [1/2]

CRef< TBody > CBlast4_reply_Base::m_Body
private

◆ m_Body [2/2]

CRef< TBody > CBlast4_request_Base::m_Body
private

◆ m_Boolean [1/2]

TBoolean CBlast4_value_Base::m_Boolean

◆  [2/2]

TBoolean { ... } ::m_Boolean

Definition at line 876 of file Blast4_value_.hpp.

◆ m_Boolean_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TBoolean_list> CBlast4_value_Base::m_Boolean_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TBoolean_list> { ... } ::m_Boolean_list

Definition at line 882 of file Blast4_value_.hpp.

◆ m_choice [1/6]

E_Choice CBlast4_cutoff_Base::m_choice
private

◆ m_choice [2/6]

E_Choice CBlast4_queries_Base::m_choice
private

◆ m_choice [3/6]

E_Choice CBlast4_reply_body_Base::m_choice
private

Definition at line 615 of file Blast4_reply_body_.hpp.

Referenced by CBlast4_reply_body_Base::CheckSelected(), CBlast4_reply_body_Base::DoSelect(), CBlast4_reply_body_Base::IsFinish_params(), CBlast4_reply_body_Base::IsGet_databases(), CBlast4_reply_body_Base::IsGet_databases_ex(), CBlast4_reply_body_Base::IsGet_matrices(), CBlast4_reply_body_Base::IsGet_parameters(), CBlast4_reply_body_Base::IsGet_paramsets(), CBlast4_reply_body_Base::IsGet_programs(), CBlast4_reply_body_Base::IsGet_protocol_info(), CBlast4_reply_body_Base::IsGet_queries(), CBlast4_reply_body_Base::IsGet_request_info(), CBlast4_reply_body_Base::IsGet_search_info(), CBlast4_reply_body_Base::IsGet_search_results(), CBlast4_reply_body_Base::IsGet_sequence_parts(), CBlast4_reply_body_Base::IsGet_sequences(), CBlast4_reply_body_Base::IsGet_windowmasked_taxids(), CBlast4_reply_body_Base::IsQueue_search(), CBlast4_reply_body_Base::Reset(), CBlast4_reply_body_Base::ResetSelection(), CBlast4_reply_body_Base::SetFinish_params(), CBlast4_reply_body_Base::SetGet_databases(), CBlast4_reply_body_Base::SetGet_databases_ex(), CBlast4_reply_body_Base::SetGet_matrices(), CBlast4_reply_body_Base::SetGet_parameters(), CBlast4_reply_body_Base::SetGet_paramsets(), CBlast4_reply_body_Base::SetGet_programs(), CBlast4_reply_body_Base::SetGet_protocol_info(), CBlast4_reply_body_Base::SetGet_queries(), CBlast4_reply_body_Base::SetGet_request_info(), CBlast4_reply_body_Base::SetGet_search_info(), CBlast4_reply_body_Base::SetGet_search_results(), CBlast4_reply_body_Base::SetGet_sequence_parts(), CBlast4_reply_body_Base::SetGet_sequences(), CBlast4_reply_body_Base::SetGet_windowmasked_taxids(), CBlast4_reply_body_Base::SetQueue_search(), CBlast4_reply_body_Base::ThrowInvalidSelection(), and CBlast4_reply_body_Base::Which().

◆ m_choice [4/6]

E_Choice CBlast4_request_body_Base::m_choice
private

◆ m_choice [5/6]

E_Choice CBlast4_subject_Base::m_choice
private

◆ m_choice [6/6]

E_Choice CBlast4_value_Base::m_choice
private

Definition at line 868 of file Blast4_value_.hpp.

Referenced by CBlast4_value_Base::CheckSelected(), CBlast4_value_Base::DoSelect(), CBlast4_value_Base::IsBig_integer(), CBlast4_value_Base::IsBig_integer_list(), CBlast4_value_Base::IsBioseq(), CBlast4_value_Base::IsBioseq_list(), CBlast4_value_Base::IsBioseq_set(), CBlast4_value_Base::IsBoolean(), CBlast4_value_Base::IsBoolean_list(), CBlast4_value_Base::IsCutoff(), CBlast4_value_Base::IsCutoff_list(), CBlast4_value_Base::IsInteger(), CBlast4_value_Base::IsInteger_list(), CBlast4_value_Base::IsMatrix(), CBlast4_value_Base::IsMatrix_list(), CBlast4_value_Base::IsQuery_mask(), CBlast4_value_Base::IsReal(), CBlast4_value_Base::IsReal_list(), CBlast4_value_Base::IsSeq_align(), CBlast4_value_Base::IsSeq_align_list(), CBlast4_value_Base::IsSeq_align_set(), CBlast4_value_Base::IsSeq_id(), CBlast4_value_Base::IsSeq_id_list(), CBlast4_value_Base::IsSeq_loc(), CBlast4_value_Base::IsSeq_loc_list(), CBlast4_value_Base::IsStrand_type(), CBlast4_value_Base::IsStrand_type_list(), CBlast4_value_Base::IsString(), CBlast4_value_Base::IsString_list(), CBlast4_value_Base::Reset(), CBlast4_value_Base::ResetSelection(), CBlast4_value_Base::SetBioseq(), CBlast4_value_Base::SetBioseq_set(), CBlast4_value_Base::SetCutoff(), CBlast4_value_Base::SetMatrix(), CBlast4_value_Base::SetQuery_mask(), CBlast4_value_Base::SetSeq_align(), CBlast4_value_Base::SetSeq_align_set(), CBlast4_value_Base::SetSeq_id(), CBlast4_value_Base::SetSeq_loc(), CBlast4_value_Base::ThrowInvalidSelection(), and CBlast4_value_Base::Which().

◆ m_Code

int CBlast4_error_Base::m_Code
private

◆ m_Created_by

string CBlast4_get_request_info_reply_Base::m_Created_by
private

◆ m_Cutoff_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TCutoff_list> CBlast4_value_Base::m_Cutoff_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TCutoff_list> { ... } ::m_Cutoff_list

Definition at line 883 of file Blast4_value_.hpp.

◆ m_data [1/10]

set< int > CBlast4_get_windowmasked_taxids_reply_Base::m_data
private

◆ m_data [2/10]

list< CRef< CBlast4_database_info > > CBlast4_get_databases_ex_reply_Base::m_data
private

◆ m_data [3/10]

list< CRef< CBlast4_database_info > > CBlast4_get_databases_reply_Base::m_data
private

◆ m_data [4/10]

list< CRef< CBlast4_matrix_id > > CBlast4_get_matrices_reply_Base::m_data
private

◆ m_data [5/10]

list< CRef< CBlast4_parameter_info > > CBlast4_get_parameters_reply_Base::m_data
private

◆ m_data [6/10]

list< CRef< CBlast4_task_info > > CBlast4_get_paramsets_reply_Base::m_data
private

◆ m_data [7/10]

list< CRef< CBlast4_program_info > > CBlast4_get_programs_reply_Base::m_data
private

◆ m_data [8/10]

list< CRef< CBlast4_seq_part_data > > CBlast4_get_seq_parts_reply_Base::m_data
private

◆ m_data [9/10]

list< CRef< CBioseq > > CBlast4_get_sequences_reply_Base::m_data
private

◆ m_data [10/10]

list< CRef< CBlast4_parameter > > CBlast4_parameters_Base::m_data
private

◆ m_Data

CRef< TData > CBlast4_seq_part_data_Base::m_Data
private

◆ m_Database [1/4]

CRef< TDatabase > CBlast4_database_info_Base::m_Database
private

◆ m_Database [2/4]

CRef< TDatabase > CBlast4_get_sequences_request_Base::m_Database
private

◆ m_Database [3/4]

CRef< TDatabase > CBlast4_get_request_info_reply_Base::m_Database
private

◆ m_Database [4/4]

CRef< TDatabase > CBlast4_get_seq_parts_request_Base::m_Database
private

◆ m_DefaultRequest

CRef<TRequest> CBlast4Client_Base::m_DefaultRequest
private

◆ m_Description

string CBlast4_database_info_Base::m_Description
private

◆ m_Documentation

string CBlast4_task_info_Base::m_Documentation
private

◆ m_dummy_pointer_for_alignment [1/2]

void* CBlast4_subject_Base::m_dummy_pointer_for_alignment

Definition at line 243 of file Blast4_subject_.hpp.

◆  [2/2]

void* { ... } ::m_dummy_pointer_for_alignment

Definition at line 243 of file Blast4_subject_.hpp.

◆ m_E_value [1/3]

TE_value CBlast4_cutoff_Base::m_E_value

◆  [2/3]

TE_value { ... } ::m_E_value

Definition at line 252 of file Blast4_cutoff_.hpp.

◆ m_E_value [3/3]

double CBlast4_simple_alignment_Base::m_E_value
private

◆ m_End

int CBlast4_range_Base::m_End
private

◆ m_Errors

list< CRef< CBlast4_error > > CBlast4_reply_Base::m_Errors
private

◆ m_Extended

CRef< TExtended > CBlast4_database_info_Base::m_Extended
private

◆ m_Format_options [1/2]

CRef< TFormat_options > CBlast4_queue_search_request_Base::m_Format_options
private

◆ m_Format_options [2/2]

CRef< TFormat_options > CBlast4_get_request_info_reply_Base::m_Format_options
private

◆ m_Frame

EBlast4_frame_type CBlast4_mask_Base::m_Frame
private

◆ m_Full_query_range

CRef< TFull_query_range > CBlast4_simple_alignment_Base::m_Full_query_range
private

◆ m_Full_subject_range

CRef< TFull_subject_range > CBlast4_simple_alignment_Base::m_Full_subject_range
private

◆ m_Gapped

bool CBlast4_ka_block_Base::m_Gapped
private

◆ m_H

double CBlast4_ka_block_Base::m_H
private

◆ m_Id

CRef< TId > CBlast4_seq_part_data_Base::m_Id
private

◆ m_Ident

string CBlast4_request_Base::m_Ident
private

◆ m_Info [1/2]

CRef< TInfo > CBlast4_get_search_info_reply_Base::m_Info
private

◆ m_Info [2/2]

CRef< TInfo > CBlast4_get_search_info_request_Base::m_Info
private

◆ m_Integer [1/2]

TInteger CBlast4_value_Base::m_Integer

◆  [2/2]

TInteger { ... } ::m_Integer

Definition at line 877 of file Blast4_value_.hpp.

◆ m_Integer_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TInteger_list> CBlast4_value_Base::m_Integer_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TInteger_list> { ... } ::m_Integer_list

Definition at line 884 of file Blast4_value_.hpp.

◆ m_K

double CBlast4_ka_block_Base::m_K
private

◆ m_Ka_blocks

list< CRef< CBlast4_ka_block > > CBlast4_get_search_results_reply_Base::m_Ka_blocks
private

◆ m_Lambda

double CBlast4_ka_block_Base::m_Lambda
private

◆ m_Last_updated

string CBlast4_database_info_Base::m_Last_updated
private

◆ m_Locations

list< CRef< CSeq_loc > > CBlast4_mask_Base::m_Locations
private

◆ m_Masks

list< CRef< CBlast4_mask > > CBlast4_get_search_results_reply_Base::m_Masks
private

◆ m_Matrix_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TMatrix_list> CBlast4_value_Base::m_Matrix_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TMatrix_list> { ... } ::m_Matrix_list

Definition at line 885 of file Blast4_value_.hpp.

◆ m_Message

string CBlast4_error_Base::m_Message
private

◆ m_Messages

list< CRef< CBlast4_error > > CBlast4_archive_Base::m_Messages
private

◆ m_Name [1/5]

string CBlast4_database_Base::m_Name
private

◆ m_Name [2/5]

string CBlast4_matrix_id_Base::m_Name
private

◆ m_Name [3/5]

string CBlast4_parameter_Base::m_Name
private

◆ m_Name [4/5]

string CBlast4_parameter_info_Base::m_Name
private

◆ m_Name [5/5]

string CBlast4_task_info_Base::m_Name
private

◆ m_Num_alignments

int CBlast4_phi_alignments_Base::m_Num_alignments
private

◆ m_Num_identities

int CBlast4_simple_alignment_Base::m_Num_identities
private

◆ m_Num_indels

int CBlast4_simple_alignment_Base::m_Num_indels
private

◆ m_Num_sequences

Int8 CBlast4_database_info_Base::m_Num_sequences
private

◆ m_object [1/7]

NCBI_NS_NCBI::CSerialObject* CBlast4_queries_Base::m_object

◆  [2/7]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 251 of file Blast4_queries_.hpp.

◆ m_object [3/7]

NCBI_NS_NCBI::CSerialObject* CBlast4_reply_body_Base::m_object
private

Definition at line 621 of file Blast4_reply_body_.hpp.

Referenced by CBlast4_reply_body_Base::DoSelect(), CBlast4_reply_body_Base::GetFinish_params(), CBlast4_reply_body_Base::GetGet_databases(), CBlast4_reply_body_Base::GetGet_databases_ex(), CBlast4_reply_body_Base::GetGet_matrices(), CBlast4_reply_body_Base::GetGet_parameters(), CBlast4_reply_body_Base::GetGet_paramsets(), CBlast4_reply_body_Base::GetGet_programs(), CBlast4_reply_body_Base::GetGet_protocol_info(), CBlast4_reply_body_Base::GetGet_queries(), CBlast4_reply_body_Base::GetGet_request_info(), CBlast4_reply_body_Base::GetGet_search_info(), CBlast4_reply_body_Base::GetGet_search_results(), CBlast4_reply_body_Base::GetGet_sequence_parts(), CBlast4_reply_body_Base::GetGet_sequences(), CBlast4_reply_body_Base::GetGet_windowmasked_taxids(), CBlast4_reply_body_Base::GetQueue_search(), CBlast4_reply_body_Base::ResetSelection(), CBlast4_reply_body_Base::SetFinish_params(), CBlast4_reply_body_Base::SetGet_databases(), CBlast4_reply_body_Base::SetGet_databases_ex(), CBlast4_reply_body_Base::SetGet_matrices(), CBlast4_reply_body_Base::SetGet_parameters(), CBlast4_reply_body_Base::SetGet_paramsets(), CBlast4_reply_body_Base::SetGet_programs(), CBlast4_reply_body_Base::SetGet_protocol_info(), CBlast4_reply_body_Base::SetGet_queries(), CBlast4_reply_body_Base::SetGet_request_info(), CBlast4_reply_body_Base::SetGet_search_info(), CBlast4_reply_body_Base::SetGet_search_results(), CBlast4_reply_body_Base::SetGet_sequence_parts(), CBlast4_reply_body_Base::SetGet_sequences(), CBlast4_reply_body_Base::SetGet_windowmasked_taxids(), and CBlast4_reply_body_Base::SetQueue_search().

◆ m_object [4/7]

NCBI_NS_NCBI::CSerialObject* CBlast4_request_body_Base::m_object

◆  [5/7]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 491 of file Blast4_request_body_.hpp.

◆ m_object [6/7]

NCBI_NS_NCBI::CSerialObject* CBlast4_value_Base::m_object

◆  [7/7]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 893 of file Blast4_value_.hpp.

◆ m_Params [1/2]

CRef< TParams > CBlast4_finish_params_request_Base::m_Params
private

◆ m_Params [2/2]

CRef< TParams > CBlast4_get_databases_ex_request_Base::m_Params
private

◆ m_Paramset [1/2]

string CBlast4_queue_search_request_Base::m_Paramset
private

◆ m_Paramset [2/2]

string CBlast4_finish_params_request_Base::m_Paramset
private

◆ m_Phi_alignments

CRef< TPhi_alignments > CBlast4_get_search_results_reply_Base::m_Phi_alignments
private

◆ m_Program [1/4]

string CBlast4_program_info_Base::m_Program
private

◆ m_Program [2/4]

string CBlast4_queue_search_request_Base::m_Program
private

◆ m_Program [3/4]

string CBlast4_finish_params_request_Base::m_Program
private

◆ m_Program [4/4]

string CBlast4_get_request_info_reply_Base::m_Program
private

◆ m_Program_options [1/2]

CRef< TProgram_options > CBlast4_queue_search_request_Base::m_Program_options
private

◆ m_Program_options [2/2]

CRef< TProgram_options > CBlast4_get_request_info_reply_Base::m_Program_options
private

◆ m_Pssm

CRef< TPssm > CBlast4_get_search_results_reply_Base::m_Pssm
private

◆ m_Queries [1/3]

CRef< TQueries > CBlast4_get_queries_reply_Base::m_Queries
private

◆ m_Queries [2/3]

CRef< TQueries > CBlast4_queue_search_request_Base::m_Queries
private

◆ m_Queries [3/3]

CRef< TQueries > CBlast4_get_request_info_reply_Base::m_Queries
private

◆ m_Query_id

string CBlast4_alignments_for_query_Base::m_Query_id
private

◆  [1/2]

TRaw_score { ... } ::m_Raw_score

Definition at line 253 of file Blast4_cutoff_.hpp.

◆ m_Raw_score [2/2]

TRaw_score CBlast4_cutoff_Base::m_Raw_score

◆  [1/2]

TReal { ... } ::m_Real

Definition at line 878 of file Blast4_value_.hpp.

◆ m_Real [2/2]

TReal CBlast4_value_Base::m_Real

◆ m_Real_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TReal_list> CBlast4_value_Base::m_Real_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TReal_list> { ... } ::m_Real_list

Definition at line 886 of file Blast4_value_.hpp.

◆ m_Request

CRef< TRequest > CBlast4_archive_Base::m_Request
private

◆ m_Request_id [1/7]

string CBlast4_get_search_results_request_Base::m_Request_id
private

◆ m_Request_id [2/7]

string CBlast4_get_search_status_request_Base::m_Request_id
private

◆ m_Request_id [3/7]

string CBlast4_get_search_strategy_request_Base::m_Request_id
private

◆ m_Request_id [4/7]

string CBlast4_queue_search_reply_Base::m_Request_id
private

◆ m_Request_id [5/7]

string CBlast4_get_request_info_request_Base::m_Request_id
private

◆ m_Request_id [6/7]

string CBlast4_get_search_info_reply_Base::m_Request_id
private

◆ m_Request_id [7/7]

string CBlast4_get_search_info_request_Base::m_Request_id
private

◆ m_Residue_type

EBlast4_residue_type CBlast4_matrix_id_Base::m_Residue_type
private

◆ m_Result_types

int CBlast4_get_search_results_request_Base::m_Result_types
private

◆ m_Results

CRef< TResults > CBlast4_archive_Base::m_Results
private

◆ m_Search_stats

list< string > CBlast4_get_search_results_reply_Base::m_Search_stats
private

◆  [1/2]

NCBI_NS_NCBI::CUnionBuffer<TSeq_align_list> { ... } ::m_Seq_align_list

Definition at line 887 of file Blast4_value_.hpp.

◆ m_Seq_align_list [2/2]

NCBI_NS_NCBI::CUnionBuffer<TSeq_align_list> CBlast4_value_Base::m_Seq_align_list

◆  [1/2]

NCBI_NS_NCBI::CUnionBuffer<TSeq_id_list> { ... } ::m_Seq_id_list

Definition at line 888 of file Blast4_value_.hpp.

◆ m_Seq_id_list [2/2]

NCBI_NS_NCBI::CUnionBuffer<TSeq_id_list> CBlast4_value_Base::m_Seq_id_list

◆ m_Seq_ids

list< CRef< CSeq_id > > CBlast4_get_sequences_request_Base::m_Seq_ids
private

◆ m_Seq_loc_list [1/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> CBlast4_queries_Base::m_Seq_loc_list

◆  [2/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> { ... } ::m_Seq_loc_list

Definition at line 250 of file Blast4_queries_.hpp.

◆ m_Seq_loc_list [3/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> CBlast4_subject_Base::m_Seq_loc_list

◆  [4/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> { ... } ::m_Seq_loc_list

Definition at line 241 of file Blast4_subject_.hpp.

◆ m_Seq_loc_list [5/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> CBlast4_value_Base::m_Seq_loc_list

◆  [6/6]

NCBI_NS_NCBI::CUnionBuffer<TSeq_loc_list> { ... } ::m_Seq_loc_list

Definition at line 889 of file Blast4_value_.hpp.

◆ m_Seq_locations

list< CRef< CSeq_interval > > CBlast4_get_seq_parts_request_Base::m_Seq_locations
private

◆ m_Seq_locs

list< CRef< CSeq_loc > > CBlast4_phi_alignments_Base::m_Seq_locs
private

◆ m_Seqtech

int CBlast4_database_info_Base::m_Seqtech
private

◆ m_Sequences [1/2]

NCBI_NS_NCBI::CUnionBuffer<TSequences> CBlast4_subject_Base::m_Sequences

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TSequences> { ... } ::m_Sequences

Definition at line 240 of file Blast4_subject_.hpp.

◆ m_Service [1/3]

string CBlast4_queue_search_request_Base::m_Service
private

◆ m_Service [2/3]

string CBlast4_finish_params_request_Base::m_Service
private

◆ m_Service [3/3]

string CBlast4_get_request_info_reply_Base::m_Service
private

◆ m_Services

list< string > CBlast4_program_info_Base::m_Services
private

◆ m_set_State [1/45]

Uint4 CBlast4_get_search_results_reply_Base::m_set_State[1]
private

◆ m_set_State [2/45]

Uint4 CBlast4_get_search_results_request_Base::m_set_State[1]
private

◆ m_set_State [3/45]

Uint4 CBlast4_get_search_status_reply_Base::m_set_State[1]
private

◆ m_set_State [4/45]

Uint4 CBlast4_get_search_status_request_Base::m_set_State[1]
private

◆ m_set_State [5/45]

Uint4 CBlast4_get_search_strategy_request_Base::m_set_State[1]
private

◆ m_set_State [6/45]

Uint4 CBlast4_get_windowmasked_taxids_reply_Base::m_set_State[1]
private

◆ m_set_State [7/45]

Uint4 CBlast4_alignments_for_query_Base::m_set_State[1]
private

◆ m_set_State [8/45]

Uint4 CBlast4_archive_Base::m_set_State[1]
private

◆ m_set_State [9/45]

Uint4 CBlast4_database_Base::m_set_State[1]
private

◆ m_set_State [10/45]

Uint4 CBlast4_database_info_Base::m_set_State[1]
private

◆ m_set_State [11/45]

Uint4 CBlast4_error_Base::m_set_State[1]
private

◆ m_set_State [12/45]

Uint4 CBlast4_get_databases_ex_reply_Base::m_set_State[1]
private

◆ m_set_State [13/45]

Uint4 CBlast4_get_databases_reply_Base::m_set_State[1]
private

◆ m_set_State [14/45]

Uint4 CBlast4_get_matrices_reply_Base::m_set_State[1]
private

◆ m_set_State [15/45]

Uint4 CBlast4_get_parameters_reply_Base::m_set_State[1]
private

◆ m_set_State [16/45]

Uint4 CBlast4_get_paramsets_reply_Base::m_set_State[1]
private

◆ m_set_State [17/45]

Uint4 CBlast4_get_programs_reply_Base::m_set_State[1]
private

◆ m_set_State [18/45]

Uint4 CBlast4_get_queries_reply_Base::m_set_State[1]
private

◆ m_set_State [19/45]

Uint4 CBlast4_get_seq_parts_reply_Base::m_set_State[1]
private

◆ m_set_State [20/45]

Uint4 CBlast4_get_sequences_request_Base::m_set_State[1]
private

◆ m_set_State [21/45]

Uint4 CBlast4_get_sequences_reply_Base::m_set_State[1]
private

◆ m_set_State [22/45]

Uint4 CBlast4_ka_block_Base::m_set_State[1]
private

◆ m_set_State [23/45]

Uint4 CBlast4_mask_Base::m_set_State[1]
private

◆ m_set_State [24/45]

Uint4 CBlast4_matrix_id_Base::m_set_State[1]
private

◆ m_set_State [25/45]

Uint4 CBlast4_parameter_Base::m_set_State[1]
private

◆ m_set_State [26/45]

Uint4 CBlast4_parameter_info_Base::m_set_State[1]
private

◆ m_set_State [27/45]

Uint4 CBlast4_parameters_Base::m_set_State[1]
private

◆ m_set_State [28/45]

Uint4 CBlast4_phi_alignments_Base::m_set_State[1]
private

◆ m_set_State [29/45]

Uint4 CBlast4_program_info_Base::m_set_State[1]
private

◆ m_set_State [30/45]

Uint4 CBlast4_queue_search_reply_Base::m_set_State[1]
private

◆ m_set_State [31/45]

Uint4 CBlast4_queue_search_request_Base::m_set_State[1]
private

◆ m_set_State [32/45]

Uint4 CBlast4_range_Base::m_set_State[1]
private

◆ m_set_State [33/45]

Uint4 CBlast4_reply_Base::m_set_State[1]
private

◆ m_set_State [34/45]

Uint4 CBlast4_request_Base::m_set_State[1]
private

◆ m_set_State [35/45]

Uint4 CBlast4_seq_part_data_Base::m_set_State[1]
private

◆ m_set_State [36/45]

Uint4 CBlast4_simple_alignment_Base::m_set_State[1]
private

◆ m_set_State [37/45]

Uint4 CBlast4_simple_results_Base::m_set_State[1]
private

◆ m_set_State [38/45]

Uint4 CBlast4_task_info_Base::m_set_State[1]
private

◆ m_set_State [39/45]

Uint4 CBlast4_finish_params_request_Base::m_set_State[1]
private

◆ m_set_State [40/45]

Uint4 CBlast4_get_databases_ex_request_Base::m_set_State[1]
private

◆ m_set_State [41/45]

Uint4 CBlast4_get_request_info_reply_Base::m_set_State[1]
private

◆ m_set_State [42/45]

Uint4 CBlast4_get_request_info_request_Base::m_set_State[1]
private

◆ m_set_State [43/45]

Uint4 CBlast4_get_search_info_reply_Base::m_set_State[1]
private

◆ m_set_State [44/45]

Uint4 CBlast4_get_search_info_request_Base::m_set_State[1]
private

◆ m_set_State [45/45]

Uint4 CBlast4_get_seq_parts_request_Base::m_set_State[1]
private

◆ m_Simple_results

CRef< TSimple_results > CBlast4_get_search_results_reply_Base::m_Simple_results
private

◆ m_Skip_seq_data

bool CBlast4_get_sequences_request_Base::m_Skip_seq_data
private

◆ m_Start

int CBlast4_range_Base::m_Start
private

◆ m_Status

string CBlast4_get_search_status_reply_Base::m_Status
private

◆ m_Strand

int CBlast4_range_Base::m_Strand
private

◆  [1/2]

TStrand_type { ... } ::m_Strand_type

Definition at line 879 of file Blast4_value_.hpp.

◆ m_Strand_type [2/2]

TStrand_type CBlast4_value_Base::m_Strand_type

◆  [1/2]

NCBI_NS_NCBI::CUnionBuffer<TStrand_type_list> { ... } ::m_Strand_type_list

Definition at line 890 of file Blast4_value_.hpp.

◆ m_Strand_type_list [2/2]

NCBI_NS_NCBI::CUnionBuffer<TStrand_type_list> CBlast4_value_Base::m_Strand_type_list

◆ m_string [1/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CBlast4_subject_Base::m_string

◆  [2/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 242 of file Blast4_subject_.hpp.

◆  [3/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 892 of file Blast4_value_.hpp.

◆ m_string [4/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CBlast4_value_Base::m_string

◆ m_String_list [1/2]

NCBI_NS_NCBI::CUnionBuffer<TString_list> CBlast4_value_Base::m_String_list

◆  [2/2]

NCBI_NS_NCBI::CUnionBuffer<TString_list> { ... } ::m_String_list

Definition at line 891 of file Blast4_value_.hpp.

◆ m_Subject

CRef< TSubject > CBlast4_queue_search_request_Base::m_Subject
private

◆ m_Subject_id

string CBlast4_simple_alignment_Base::m_Subject_id
private

◆ m_Subjects

CRef< TSubjects > CBlast4_get_request_info_reply_Base::m_Subjects
private

◆ m_Target_only

bool CBlast4_get_sequences_request_Base::m_Target_only
private

◆ m_Taxid

int CBlast4_database_info_Base::m_Taxid
private

◆ m_Total_length

Int8 CBlast4_database_info_Base::m_Total_length
private

◆ m_Type [1/2]

EBlast4_residue_type CBlast4_database_Base::m_Type
private

◆ m_Type [2/2]

string CBlast4_parameter_info_Base::m_Type
private

◆ m_Value

CRef< TValue > CBlast4_parameter_Base::m_Value
private

◆ sm_SelectionNames [1/6]

const char *const CBlast4_cutoff_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"e-value",
"raw-score"
}

Definition at line 249 of file Blast4_cutoff_.hpp.

Referenced by CBlast4_cutoff_Base::SelectionName(), and CBlast4_cutoff_Base::ThrowInvalidSelection().

◆ sm_SelectionNames [2/6]

const char *const CBlast4_queries_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"pssm",
"seq-loc-list",
"bioseq-set"
}

Definition at line 247 of file Blast4_queries_.hpp.

Referenced by CBlast4_queries_Base::SelectionName(), and CBlast4_queries_Base::ThrowInvalidSelection().

◆ sm_SelectionNames [3/6]

const char *const CBlast4_reply_body_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"finish-params",
"get-databases",
"get-matrices",
"get-parameters",
"get-paramsets",
"get-programs",
"get-search-results",
"get-sequences",
"queue-search",
"get-queries",
"get-request-info",
"get-sequence-parts",
"get-windowmasked-taxids",
"get-protocol-info",
"get-search-info",
"get-databases-ex"
}

Definition at line 619 of file Blast4_reply_body_.hpp.

Referenced by CBlast4_reply_body_Base::SelectionName(), and CBlast4_reply_body_Base::ThrowInvalidSelection().

◆ sm_SelectionNames [4/6]

const char *const CBlast4_request_body_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"finish-params",
"get-databases",
"get-matrices",
"get-parameters",
"get-paramsets",
"get-programs",
"get-search-results",
"get-sequences",
"queue-search",
"get-request-info",
"get-sequence-parts",
"get-windowmasked-taxids",
"get-protocol-info",
"get-search-info",
"get-databases-ex"
}

Definition at line 488 of file Blast4_request_body_.hpp.

Referenced by CBlast4_request_body_Base::SelectionName(), and CBlast4_request_body_Base::ThrowInvalidSelection().

◆ sm_SelectionNames [5/6]

const char *const CBlast4_subject_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"database",
"sequences",
"seq-loc-list"
}

Definition at line 237 of file Blast4_subject_.hpp.

Referenced by CBlast4_subject_Base::SelectionName(), and CBlast4_subject_Base::ThrowInvalidSelection().

◆ sm_SelectionNames [6/6]

const char *const CBlast4_value_Base::sm_SelectionNames
staticprivate
Initial value:
= {
"not set",
"big-integer",
"bioseq",
"boolean",
"cutoff",
"integer",
"matrix",
"real",
"seq-align",
"seq-id",
"seq-loc",
"strand-type",
"string",
"big-integer-list",
"bioseq-list",
"boolean-list",
"cutoff-list",
"integer-list",
"matrix-list",
"real-list",
"seq-align-list",
"seq-id-list",
"seq-loc-list",
"strand-type-list",
"string-list",
"bioseq-set",
"seq-align-set",
"query-mask"
}

Definition at line 872 of file Blast4_value_.hpp.

Referenced by CBlast4_value_Base::SelectionName(), and CBlast4_value_Base::ThrowInvalidSelection().

Modified on Wed Mar 27 11:20:13 2024 by modify_doxy.py rev. 669887