Code generated by DATATOOL from 'cdd.asn' (module 'NCBI-Cdd')

Collaboration diagram for Code generated by DATATOOL from 'cdd.asn' (module 'NCBI-Cdd'):

Classes
class	CAlgorithm_type
	CAlgorithm_type –. More...
class	CAlgorithm_type_Base
	CAlgorithm_type_Base –. More...
class	CAlign_annot
	CAlign_annot –. More...
class	CAlign_annot_Base
	CAlign_annot_Base –. More...
class	CAlign_annot_set
	CAlign_annot_set –. More...
class	CAlign_annot_set_Base
	CAlign_annot_set_Base –. More...
class	CCdd_Base
	the Cdd is the basic ASN.1 object storing an annotated and curated set of alignments (formulated as a set of pairwise master-slave alignments). More...
class	CCdd_book_ref
	CCdd_book_ref –. More...
class	CCdd_book_ref_Base
	record a link to Entrez Books More...
class	CCdd_descr
	CCdd_descr –. More...
class	CCdd_descr_Base
	The description of CDD's refers to the specific set of aligned sequences, the region that is being aligned and the information contained in the alignment. More...
class	CCdd_descr_set
	CCdd_descr_set –. More...
class	CCdd_descr_set_Base
	CCdd_descr_set_Base –. More...
class	CCdd_id
	CCdd_id –. More...
class	CCdd_id_Base
	CCdd_id_Base –. More...
class	CCdd_id_set
	CCdd_id_set –. More...
class	CCdd_id_set_Base
	CCdd_id_set_Base –. More...
class	CCdd_org_ref
	CCdd_org_ref –. More...
class	CCdd_org_ref_Base
	dealing with lists of preferred tax-nodes More...
class	CCdd_org_ref_set
	CCdd_org_ref_set –. More...
class	CCdd_org_ref_set_Base
	CCdd_org_ref_set_Base –. More...
class	CCdd_pref_node_descr
	CCdd_pref_node_descr –. More...
class	CCdd_pref_node_descr_Base
	CCdd_pref_node_descr_Base –. More...
class	CCdd_pref_node_descr_set
	CCdd_pref_node_descr_set –. More...
class	CCdd_pref_node_descr_set_Base
	CCdd_pref_node_descr_set_Base –. More...
class	CCdd_pref_nodes
	CCdd_pref_nodes –. More...
class	CCdd_pref_nodes_Base
	CCdd_pref_nodes_Base –. More...
class	CCdd_Project
	CCdd_Project –. More...
class	CCdd_Project_Base
	cd colors are as: 0000FF for red, 00FF00 for green, FF0000 for blue More...
class	CCdd_repeat
	CCdd_repeat –. More...
class	CCdd_repeat_Base
	record whether the CD contains repeated sequence/structure motifs More...
class	CCdd_Script
	CCdd_Script –. More...
class	CCdd_Script_Base
	CCdd_Script_Base –. More...
class	CCdd_set
	CCdd_set –. More...
class	CCdd_set_Base
	CCdd_set_Base –. More...
class	CCdd_tree
	CCdd_tree –. More...
class	CCdd_tree_Base
	the Cdd-tree stores the hierarchy of CDDs. More...
class	CCdd_tree_set
	CCdd_tree_set –. More...
class	CCdd_tree_set_Base
	CCdd_tree_set_Base –. More...
class	CCdd_Viewer
	CCdd_Viewer –. More...
class	CCdd_Viewer_Base
	CCdd_Viewer_Base –. More...
class	CCdd_Viewer_Rect
	CCdd_Viewer_Rect –. More...
class	CCdd_Viewer_Rect_Base
	Cdd projects store a set of CDs, typically related to each other relationships would be specified using the ancestors fields in the individual CD objects. More...
class	CDomain_parent
	CDomain_parent –. More...
class	CDomain_parent_Base
	the Domain-parent records an evolutionary relationship which may not be as simple as a classical parent-child relationship in a typical hierarchy, i.e. More...
class	CFeature_evidence
	CFeature_evidence –. More...
class	CFeature_evidence_Base
	CFeature_evidence_Base –. More...
class	CGlobal_id
	CGlobal_id –. More...
class	CGlobal_id_Base
	Cdd's should not exist without a unique accession, but alternative id's may be present as well. More...
class	CMatrix
	CMatrix –. More...
class	CMatrix_Base
	Matrix definitions, these are supposed to store PSSMs and corresponding matrices of relative residue frequencies. More...
class	CNode_annotation
	CNode_annotation –. More...
class	CNode_annotation_Base
	CNode_annotation_Base –. More...
class	CReject_id
	CReject_id –. More...
class	CReject_id_Base
	CReject_id_Base –. More...
class	CSeqTree_node
	CSeqTree_node –. More...
class	CSeqTree_node_Base
	CSeqTree_node_Base –. More...
class	CSeqTree_node_Base::C_Children
	C_Children –. More...
class	CSeqTree_node_Base::C_Children::C_Footprint
	C_Footprint –. More...
class	CSequence_tree
	CSequence_tree –. More...
class	CSequence_tree_Base
	record sequence trees generated by a suitable algorithm. More...
class	CTriangle
	CTriangle –. More...
class	CTriangle_Base
	definition for matrix of pairwise "distances", stored as the upper triangle of a squared n x n matrix (excluding the diagonal), this is supposed to store pairwise percentages of identical residues, pairwise alignment scores or E-values from pairwise BLAST sequence comparisons More...
class	CUpdate_align
	CUpdate_align –. More...
class	CUpdate_align_Base
	Both fields are optional, as the Update-align may be a Seq-annot without description, or a suggestion to add a sequence without the corresponding alignment. More...
class	CUpdate_comment
	CUpdate_comment –. More...
class	CUpdate_comment_Base
	Update-align is supposed to contain alignments that still need some work done to fit into the CD-proper alignment. More...

Typedefs
typedef CAlgorithm_type_Base	CAlgorithm_type::Tparent
typedef CSerialObject	CAlgorithm_type_Base::Tparent
typedef int	CAlgorithm_type_Base::TScoring_Scheme
typedef int	CAlgorithm_type_Base::TClustering_Method
typedef int	CAlgorithm_type_Base::TScore_Matrix
typedef int	CAlgorithm_type_Base::TGapOpen
typedef int	CAlgorithm_type_Base::TGapExtend
typedef int	CAlgorithm_type_Base::TGapScaleFactor
typedef int	CAlgorithm_type_Base::TNTerminalExt
typedef int	CAlgorithm_type_Base::TCTerminalExt
typedef int	CAlgorithm_type_Base::TTree_scope
typedef int	CAlgorithm_type_Base::TColoring_scope
typedef Tparent::CMemberIndex< E_memberIndex, 11 >	CAlgorithm_type_Base::TmemberIndex
typedef CAlign_annot_Base	CAlign_annot::Tparent
typedef CSerialObject	CAlign_annot_Base::Tparent
typedef CSeq_loc	CAlign_annot_Base::TLocation
typedef string	CAlign_annot_Base::TDescription
typedef list< CRef< CFeature_evidence > >	CAlign_annot_Base::TEvidence
typedef int	CAlign_annot_Base::TType
typedef list< string >	CAlign_annot_Base::TAliases
typedef string	CAlign_annot_Base::TMotif
typedef int	CAlign_annot_Base::TMotifuse
typedef Tparent::CMemberIndex< E_memberIndex, 8 >	CAlign_annot_Base::TmemberIndex
typedef CAlign_annot_set_Base	CAlign_annot_set::Tparent
typedef CSerialObject	CAlign_annot_set_Base::Tparent
typedef list< CRef< CAlign_annot > >	CAlign_annot_set_Base::Tdata
typedef CSerialObject	CCdd_Base::Tparent
typedef string	CCdd_Base::TName
typedef CCdd_id_set	CCdd_Base::TId
typedef CCdd_descr_set	CCdd_Base::TDescription
typedef list< CRef< CSeq_annot > >	CCdd_Base::TSeqannot
typedef CBiostruc_annot_set	CCdd_Base::TFeatures
typedef CSeq_entry	CCdd_Base::TSequences
typedef CSeq_interval	CCdd_Base::TProfile_range
typedef CBioseq	CCdd_Base::TTrunc_master
typedef CMatrix	CCdd_Base::TPosfreq
typedef CMatrix	CCdd_Base::TScoremat
typedef CTriangle	CCdd_Base::TDistance
typedef CCdd_id	CCdd_Base::TParent
typedef CCdd_id_set	CCdd_Base::TChildren
typedef CCdd_id_set	CCdd_Base::TSiblings
typedef CCdd_id_set	CCdd_Base::TNeighbors
typedef list< CRef< CUpdate_align > >	CCdd_Base::TPending
typedef list< CRef< CReject_id > >	CCdd_Base::TRejects
typedef list< CRef< CSeq_id > >	CCdd_Base::TMaster3d
typedef CAlign_annot_set	CCdd_Base::TAlignannot
typedef CCn3d_style_dictionary	CCdd_Base::TStyle_dictionary
typedef CCn3d_user_annotations	CCdd_Base::TUser_annotations
typedef list< CRef< CDomain_parent > >	CCdd_Base::TAncestors
typedef CPssmWithParameters	CCdd_Base::TScoreparams
typedef CSequence_tree	CCdd_Base::TSeqtree
typedef Tparent::CMemberIndex< E_memberIndex, 25 >	CCdd_Base::TmemberIndex
typedef CCdd_book_ref_Base	CCdd_book_ref::Tparent
typedef CSerialObject	CCdd_book_ref_Base::Tparent
typedef string	CCdd_book_ref_Base::TBookname
typedef ETextelement	CCdd_book_ref_Base::TTextelement
typedef int	CCdd_book_ref_Base::TElementid
typedef int	CCdd_book_ref_Base::TSubelementid
typedef string	CCdd_book_ref_Base::TCelementid
typedef string	CCdd_book_ref_Base::TCsubelementid
typedef Tparent::CMemberIndex< E_memberIndex, 7 >	CCdd_book_ref_Base::TmemberIndex
typedef CCdd_descr_Base	CCdd_descr::Tparent
typedef CSerialObject	CCdd_descr_Base::Tparent
typedef string	CCdd_descr_Base::TOthername
typedef string	CCdd_descr_Base::TCategory
typedef string	CCdd_descr_Base::TComment
typedef CPub	CCdd_descr_Base::TReference
typedef CDate	CCdd_descr_Base::TCreate_date
typedef COrg_ref	CCdd_descr_Base::TTax_source
typedef string	CCdd_descr_Base::TSource
typedef int	CCdd_descr_Base::TStatus
typedef CDate	CCdd_descr_Base::TUpdate_date
typedef list< string >	CCdd_descr_Base::TScrapbook
typedef CCdd_id_set	CCdd_descr_Base::TSource_id
typedef CCdd_repeat	CCdd_descr_Base::TRepeats
typedef CCdd_id_set	CCdd_descr_Base::TOld_root
typedef int	CCdd_descr_Base::TCuration_status
typedef int	CCdd_descr_Base::TReadonly_status
typedef CCdd_book_ref	CCdd_descr_Base::TBook_ref
typedef CPub	CCdd_descr_Base::TAttribution
typedef string	CCdd_descr_Base::TTitle
typedef CCdd_descr_set_Base	CCdd_descr_set::Tparent
typedef CSerialObject	CCdd_descr_set_Base::Tparent
typedef list< CRef< CCdd_descr > >	CCdd_descr_set_Base::Tdata
typedef CCdd_id_Base	CCdd_id::Tparent
typedef CSerialObject	CCdd_id_Base::Tparent
typedef int	CCdd_id_Base::TUid
typedef CGlobal_id	CCdd_id_Base::TGid
typedef CCdd_id_set_Base	CCdd_id_set::Tparent
typedef CSerialObject	CCdd_id_set_Base::Tparent
typedef list< CRef< CCdd_id > >	CCdd_id_set_Base::Tdata
typedef CCdd_org_ref_Base	CCdd_org_ref::Tparent
typedef CSerialObject	CCdd_org_ref_Base::Tparent
typedef COrg_ref	CCdd_org_ref_Base::TReference
typedef bool	CCdd_org_ref_Base::TActive
typedef int	CCdd_org_ref_Base::TParent_tax_id
typedef string	CCdd_org_ref_Base::TRank
typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CCdd_org_ref_Base::TmemberIndex
typedef CCdd_org_ref_set_Base	CCdd_org_ref_set::Tparent
typedef CSerialObject	CCdd_org_ref_set_Base::Tparent
typedef list< CRef< CCdd_org_ref > >	CCdd_org_ref_set_Base::Tdata
typedef CCdd_pref_node_descr_Base	CCdd_pref_node_descr::Tparent
typedef CSerialObject	CCdd_pref_node_descr_Base::Tparent
typedef CDate	CCdd_pref_node_descr_Base::TCreate_date
typedef string	CCdd_pref_node_descr_Base::TDescription
typedef CCdd_pref_node_descr_set_Base	CCdd_pref_node_descr_set::Tparent
typedef CSerialObject	CCdd_pref_node_descr_set_Base::Tparent
typedef list< CRef< CCdd_pref_node_descr > >	CCdd_pref_node_descr_set_Base::Tdata
typedef CCdd_pref_nodes_Base	CCdd_pref_nodes::Tparent
typedef CSerialObject	CCdd_pref_nodes_Base::Tparent
typedef CCdd_org_ref_set	CCdd_pref_nodes_Base::TPreferred_nodes
typedef CCdd_org_ref_set	CCdd_pref_nodes_Base::TModel_organisms
typedef CCdd_org_ref_set	CCdd_pref_nodes_Base::TOptional_nodes
typedef CCdd_pref_node_descr_set	CCdd_pref_nodes_Base::TDescription
typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CCdd_pref_nodes_Base::TmemberIndex
typedef CCdd_Project_Base	CCdd_Project::Tparent
typedef CSerialObject	CCdd_Project_Base::Tparent
typedef list< CRef< CCdd > >	CCdd_Project_Base::TCds
typedef list< int >	CCdd_Project_Base::TCdcolor
typedef list< CRef< CCdd_Viewer > >	CCdd_Project_Base::TViewers
typedef string	CCdd_Project_Base::TLog
typedef list< CRef< CCdd_Script > >	CCdd_Project_Base::TScripts
typedef CCdd_id_set	CCdd_Project_Base::TId
typedef list< string >	CCdd_Project_Base::TRids
typedef CDate	CCdd_Project_Base::TCreate_date
typedef CDate	CCdd_Project_Base::TUpdate_date
typedef int	CCdd_Project_Base::TProject_id
typedef Tparent::CMemberIndex< E_memberIndex, 11 >	CCdd_Project_Base::TmemberIndex
typedef CCdd_repeat_Base	CCdd_repeat::Tparent
typedef CSerialObject	CCdd_repeat_Base::Tparent
typedef int	CCdd_repeat_Base::TCount
typedef CSeq_loc	CCdd_repeat_Base::TLocation
typedef int	CCdd_repeat_Base::TAvglen
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CCdd_repeat_Base::TmemberIndex
typedef CCdd_Script_Base	CCdd_Script::Tparent
typedef CSerialObject	CCdd_Script_Base::Tparent
typedef int	CCdd_Script_Base::TType
typedef string	CCdd_Script_Base::TName
typedef string	CCdd_Script_Base::TCommands
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CCdd_Script_Base::TmemberIndex
typedef CCdd_set_Base	CCdd_set::Tparent
typedef CSerialObject	CCdd_set_Base::Tparent
typedef list< CRef< CCdd > >	CCdd_set_Base::Tdata
typedef CCdd_tree_Base	CCdd_tree::Tparent
typedef CSerialObject	CCdd_tree_Base::Tparent
typedef string	CCdd_tree_Base::TName
typedef CCdd_id_set	CCdd_tree_Base::TId
typedef CCdd_descr_set	CCdd_tree_Base::TDescription
typedef CCdd_id	CCdd_tree_Base::TParent
typedef CCdd_id_set	CCdd_tree_Base::TChildren
typedef CCdd_id_set	CCdd_tree_Base::TSiblings
typedef CCdd_id_set	CCdd_tree_Base::TNeighbors
typedef Tparent::CMemberIndex< E_memberIndex, 8 >	CCdd_tree_Base::TmemberIndex
typedef CCdd_tree_set_Base	CCdd_tree_set::Tparent
typedef CSerialObject	CCdd_tree_set_Base::Tparent
typedef list< CRef< CCdd_tree > >	CCdd_tree_set_Base::Tdata
typedef CCdd_Viewer_Base	CCdd_Viewer::Tparent
typedef CSerialObject	CCdd_Viewer_Base::Tparent
typedef int	CCdd_Viewer_Base::TCtrl
typedef CCdd_Viewer_Rect	CCdd_Viewer_Base::TRect
typedef list< string >	CCdd_Viewer_Base::TAccessions
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CCdd_Viewer_Base::TmemberIndex
typedef CCdd_Viewer_Rect_Base	CCdd_Viewer_Rect::Tparent
typedef CSerialObject	CCdd_Viewer_Rect_Base::Tparent
typedef int	CCdd_Viewer_Rect_Base::TTop
typedef int	CCdd_Viewer_Rect_Base::TLeft
typedef int	CCdd_Viewer_Rect_Base::TWidth
typedef int	CCdd_Viewer_Rect_Base::THeight
typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CCdd_Viewer_Rect_Base::TmemberIndex
typedef CDomain_parent_Base	CDomain_parent::Tparent
typedef CSerialObject	CDomain_parent_Base::Tparent
typedef int	CDomain_parent_Base::TParent_type
typedef CCdd_id	CDomain_parent_Base::TParentid
typedef CSeq_annot	CDomain_parent_Base::TSeqannot
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CDomain_parent_Base::TmemberIndex
typedef CFeature_evidence_Base	CFeature_evidence::Tparent
typedef CSerialObject	CFeature_evidence_Base::Tparent
typedef string	CFeature_evidence_Base::TComment
typedef CPub	CFeature_evidence_Base::TReference
typedef CBiostruc_annot_set	CFeature_evidence_Base::TBsannot
typedef CSeq_feat	CFeature_evidence_Base::TSeqfeat
typedef CCdd_book_ref	CFeature_evidence_Base::TBook_ref
typedef CGlobal_id_Base	CGlobal_id::Tparent
typedef CSerialObject	CGlobal_id_Base::Tparent
typedef string	CGlobal_id_Base::TAccession
typedef string	CGlobal_id_Base::TRelease
typedef int	CGlobal_id_Base::TVersion
typedef string	CGlobal_id_Base::TDatabase
typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CGlobal_id_Base::TmemberIndex
typedef CMatrix_Base	CMatrix::Tparent
typedef CSerialObject	CMatrix_Base::Tparent
typedef int	CMatrix_Base::TNcolumns
typedef int	CMatrix_Base::TNrows
typedef list< string >	CMatrix_Base::TRow_labels
typedef int	CMatrix_Base::TScale_factor
typedef list< int >	CMatrix_Base::TColumns
typedef Tparent::CMemberIndex< E_memberIndex, 6 >	CMatrix_Base::TmemberIndex
typedef CNode_annotation_Base	CNode_annotation::Tparent
typedef CSerialObject	CNode_annotation_Base::Tparent
typedef string	CNode_annotation_Base::TPresentInChildCD
typedef string	CNode_annotation_Base::TNote
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNode_annotation_Base::TmemberIndex
typedef CReject_id_Base	CReject_id::Tparent
typedef CSerialObject	CReject_id_Base::Tparent
typedef list< CRef< CUpdate_comment > >	CReject_id_Base::TDescription
typedef list< CRef< CSeq_id > >	CReject_id_Base::TIds
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CReject_id_Base::TmemberIndex
typedef CSeqTree_node_Base	CSeqTree_node::Tparent
typedef CSerialObject	CSeqTree_node_Base::Tparent
typedef CSerialObject	CSeqTree_node_Base::C_Children::Tparent
typedef CSerialObject	CSeqTree_node_Base::C_Children::C_Footprint::Tparent
typedef CSeq_interval	CSeqTree_node_Base::C_Children::C_Footprint::TSeqRange
typedef int	CSeqTree_node_Base::C_Children::C_Footprint::TRowId
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CSeqTree_node_Base::C_Children::C_Footprint::TmemberIndex
typedef list< CRef< CSeqTree_node > >	CSeqTree_node_Base::C_Children::TChildren
typedef C_Footprint	CSeqTree_node_Base::C_Children::TFootprint
typedef bool	CSeqTree_node_Base::TIsAnnotated
typedef string	CSeqTree_node_Base::TName
typedef double	CSeqTree_node_Base::TDistance
typedef C_Children	CSeqTree_node_Base::TChildren
typedef CNode_annotation	CSeqTree_node_Base::TAnnotation
typedef Tparent::CMemberIndex< E_memberIndex, 6 >	CSeqTree_node_Base::TmemberIndex
typedef CSequence_tree_Base	CSequence_tree::Tparent
typedef CSerialObject	CSequence_tree_Base::Tparent
typedef string	CSequence_tree_Base::TCdAccession
typedef CAlgorithm_type	CSequence_tree_Base::TAlgorithm
typedef bool	CSequence_tree_Base::TIsAnnotated
typedef CSeqTree_node	CSequence_tree_Base::TRoot
typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CSequence_tree_Base::TmemberIndex
typedef CTriangle_Base	CTriangle::Tparent
typedef CSerialObject	CTriangle_Base::Tparent
typedef int	CTriangle_Base::TNelements
typedef CScore_set	CTriangle_Base::TScores
typedef list< int >	CTriangle_Base::TDiv_ranks
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CTriangle_Base::TmemberIndex
typedef CUpdate_align_Base	CUpdate_align::Tparent
typedef CSerialObject	CUpdate_align_Base::Tparent
typedef list< CRef< CUpdate_comment > >	CUpdate_align_Base::TDescription
typedef CSeq_annot	CUpdate_align_Base::TSeqannot
typedef int	CUpdate_align_Base::TType
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CUpdate_align_Base::TmemberIndex
typedef CUpdate_comment_Base	CUpdate_comment::Tparent
typedef CSerialObject	CUpdate_comment_Base::Tparent
typedef string	CUpdate_comment_Base::TComment
typedef CSeq_loc	CUpdate_comment_Base::TAddthis
typedef CSeq_loc	CUpdate_comment_Base::TReplaces
typedef CSeq_loc	CUpdate_comment_Base::TReject_loc
typedef CPub	CUpdate_comment_Base::TReference

Enumerations
enum	CAlgorithm_type_Base::EScoring_Scheme {   CAlgorithm_type_Base::eScoring_Scheme_unassigned = 0 , CAlgorithm_type_Base::eScoring_Scheme_percent_id = 1 , CAlgorithm_type_Base::eScoring_Scheme_kimura_corrected = 2 , CAlgorithm_type_Base::eScoring_Scheme_aligned_score = 3 ,   CAlgorithm_type_Base::eScoring_Scheme_aligned_score_ext = 4 , CAlgorithm_type_Base::eScoring_Scheme_aligned_score_filled = 5 , CAlgorithm_type_Base::eScoring_Scheme_blast_footprint = 6 , CAlgorithm_type_Base::eScoring_Scheme_blast_full = 7 ,   CAlgorithm_type_Base::eScoring_Scheme_hybrid_aligned_score = 8 , CAlgorithm_type_Base::eScoring_Scheme_other = 255 }
enum	CAlgorithm_type_Base::EClustering_Method {   CAlgorithm_type_Base::eClustering_Method_unassigned = 0 , CAlgorithm_type_Base::eClustering_Method_single_linkage = 1 , CAlgorithm_type_Base::eClustering_Method_neighbor_joining = 2 , CAlgorithm_type_Base::eClustering_Method_fast_minimum_evolution = 3 ,   CAlgorithm_type_Base::eClustering_Method_other = 255 }
enum	CAlgorithm_type_Base::EScore_Matrix {   CAlgorithm_type_Base::eScore_Matrix_unassigned = 0 , CAlgorithm_type_Base::eScore_Matrix_blosum45 = 1 , CAlgorithm_type_Base::eScore_Matrix_blosum62 = 2 , CAlgorithm_type_Base::eScore_Matrix_blosum80 = 3 ,   CAlgorithm_type_Base::eScore_Matrix_pam30 = 4 , CAlgorithm_type_Base::eScore_Matrix_pam70 = 5 , CAlgorithm_type_Base::eScore_Matrix_pam250 = 6 , CAlgorithm_type_Base::eScore_Matrix_other = 255 }
enum	CAlgorithm_type_Base::ETree_scope { CAlgorithm_type_Base::eTree_scope_allDescendants = 0 , CAlgorithm_type_Base::eTree_scope_immediateChildrenOnly = 1 , CAlgorithm_type_Base::eTree_scope_selfOnly = 2 , CAlgorithm_type_Base::eTree_scope_other = 255 }
enum	CAlgorithm_type_Base::EColoring_scope { CAlgorithm_type_Base::eColoring_scope_allDescendants = 0 , CAlgorithm_type_Base::eColoring_scope_immediateChildrenOnly = 1 , CAlgorithm_type_Base::eColoring_scope_other = 255 }
enum class	CAlgorithm_type_Base::E_memberIndex {   CAlgorithm_type_Base::e__allMandatory = 0 , CAlgorithm_type_Base::e_scoring_Scheme , CAlgorithm_type_Base::e_clustering_Method , CAlgorithm_type_Base::e_score_Matrix ,   CAlgorithm_type_Base::e_gapOpen , CAlgorithm_type_Base::e_gapExtend , CAlgorithm_type_Base::e_gapScaleFactor , CAlgorithm_type_Base::e_nTerminalExt ,   CAlgorithm_type_Base::e_cTerminalExt , CAlgorithm_type_Base::e_tree_scope , CAlgorithm_type_Base::e_coloring_scope }
enum class	CAlign_annot_Base::E_memberIndex {   CAlign_annot_Base::e__allMandatory = 0 , CAlign_annot_Base::e_location , CAlign_annot_Base::e_description , CAlign_annot_Base::e_evidence ,   CAlign_annot_Base::e_type , CAlign_annot_Base::e_aliases , CAlign_annot_Base::e_motif , CAlign_annot_Base::e_motifuse }
enum class	CCdd_Base::E_memberIndex {   CCdd_Base::e__allMandatory = 0 , CCdd_Base::e_name , CCdd_Base::e_id , CCdd_Base::e_description ,   CCdd_Base::e_seqannot , CCdd_Base::e_features , CCdd_Base::e_sequences , CCdd_Base::e_profile_range ,   CCdd_Base::e_trunc_master , CCdd_Base::e_posfreq , CCdd_Base::e_scoremat , CCdd_Base::e_distance ,   CCdd_Base::e_parent , CCdd_Base::e_children , CCdd_Base::e_siblings , CCdd_Base::e_neighbors ,   CCdd_Base::e_pending , CCdd_Base::e_rejects , CCdd_Base::e_master3d , CCdd_Base::e_alignannot ,   CCdd_Base::e_style_dictionary , CCdd_Base::e_user_annotations , CCdd_Base::e_ancestors , CCdd_Base::e_scoreparams ,   CCdd_Base::e_seqtree }
enum	CCdd_book_ref_Base::ETextelement {   CCdd_book_ref_Base::eTextelement_unassigned = 0 , CCdd_book_ref_Base::eTextelement_section = 1 , CCdd_book_ref_Base::eTextelement_figgrp = 2 , CCdd_book_ref_Base::eTextelement_table = 3 ,   CCdd_book_ref_Base::eTextelement_chapter = 4 , CCdd_book_ref_Base::eTextelement_biblist = 5 , CCdd_book_ref_Base::eTextelement_box = 6 , CCdd_book_ref_Base::eTextelement_glossary = 7 ,   CCdd_book_ref_Base::eTextelement_appendix = 8 , CCdd_book_ref_Base::eTextelement_other = 255 }
enum class	CCdd_book_ref_Base::E_memberIndex {   CCdd_book_ref_Base::e__allMandatory = 0 , CCdd_book_ref_Base::e_bookname , CCdd_book_ref_Base::e_textelement , CCdd_book_ref_Base::e_elementid ,   CCdd_book_ref_Base::e_subelementid , CCdd_book_ref_Base::e_celementid , CCdd_book_ref_Base::e_csubelementid }
enum	CCdd_descr_Base::EStatus {   CCdd_descr_Base::eStatus_unassigned = 0 , CCdd_descr_Base::eStatus_finished_ok = 1 , CCdd_descr_Base::eStatus_pending_release = 2 , CCdd_descr_Base::eStatus_other_asis = 3 ,   CCdd_descr_Base::eStatus_matrix_only = 4 , CCdd_descr_Base::eStatus_update_running = 5 , CCdd_descr_Base::eStatus_auto_updated = 6 , CCdd_descr_Base::eStatus_claimed = 7 ,   CCdd_descr_Base::eStatus_curated_complete = 8 , CCdd_descr_Base::eStatus_other = 255 }
enum	CCdd_descr_Base::ECuration_status {   CCdd_descr_Base::eCuration_status_unassigned = 0 , CCdd_descr_Base::eCuration_status_prein = 1 , CCdd_descr_Base::eCuration_status_ofc = 2 , CCdd_descr_Base::eCuration_status_iac = 3 ,   CCdd_descr_Base::eCuration_status_ofv1 = 4 , CCdd_descr_Base::eCuration_status_iav1 = 5 , CCdd_descr_Base::eCuration_status_ofv2 = 6 , CCdd_descr_Base::eCuration_status_iav2 = 7 ,   CCdd_descr_Base::eCuration_status_postin = 8 , CCdd_descr_Base::eCuration_status_other = 255 }
enum	CCdd_descr_Base::EReadonly_status { CCdd_descr_Base::eReadonly_status_unassigned = 0 , CCdd_descr_Base::eReadonly_status_readonly = 1 , CCdd_descr_Base::eReadonly_status_readwrite = 2 , CCdd_descr_Base::eReadonly_status_other = 255 }
enum	CCdd_descr_Base::E_Choice {   CCdd_descr_Base::e_not_set = 0 , CCdd_descr_Base::e_Othername , CCdd_descr_Base::e_Category , CCdd_descr_Base::e_Comment ,   CCdd_descr_Base::e_Reference , CCdd_descr_Base::e_Create_date , CCdd_descr_Base::e_Tax_source , CCdd_descr_Base::e_Source ,   CCdd_descr_Base::e_Status , CCdd_descr_Base::e_Update_date , CCdd_descr_Base::e_Scrapbook , CCdd_descr_Base::e_Source_id ,   CCdd_descr_Base::e_Repeats , CCdd_descr_Base::e_Old_root , CCdd_descr_Base::e_Curation_status , CCdd_descr_Base::e_Readonly_status ,   CCdd_descr_Base::e_Book_ref , CCdd_descr_Base::e_Attribution , CCdd_descr_Base::e_Title }
	Choice variants. More...
enum	CCdd_descr_Base::E_ChoiceStopper { CCdd_descr_Base::e_MaxChoice = 19 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CCdd_id_Base::E_Choice { CCdd_id_Base::e_not_set = 0 , CCdd_id_Base::e_Uid , CCdd_id_Base::e_Gid }
	Choice variants. More...
enum	CCdd_id_Base::E_ChoiceStopper { CCdd_id_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CCdd_org_ref_Base::E_memberIndex {   CCdd_org_ref_Base::e__allMandatory = 0 , CCdd_org_ref_Base::e_reference , CCdd_org_ref_Base::e_active , CCdd_org_ref_Base::e_parent_tax_id ,   CCdd_org_ref_Base::e_rank }
enum	CCdd_pref_node_descr_Base::E_Choice { CCdd_pref_node_descr_Base::e_not_set = 0 , CCdd_pref_node_descr_Base::e_Create_date , CCdd_pref_node_descr_Base::e_Description }
	Choice variants. More...
enum	CCdd_pref_node_descr_Base::E_ChoiceStopper { CCdd_pref_node_descr_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CCdd_pref_nodes_Base::E_memberIndex {   CCdd_pref_nodes_Base::e__allMandatory = 0 , CCdd_pref_nodes_Base::e_preferred_nodes , CCdd_pref_nodes_Base::e_model_organisms , CCdd_pref_nodes_Base::e_optional_nodes ,   CCdd_pref_nodes_Base::e_description }
enum class	CCdd_Project_Base::E_memberIndex {   CCdd_Project_Base::e__allMandatory = 0 , CCdd_Project_Base::e_cds , CCdd_Project_Base::e_cdcolor , CCdd_Project_Base::e_viewers ,   CCdd_Project_Base::e_log , CCdd_Project_Base::e_scripts , CCdd_Project_Base::e_id , CCdd_Project_Base::e_rids ,   CCdd_Project_Base::e_create_date , CCdd_Project_Base::e_update_date , CCdd_Project_Base::e_project_id }
enum class	CCdd_repeat_Base::E_memberIndex { CCdd_repeat_Base::e__allMandatory = 0 , CCdd_repeat_Base::e_count , CCdd_repeat_Base::e_location , CCdd_repeat_Base::e_avglen }
enum	CCdd_Script_Base::EType { CCdd_Script_Base::eType_unassigned = 0 , CCdd_Script_Base::eType_user_recorded = 1 , CCdd_Script_Base::eType_server_generated = 2 , CCdd_Script_Base::eType_other = 255 }
enum class	CCdd_Script_Base::E_memberIndex { CCdd_Script_Base::e__allMandatory = 0 , CCdd_Script_Base::e_type , CCdd_Script_Base::e_name , CCdd_Script_Base::e_commands }
enum class	CCdd_tree_Base::E_memberIndex {   CCdd_tree_Base::e__allMandatory = 0 , CCdd_tree_Base::e_name , CCdd_tree_Base::e_id , CCdd_tree_Base::e_description ,   CCdd_tree_Base::e_parent , CCdd_tree_Base::e_children , CCdd_tree_Base::e_siblings , CCdd_tree_Base::e_neighbors }
enum	CCdd_Viewer_Base::ECtrl {   CCdd_Viewer_Base::eCtrl_unassigned = 0 , CCdd_Viewer_Base::eCtrl_cd_info = 1 , CCdd_Viewer_Base::eCtrl_align_annot = 2 , CCdd_Viewer_Base::eCtrl_seq_list = 3 ,   CCdd_Viewer_Base::eCtrl_seq_tree = 4 , CCdd_Viewer_Base::eCtrl_merge_preview = 5 , CCdd_Viewer_Base::eCtrl_cross_hits = 6 , CCdd_Viewer_Base::eCtrl_notes = 7 ,   CCdd_Viewer_Base::eCtrl_tax_tree = 8 , CCdd_Viewer_Base::eCtrl_dart = 9 , CCdd_Viewer_Base::eCtrl_dart_selected_rows = 10 , CCdd_Viewer_Base::eCtrl_other = 255 }
	viewer type More...
enum class	CCdd_Viewer_Base::E_memberIndex { CCdd_Viewer_Base::e__allMandatory = 0 , CCdd_Viewer_Base::e_ctrl , CCdd_Viewer_Base::e_rect , CCdd_Viewer_Base::e_accessions }
enum class	CCdd_Viewer_Rect_Base::E_memberIndex {   CCdd_Viewer_Rect_Base::e__allMandatory = 0 , CCdd_Viewer_Rect_Base::e_top , CCdd_Viewer_Rect_Base::e_left , CCdd_Viewer_Rect_Base::e_width ,   CCdd_Viewer_Rect_Base::e_height }
enum	CDomain_parent_Base::EParent_type {   CDomain_parent_Base::eParent_type_classical = 0 , CDomain_parent_Base::eParent_type_fusion = 1 , CDomain_parent_Base::eParent_type_deletion = 2 , CDomain_parent_Base::eParent_type_permutation = 3 ,   CDomain_parent_Base::eParent_type_other = 255 }
enum class	CDomain_parent_Base::E_memberIndex { CDomain_parent_Base::e__allMandatory = 0 , CDomain_parent_Base::e_parent_type , CDomain_parent_Base::e_parentid , CDomain_parent_Base::e_seqannot }
enum	CFeature_evidence_Base::E_Choice {   CFeature_evidence_Base::e_not_set = 0 , CFeature_evidence_Base::e_Comment , CFeature_evidence_Base::e_Reference , CFeature_evidence_Base::e_Bsannot ,   CFeature_evidence_Base::e_Seqfeat , CFeature_evidence_Base::e_Book_ref }
	Choice variants. More...
enum	CFeature_evidence_Base::E_ChoiceStopper { CFeature_evidence_Base::e_MaxChoice = 6 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CGlobal_id_Base::E_memberIndex {   CGlobal_id_Base::e__allMandatory = 0 , CGlobal_id_Base::e_accession , CGlobal_id_Base::e_release , CGlobal_id_Base::e_version ,   CGlobal_id_Base::e_database }
enum class	CMatrix_Base::E_memberIndex {   CMatrix_Base::e__allMandatory = 0 , CMatrix_Base::e_ncolumns , CMatrix_Base::e_nrows , CMatrix_Base::e_row_labels ,   CMatrix_Base::e_scale_factor , CMatrix_Base::e_columns , CMatrix_Base::e__allMandatory = 0 , CMatrix_Base::e_Attlist ,   CMatrix_Base::e_BvarQ , CMatrix_Base::e_DomainQ , CMatrix_Base::e_ContExp }
enum class	CNode_annotation_Base::E_memberIndex { CNode_annotation_Base::e__allMandatory = 0 , CNode_annotation_Base::e_presentInChildCD , CNode_annotation_Base::e_note }
enum class	CReject_id_Base::E_memberIndex { CReject_id_Base::e__allMandatory = 0 , CReject_id_Base::e_description , CReject_id_Base::e_ids }
enum class	CSeqTree_node_Base::C_Children::C_Footprint::E_memberIndex { CSeqTree_node_Base::C_Children::C_Footprint::e__allMandatory = 0 , CSeqTree_node_Base::C_Children::C_Footprint::e_seqRange , CSeqTree_node_Base::C_Children::C_Footprint::e_rowId }
enum	CSeqTree_node_Base::C_Children::E_Choice { CSeqTree_node_Base::C_Children::e_not_set = 0 , CSeqTree_node_Base::C_Children::e_Children , CSeqTree_node_Base::C_Children::e_Footprint }
	Choice variants. More...
enum	CSeqTree_node_Base::C_Children::E_ChoiceStopper { CSeqTree_node_Base::C_Children::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CSeqTree_node_Base::E_memberIndex {   CSeqTree_node_Base::e__allMandatory = 0 , CSeqTree_node_Base::e_isAnnotated , CSeqTree_node_Base::e_name , CSeqTree_node_Base::e_distance ,   CSeqTree_node_Base::e_children , CSeqTree_node_Base::e_annotation }
enum class	CSequence_tree_Base::E_memberIndex {   CSequence_tree_Base::e__allMandatory = 0 , CSequence_tree_Base::e_cdAccession , CSequence_tree_Base::e_algorithm , CSequence_tree_Base::e_isAnnotated ,   CSequence_tree_Base::e_root }
enum class	CTriangle_Base::E_memberIndex { CTriangle_Base::e__allMandatory = 0 , CTriangle_Base::e_nelements , CTriangle_Base::e_scores , CTriangle_Base::e_div_ranks }
enum	CUpdate_align_Base::EType {   CUpdate_align_Base::eType_unassigned = 0 , CUpdate_align_Base::eType_update = 1 , CUpdate_align_Base::eType_update_3d = 2 , CUpdate_align_Base::eType_demoted = 51 ,   CUpdate_align_Base::eType_demoted_3d = 52 , CUpdate_align_Base::eType_other = 255 }
enum class	CUpdate_align_Base::E_memberIndex { CUpdate_align_Base::e__allMandatory = 0 , CUpdate_align_Base::e_description , CUpdate_align_Base::e_seqannot , CUpdate_align_Base::e_type }
enum	CUpdate_comment_Base::E_Choice {   CUpdate_comment_Base::e_not_set = 0 , CUpdate_comment_Base::e_Comment , CUpdate_comment_Base::e_Addthis , CUpdate_comment_Base::e_Replaces ,   CUpdate_comment_Base::e_Reject_loc , CUpdate_comment_Base::e_Reference }
	Choice variants. More...
enum	CUpdate_comment_Base::E_ChoiceStopper { CUpdate_comment_Base::e_MaxChoice = 6 }
	Maximum+1 value of the choice variant enumerator. More...

Functions
	CAlgorithm_type::CAlgorithm_type (void)
	CAlgorithm_type::~CAlgorithm_type (void)
	CAlgorithm_type::CAlgorithm_type (const CAlgorithm_type &value)
CAlgorithm_type &	CAlgorithm_type::operator= (const CAlgorithm_type &value)
	CAlgorithm_type_Base::CAlgorithm_type_Base (void)
virtual	CAlgorithm_type_Base::~CAlgorithm_type_Base (void)
	CAlgorithm_type_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CAlgorithm_type_Base::EScoring_Scheme (void)
	Access to EScoring_Scheme's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CAlgorithm_type_Base::EClustering_Method (void)
	Access to EClustering_Method's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CAlgorithm_type_Base::EScore_Matrix (void)
	Access to EScore_Matrix's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CAlgorithm_type_Base::ETree_scope (void)
	Access to ETree_scope's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CAlgorithm_type_Base::EColoring_scope (void)
	Access to EColoring_scope's attributes (values, names) as defined in spec. More...
bool	CAlgorithm_type_Base::IsSetScoring_Scheme (void) const
	Check if a value has been assigned to Scoring_Scheme data member. More...
bool	CAlgorithm_type_Base::CanGetScoring_Scheme (void) const
	Check if it is safe to call GetScoring_Scheme method. More...
void	CAlgorithm_type_Base::ResetScoring_Scheme (void)
	Reset Scoring_Scheme data member. More...
TScoring_Scheme	CAlgorithm_type_Base::GetScoring_Scheme (void) const
	Get the Scoring_Scheme member data. More...
void	CAlgorithm_type_Base::SetScoring_Scheme (TScoring_Scheme value)
	Assign a value to Scoring_Scheme data member. More...
TScoring_Scheme &	CAlgorithm_type_Base::SetScoring_Scheme (void)
	Assign a value to Scoring_Scheme data member. More...
bool	CAlgorithm_type_Base::IsSetClustering_Method (void) const
	Check if a value has been assigned to Clustering_Method data member. More...
bool	CAlgorithm_type_Base::CanGetClustering_Method (void) const
	Check if it is safe to call GetClustering_Method method. More...
void	CAlgorithm_type_Base::ResetClustering_Method (void)
	Reset Clustering_Method data member. More...
TClustering_Method	CAlgorithm_type_Base::GetClustering_Method (void) const
	Get the Clustering_Method member data. More...
void	CAlgorithm_type_Base::SetClustering_Method (TClustering_Method value)
	Assign a value to Clustering_Method data member. More...
TClustering_Method &	CAlgorithm_type_Base::SetClustering_Method (void)
	Assign a value to Clustering_Method data member. More...
bool	CAlgorithm_type_Base::IsSetScore_Matrix (void) const
	Check if a value has been assigned to Score_Matrix data member. More...
bool	CAlgorithm_type_Base::CanGetScore_Matrix (void) const
	Check if it is safe to call GetScore_Matrix method. More...
void	CAlgorithm_type_Base::ResetScore_Matrix (void)
	Reset Score_Matrix data member. More...
TScore_Matrix	CAlgorithm_type_Base::GetScore_Matrix (void) const
	Get the Score_Matrix member data. More...
void	CAlgorithm_type_Base::SetScore_Matrix (TScore_Matrix value)
	Assign a value to Score_Matrix data member. More...
TScore_Matrix &	CAlgorithm_type_Base::SetScore_Matrix (void)
	Assign a value to Score_Matrix data member. More...
bool	CAlgorithm_type_Base::IsSetGapOpen (void) const
	Check if a value has been assigned to GapOpen data member. More...
bool	CAlgorithm_type_Base::CanGetGapOpen (void) const
	Check if it is safe to call GetGapOpen method. More...
void	CAlgorithm_type_Base::ResetGapOpen (void)
	Reset GapOpen data member. More...
TGapOpen	CAlgorithm_type_Base::GetGapOpen (void) const
	Get the GapOpen member data. More...
void	CAlgorithm_type_Base::SetGapOpen (TGapOpen value)
	Assign a value to GapOpen data member. More...
TGapOpen &	CAlgorithm_type_Base::SetGapOpen (void)
	Assign a value to GapOpen data member. More...
bool	CAlgorithm_type_Base::IsSetGapExtend (void) const
	Check if a value has been assigned to GapExtend data member. More...
bool	CAlgorithm_type_Base::CanGetGapExtend (void) const
	Check if it is safe to call GetGapExtend method. More...
void	CAlgorithm_type_Base::ResetGapExtend (void)
	Reset GapExtend data member. More...
TGapExtend	CAlgorithm_type_Base::GetGapExtend (void) const
	Get the GapExtend member data. More...
void	CAlgorithm_type_Base::SetGapExtend (TGapExtend value)
	Assign a value to GapExtend data member. More...
TGapExtend &	CAlgorithm_type_Base::SetGapExtend (void)
	Assign a value to GapExtend data member. More...
bool	CAlgorithm_type_Base::IsSetGapScaleFactor (void) const
	Check if a value has been assigned to GapScaleFactor data member. More...
bool	CAlgorithm_type_Base::CanGetGapScaleFactor (void) const
	Check if it is safe to call GetGapScaleFactor method. More...
void	CAlgorithm_type_Base::ResetGapScaleFactor (void)
	Reset GapScaleFactor data member. More...
TGapScaleFactor	CAlgorithm_type_Base::GetGapScaleFactor (void) const
	Get the GapScaleFactor member data. More...
void	CAlgorithm_type_Base::SetGapScaleFactor (TGapScaleFactor value)
	Assign a value to GapScaleFactor data member. More...
TGapScaleFactor &	CAlgorithm_type_Base::SetGapScaleFactor (void)
	Assign a value to GapScaleFactor data member. More...
bool	CAlgorithm_type_Base::IsSetNTerminalExt (void) const
	Check if a value has been assigned to NTerminalExt data member. More...
bool	CAlgorithm_type_Base::CanGetNTerminalExt (void) const
	Check if it is safe to call GetNTerminalExt method. More...
void	CAlgorithm_type_Base::ResetNTerminalExt (void)
	Reset NTerminalExt data member. More...
TNTerminalExt	CAlgorithm_type_Base::GetNTerminalExt (void) const
	Get the NTerminalExt member data. More...
void	CAlgorithm_type_Base::SetNTerminalExt (TNTerminalExt value)
	Assign a value to NTerminalExt data member. More...
TNTerminalExt &	CAlgorithm_type_Base::SetNTerminalExt (void)
	Assign a value to NTerminalExt data member. More...
bool	CAlgorithm_type_Base::IsSetCTerminalExt (void) const
	Check if a value has been assigned to CTerminalExt data member. More...
bool	CAlgorithm_type_Base::CanGetCTerminalExt (void) const
	Check if it is safe to call GetCTerminalExt method. More...
void	CAlgorithm_type_Base::ResetCTerminalExt (void)
	Reset CTerminalExt data member. More...
TCTerminalExt	CAlgorithm_type_Base::GetCTerminalExt (void) const
	Get the CTerminalExt member data. More...
void	CAlgorithm_type_Base::SetCTerminalExt (TCTerminalExt value)
	Assign a value to CTerminalExt data member. More...
TCTerminalExt &	CAlgorithm_type_Base::SetCTerminalExt (void)
	Assign a value to CTerminalExt data member. More...
bool	CAlgorithm_type_Base::IsSetTree_scope (void) const
	Check if a value has been assigned to Tree_scope data member. More...
bool	CAlgorithm_type_Base::CanGetTree_scope (void) const
	Check if it is safe to call GetTree_scope method. More...
void	CAlgorithm_type_Base::ResetTree_scope (void)
	Reset Tree_scope data member. More...
TTree_scope	CAlgorithm_type_Base::GetTree_scope (void) const
	Get the Tree_scope member data. More...
void	CAlgorithm_type_Base::SetTree_scope (TTree_scope value)
	Assign a value to Tree_scope data member. More...
TTree_scope &	CAlgorithm_type_Base::SetTree_scope (void)
	Assign a value to Tree_scope data member. More...
bool	CAlgorithm_type_Base::IsSetColoring_scope (void) const
	Check if a value has been assigned to Coloring_scope data member. More...
bool	CAlgorithm_type_Base::CanGetColoring_scope (void) const
	Check if it is safe to call GetColoring_scope method. More...
void	CAlgorithm_type_Base::ResetColoring_scope (void)
	Reset Coloring_scope data member. More...
TColoring_scope	CAlgorithm_type_Base::GetColoring_scope (void) const
	Get the Coloring_scope member data. More...
void	CAlgorithm_type_Base::SetColoring_scope (TColoring_scope value)
	Assign a value to Coloring_scope data member. More...
TColoring_scope &	CAlgorithm_type_Base::SetColoring_scope (void)
	Assign a value to Coloring_scope data member. More...
virtual void	CAlgorithm_type_Base::Reset (void)
	Reset the whole object. More...
	CAlgorithm_type_Base::CAlgorithm_type_Base (const CAlgorithm_type_Base &)
CAlgorithm_type_Base &	CAlgorithm_type_Base::operator= (const CAlgorithm_type_Base &)
	CAlign_annot::CAlign_annot (void)
	CAlign_annot::~CAlign_annot (void)
	CAlign_annot::CAlign_annot (const CAlign_annot &value)
CAlign_annot &	CAlign_annot::operator= (const CAlign_annot &value)
	CAlign_annot_Base::CAlign_annot_Base (void)
virtual	CAlign_annot_Base::~CAlign_annot_Base (void)
	CAlign_annot_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CAlign_annot_Base::IsSetLocation (void) const
	points to a location in one of the aligned sequences, usually the master/representative Check if a value has been assigned to Location data member. More...
bool	CAlign_annot_Base::CanGetLocation (void) const
	Check if it is safe to call GetLocation method. More...
void	CAlign_annot_Base::ResetLocation (void)
	Reset Location data member. More...
const TLocation &	CAlign_annot_Base::GetLocation (void) const
	Get the Location member data. More...
void	CAlign_annot_Base::SetLocation (TLocation &value)
	Assign a value to Location data member. More...
TLocation &	CAlign_annot_Base::SetLocation (void)
	Assign a value to Location data member. More...
bool	CAlign_annot_Base::IsSetDescription (void) const
	to hold descriptions/names like "Heme binding site" or "catalytic triad" etc., something that should be used for labels in visualization Check if a value has been assigned to Description data member. More...
bool	CAlign_annot_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CAlign_annot_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CAlign_annot_Base::GetDescription (void) const
	Get the Description member data. More...
void	CAlign_annot_Base::SetDescription (const TDescription &value)
	Assign a value to Description data member. More...
void	CAlign_annot_Base::SetDescription (TDescription &&value)
TDescription &	CAlign_annot_Base::SetDescription (void)
	Assign a value to Description data member. More...
bool	CAlign_annot_Base::IsSetEvidence (void) const
	evidence we can compute with Check if a value has been assigned to Evidence data member. More...
bool	CAlign_annot_Base::CanGetEvidence (void) const
	Check if it is safe to call GetEvidence method. More...
void	CAlign_annot_Base::ResetEvidence (void)
	Reset Evidence data member. More...
const TEvidence &	CAlign_annot_Base::GetEvidence (void) const
	Get the Evidence member data. More...
TEvidence &	CAlign_annot_Base::SetEvidence (void)
	Assign a value to Evidence data member. More...
bool	CAlign_annot_Base::IsSetType (void) const
	for typing annotated features 0 . More...
bool	CAlign_annot_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CAlign_annot_Base::ResetType (void)
	Reset Type data member. More...
TType	CAlign_annot_Base::GetType (void) const
	Get the Type member data. More...
void	CAlign_annot_Base::SetType (TType value)
	Assign a value to Type data member. More...
TType &	CAlign_annot_Base::SetType (void)
	Assign a value to Type data member. More...
bool	CAlign_annot_Base::IsSetAliases (void) const
	adding more names for indexing Check if a value has been assigned to Aliases data member. More...
bool	CAlign_annot_Base::CanGetAliases (void) const
	Check if it is safe to call GetAliases method. More...
void	CAlign_annot_Base::ResetAliases (void)
	Reset Aliases data member. More...
const TAliases &	CAlign_annot_Base::GetAliases (void) const
	Get the Aliases member data. More...
TAliases &	CAlign_annot_Base::SetAliases (void)
	Assign a value to Aliases data member. More...
bool	CAlign_annot_Base::IsSetMotif (void) const
	to validate mapping of sites Check if a value has been assigned to Motif data member. More...
bool	CAlign_annot_Base::CanGetMotif (void) const
	Check if it is safe to call GetMotif method. More...
void	CAlign_annot_Base::ResetMotif (void)
	Reset Motif data member. More...
const TMotif &	CAlign_annot_Base::GetMotif (void) const
	Get the Motif member data. More...
void	CAlign_annot_Base::SetMotif (const TMotif &value)
	Assign a value to Motif data member. More...
void	CAlign_annot_Base::SetMotif (TMotif &&value)
TMotif &	CAlign_annot_Base::SetMotif (void)
	Assign a value to Motif data member. More...
bool	CAlign_annot_Base::IsSetMotifuse (void) const
	0 for validation, 1 for motif somewhere in seqloc 2 for multiple motifs in seqloc Check if a value has been assigned to Motifuse data member. More...
bool	CAlign_annot_Base::CanGetMotifuse (void) const
	Check if it is safe to call GetMotifuse method. More...
void	CAlign_annot_Base::ResetMotifuse (void)
	Reset Motifuse data member. More...
TMotifuse	CAlign_annot_Base::GetMotifuse (void) const
	Get the Motifuse member data. More...
void	CAlign_annot_Base::SetMotifuse (TMotifuse value)
	Assign a value to Motifuse data member. More...
TMotifuse &	CAlign_annot_Base::SetMotifuse (void)
	Assign a value to Motifuse data member. More...
virtual void	CAlign_annot_Base::Reset (void)
	Reset the whole object. More...
	CAlign_annot_Base::CAlign_annot_Base (const CAlign_annot_Base &)
CAlign_annot_Base &	CAlign_annot_Base::operator= (const CAlign_annot_Base &)
	CAlign_annot_set::CAlign_annot_set (void)
	CAlign_annot_set::~CAlign_annot_set (void)
	CAlign_annot_set::CAlign_annot_set (const CAlign_annot_set &value)
CAlign_annot_set &	CAlign_annot_set::operator= (const CAlign_annot_set &value)
	CAlign_annot_set_Base::CAlign_annot_set_Base (void)
virtual	CAlign_annot_set_Base::~CAlign_annot_set_Base (void)
	CAlign_annot_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CAlign_annot_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CAlign_annot_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CAlign_annot_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CAlign_annot_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CAlign_annot_set_Base::Set (void)
	Assign a value to data member. More...
	CAlign_annot_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CAlign_annot_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CAlign_annot_set_Base::CAlign_annot_set_Base (const CAlign_annot_set_Base &)
CAlign_annot_set_Base &	CAlign_annot_set_Base::operator= (const CAlign_annot_set_Base &)
	CCdd_Base::CCdd_Base (void)
virtual	CCdd_Base::~CCdd_Base (void)
	CCdd_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_Base::IsSetName (void) const
	a short name (can be the accession..) Check if a value has been assigned to Name data member. More...
bool	CCdd_Base::CanGetName (void) const
	Check if it is safe to call GetName method. More...
void	CCdd_Base::ResetName (void)
	Reset Name data member. More...
const TName &	CCdd_Base::GetName (void) const
	Get the Name member data. More...
void	CCdd_Base::SetName (const TName &value)
	Assign a value to Name data member. More...
void	CCdd_Base::SetName (TName &&value)
TName &	CCdd_Base::SetName (void)
	Assign a value to Name data member. More...
bool	CCdd_Base::IsSetId (void) const
	this CD's Ids Check if a value has been assigned to Id data member. More...
bool	CCdd_Base::CanGetId (void) const
	Check if it is safe to call GetId method. More...
void	CCdd_Base::ResetId (void)
	Reset Id data member. More...
const TId &	CCdd_Base::GetId (void) const
	Get the Id member data. More...
void	CCdd_Base::SetId (TId &value)
	Assign a value to Id data member. More...
TId &	CCdd_Base::SetId (void)
	Assign a value to Id data member. More...
bool	CCdd_Base::IsSetDescription (void) const
	status, references, etc. More...
bool	CCdd_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CCdd_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CCdd_Base::GetDescription (void) const
	Get the Description member data. More...
void	CCdd_Base::SetDescription (TDescription &value)
	Assign a value to Description data member. More...
TDescription &	CCdd_Base::SetDescription (void)
	Assign a value to Description data member. More...
bool	CCdd_Base::IsSetSeqannot (void) const
	contains the CD alignment Check if a value has been assigned to Seqannot data member. More...
bool	CCdd_Base::CanGetSeqannot (void) const
	Check if it is safe to call GetSeqannot method. More...
void	CCdd_Base::ResetSeqannot (void)
	Reset Seqannot data member. More...
const TSeqannot &	CCdd_Base::GetSeqannot (void) const
	Get the Seqannot member data. More...
TSeqannot &	CCdd_Base::SetSeqannot (void)
	Assign a value to Seqannot data member. More...
bool	CCdd_Base::IsSetFeatures (void) const
	contains structure alignment data or "core" definitions Check if a value has been assigned to Features data member. More...
bool	CCdd_Base::CanGetFeatures (void) const
	Check if it is safe to call GetFeatures method. More...
void	CCdd_Base::ResetFeatures (void)
	Reset Features data member. More...
const TFeatures &	CCdd_Base::GetFeatures (void) const
	Get the Features member data. More...
void	CCdd_Base::SetFeatures (TFeatures &value)
	Assign a value to Features data member. More...
TFeatures &	CCdd_Base::SetFeatures (void)
	Assign a value to Features data member. More...
bool	CCdd_Base::IsSetSequences (void) const
	store as bioseq-set inside seq-entry Check if a value has been assigned to Sequences data member. More...
bool	CCdd_Base::CanGetSequences (void) const
	Check if it is safe to call GetSequences method. More...
void	CCdd_Base::ResetSequences (void)
	Reset Sequences data member. More...
const TSequences &	CCdd_Base::GetSequences (void) const
	Get the Sequences member data. More...
void	CCdd_Base::SetSequences (TSequences &value)
	Assign a value to Sequences data member. More...
TSequences &	CCdd_Base::SetSequences (void)
	Assign a value to Sequences data member. More...
bool	CCdd_Base::IsSetProfile_range (void) const
	profile for this region only also stores the Seq-id of the master Check if a value has been assigned to Profile_range data member. More...
bool	CCdd_Base::CanGetProfile_range (void) const
	Check if it is safe to call GetProfile_range method. More...
void	CCdd_Base::ResetProfile_range (void)
	Reset Profile_range data member. More...
const TProfile_range &	CCdd_Base::GetProfile_range (void) const
	Get the Profile_range member data. More...
void	CCdd_Base::SetProfile_range (TProfile_range &value)
	Assign a value to Profile_range data member. More...
TProfile_range &	CCdd_Base::SetProfile_range (void)
	Assign a value to Profile_range data member. More...
bool	CCdd_Base::IsSetTrunc_master (void) const
	holds the truncated master, which may be something like a consensus, uses the same sequence coordinate frame as the profile-range Check if a value has been assigned to Trunc_master data member. More...
bool	CCdd_Base::CanGetTrunc_master (void) const
	Check if it is safe to call GetTrunc_master method. More...
void	CCdd_Base::ResetTrunc_master (void)
	Reset Trunc_master data member. More...
const TTrunc_master &	CCdd_Base::GetTrunc_master (void) const
	Get the Trunc_master member data. More...
void	CCdd_Base::SetTrunc_master (TTrunc_master &value)
	Assign a value to Trunc_master data member. More...
TTrunc_master &	CCdd_Base::SetTrunc_master (void)
	Assign a value to Trunc_master data member. More...
bool	CCdd_Base::IsSetPosfreq (void) const
	relative residue frequencies Check if a value has been assigned to Posfreq data member. More...
bool	CCdd_Base::CanGetPosfreq (void) const
	Check if it is safe to call GetPosfreq method. More...
void	CCdd_Base::ResetPosfreq (void)
	Reset Posfreq data member. More...
const TPosfreq &	CCdd_Base::GetPosfreq (void) const
	Get the Posfreq member data. More...
void	CCdd_Base::SetPosfreq (TPosfreq &value)
	Assign a value to Posfreq data member. More...
TPosfreq &	CCdd_Base::SetPosfreq (void)
	Assign a value to Posfreq data member. More...
bool	CCdd_Base::IsSetScoremat (void) const
	Position dependent score matrix Check if a value has been assigned to Scoremat data member. More...
bool	CCdd_Base::CanGetScoremat (void) const
	Check if it is safe to call GetScoremat method. More...
void	CCdd_Base::ResetScoremat (void)
	Reset Scoremat data member. More...
const TScoremat &	CCdd_Base::GetScoremat (void) const
	Get the Scoremat member data. More...
void	CCdd_Base::SetScoremat (TScoremat &value)
	Assign a value to Scoremat data member. More...
TScoremat &	CCdd_Base::SetScoremat (void)
	Assign a value to Scoremat data member. More...
bool	CCdd_Base::IsSetDistance (void) const
	pairwise distances for all seqs. More...
bool	CCdd_Base::CanGetDistance (void) const
	Check if it is safe to call GetDistance method. More...
void	CCdd_Base::ResetDistance (void)
	Reset Distance data member. More...
const TDistance &	CCdd_Base::GetDistance (void) const
	Get the Distance member data. More...
void	CCdd_Base::SetDistance (TDistance &value)
	Assign a value to Distance data member. More...
TDistance &	CCdd_Base::SetDistance (void)
	Assign a value to Distance data member. More...
bool	CCdd_Base::IsSetParent (void) const
	this CD is the result of a split Check if a value has been assigned to Parent data member. More...
bool	CCdd_Base::CanGetParent (void) const
	Check if it is safe to call GetParent method. More...
void	CCdd_Base::ResetParent (void)
	Reset Parent data member. More...
const TParent &	CCdd_Base::GetParent (void) const
	Get the Parent member data. More...
void	CCdd_Base::SetParent (TParent &value)
	Assign a value to Parent data member. More...
TParent &	CCdd_Base::SetParent (void)
	Assign a value to Parent data member. More...
bool	CCdd_Base::IsSetChildren (void) const
	this CD has been split, not used Check if a value has been assigned to Children data member. More...
bool	CCdd_Base::CanGetChildren (void) const
	Check if it is safe to call GetChildren method. More...
void	CCdd_Base::ResetChildren (void)
	Reset Children data member. More...
const TChildren &	CCdd_Base::GetChildren (void) const
	Get the Children member data. More...
void	CCdd_Base::SetChildren (TChildren &value)
	Assign a value to Children data member. More...
TChildren &	CCdd_Base::SetChildren (void)
	Assign a value to Children data member. More...
bool	CCdd_Base::IsSetSiblings (void) const
	related CDs (common hits), clusters Check if a value has been assigned to Siblings data member. More...
bool	CCdd_Base::CanGetSiblings (void) const
	Check if it is safe to call GetSiblings method. More...
void	CCdd_Base::ResetSiblings (void)
	Reset Siblings data member. More...
const TSiblings &	CCdd_Base::GetSiblings (void) const
	Get the Siblings member data. More...
void	CCdd_Base::SetSiblings (TSiblings &value)
	Assign a value to Siblings data member. More...
TSiblings &	CCdd_Base::SetSiblings (void)
	Assign a value to Siblings data member. More...
bool	CCdd_Base::IsSetNeighbors (void) const
	co-occurring CDs, not used Check if a value has been assigned to Neighbors data member. More...
bool	CCdd_Base::CanGetNeighbors (void) const
	Check if it is safe to call GetNeighbors method. More...
void	CCdd_Base::ResetNeighbors (void)
	Reset Neighbors data member. More...
const TNeighbors &	CCdd_Base::GetNeighbors (void) const
	Get the Neighbors member data. More...
void	CCdd_Base::SetNeighbors (TNeighbors &value)
	Assign a value to Neighbors data member. More...
TNeighbors &	CCdd_Base::SetNeighbors (void)
	Assign a value to Neighbors data member. More...
bool	CCdd_Base::IsSetPending (void) const
	contains alignments from update or "lower panel" Check if a value has been assigned to Pending data member. More...
bool	CCdd_Base::CanGetPending (void) const
	Check if it is safe to call GetPending method. More...
void	CCdd_Base::ResetPending (void)
	Reset Pending data member. More...
const TPending &	CCdd_Base::GetPending (void) const
	Get the Pending member data. More...
TPending &	CCdd_Base::SetPending (void)
	Assign a value to Pending data member. More...
bool	CCdd_Base::IsSetRejects (void) const
	SeqIds of rejected CD- members, ignore in update Check if a value has been assigned to Rejects data member. More...
bool	CCdd_Base::CanGetRejects (void) const
	Check if it is safe to call GetRejects method. More...
void	CCdd_Base::ResetRejects (void)
	Reset Rejects data member. More...
const TRejects &	CCdd_Base::GetRejects (void) const
	Get the Rejects member data. More...
TRejects &	CCdd_Base::SetRejects (void)
	Assign a value to Rejects data member. More...
bool	CCdd_Base::IsSetMaster3d (void) const
	record if CD has a 3D representative Check if a value has been assigned to Master3d data member. More...
bool	CCdd_Base::CanGetMaster3d (void) const
	Check if it is safe to call GetMaster3d method. More...
void	CCdd_Base::ResetMaster3d (void)
	Reset Master3d data member. More...
const TMaster3d &	CCdd_Base::GetMaster3d (void) const
	Get the Master3d member data. More...
TMaster3d &	CCdd_Base::SetMaster3d (void)
	Assign a value to Master3d data member. More...
bool	CCdd_Base::IsSetAlignannot (void) const
	alignment annotation Check if a value has been assigned to Alignannot data member. More...
bool	CCdd_Base::CanGetAlignannot (void) const
	Check if it is safe to call GetAlignannot method. More...
void	CCdd_Base::ResetAlignannot (void)
	Reset Alignannot data member. More...
const TAlignannot &	CCdd_Base::GetAlignannot (void) const
	Get the Alignannot member data. More...
void	CCdd_Base::SetAlignannot (TAlignannot &value)
	Assign a value to Alignannot data member. More...
TAlignannot &	CCdd_Base::SetAlignannot (void)
	Assign a value to Alignannot data member. More...
bool	CCdd_Base::IsSetStyle_dictionary (void) const
	record rendering styles Check if a value has been assigned to Style_dictionary data member. More...
bool	CCdd_Base::CanGetStyle_dictionary (void) const
	Check if it is safe to call GetStyle_dictionary method. More...
void	CCdd_Base::ResetStyle_dictionary (void)
	Reset Style_dictionary data member. More...
const TStyle_dictionary &	CCdd_Base::GetStyle_dictionary (void) const
	Get the Style_dictionary member data. More...
void	CCdd_Base::SetStyle_dictionary (TStyle_dictionary &value)
	Assign a value to Style_dictionary data member. More...
TStyle_dictionary &	CCdd_Base::SetStyle_dictionary (void)
	Assign a value to Style_dictionary data member. More...
bool	CCdd_Base::IsSetUser_annotations (void) const
	user annotations in Cn3D Check if a value has been assigned to User_annotations data member. More...
bool	CCdd_Base::CanGetUser_annotations (void) const
	Check if it is safe to call GetUser_annotations method. More...
void	CCdd_Base::ResetUser_annotations (void)
	Reset User_annotations data member. More...
const TUser_annotations &	CCdd_Base::GetUser_annotations (void) const
	Get the User_annotations member data. More...
void	CCdd_Base::SetUser_annotations (TUser_annotations &value)
	Assign a value to User_annotations data member. More...
TUser_annotations &	CCdd_Base::SetUser_annotations (void)
	Assign a value to User_annotations data member. More...
bool	CCdd_Base::IsSetAncestors (void) const
	list of parents Check if a value has been assigned to Ancestors data member. More...
bool	CCdd_Base::CanGetAncestors (void) const
	Check if it is safe to call GetAncestors method. More...
void	CCdd_Base::ResetAncestors (void)
	Reset Ancestors data member. More...
const TAncestors &	CCdd_Base::GetAncestors (void) const
	Get the Ancestors member data. More...
TAncestors &	CCdd_Base::SetAncestors (void)
	Assign a value to Ancestors data member. More...
bool	CCdd_Base::IsSetScoreparams (void) const
	Check if a value has been assigned to Scoreparams data member. More...
bool	CCdd_Base::CanGetScoreparams (void) const
	Check if it is safe to call GetScoreparams method. More...
void	CCdd_Base::ResetScoreparams (void)
	Reset Scoreparams data member. More...
const TScoreparams &	CCdd_Base::GetScoreparams (void) const
	Get the Scoreparams member data. More...
void	CCdd_Base::SetScoreparams (TScoreparams &value)
	Assign a value to Scoreparams data member. More...
TScoreparams &	CCdd_Base::SetScoreparams (void)
	Assign a value to Scoreparams data member. More...
bool	CCdd_Base::IsSetSeqtree (void) const
	Check if a value has been assigned to Seqtree data member. More...
bool	CCdd_Base::CanGetSeqtree (void) const
	Check if it is safe to call GetSeqtree method. More...
void	CCdd_Base::ResetSeqtree (void)
	Reset Seqtree data member. More...
const TSeqtree &	CCdd_Base::GetSeqtree (void) const
	Get the Seqtree member data. More...
void	CCdd_Base::SetSeqtree (TSeqtree &value)
	Assign a value to Seqtree data member. More...
TSeqtree &	CCdd_Base::SetSeqtree (void)
	Assign a value to Seqtree data member. More...
virtual void	CCdd_Base::Reset (void)
	Reset the whole object. More...
	CCdd_Base::CCdd_Base (const CCdd_Base &)
CCdd_Base &	CCdd_Base::operator= (const CCdd_Base &)
	CCdd_book_ref::CCdd_book_ref (void)
	CCdd_book_ref::~CCdd_book_ref (void)
	CCdd_book_ref::CCdd_book_ref (const CCdd_book_ref &value)
CCdd_book_ref &	CCdd_book_ref::operator= (const CCdd_book_ref &value)
	CCdd_book_ref_Base::CCdd_book_ref_Base (void)
virtual	CCdd_book_ref_Base::~CCdd_book_ref_Base (void)
	CCdd_book_ref_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_book_ref_Base::ETextelement (void)
	Access to ETextelement's attributes (values, names) as defined in spec. More...
bool	CCdd_book_ref_Base::IsSetBookname (void) const
	abbreviated book title Check if a value has been assigned to Bookname data member. More...
bool	CCdd_book_ref_Base::CanGetBookname (void) const
	Check if it is safe to call GetBookname method. More...
void	CCdd_book_ref_Base::ResetBookname (void)
	Reset Bookname data member. More...
const TBookname &	CCdd_book_ref_Base::GetBookname (void) const
	Get the Bookname member data. More...
void	CCdd_book_ref_Base::SetBookname (const TBookname &value)
	Assign a value to Bookname data member. More...
void	CCdd_book_ref_Base::SetBookname (TBookname &&value)
TBookname &	CCdd_book_ref_Base::SetBookname (void)
	Assign a value to Bookname data member. More...
bool	CCdd_book_ref_Base::IsSetTextelement (void) const
	Check if a value has been assigned to Textelement data member. More...
bool	CCdd_book_ref_Base::CanGetTextelement (void) const
	Check if it is safe to call GetTextelement method. More...
void	CCdd_book_ref_Base::ResetTextelement (void)
	Reset Textelement data member. More...
TTextelement	CCdd_book_ref_Base::GetTextelement (void) const
	Get the Textelement member data. More...
void	CCdd_book_ref_Base::SetTextelement (TTextelement value)
	Assign a value to Textelement data member. More...
TTextelement &	CCdd_book_ref_Base::SetTextelement (void)
	Assign a value to Textelement data member. More...
bool	CCdd_book_ref_Base::IsSetElementid (void) const
	numerical address of the text-element Check if a value has been assigned to Elementid data member. More...
bool	CCdd_book_ref_Base::CanGetElementid (void) const
	Check if it is safe to call GetElementid method. More...
void	CCdd_book_ref_Base::ResetElementid (void)
	Reset Elementid data member. More...
TElementid	CCdd_book_ref_Base::GetElementid (void) const
	Get the Elementid member data. More...
void	CCdd_book_ref_Base::SetElementid (TElementid value)
	Assign a value to Elementid data member. More...
TElementid &	CCdd_book_ref_Base::SetElementid (void)
	Assign a value to Elementid data member. More...
bool	CCdd_book_ref_Base::IsSetSubelementid (void) const
	exact address, used with section Check if a value has been assigned to Subelementid data member. More...
bool	CCdd_book_ref_Base::CanGetSubelementid (void) const
	Check if it is safe to call GetSubelementid method. More...
void	CCdd_book_ref_Base::ResetSubelementid (void)
	Reset Subelementid data member. More...
TSubelementid	CCdd_book_ref_Base::GetSubelementid (void) const
	Get the Subelementid member data. More...
void	CCdd_book_ref_Base::SetSubelementid (TSubelementid value)
	Assign a value to Subelementid data member. More...
TSubelementid &	CCdd_book_ref_Base::SetSubelementid (void)
	Assign a value to Subelementid data member. More...
bool	CCdd_book_ref_Base::IsSetCelementid (void) const
	address of the text element, if character string Check if a value has been assigned to Celementid data member. More...
bool	CCdd_book_ref_Base::CanGetCelementid (void) const
	Check if it is safe to call GetCelementid method. More...
void	CCdd_book_ref_Base::ResetCelementid (void)
	Reset Celementid data member. More...
const TCelementid &	CCdd_book_ref_Base::GetCelementid (void) const
	Get the Celementid member data. More...
void	CCdd_book_ref_Base::SetCelementid (const TCelementid &value)
	Assign a value to Celementid data member. More...
void	CCdd_book_ref_Base::SetCelementid (TCelementid &&value)
TCelementid &	CCdd_book_ref_Base::SetCelementid (void)
	Assign a value to Celementid data member. More...
bool	CCdd_book_ref_Base::IsSetCsubelementid (void) const
	exact address, if character string Check if a value has been assigned to Csubelementid data member. More...
bool	CCdd_book_ref_Base::CanGetCsubelementid (void) const
	Check if it is safe to call GetCsubelementid method. More...
void	CCdd_book_ref_Base::ResetCsubelementid (void)
	Reset Csubelementid data member. More...
const TCsubelementid &	CCdd_book_ref_Base::GetCsubelementid (void) const
	Get the Csubelementid member data. More...
void	CCdd_book_ref_Base::SetCsubelementid (const TCsubelementid &value)
	Assign a value to Csubelementid data member. More...
void	CCdd_book_ref_Base::SetCsubelementid (TCsubelementid &&value)
TCsubelementid &	CCdd_book_ref_Base::SetCsubelementid (void)
	Assign a value to Csubelementid data member. More...
virtual void	CCdd_book_ref_Base::Reset (void)
	Reset the whole object. More...
	CCdd_book_ref_Base::CCdd_book_ref_Base (const CCdd_book_ref_Base &)
CCdd_book_ref_Base &	CCdd_book_ref_Base::operator= (const CCdd_book_ref_Base &)
	CCdd_descr::CCdd_descr (void)
	CCdd_descr::~CCdd_descr (void)
	CCdd_descr::CCdd_descr (const CCdd_descr &value)
CCdd_descr &	CCdd_descr::operator= (const CCdd_descr &value)
	CCdd_descr_Base::CCdd_descr_Base (void)
virtual	CCdd_descr_Base::~CCdd_descr_Base (void)
	CCdd_descr_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_descr_Base::EStatus (void)
	Access to EStatus's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_descr_Base::ECuration_status (void)
	Access to ECuration_status's attributes (values, names) as defined in spec. More...
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_descr_Base::EReadonly_status (void)
	Access to EReadonly_status's attributes (values, names) as defined in spec. More...
virtual void	CCdd_descr_Base::Reset (void)
	Reset the whole object. More...
virtual void	CCdd_descr_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCdd_descr_Base::Which (void) const
	Which variant is currently selected. More...
void	CCdd_descr_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCdd_descr_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCdd_descr_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCdd_descr_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCdd_descr_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCdd_descr_Base::IsOthername (void) const
	Check if variant Othername is selected. More...
const TOthername &	CCdd_descr_Base::GetOthername (void) const
	Get the variant data. More...
TOthername &	CCdd_descr_Base::SetOthername (void)
	Select the variant. More...
void	CCdd_descr_Base::SetOthername (const TOthername &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsCategory (void) const
	Check if variant Category is selected. More...
const TCategory &	CCdd_descr_Base::GetCategory (void) const
	Get the variant data. More...
TCategory &	CCdd_descr_Base::SetCategory (void)
	Select the variant. More...
void	CCdd_descr_Base::SetCategory (const TCategory &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsComment (void) const
	Check if variant Comment is selected. More...
const TComment &	CCdd_descr_Base::GetComment (void) const
	Get the variant data. More...
TComment &	CCdd_descr_Base::SetComment (void)
	Select the variant. More...
void	CCdd_descr_Base::SetComment (const TComment &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsReference (void) const
	Check if variant Reference is selected. More...
const TReference &	CCdd_descr_Base::GetReference (void) const
	Get the variant data. More...
TReference &	CCdd_descr_Base::SetReference (void)
	Select the variant. More...
void	CCdd_descr_Base::SetReference (TReference &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsCreate_date (void) const
	Check if variant Create_date is selected. More...
const TCreate_date &	CCdd_descr_Base::GetCreate_date (void) const
	Get the variant data. More...
TCreate_date &	CCdd_descr_Base::SetCreate_date (void)
	Select the variant. More...
void	CCdd_descr_Base::SetCreate_date (TCreate_date &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsTax_source (void) const
	Check if variant Tax_source is selected. More...
const TTax_source &	CCdd_descr_Base::GetTax_source (void) const
	Get the variant data. More...
TTax_source &	CCdd_descr_Base::SetTax_source (void)
	Select the variant. More...
void	CCdd_descr_Base::SetTax_source (TTax_source &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsSource (void) const
	Check if variant Source is selected. More...
const TSource &	CCdd_descr_Base::GetSource (void) const
	Get the variant data. More...
TSource &	CCdd_descr_Base::SetSource (void)
	Select the variant. More...
void	CCdd_descr_Base::SetSource (const TSource &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsStatus (void) const
	Check if variant Status is selected. More...
TStatus	CCdd_descr_Base::GetStatus (void) const
	Get the variant data. More...
TStatus &	CCdd_descr_Base::SetStatus (void)
	Select the variant. More...
void	CCdd_descr_Base::SetStatus (TStatus value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsUpdate_date (void) const
	Check if variant Update_date is selected. More...
const TUpdate_date &	CCdd_descr_Base::GetUpdate_date (void) const
	Get the variant data. More...
TUpdate_date &	CCdd_descr_Base::SetUpdate_date (void)
	Select the variant. More...
void	CCdd_descr_Base::SetUpdate_date (TUpdate_date &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsScrapbook (void) const
	Check if variant Scrapbook is selected. More...
const TScrapbook &	CCdd_descr_Base::GetScrapbook (void) const
	Get the variant data. More...
TScrapbook &	CCdd_descr_Base::SetScrapbook (void)
	Select the variant. More...
bool	CCdd_descr_Base::IsSource_id (void) const
	Check if variant Source_id is selected. More...
const TSource_id &	CCdd_descr_Base::GetSource_id (void) const
	Get the variant data. More...
TSource_id &	CCdd_descr_Base::SetSource_id (void)
	Select the variant. More...
void	CCdd_descr_Base::SetSource_id (TSource_id &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsRepeats (void) const
	Check if variant Repeats is selected. More...
const TRepeats &	CCdd_descr_Base::GetRepeats (void) const
	Get the variant data. More...
TRepeats &	CCdd_descr_Base::SetRepeats (void)
	Select the variant. More...
void	CCdd_descr_Base::SetRepeats (TRepeats &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsOld_root (void) const
	Check if variant Old_root is selected. More...
const TOld_root &	CCdd_descr_Base::GetOld_root (void) const
	Get the variant data. More...
TOld_root &	CCdd_descr_Base::SetOld_root (void)
	Select the variant. More...
void	CCdd_descr_Base::SetOld_root (TOld_root &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsCuration_status (void) const
	Check if variant Curation_status is selected. More...
TCuration_status	CCdd_descr_Base::GetCuration_status (void) const
	Get the variant data. More...
TCuration_status &	CCdd_descr_Base::SetCuration_status (void)
	Select the variant. More...
void	CCdd_descr_Base::SetCuration_status (TCuration_status value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsReadonly_status (void) const
	Check if variant Readonly_status is selected. More...
TReadonly_status	CCdd_descr_Base::GetReadonly_status (void) const
	Get the variant data. More...
TReadonly_status &	CCdd_descr_Base::SetReadonly_status (void)
	Select the variant. More...
void	CCdd_descr_Base::SetReadonly_status (TReadonly_status value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsBook_ref (void) const
	Check if variant Book_ref is selected. More...
const TBook_ref &	CCdd_descr_Base::GetBook_ref (void) const
	Get the variant data. More...
TBook_ref &	CCdd_descr_Base::SetBook_ref (void)
	Select the variant. More...
void	CCdd_descr_Base::SetBook_ref (TBook_ref &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsAttribution (void) const
	Check if variant Attribution is selected. More...
const TAttribution &	CCdd_descr_Base::GetAttribution (void) const
	Get the variant data. More...
TAttribution &	CCdd_descr_Base::SetAttribution (void)
	Select the variant. More...
void	CCdd_descr_Base::SetAttribution (TAttribution &value)
	Select the variant and set its data. More...
bool	CCdd_descr_Base::IsTitle (void) const
	Check if variant Title is selected. More...
const TTitle &	CCdd_descr_Base::GetTitle (void) const
	Get the variant data. More...
TTitle &	CCdd_descr_Base::SetTitle (void)
	Select the variant. More...
void	CCdd_descr_Base::SetTitle (const TTitle &value)
	Select the variant and set its data. More...
	CCdd_descr_Base::CCdd_descr_Base (const CCdd_descr_Base &)
CCdd_descr_Base &	CCdd_descr_Base::operator= (const CCdd_descr_Base &)
void	CCdd_descr_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CCdd_descr_set::CCdd_descr_set (void)
	CCdd_descr_set::~CCdd_descr_set (void)
	CCdd_descr_set::CCdd_descr_set (const CCdd_descr_set &value)
CCdd_descr_set &	CCdd_descr_set::operator= (const CCdd_descr_set &value)
	CCdd_descr_set_Base::CCdd_descr_set_Base (void)
virtual	CCdd_descr_set_Base::~CCdd_descr_set_Base (void)
	CCdd_descr_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_descr_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_descr_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_descr_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_descr_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_descr_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_descr_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_descr_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_descr_set_Base::CCdd_descr_set_Base (const CCdd_descr_set_Base &)
CCdd_descr_set_Base &	CCdd_descr_set_Base::operator= (const CCdd_descr_set_Base &)
	CCdd_id::CCdd_id (void)
	CCdd_id::~CCdd_id (void)
	CCdd_id::CCdd_id (const CCdd_id &value)
CCdd_id &	CCdd_id::operator= (const CCdd_id &value)
	CCdd_id_Base::CCdd_id_Base (void)
virtual	CCdd_id_Base::~CCdd_id_Base (void)
	CCdd_id_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CCdd_id_Base::Reset (void)
	Reset the whole object. More...
virtual void	CCdd_id_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCdd_id_Base::Which (void) const
	Which variant is currently selected. More...
void	CCdd_id_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCdd_id_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCdd_id_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCdd_id_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCdd_id_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCdd_id_Base::IsUid (void) const
	Check if variant Uid is selected. More...
TUid	CCdd_id_Base::GetUid (void) const
	Get the variant data. More...
TUid &	CCdd_id_Base::SetUid (void)
	Select the variant. More...
void	CCdd_id_Base::SetUid (TUid value)
	Select the variant and set its data. More...
bool	CCdd_id_Base::IsGid (void) const
	Check if variant Gid is selected. More...
const TGid &	CCdd_id_Base::GetGid (void) const
	Get the variant data. More...
TGid &	CCdd_id_Base::SetGid (void)
	Select the variant. More...
void	CCdd_id_Base::SetGid (TGid &value)
	Select the variant and set its data. More...
	CCdd_id_Base::CCdd_id_Base (const CCdd_id_Base &)
CCdd_id_Base &	CCdd_id_Base::operator= (const CCdd_id_Base &)
void	CCdd_id_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CCdd_id_set::CCdd_id_set (void)
	CCdd_id_set::~CCdd_id_set (void)
	CCdd_id_set::CCdd_id_set (const CCdd_id_set &value)
CCdd_id_set &	CCdd_id_set::operator= (const CCdd_id_set &value)
	CCdd_id_set_Base::CCdd_id_set_Base (void)
virtual	CCdd_id_set_Base::~CCdd_id_set_Base (void)
	CCdd_id_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_id_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_id_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_id_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_id_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_id_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_id_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_id_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_id_set_Base::CCdd_id_set_Base (const CCdd_id_set_Base &)
CCdd_id_set_Base &	CCdd_id_set_Base::operator= (const CCdd_id_set_Base &)
	CCdd_org_ref::CCdd_org_ref (void)
	CCdd_org_ref::~CCdd_org_ref (void)
	CCdd_org_ref::CCdd_org_ref (const CCdd_org_ref &value)
CCdd_org_ref &	CCdd_org_ref::operator= (const CCdd_org_ref &value)
	CCdd_org_ref_Base::CCdd_org_ref_Base (void)
virtual	CCdd_org_ref_Base::~CCdd_org_ref_Base (void)
	CCdd_org_ref_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_org_ref_Base::IsSetReference (void) const
	Check if a value has been assigned to Reference data member. More...
bool	CCdd_org_ref_Base::CanGetReference (void) const
	Check if it is safe to call GetReference method. More...
void	CCdd_org_ref_Base::ResetReference (void)
	Reset Reference data member. More...
const TReference &	CCdd_org_ref_Base::GetReference (void) const
	Get the Reference member data. More...
void	CCdd_org_ref_Base::SetReference (TReference &value)
	Assign a value to Reference data member. More...
TReference &	CCdd_org_ref_Base::SetReference (void)
	Assign a value to Reference data member. More...
bool	CCdd_org_ref_Base::IsSetActive (void) const
	Check if a value has been assigned to Active data member. More...
bool	CCdd_org_ref_Base::CanGetActive (void) const
	Check if it is safe to call GetActive method. More...
void	CCdd_org_ref_Base::ResetActive (void)
	Reset Active data member. More...
void	CCdd_org_ref_Base::SetDefaultActive (void)
	Assign default value to Active data member. More...
TActive	CCdd_org_ref_Base::GetActive (void) const
	Get the Active member data. More...
void	CCdd_org_ref_Base::SetActive (TActive value)
	Assign a value to Active data member. More...
TActive &	CCdd_org_ref_Base::SetActive (void)
	Assign a value to Active data member. More...
bool	CCdd_org_ref_Base::IsSetParent_tax_id (void) const
	Check if a value has been assigned to Parent_tax_id data member. More...
bool	CCdd_org_ref_Base::CanGetParent_tax_id (void) const
	Check if it is safe to call GetParent_tax_id method. More...
void	CCdd_org_ref_Base::ResetParent_tax_id (void)
	Reset Parent_tax_id data member. More...
TParent_tax_id	CCdd_org_ref_Base::GetParent_tax_id (void) const
	Get the Parent_tax_id member data. More...
void	CCdd_org_ref_Base::SetParent_tax_id (TParent_tax_id value)
	Assign a value to Parent_tax_id data member. More...
TParent_tax_id &	CCdd_org_ref_Base::SetParent_tax_id (void)
	Assign a value to Parent_tax_id data member. More...
bool	CCdd_org_ref_Base::IsSetRank (void) const
	Check if a value has been assigned to Rank data member. More...
bool	CCdd_org_ref_Base::CanGetRank (void) const
	Check if it is safe to call GetRank method. More...
void	CCdd_org_ref_Base::ResetRank (void)
	Reset Rank data member. More...
const TRank &	CCdd_org_ref_Base::GetRank (void) const
	Get the Rank member data. More...
void	CCdd_org_ref_Base::SetRank (const TRank &value)
	Assign a value to Rank data member. More...
void	CCdd_org_ref_Base::SetRank (TRank &&value)
TRank &	CCdd_org_ref_Base::SetRank (void)
	Assign a value to Rank data member. More...
virtual void	CCdd_org_ref_Base::Reset (void)
	Reset the whole object. More...
	CCdd_org_ref_Base::CCdd_org_ref_Base (const CCdd_org_ref_Base &)
CCdd_org_ref_Base &	CCdd_org_ref_Base::operator= (const CCdd_org_ref_Base &)
	CCdd_org_ref_set::CCdd_org_ref_set (void)
	CCdd_org_ref_set::~CCdd_org_ref_set (void)
	CCdd_org_ref_set::CCdd_org_ref_set (const CCdd_org_ref_set &value)
CCdd_org_ref_set &	CCdd_org_ref_set::operator= (const CCdd_org_ref_set &value)
	CCdd_org_ref_set_Base::CCdd_org_ref_set_Base (void)
virtual	CCdd_org_ref_set_Base::~CCdd_org_ref_set_Base (void)
	CCdd_org_ref_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_org_ref_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_org_ref_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_org_ref_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_org_ref_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_org_ref_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_org_ref_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_org_ref_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_org_ref_set_Base::CCdd_org_ref_set_Base (const CCdd_org_ref_set_Base &)
CCdd_org_ref_set_Base &	CCdd_org_ref_set_Base::operator= (const CCdd_org_ref_set_Base &)
	CCdd_pref_node_descr::CCdd_pref_node_descr (void)
	CCdd_pref_node_descr::~CCdd_pref_node_descr (void)
	CCdd_pref_node_descr::CCdd_pref_node_descr (const CCdd_pref_node_descr &value)
CCdd_pref_node_descr &	CCdd_pref_node_descr::operator= (const CCdd_pref_node_descr &value)
	CCdd_pref_node_descr_Base::CCdd_pref_node_descr_Base (void)
virtual	CCdd_pref_node_descr_Base::~CCdd_pref_node_descr_Base (void)
	CCdd_pref_node_descr_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CCdd_pref_node_descr_Base::Reset (void)
	Reset the whole object. More...
virtual void	CCdd_pref_node_descr_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCdd_pref_node_descr_Base::Which (void) const
	Which variant is currently selected. More...
void	CCdd_pref_node_descr_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCdd_pref_node_descr_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCdd_pref_node_descr_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCdd_pref_node_descr_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCdd_pref_node_descr_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCdd_pref_node_descr_Base::IsCreate_date (void) const
	Check if variant Create_date is selected. More...
const TCreate_date &	CCdd_pref_node_descr_Base::GetCreate_date (void) const
	Get the variant data. More...
TCreate_date &	CCdd_pref_node_descr_Base::SetCreate_date (void)
	Select the variant. More...
void	CCdd_pref_node_descr_Base::SetCreate_date (TCreate_date &value)
	Select the variant and set its data. More...
bool	CCdd_pref_node_descr_Base::IsDescription (void) const
	Check if variant Description is selected. More...
const TDescription &	CCdd_pref_node_descr_Base::GetDescription (void) const
	Get the variant data. More...
TDescription &	CCdd_pref_node_descr_Base::SetDescription (void)
	Select the variant. More...
void	CCdd_pref_node_descr_Base::SetDescription (const TDescription &value)
	Select the variant and set its data. More...
	CCdd_pref_node_descr_Base::CCdd_pref_node_descr_Base (const CCdd_pref_node_descr_Base &)
CCdd_pref_node_descr_Base &	CCdd_pref_node_descr_Base::operator= (const CCdd_pref_node_descr_Base &)
void	CCdd_pref_node_descr_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CCdd_pref_node_descr_set::CCdd_pref_node_descr_set (void)
	CCdd_pref_node_descr_set::~CCdd_pref_node_descr_set (void)
	CCdd_pref_node_descr_set::CCdd_pref_node_descr_set (const CCdd_pref_node_descr_set &value)
CCdd_pref_node_descr_set &	CCdd_pref_node_descr_set::operator= (const CCdd_pref_node_descr_set &value)
	CCdd_pref_node_descr_set_Base::CCdd_pref_node_descr_set_Base (void)
virtual	CCdd_pref_node_descr_set_Base::~CCdd_pref_node_descr_set_Base (void)
	CCdd_pref_node_descr_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_pref_node_descr_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_pref_node_descr_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_pref_node_descr_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_pref_node_descr_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_pref_node_descr_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_pref_node_descr_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_pref_node_descr_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_pref_node_descr_set_Base::CCdd_pref_node_descr_set_Base (const CCdd_pref_node_descr_set_Base &)
CCdd_pref_node_descr_set_Base &	CCdd_pref_node_descr_set_Base::operator= (const CCdd_pref_node_descr_set_Base &)
	CCdd_pref_nodes::CCdd_pref_nodes (void)
	CCdd_pref_nodes::~CCdd_pref_nodes (void)
	CCdd_pref_nodes::CCdd_pref_nodes (const CCdd_pref_nodes &value)
CCdd_pref_nodes &	CCdd_pref_nodes::operator= (const CCdd_pref_nodes &value)
	CCdd_pref_nodes_Base::CCdd_pref_nodes_Base (void)
virtual	CCdd_pref_nodes_Base::~CCdd_pref_nodes_Base (void)
	CCdd_pref_nodes_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_pref_nodes_Base::IsSetPreferred_nodes (void) const
	Check if a value has been assigned to Preferred_nodes data member. More...
bool	CCdd_pref_nodes_Base::CanGetPreferred_nodes (void) const
	Check if it is safe to call GetPreferred_nodes method. More...
void	CCdd_pref_nodes_Base::ResetPreferred_nodes (void)
	Reset Preferred_nodes data member. More...
const TPreferred_nodes &	CCdd_pref_nodes_Base::GetPreferred_nodes (void) const
	Get the Preferred_nodes member data. More...
void	CCdd_pref_nodes_Base::SetPreferred_nodes (TPreferred_nodes &value)
	Assign a value to Preferred_nodes data member. More...
TPreferred_nodes &	CCdd_pref_nodes_Base::SetPreferred_nodes (void)
	Assign a value to Preferred_nodes data member. More...
bool	CCdd_pref_nodes_Base::IsSetModel_organisms (void) const
	Check if a value has been assigned to Model_organisms data member. More...
bool	CCdd_pref_nodes_Base::CanGetModel_organisms (void) const
	Check if it is safe to call GetModel_organisms method. More...
void	CCdd_pref_nodes_Base::ResetModel_organisms (void)
	Reset Model_organisms data member. More...
const TModel_organisms &	CCdd_pref_nodes_Base::GetModel_organisms (void) const
	Get the Model_organisms member data. More...
void	CCdd_pref_nodes_Base::SetModel_organisms (TModel_organisms &value)
	Assign a value to Model_organisms data member. More...
TModel_organisms &	CCdd_pref_nodes_Base::SetModel_organisms (void)
	Assign a value to Model_organisms data member. More...
bool	CCdd_pref_nodes_Base::IsSetOptional_nodes (void) const
	Check if a value has been assigned to Optional_nodes data member. More...
bool	CCdd_pref_nodes_Base::CanGetOptional_nodes (void) const
	Check if it is safe to call GetOptional_nodes method. More...
void	CCdd_pref_nodes_Base::ResetOptional_nodes (void)
	Reset Optional_nodes data member. More...
const TOptional_nodes &	CCdd_pref_nodes_Base::GetOptional_nodes (void) const
	Get the Optional_nodes member data. More...
void	CCdd_pref_nodes_Base::SetOptional_nodes (TOptional_nodes &value)
	Assign a value to Optional_nodes data member. More...
TOptional_nodes &	CCdd_pref_nodes_Base::SetOptional_nodes (void)
	Assign a value to Optional_nodes data member. More...
bool	CCdd_pref_nodes_Base::IsSetDescription (void) const
	Check if a value has been assigned to Description data member. More...
bool	CCdd_pref_nodes_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CCdd_pref_nodes_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CCdd_pref_nodes_Base::GetDescription (void) const
	Get the Description member data. More...
void	CCdd_pref_nodes_Base::SetDescription (TDescription &value)
	Assign a value to Description data member. More...
TDescription &	CCdd_pref_nodes_Base::SetDescription (void)
	Assign a value to Description data member. More...
virtual void	CCdd_pref_nodes_Base::Reset (void)
	Reset the whole object. More...
	CCdd_pref_nodes_Base::CCdd_pref_nodes_Base (const CCdd_pref_nodes_Base &)
CCdd_pref_nodes_Base &	CCdd_pref_nodes_Base::operator= (const CCdd_pref_nodes_Base &)
	CCdd_Project::CCdd_Project (void)
	CCdd_Project::~CCdd_Project (void)
	CCdd_Project::CCdd_Project (const CCdd_Project &value)
CCdd_Project &	CCdd_Project::operator= (const CCdd_Project &value)
	CCdd_Project_Base::CCdd_Project_Base (void)
virtual	CCdd_Project_Base::~CCdd_Project_Base (void)
	CCdd_Project_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_Project_Base::IsSetCds (void) const
	cds Check if a value has been assigned to Cds data member. More...
bool	CCdd_Project_Base::CanGetCds (void) const
	Check if it is safe to call GetCds method. More...
void	CCdd_Project_Base::ResetCds (void)
	Reset Cds data member. More...
const TCds &	CCdd_Project_Base::GetCds (void) const
	Get the Cds member data. More...
TCds &	CCdd_Project_Base::SetCds (void)
	Assign a value to Cds data member. More...
bool	CCdd_Project_Base::IsSetCdcolor (void) const
	colors Check if a value has been assigned to Cdcolor data member. More...
bool	CCdd_Project_Base::CanGetCdcolor (void) const
	Check if it is safe to call GetCdcolor method. More...
void	CCdd_Project_Base::ResetCdcolor (void)
	Reset Cdcolor data member. More...
const TCdcolor &	CCdd_Project_Base::GetCdcolor (void) const
	Get the Cdcolor member data. More...
TCdcolor &	CCdd_Project_Base::SetCdcolor (void)
	Assign a value to Cdcolor data member. More...
bool	CCdd_Project_Base::IsSetViewers (void) const
	Sequence viewers Check if a value has been assigned to Viewers data member. More...
bool	CCdd_Project_Base::CanGetViewers (void) const
	Check if it is safe to call GetViewers method. More...
void	CCdd_Project_Base::ResetViewers (void)
	Reset Viewers data member. More...
const TViewers &	CCdd_Project_Base::GetViewers (void) const
	Get the Viewers member data. More...
TViewers &	CCdd_Project_Base::SetViewers (void)
	Assign a value to Viewers data member. More...
bool	CCdd_Project_Base::IsSetLog (void) const
	log Check if a value has been assigned to Log data member. More...
bool	CCdd_Project_Base::CanGetLog (void) const
	Check if it is safe to call GetLog method. More...
void	CCdd_Project_Base::ResetLog (void)
	Reset Log data member. More...
const TLog &	CCdd_Project_Base::GetLog (void) const
	Get the Log member data. More...
void	CCdd_Project_Base::SetLog (const TLog &value)
	Assign a value to Log data member. More...
void	CCdd_Project_Base::SetLog (TLog &&value)
TLog &	CCdd_Project_Base::SetLog (void)
	Assign a value to Log data member. More...
bool	CCdd_Project_Base::IsSetScripts (void) const
	command scripts Check if a value has been assigned to Scripts data member. More...
bool	CCdd_Project_Base::CanGetScripts (void) const
	Check if it is safe to call GetScripts method. More...
void	CCdd_Project_Base::ResetScripts (void)
	Reset Scripts data member. More...
const TScripts &	CCdd_Project_Base::GetScripts (void) const
	Get the Scripts member data. More...
TScripts &	CCdd_Project_Base::SetScripts (void)
	Assign a value to Scripts data member. More...
bool	CCdd_Project_Base::IsSetId (void) const
	to assign unique project id Check if a value has been assigned to Id data member. More...
bool	CCdd_Project_Base::CanGetId (void) const
	Check if it is safe to call GetId method. More...
void	CCdd_Project_Base::ResetId (void)
	Reset Id data member. More...
const TId &	CCdd_Project_Base::GetId (void) const
	Get the Id member data. More...
void	CCdd_Project_Base::SetId (TId &value)
	Assign a value to Id data member. More...
TId &	CCdd_Project_Base::SetId (void)
	Assign a value to Id data member. More...
bool	CCdd_Project_Base::IsSetRids (void) const
	to store request IDs for batch CD-Searches Check if a value has been assigned to Rids data member. More...
bool	CCdd_Project_Base::CanGetRids (void) const
	Check if it is safe to call GetRids method. More...
void	CCdd_Project_Base::ResetRids (void)
	Reset Rids data member. More...
const TRids &	CCdd_Project_Base::GetRids (void) const
	Get the Rids member data. More...
TRids &	CCdd_Project_Base::SetRids (void)
	Assign a value to Rids data member. More...
bool	CCdd_Project_Base::IsSetCreate_date (void) const
	Check if a value has been assigned to Create_date data member. More...
bool	CCdd_Project_Base::CanGetCreate_date (void) const
	Check if it is safe to call GetCreate_date method. More...
void	CCdd_Project_Base::ResetCreate_date (void)
	Reset Create_date data member. More...
const TCreate_date &	CCdd_Project_Base::GetCreate_date (void) const
	Get the Create_date member data. More...
void	CCdd_Project_Base::SetCreate_date (TCreate_date &value)
	Assign a value to Create_date data member. More...
TCreate_date &	CCdd_Project_Base::SetCreate_date (void)
	Assign a value to Create_date data member. More...
bool	CCdd_Project_Base::IsSetUpdate_date (void) const
	Check if a value has been assigned to Update_date data member. More...
bool	CCdd_Project_Base::CanGetUpdate_date (void) const
	Check if it is safe to call GetUpdate_date method. More...
void	CCdd_Project_Base::ResetUpdate_date (void)
	Reset Update_date data member. More...
const TUpdate_date &	CCdd_Project_Base::GetUpdate_date (void) const
	Get the Update_date member data. More...
void	CCdd_Project_Base::SetUpdate_date (TUpdate_date &value)
	Assign a value to Update_date data member. More...
TUpdate_date &	CCdd_Project_Base::SetUpdate_date (void)
	Assign a value to Update_date data member. More...
bool	CCdd_Project_Base::IsSetProject_id (void) const
	for temporary tracking in the database Check if a value has been assigned to Project_id data member. More...
bool	CCdd_Project_Base::CanGetProject_id (void) const
	Check if it is safe to call GetProject_id method. More...
void	CCdd_Project_Base::ResetProject_id (void)
	Reset Project_id data member. More...
TProject_id	CCdd_Project_Base::GetProject_id (void) const
	Get the Project_id member data. More...
void	CCdd_Project_Base::SetProject_id (TProject_id value)
	Assign a value to Project_id data member. More...
TProject_id &	CCdd_Project_Base::SetProject_id (void)
	Assign a value to Project_id data member. More...
virtual void	CCdd_Project_Base::Reset (void)
	Reset the whole object. More...
	CCdd_Project_Base::CCdd_Project_Base (const CCdd_Project_Base &)
CCdd_Project_Base &	CCdd_Project_Base::operator= (const CCdd_Project_Base &)
	CCdd_repeat::CCdd_repeat (void)
	CCdd_repeat::~CCdd_repeat (void)
	CCdd_repeat::CCdd_repeat (const CCdd_repeat &value)
CCdd_repeat &	CCdd_repeat::operator= (const CCdd_repeat &value)
	CCdd_repeat_Base::CCdd_repeat_Base (void)
virtual	CCdd_repeat_Base::~CCdd_repeat_Base (void)
	CCdd_repeat_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_repeat_Base::IsSetCount (void) const
	number of tandem repeats in the CD Check if a value has been assigned to Count data member. More...
bool	CCdd_repeat_Base::CanGetCount (void) const
	Check if it is safe to call GetCount method. More...
void	CCdd_repeat_Base::ResetCount (void)
	Reset Count data member. More...
TCount	CCdd_repeat_Base::GetCount (void) const
	Get the Count member data. More...
void	CCdd_repeat_Base::SetCount (TCount value)
	Assign a value to Count data member. More...
TCount &	CCdd_repeat_Base::SetCount (void)
	Assign a value to Count data member. More...
bool	CCdd_repeat_Base::IsSetLocation (void) const
	location on the representative Check if a value has been assigned to Location data member. More...
bool	CCdd_repeat_Base::CanGetLocation (void) const
	Check if it is safe to call GetLocation method. More...
void	CCdd_repeat_Base::ResetLocation (void)
	Reset Location data member. More...
const TLocation &	CCdd_repeat_Base::GetLocation (void) const
	Get the Location member data. More...
void	CCdd_repeat_Base::SetLocation (TLocation &value)
	Assign a value to Location data member. More...
TLocation &	CCdd_repeat_Base::SetLocation (void)
	Assign a value to Location data member. More...
bool	CCdd_repeat_Base::IsSetAvglen (void) const
	average repeat length Check if a value has been assigned to Avglen data member. More...
bool	CCdd_repeat_Base::CanGetAvglen (void) const
	Check if it is safe to call GetAvglen method. More...
void	CCdd_repeat_Base::ResetAvglen (void)
	Reset Avglen data member. More...
TAvglen	CCdd_repeat_Base::GetAvglen (void) const
	Get the Avglen member data. More...
void	CCdd_repeat_Base::SetAvglen (TAvglen value)
	Assign a value to Avglen data member. More...
TAvglen &	CCdd_repeat_Base::SetAvglen (void)
	Assign a value to Avglen data member. More...
virtual void	CCdd_repeat_Base::Reset (void)
	Reset the whole object. More...
	CCdd_repeat_Base::CCdd_repeat_Base (const CCdd_repeat_Base &)
CCdd_repeat_Base &	CCdd_repeat_Base::operator= (const CCdd_repeat_Base &)
	CCdd_Script::CCdd_Script (void)
	CCdd_Script::~CCdd_Script (void)
	CCdd_Script::CCdd_Script (const CCdd_Script &value)
CCdd_Script &	CCdd_Script::operator= (const CCdd_Script &value)
	CCdd_Script_Base::CCdd_Script_Base (void)
virtual	CCdd_Script_Base::~CCdd_Script_Base (void)
	CCdd_Script_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_Script_Base::EType (void)
	Access to EType's attributes (values, names) as defined in spec. More...
bool	CCdd_Script_Base::IsSetType (void) const
	Check if a value has been assigned to Type data member. More...
bool	CCdd_Script_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CCdd_Script_Base::ResetType (void)
	Reset Type data member. More...
TType	CCdd_Script_Base::GetType (void) const
	Get the Type member data. More...
void	CCdd_Script_Base::SetType (TType value)
	Assign a value to Type data member. More...
TType &	CCdd_Script_Base::SetType (void)
	Assign a value to Type data member. More...
bool	CCdd_Script_Base::IsSetName (void) const
	user assigned name/description Check if a value has been assigned to Name data member. More...
bool	CCdd_Script_Base::CanGetName (void) const
	Check if it is safe to call GetName method. More...
void	CCdd_Script_Base::ResetName (void)
	Reset Name data member. More...
const TName &	CCdd_Script_Base::GetName (void) const
	Get the Name member data. More...
void	CCdd_Script_Base::SetName (const TName &value)
	Assign a value to Name data member. More...
void	CCdd_Script_Base::SetName (TName &&value)
TName &	CCdd_Script_Base::SetName (void)
	Assign a value to Name data member. More...
bool	CCdd_Script_Base::IsSetCommands (void) const
	actual script commands Check if a value has been assigned to Commands data member. More...
bool	CCdd_Script_Base::CanGetCommands (void) const
	Check if it is safe to call GetCommands method. More...
void	CCdd_Script_Base::ResetCommands (void)
	Reset Commands data member. More...
const TCommands &	CCdd_Script_Base::GetCommands (void) const
	Get the Commands member data. More...
void	CCdd_Script_Base::SetCommands (const TCommands &value)
	Assign a value to Commands data member. More...
void	CCdd_Script_Base::SetCommands (TCommands &&value)
TCommands &	CCdd_Script_Base::SetCommands (void)
	Assign a value to Commands data member. More...
virtual void	CCdd_Script_Base::Reset (void)
	Reset the whole object. More...
	CCdd_Script_Base::CCdd_Script_Base (const CCdd_Script_Base &)
CCdd_Script_Base &	CCdd_Script_Base::operator= (const CCdd_Script_Base &)
	CCdd_set::CCdd_set (void)
	CCdd_set::~CCdd_set (void)
	CCdd_set::CCdd_set (const CCdd_set &value)
CCdd_set &	CCdd_set::operator= (const CCdd_set &value)
	CCdd_set_Base::CCdd_set_Base (void)
virtual	CCdd_set_Base::~CCdd_set_Base (void)
	CCdd_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_set_Base::CCdd_set_Base (const CCdd_set_Base &)
CCdd_set_Base &	CCdd_set_Base::operator= (const CCdd_set_Base &)
	CCdd_tree::CCdd_tree (void)
	CCdd_tree::~CCdd_tree (void)
	CCdd_tree::CCdd_tree (const CCdd_tree &value)
CCdd_tree &	CCdd_tree::operator= (const CCdd_tree &value)
	CCdd_tree_Base::CCdd_tree_Base (void)
virtual	CCdd_tree_Base::~CCdd_tree_Base (void)
	CCdd_tree_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_tree_Base::IsSetName (void) const
	short name copied from CD Check if a value has been assigned to Name data member. More...
bool	CCdd_tree_Base::CanGetName (void) const
	Check if it is safe to call GetName method. More...
void	CCdd_tree_Base::ResetName (void)
	Reset Name data member. More...
const TName &	CCdd_tree_Base::GetName (void) const
	Get the Name member data. More...
void	CCdd_tree_Base::SetName (const TName &value)
	Assign a value to Name data member. More...
void	CCdd_tree_Base::SetName (TName &&value)
TName &	CCdd_tree_Base::SetName (void)
	Assign a value to Name data member. More...
bool	CCdd_tree_Base::IsSetId (void) const
	IDs copied from CD Check if a value has been assigned to Id data member. More...
bool	CCdd_tree_Base::CanGetId (void) const
	Check if it is safe to call GetId method. More...
void	CCdd_tree_Base::ResetId (void)
	Reset Id data member. More...
const TId &	CCdd_tree_Base::GetId (void) const
	Get the Id member data. More...
void	CCdd_tree_Base::SetId (TId &value)
	Assign a value to Id data member. More...
TId &	CCdd_tree_Base::SetId (void)
	Assign a value to Id data member. More...
bool	CCdd_tree_Base::IsSetDescription (void) const
	description copied from CD Check if a value has been assigned to Description data member. More...
bool	CCdd_tree_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CCdd_tree_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CCdd_tree_Base::GetDescription (void) const
	Get the Description member data. More...
void	CCdd_tree_Base::SetDescription (TDescription &value)
	Assign a value to Description data member. More...
TDescription &	CCdd_tree_Base::SetDescription (void)
	Assign a value to Description data member. More...
bool	CCdd_tree_Base::IsSetParent (void) const
	CD is the result of a split/merge Check if a value has been assigned to Parent data member. More...
bool	CCdd_tree_Base::CanGetParent (void) const
	Check if it is safe to call GetParent method. More...
void	CCdd_tree_Base::ResetParent (void)
	Reset Parent data member. More...
const TParent &	CCdd_tree_Base::GetParent (void) const
	Get the Parent member data. More...
void	CCdd_tree_Base::SetParent (TParent &value)
	Assign a value to Parent data member. More...
TParent &	CCdd_tree_Base::SetParent (void)
	Assign a value to Parent data member. More...
bool	CCdd_tree_Base::IsSetChildren (void) const
	this CD has been split Check if a value has been assigned to Children data member. More...
bool	CCdd_tree_Base::CanGetChildren (void) const
	Check if it is safe to call GetChildren method. More...
void	CCdd_tree_Base::ResetChildren (void)
	Reset Children data member. More...
const TChildren &	CCdd_tree_Base::GetChildren (void) const
	Get the Children member data. More...
void	CCdd_tree_Base::SetChildren (TChildren &value)
	Assign a value to Children data member. More...
TChildren &	CCdd_tree_Base::SetChildren (void)
	Assign a value to Children data member. More...
bool	CCdd_tree_Base::IsSetSiblings (void) const
	related CDs (have common hits) Check if a value has been assigned to Siblings data member. More...
bool	CCdd_tree_Base::CanGetSiblings (void) const
	Check if it is safe to call GetSiblings method. More...
void	CCdd_tree_Base::ResetSiblings (void)
	Reset Siblings data member. More...
const TSiblings &	CCdd_tree_Base::GetSiblings (void) const
	Get the Siblings member data. More...
void	CCdd_tree_Base::SetSiblings (TSiblings &value)
	Assign a value to Siblings data member. More...
TSiblings &	CCdd_tree_Base::SetSiblings (void)
	Assign a value to Siblings data member. More...
bool	CCdd_tree_Base::IsSetNeighbors (void) const
	co-occurring CDs (non-overlapping hits to same sequences) Check if a value has been assigned to Neighbors data member. More...
bool	CCdd_tree_Base::CanGetNeighbors (void) const
	Check if it is safe to call GetNeighbors method. More...
void	CCdd_tree_Base::ResetNeighbors (void)
	Reset Neighbors data member. More...
const TNeighbors &	CCdd_tree_Base::GetNeighbors (void) const
	Get the Neighbors member data. More...
void	CCdd_tree_Base::SetNeighbors (TNeighbors &value)
	Assign a value to Neighbors data member. More...
TNeighbors &	CCdd_tree_Base::SetNeighbors (void)
	Assign a value to Neighbors data member. More...
virtual void	CCdd_tree_Base::Reset (void)
	Reset the whole object. More...
	CCdd_tree_Base::CCdd_tree_Base (const CCdd_tree_Base &)
CCdd_tree_Base &	CCdd_tree_Base::operator= (const CCdd_tree_Base &)
	CCdd_tree_set::CCdd_tree_set (void)
	CCdd_tree_set::~CCdd_tree_set (void)
	CCdd_tree_set::CCdd_tree_set (const CCdd_tree_set &value)
CCdd_tree_set &	CCdd_tree_set::operator= (const CCdd_tree_set &value)
	CCdd_tree_set_Base::CCdd_tree_set_Base (void)
virtual	CCdd_tree_set_Base::~CCdd_tree_set_Base (void)
	CCdd_tree_set_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_tree_set_Base::IsSet (void) const
	Check if a value has been assigned to data member. More...
bool	CCdd_tree_set_Base::CanGet (void) const
	Check if it is safe to call Get method. More...
void	CCdd_tree_set_Base::Reset (void)
	Reset data member. More...
const Tdata &	CCdd_tree_set_Base::Get (void) const
	Get the member data. More...
Tdata &	CCdd_tree_set_Base::Set (void)
	Assign a value to data member. More...
	CCdd_tree_set_Base::operator const Tdata & (void) const
	Conversion operator to 'const Tdata' type. More...
	CCdd_tree_set_Base::operator Tdata & (void)
	Conversion operator to 'Tdata' type. More...
	CCdd_tree_set_Base::CCdd_tree_set_Base (const CCdd_tree_set_Base &)
CCdd_tree_set_Base &	CCdd_tree_set_Base::operator= (const CCdd_tree_set_Base &)
	CCdd_Viewer::CCdd_Viewer (void)
	CCdd_Viewer::~CCdd_Viewer (void)
	CCdd_Viewer::CCdd_Viewer (const CCdd_Viewer &value)
CCdd_Viewer &	CCdd_Viewer::operator= (const CCdd_Viewer &value)
	CCdd_Viewer_Base::CCdd_Viewer_Base (void)
virtual	CCdd_Viewer_Base::~CCdd_Viewer_Base (void)
	CCdd_Viewer_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CCdd_Viewer_Base::ECtrl (void)
	Access to ECtrl's attributes (values, names) as defined in spec. More...
bool	CCdd_Viewer_Base::IsSetCtrl (void) const
	Check if a value has been assigned to Ctrl data member. More...
bool	CCdd_Viewer_Base::CanGetCtrl (void) const
	Check if it is safe to call GetCtrl method. More...
void	CCdd_Viewer_Base::ResetCtrl (void)
	Reset Ctrl data member. More...
TCtrl	CCdd_Viewer_Base::GetCtrl (void) const
	Get the Ctrl member data. More...
void	CCdd_Viewer_Base::SetCtrl (TCtrl value)
	Assign a value to Ctrl data member. More...
TCtrl &	CCdd_Viewer_Base::SetCtrl (void)
	Assign a value to Ctrl data member. More...
bool	CCdd_Viewer_Base::IsSetRect (void) const
	viewer rectangle Check if a value has been assigned to Rect data member. More...
bool	CCdd_Viewer_Base::CanGetRect (void) const
	Check if it is safe to call GetRect method. More...
void	CCdd_Viewer_Base::ResetRect (void)
	Reset Rect data member. More...
const TRect &	CCdd_Viewer_Base::GetRect (void) const
	Get the Rect member data. More...
void	CCdd_Viewer_Base::SetRect (TRect &value)
	Assign a value to Rect data member. More...
TRect &	CCdd_Viewer_Base::SetRect (void)
	Assign a value to Rect data member. More...
bool	CCdd_Viewer_Base::IsSetAccessions (void) const
	list of accessions associated with a viewer Check if a value has been assigned to Accessions data member. More...
bool	CCdd_Viewer_Base::CanGetAccessions (void) const
	Check if it is safe to call GetAccessions method. More...
void	CCdd_Viewer_Base::ResetAccessions (void)
	Reset Accessions data member. More...
const TAccessions &	CCdd_Viewer_Base::GetAccessions (void) const
	Get the Accessions member data. More...
TAccessions &	CCdd_Viewer_Base::SetAccessions (void)
	Assign a value to Accessions data member. More...
virtual void	CCdd_Viewer_Base::Reset (void)
	Reset the whole object. More...
	CCdd_Viewer_Base::CCdd_Viewer_Base (const CCdd_Viewer_Base &)
CCdd_Viewer_Base &	CCdd_Viewer_Base::operator= (const CCdd_Viewer_Base &)
	CCdd_Viewer_Rect::CCdd_Viewer_Rect (void)
	CCdd_Viewer_Rect::~CCdd_Viewer_Rect (void)
	CCdd_Viewer_Rect::CCdd_Viewer_Rect (const CCdd_Viewer_Rect &value)
CCdd_Viewer_Rect &	CCdd_Viewer_Rect::operator= (const CCdd_Viewer_Rect &value)
	CCdd_Viewer_Rect_Base::CCdd_Viewer_Rect_Base (void)
virtual	CCdd_Viewer_Rect_Base::~CCdd_Viewer_Rect_Base (void)
	CCdd_Viewer_Rect_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCdd_Viewer_Rect_Base::IsSetTop (void) const
	top coordinate Check if a value has been assigned to Top data member. More...
bool	CCdd_Viewer_Rect_Base::CanGetTop (void) const
	Check if it is safe to call GetTop method. More...
void	CCdd_Viewer_Rect_Base::ResetTop (void)
	Reset Top data member. More...
TTop	CCdd_Viewer_Rect_Base::GetTop (void) const
	Get the Top member data. More...
void	CCdd_Viewer_Rect_Base::SetTop (TTop value)
	Assign a value to Top data member. More...
TTop &	CCdd_Viewer_Rect_Base::SetTop (void)
	Assign a value to Top data member. More...
bool	CCdd_Viewer_Rect_Base::IsSetLeft (void) const
	left coordinate Check if a value has been assigned to Left data member. More...
bool	CCdd_Viewer_Rect_Base::CanGetLeft (void) const
	Check if it is safe to call GetLeft method. More...
void	CCdd_Viewer_Rect_Base::ResetLeft (void)
	Reset Left data member. More...
TLeft	CCdd_Viewer_Rect_Base::GetLeft (void) const
	Get the Left member data. More...
void	CCdd_Viewer_Rect_Base::SetLeft (TLeft value)
	Assign a value to Left data member. More...
TLeft &	CCdd_Viewer_Rect_Base::SetLeft (void)
	Assign a value to Left data member. More...
bool	CCdd_Viewer_Rect_Base::IsSetWidth (void) const
	width Check if a value has been assigned to Width data member. More...
bool	CCdd_Viewer_Rect_Base::CanGetWidth (void) const
	Check if it is safe to call GetWidth method. More...
void	CCdd_Viewer_Rect_Base::ResetWidth (void)
	Reset Width data member. More...
TWidth	CCdd_Viewer_Rect_Base::GetWidth (void) const
	Get the Width member data. More...
void	CCdd_Viewer_Rect_Base::SetWidth (TWidth value)
	Assign a value to Width data member. More...
TWidth &	CCdd_Viewer_Rect_Base::SetWidth (void)
	Assign a value to Width data member. More...
bool	CCdd_Viewer_Rect_Base::IsSetHeight (void) const
	height Check if a value has been assigned to Height data member. More...
bool	CCdd_Viewer_Rect_Base::CanGetHeight (void) const
	Check if it is safe to call GetHeight method. More...
void	CCdd_Viewer_Rect_Base::ResetHeight (void)
	Reset Height data member. More...
THeight	CCdd_Viewer_Rect_Base::GetHeight (void) const
	Get the Height member data. More...
void	CCdd_Viewer_Rect_Base::SetHeight (THeight value)
	Assign a value to Height data member. More...
THeight &	CCdd_Viewer_Rect_Base::SetHeight (void)
	Assign a value to Height data member. More...
virtual void	CCdd_Viewer_Rect_Base::Reset (void)
	Reset the whole object. More...
	CCdd_Viewer_Rect_Base::CCdd_Viewer_Rect_Base (const CCdd_Viewer_Rect_Base &)
CCdd_Viewer_Rect_Base &	CCdd_Viewer_Rect_Base::operator= (const CCdd_Viewer_Rect_Base &)
	CDomain_parent::CDomain_parent (void)
	CDomain_parent::~CDomain_parent (void)
	CDomain_parent::CDomain_parent (const CDomain_parent &value)
CDomain_parent &	CDomain_parent::operator= (const CDomain_parent &value)
	CDomain_parent_Base::CDomain_parent_Base (void)
virtual	CDomain_parent_Base::~CDomain_parent_Base (void)
	CDomain_parent_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CDomain_parent_Base::EParent_type (void)
	Access to EParent_type's attributes (values, names) as defined in spec. More...
bool	CDomain_parent_Base::IsSetParent_type (void) const
	Check if a value has been assigned to Parent_type data member. More...
bool	CDomain_parent_Base::CanGetParent_type (void) const
	Check if it is safe to call GetParent_type method. More...
void	CDomain_parent_Base::ResetParent_type (void)
	Reset Parent_type data member. More...
TParent_type	CDomain_parent_Base::GetParent_type (void) const
	Get the Parent_type member data. More...
void	CDomain_parent_Base::SetParent_type (TParent_type value)
	Assign a value to Parent_type data member. More...
TParent_type &	CDomain_parent_Base::SetParent_type (void)
	Assign a value to Parent_type data member. More...
bool	CDomain_parent_Base::IsSetParentid (void) const
	identify the section parent by accession Check if a value has been assigned to Parentid data member. More...
bool	CDomain_parent_Base::CanGetParentid (void) const
	Check if it is safe to call GetParentid method. More...
void	CDomain_parent_Base::ResetParentid (void)
	Reset Parentid data member. More...
const TParentid &	CDomain_parent_Base::GetParentid (void) const
	Get the Parentid member data. More...
void	CDomain_parent_Base::SetParentid (TParentid &value)
	Assign a value to Parentid data member. More...
TParentid &	CDomain_parent_Base::SetParentid (void)
	Assign a value to Parentid data member. More...
bool	CDomain_parent_Base::IsSetSeqannot (void) const
	contains the sequence alignment linking CD alignment models, should align the masters/representatives of each CD Check if a value has been assigned to Seqannot data member. More...
bool	CDomain_parent_Base::CanGetSeqannot (void) const
	Check if it is safe to call GetSeqannot method. More...
void	CDomain_parent_Base::ResetSeqannot (void)
	Reset Seqannot data member. More...
const TSeqannot &	CDomain_parent_Base::GetSeqannot (void) const
	Get the Seqannot member data. More...
void	CDomain_parent_Base::SetSeqannot (TSeqannot &value)
	Assign a value to Seqannot data member. More...
TSeqannot &	CDomain_parent_Base::SetSeqannot (void)
	Assign a value to Seqannot data member. More...
virtual void	CDomain_parent_Base::Reset (void)
	Reset the whole object. More...
	CDomain_parent_Base::CDomain_parent_Base (const CDomain_parent_Base &)
CDomain_parent_Base &	CDomain_parent_Base::operator= (const CDomain_parent_Base &)
	CFeature_evidence::CFeature_evidence (void)
	CFeature_evidence::~CFeature_evidence (void)
	CFeature_evidence::CFeature_evidence (const CFeature_evidence &value)
CFeature_evidence &	CFeature_evidence::operator= (const CFeature_evidence &value)
	CFeature_evidence_Base::CFeature_evidence_Base (void)
virtual	CFeature_evidence_Base::~CFeature_evidence_Base (void)
	CFeature_evidence_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CFeature_evidence_Base::Reset (void)
	Reset the whole object. More...
virtual void	CFeature_evidence_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CFeature_evidence_Base::Which (void) const
	Which variant is currently selected. More...
void	CFeature_evidence_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CFeature_evidence_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CFeature_evidence_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CFeature_evidence_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CFeature_evidence_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CFeature_evidence_Base::IsComment (void) const
	Check if variant Comment is selected. More...
const TComment &	CFeature_evidence_Base::GetComment (void) const
	Get the variant data. More...
TComment &	CFeature_evidence_Base::SetComment (void)
	Select the variant. More...
void	CFeature_evidence_Base::SetComment (const TComment &value)
	Select the variant and set its data. More...
bool	CFeature_evidence_Base::IsReference (void) const
	Check if variant Reference is selected. More...
const TReference &	CFeature_evidence_Base::GetReference (void) const
	Get the variant data. More...
TReference &	CFeature_evidence_Base::SetReference (void)
	Select the variant. More...
void	CFeature_evidence_Base::SetReference (TReference &value)
	Select the variant and set its data. More...
bool	CFeature_evidence_Base::IsBsannot (void) const
	Check if variant Bsannot is selected. More...
const TBsannot &	CFeature_evidence_Base::GetBsannot (void) const
	Get the variant data. More...
TBsannot &	CFeature_evidence_Base::SetBsannot (void)
	Select the variant. More...
void	CFeature_evidence_Base::SetBsannot (TBsannot &value)
	Select the variant and set its data. More...
bool	CFeature_evidence_Base::IsSeqfeat (void) const
	Check if variant Seqfeat is selected. More...
const TSeqfeat &	CFeature_evidence_Base::GetSeqfeat (void) const
	Get the variant data. More...
TSeqfeat &	CFeature_evidence_Base::SetSeqfeat (void)
	Select the variant. More...
void	CFeature_evidence_Base::SetSeqfeat (TSeqfeat &value)
	Select the variant and set its data. More...
bool	CFeature_evidence_Base::IsBook_ref (void) const
	Check if variant Book_ref is selected. More...
const TBook_ref &	CFeature_evidence_Base::GetBook_ref (void) const
	Get the variant data. More...
TBook_ref &	CFeature_evidence_Base::SetBook_ref (void)
	Select the variant. More...
void	CFeature_evidence_Base::SetBook_ref (TBook_ref &value)
	Select the variant and set its data. More...
	CFeature_evidence_Base::CFeature_evidence_Base (const CFeature_evidence_Base &)
CFeature_evidence_Base &	CFeature_evidence_Base::operator= (const CFeature_evidence_Base &)
void	CFeature_evidence_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CGlobal_id::CGlobal_id (void)
	CGlobal_id::~CGlobal_id (void)
	CGlobal_id::CGlobal_id (const CGlobal_id &value)
CGlobal_id &	CGlobal_id::operator= (const CGlobal_id &value)
	CGlobal_id_Base::CGlobal_id_Base (void)
virtual	CGlobal_id_Base::~CGlobal_id_Base (void)
	CGlobal_id_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CGlobal_id_Base::IsSetAccession (void) const
	SMART, Pfam, LOAD or CD accession Check if a value has been assigned to Accession data member. More...
bool	CGlobal_id_Base::CanGetAccession (void) const
	Check if it is safe to call GetAccession method. More...
void	CGlobal_id_Base::ResetAccession (void)
	Reset Accession data member. More...
const TAccession &	CGlobal_id_Base::GetAccession (void) const
	Get the Accession member data. More...
void	CGlobal_id_Base::SetAccession (const TAccession &value)
	Assign a value to Accession data member. More...
void	CGlobal_id_Base::SetAccession (TAccession &&value)
TAccession &	CGlobal_id_Base::SetAccession (void)
	Assign a value to Accession data member. More...
bool	CGlobal_id_Base::IsSetRelease (void) const
	to hold CD-Database release number if desired, currently not used Check if a value has been assigned to Release data member. More...
bool	CGlobal_id_Base::CanGetRelease (void) const
	Check if it is safe to call GetRelease method. More...
void	CGlobal_id_Base::ResetRelease (void)
	Reset Release data member. More...
const TRelease &	CGlobal_id_Base::GetRelease (void) const
	Get the Release member data. More...
void	CGlobal_id_Base::SetRelease (const TRelease &value)
	Assign a value to Release data member. More...
void	CGlobal_id_Base::SetRelease (TRelease &&value)
TRelease &	CGlobal_id_Base::SetRelease (void)
	Assign a value to Release data member. More...
bool	CGlobal_id_Base::IsSetVersion (void) const
	version 0 is the seed, version numbers increase with update/curate cycles Check if a value has been assigned to Version data member. More...
bool	CGlobal_id_Base::CanGetVersion (void) const
	Check if it is safe to call GetVersion method. More...
void	CGlobal_id_Base::ResetVersion (void)
	Reset Version data member. More...
TVersion	CGlobal_id_Base::GetVersion (void) const
	Get the Version member data. More...
void	CGlobal_id_Base::SetVersion (TVersion value)
	Assign a value to Version data member. More...
TVersion &	CGlobal_id_Base::SetVersion (void)
	Assign a value to Version data member. More...
bool	CGlobal_id_Base::IsSetDatabase (void) const
	this is NOT the source!, rather the Check if a value has been assigned to Database data member. More...
bool	CGlobal_id_Base::CanGetDatabase (void) const
	Check if it is safe to call GetDatabase method. More...
void	CGlobal_id_Base::ResetDatabase (void)
	Reset Database data member. More...
const TDatabase &	CGlobal_id_Base::GetDatabase (void) const
	Get the Database member data. More...
void	CGlobal_id_Base::SetDatabase (const TDatabase &value)
	Assign a value to Database data member. More...
void	CGlobal_id_Base::SetDatabase (TDatabase &&value)
TDatabase &	CGlobal_id_Base::SetDatabase (void)
	Assign a value to Database data member. More...
virtual void	CGlobal_id_Base::Reset (void)
	Reset the whole object. More...
	CGlobal_id_Base::CGlobal_id_Base (const CGlobal_id_Base &)
CGlobal_id_Base &	CGlobal_id_Base::operator= (const CGlobal_id_Base &)
	CMatrix::CMatrix (void)
	CMatrix::~CMatrix (void)
	CMatrix::CMatrix (const CMatrix &value)
CMatrix &	CMatrix::operator= (const CMatrix &value)
	CMatrix_Base::CMatrix_Base (void)
virtual	CMatrix_Base::~CMatrix_Base (void)
	CMatrix_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CMatrix_Base::IsSetNcolumns (void) const
	Check if a value has been assigned to Ncolumns data member. More...
bool	CMatrix_Base::CanGetNcolumns (void) const
	Check if it is safe to call GetNcolumns method. More...
void	CMatrix_Base::ResetNcolumns (void)
	Reset Ncolumns data member. More...
TNcolumns	CMatrix_Base::GetNcolumns (void) const
	Get the Ncolumns member data. More...
void	CMatrix_Base::SetNcolumns (TNcolumns value)
	Assign a value to Ncolumns data member. More...
TNcolumns &	CMatrix_Base::SetNcolumns (void)
	Assign a value to Ncolumns data member. More...
bool	CMatrix_Base::IsSetNrows (void) const
	Check if a value has been assigned to Nrows data member. More...
bool	CMatrix_Base::CanGetNrows (void) const
	Check if it is safe to call GetNrows method. More...
void	CMatrix_Base::ResetNrows (void)
	Reset Nrows data member. More...
TNrows	CMatrix_Base::GetNrows (void) const
	Get the Nrows member data. More...
void	CMatrix_Base::SetNrows (TNrows value)
	Assign a value to Nrows data member. More...
TNrows &	CMatrix_Base::SetNrows (void)
	Assign a value to Nrows data member. More...
bool	CMatrix_Base::IsSetRow_labels (void) const
	Check if a value has been assigned to Row_labels data member. More...
bool	CMatrix_Base::CanGetRow_labels (void) const
	Check if it is safe to call GetRow_labels method. More...
void	CMatrix_Base::ResetRow_labels (void)
	Reset Row_labels data member. More...
const TRow_labels &	CMatrix_Base::GetRow_labels (void) const
	Get the Row_labels member data. More...
TRow_labels &	CMatrix_Base::SetRow_labels (void)
	Assign a value to Row_labels data member. More...
bool	CMatrix_Base::IsSetScale_factor (void) const
	Check if a value has been assigned to Scale_factor data member. More...
bool	CMatrix_Base::CanGetScale_factor (void) const
	Check if it is safe to call GetScale_factor method. More...
void	CMatrix_Base::ResetScale_factor (void)
	Reset Scale_factor data member. More...
TScale_factor	CMatrix_Base::GetScale_factor (void) const
	Get the Scale_factor member data. More...
void	CMatrix_Base::SetScale_factor (TScale_factor value)
	Assign a value to Scale_factor data member. More...
TScale_factor &	CMatrix_Base::SetScale_factor (void)
	Assign a value to Scale_factor data member. More...
bool	CMatrix_Base::IsSetColumns (void) const
	Check if a value has been assigned to Columns data member. More...
bool	CMatrix_Base::CanGetColumns (void) const
	Check if it is safe to call GetColumns method. More...
void	CMatrix_Base::ResetColumns (void)
	Reset Columns data member. More...
const TColumns &	CMatrix_Base::GetColumns (void) const
	Get the Columns member data. More...
TColumns &	CMatrix_Base::SetColumns (void)
	Assign a value to Columns data member. More...
virtual void	CMatrix_Base::Reset (void)
	Reset the whole object. More...
	CMatrix_Base::CMatrix_Base (const CMatrix_Base &)
CMatrix_Base &	CMatrix_Base::operator= (const CMatrix_Base &)
	CNode_annotation::CNode_annotation (void)
	CNode_annotation::~CNode_annotation (void)
	CNode_annotation::CNode_annotation (const CNode_annotation &value)
CNode_annotation &	CNode_annotation::operator= (const CNode_annotation &value)
	CNode_annotation_Base::CNode_annotation_Base (void)
virtual	CNode_annotation_Base::~CNode_annotation_Base (void)
	CNode_annotation_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNode_annotation_Base::IsSetPresentInChildCD (void) const
	Check if a value has been assigned to PresentInChildCD data member. More...
bool	CNode_annotation_Base::CanGetPresentInChildCD (void) const
	Check if it is safe to call GetPresentInChildCD method. More...
void	CNode_annotation_Base::ResetPresentInChildCD (void)
	Reset PresentInChildCD data member. More...
const TPresentInChildCD &	CNode_annotation_Base::GetPresentInChildCD (void) const
	Get the PresentInChildCD member data. More...
void	CNode_annotation_Base::SetPresentInChildCD (const TPresentInChildCD &value)
	Assign a value to PresentInChildCD data member. More...
void	CNode_annotation_Base::SetPresentInChildCD (TPresentInChildCD &&value)
TPresentInChildCD &	CNode_annotation_Base::SetPresentInChildCD (void)
	Assign a value to PresentInChildCD data member. More...
bool	CNode_annotation_Base::IsSetNote (void) const
	Check if a value has been assigned to Note data member. More...
bool	CNode_annotation_Base::CanGetNote (void) const
	Check if it is safe to call GetNote method. More...
void	CNode_annotation_Base::ResetNote (void)
	Reset Note data member. More...
const TNote &	CNode_annotation_Base::GetNote (void) const
	Get the Note member data. More...
void	CNode_annotation_Base::SetNote (const TNote &value)
	Assign a value to Note data member. More...
void	CNode_annotation_Base::SetNote (TNote &&value)
TNote &	CNode_annotation_Base::SetNote (void)
	Assign a value to Note data member. More...
virtual void	CNode_annotation_Base::Reset (void)
	Reset the whole object. More...
	CNode_annotation_Base::CNode_annotation_Base (const CNode_annotation_Base &)
CNode_annotation_Base &	CNode_annotation_Base::operator= (const CNode_annotation_Base &)
	CReject_id::CReject_id (void)
	CReject_id::~CReject_id (void)
	CReject_id::CReject_id (const CReject_id &value)
CReject_id &	CReject_id::operator= (const CReject_id &value)
	CReject_id_Base::CReject_id_Base (void)
virtual	CReject_id_Base::~CReject_id_Base (void)
	CReject_id_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CReject_id_Base::IsSetDescription (void) const
	Check if a value has been assigned to Description data member. More...
bool	CReject_id_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CReject_id_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CReject_id_Base::GetDescription (void) const
	Get the Description member data. More...
TDescription &	CReject_id_Base::SetDescription (void)
	Assign a value to Description data member. More...
bool	CReject_id_Base::IsSetIds (void) const
	Check if a value has been assigned to Ids data member. More...
bool	CReject_id_Base::CanGetIds (void) const
	Check if it is safe to call GetIds method. More...
void	CReject_id_Base::ResetIds (void)
	Reset Ids data member. More...
const TIds &	CReject_id_Base::GetIds (void) const
	Get the Ids member data. More...
TIds &	CReject_id_Base::SetIds (void)
	Assign a value to Ids data member. More...
virtual void	CReject_id_Base::Reset (void)
	Reset the whole object. More...
	CReject_id_Base::CReject_id_Base (const CReject_id_Base &)
CReject_id_Base &	CReject_id_Base::operator= (const CReject_id_Base &)
	CSeqTree_node::CSeqTree_node (void)
	CSeqTree_node::~CSeqTree_node (void)
	CSeqTree_node::CSeqTree_node (const CSeqTree_node &value)
CSeqTree_node &	CSeqTree_node::operator= (const CSeqTree_node &value)
	CSeqTree_node_Base::CSeqTree_node_Base (void)
virtual	CSeqTree_node_Base::~CSeqTree_node_Base (void)
	CSeqTree_node_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CSeqTree_node_Base::C_Children::C_Children (void)
	CSeqTree_node_Base::C_Children::~C_Children (void)
	CSeqTree_node_Base::C_Children::DECLARE_INTERNAL_TYPE_INFO ()
	CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint (void)
	CSeqTree_node_Base::C_Children::C_Footprint::~C_Footprint (void)
	CSeqTree_node_Base::C_Children::C_Footprint::DECLARE_INTERNAL_TYPE_INFO ()
bool	CSeqTree_node_Base::C_Children::C_Footprint::IsSetSeqRange (void) const
	Check if a value has been assigned to SeqRange data member. More...
bool	CSeqTree_node_Base::C_Children::C_Footprint::CanGetSeqRange (void) const
	Check if it is safe to call GetSeqRange method. More...
void	CSeqTree_node_Base::C_Children::C_Footprint::ResetSeqRange (void)
	Reset SeqRange data member. More...
const TSeqRange &	CSeqTree_node_Base::C_Children::C_Footprint::GetSeqRange (void) const
	Get the SeqRange member data. More...
void	CSeqTree_node_Base::C_Children::C_Footprint::SetSeqRange (TSeqRange &value)
	Assign a value to SeqRange data member. More...
TSeqRange &	CSeqTree_node_Base::C_Children::C_Footprint::SetSeqRange (void)
	Assign a value to SeqRange data member. More...
bool	CSeqTree_node_Base::C_Children::C_Footprint::IsSetRowId (void) const
	Check if a value has been assigned to RowId data member. More...
bool	CSeqTree_node_Base::C_Children::C_Footprint::CanGetRowId (void) const
	Check if it is safe to call GetRowId method. More...
void	CSeqTree_node_Base::C_Children::C_Footprint::ResetRowId (void)
	Reset RowId data member. More...
TRowId	CSeqTree_node_Base::C_Children::C_Footprint::GetRowId (void) const
	Get the RowId member data. More...
void	CSeqTree_node_Base::C_Children::C_Footprint::SetRowId (TRowId value)
	Assign a value to RowId data member. More...
TRowId &	CSeqTree_node_Base::C_Children::C_Footprint::SetRowId (void)
	Assign a value to RowId data member. More...
void	CSeqTree_node_Base::C_Children::C_Footprint::Reset (void)
	Reset the whole object. More...
	CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint (const C_Footprint &)
C_Footprint &	CSeqTree_node_Base::C_Children::C_Footprint::operator= (const C_Footprint &)
void	CSeqTree_node_Base::C_Children::Reset (void)
	Reset the whole object. More...
void	CSeqTree_node_Base::C_Children::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CSeqTree_node_Base::C_Children::Which (void) const
	Which variant is currently selected. More...
void	CSeqTree_node_Base::C_Children::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CSeqTree_node_Base::C_Children::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CSeqTree_node_Base::C_Children::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CSeqTree_node_Base::C_Children::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CSeqTree_node_Base::C_Children::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CSeqTree_node_Base::C_Children::IsChildren (void) const
	Check if variant Children is selected. More...
const TChildren &	CSeqTree_node_Base::C_Children::GetChildren (void) const
	Get the variant data. More...
TChildren &	CSeqTree_node_Base::C_Children::SetChildren (void)
	Select the variant. More...
bool	CSeqTree_node_Base::C_Children::IsFootprint (void) const
	Check if variant Footprint is selected. More...
const TFootprint &	CSeqTree_node_Base::C_Children::GetFootprint (void) const
	Get the variant data. More...
TFootprint &	CSeqTree_node_Base::C_Children::SetFootprint (void)
	Select the variant. More...
void	CSeqTree_node_Base::C_Children::SetFootprint (TFootprint &value)
	Select the variant and set its data. More...
	CSeqTree_node_Base::C_Children::C_Children (const C_Children &)
C_Children &	CSeqTree_node_Base::C_Children::operator= (const C_Children &)
void	CSeqTree_node_Base::C_Children::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CSeqTree_node_Base::IsSetIsAnnotated (void) const
	Check if a value has been assigned to IsAnnotated data member. More...
bool	CSeqTree_node_Base::CanGetIsAnnotated (void) const
	Check if it is safe to call GetIsAnnotated method. More...
void	CSeqTree_node_Base::ResetIsAnnotated (void)
	Reset IsAnnotated data member. More...
void	CSeqTree_node_Base::SetDefaultIsAnnotated (void)
	Assign default value to IsAnnotated data member. More...
TIsAnnotated	CSeqTree_node_Base::GetIsAnnotated (void) const
	Get the IsAnnotated member data. More...
void	CSeqTree_node_Base::SetIsAnnotated (TIsAnnotated value)
	Assign a value to IsAnnotated data member. More...
TIsAnnotated &	CSeqTree_node_Base::SetIsAnnotated (void)
	Assign a value to IsAnnotated data member. More...
bool	CSeqTree_node_Base::IsSetName (void) const
	Check if a value has been assigned to Name data member. More...
bool	CSeqTree_node_Base::CanGetName (void) const
	Check if it is safe to call GetName method. More...
void	CSeqTree_node_Base::ResetName (void)
	Reset Name data member. More...
const TName &	CSeqTree_node_Base::GetName (void) const
	Get the Name member data. More...
void	CSeqTree_node_Base::SetName (const TName &value)
	Assign a value to Name data member. More...
void	CSeqTree_node_Base::SetName (TName &&value)
TName &	CSeqTree_node_Base::SetName (void)
	Assign a value to Name data member. More...
bool	CSeqTree_node_Base::IsSetDistance (void) const
	Check if a value has been assigned to Distance data member. More...
bool	CSeqTree_node_Base::CanGetDistance (void) const
	Check if it is safe to call GetDistance method. More...
void	CSeqTree_node_Base::ResetDistance (void)
	Reset Distance data member. More...
TDistance	CSeqTree_node_Base::GetDistance (void) const
	Get the Distance member data. More...
void	CSeqTree_node_Base::SetDistance (TDistance value)
	Assign a value to Distance data member. More...
TDistance &	CSeqTree_node_Base::SetDistance (void)
	Assign a value to Distance data member. More...
bool	CSeqTree_node_Base::IsSetChildren (void) const
	Check if a value has been assigned to Children data member. More...
bool	CSeqTree_node_Base::CanGetChildren (void) const
	Check if it is safe to call GetChildren method. More...
void	CSeqTree_node_Base::ResetChildren (void)
	Reset Children data member. More...
const TChildren &	CSeqTree_node_Base::GetChildren (void) const
	Get the Children member data. More...
void	CSeqTree_node_Base::SetChildren (TChildren &value)
	Assign a value to Children data member. More...
TChildren &	CSeqTree_node_Base::SetChildren (void)
	Assign a value to Children data member. More...
bool	CSeqTree_node_Base::IsSetAnnotation (void) const
	Check if a value has been assigned to Annotation data member. More...
bool	CSeqTree_node_Base::CanGetAnnotation (void) const
	Check if it is safe to call GetAnnotation method. More...
void	CSeqTree_node_Base::ResetAnnotation (void)
	Reset Annotation data member. More...
const TAnnotation &	CSeqTree_node_Base::GetAnnotation (void) const
	Get the Annotation member data. More...
void	CSeqTree_node_Base::SetAnnotation (TAnnotation &value)
	Assign a value to Annotation data member. More...
TAnnotation &	CSeqTree_node_Base::SetAnnotation (void)
	Assign a value to Annotation data member. More...
virtual void	CSeqTree_node_Base::Reset (void)
	Reset the whole object. More...
	CSeqTree_node_Base::CSeqTree_node_Base (const CSeqTree_node_Base &)
CSeqTree_node_Base &	CSeqTree_node_Base::operator= (const CSeqTree_node_Base &)
	CSequence_tree::CSequence_tree (void)
	CSequence_tree::~CSequence_tree (void)
	CSequence_tree::CSequence_tree (const CSequence_tree &value)
CSequence_tree &	CSequence_tree::operator= (const CSequence_tree &value)
	CSequence_tree_Base::CSequence_tree_Base (void)
virtual	CSequence_tree_Base::~CSequence_tree_Base (void)
	CSequence_tree_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CSequence_tree_Base::IsSetCdAccession (void) const
	Check if a value has been assigned to CdAccession data member. More...
bool	CSequence_tree_Base::CanGetCdAccession (void) const
	Check if it is safe to call GetCdAccession method. More...
void	CSequence_tree_Base::ResetCdAccession (void)
	Reset CdAccession data member. More...
const TCdAccession &	CSequence_tree_Base::GetCdAccession (void) const
	Get the CdAccession member data. More...
void	CSequence_tree_Base::SetCdAccession (const TCdAccession &value)
	Assign a value to CdAccession data member. More...
void	CSequence_tree_Base::SetCdAccession (TCdAccession &&value)
TCdAccession &	CSequence_tree_Base::SetCdAccession (void)
	Assign a value to CdAccession data member. More...
bool	CSequence_tree_Base::IsSetAlgorithm (void) const
	Check if a value has been assigned to Algorithm data member. More...
bool	CSequence_tree_Base::CanGetAlgorithm (void) const
	Check if it is safe to call GetAlgorithm method. More...
void	CSequence_tree_Base::ResetAlgorithm (void)
	Reset Algorithm data member. More...
const TAlgorithm &	CSequence_tree_Base::GetAlgorithm (void) const
	Get the Algorithm member data. More...
void	CSequence_tree_Base::SetAlgorithm (TAlgorithm &value)
	Assign a value to Algorithm data member. More...
TAlgorithm &	CSequence_tree_Base::SetAlgorithm (void)
	Assign a value to Algorithm data member. More...
bool	CSequence_tree_Base::IsSetIsAnnotated (void) const
	Check if a value has been assigned to IsAnnotated data member. More...
bool	CSequence_tree_Base::CanGetIsAnnotated (void) const
	Check if it is safe to call GetIsAnnotated method. More...
void	CSequence_tree_Base::ResetIsAnnotated (void)
	Reset IsAnnotated data member. More...
void	CSequence_tree_Base::SetDefaultIsAnnotated (void)
	Assign default value to IsAnnotated data member. More...
TIsAnnotated	CSequence_tree_Base::GetIsAnnotated (void) const
	Get the IsAnnotated member data. More...
void	CSequence_tree_Base::SetIsAnnotated (TIsAnnotated value)
	Assign a value to IsAnnotated data member. More...
TIsAnnotated &	CSequence_tree_Base::SetIsAnnotated (void)
	Assign a value to IsAnnotated data member. More...
bool	CSequence_tree_Base::IsSetRoot (void) const
	Check if a value has been assigned to Root data member. More...
bool	CSequence_tree_Base::CanGetRoot (void) const
	Check if it is safe to call GetRoot method. More...
void	CSequence_tree_Base::ResetRoot (void)
	Reset Root data member. More...
const TRoot &	CSequence_tree_Base::GetRoot (void) const
	Get the Root member data. More...
void	CSequence_tree_Base::SetRoot (TRoot &value)
	Assign a value to Root data member. More...
TRoot &	CSequence_tree_Base::SetRoot (void)
	Assign a value to Root data member. More...
virtual void	CSequence_tree_Base::Reset (void)
	Reset the whole object. More...
	CSequence_tree_Base::CSequence_tree_Base (const CSequence_tree_Base &)
CSequence_tree_Base &	CSequence_tree_Base::operator= (const CSequence_tree_Base &)
	CTriangle::CTriangle (void)
	CTriangle::~CTriangle (void)
	CTriangle::CTriangle (const CTriangle &value)
CTriangle &	CTriangle::operator= (const CTriangle &value)
	CTriangle_Base::CTriangle_Base (void)
virtual	CTriangle_Base::~CTriangle_Base (void)
	CTriangle_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CTriangle_Base::IsSetNelements (void) const
	Check if a value has been assigned to Nelements data member. More...
bool	CTriangle_Base::CanGetNelements (void) const
	Check if it is safe to call GetNelements method. More...
void	CTriangle_Base::ResetNelements (void)
	Reset Nelements data member. More...
TNelements	CTriangle_Base::GetNelements (void) const
	Get the Nelements member data. More...
void	CTriangle_Base::SetNelements (TNelements value)
	Assign a value to Nelements data member. More...
TNelements &	CTriangle_Base::SetNelements (void)
	Assign a value to Nelements data member. More...
bool	CTriangle_Base::IsSetScores (void) const
	Check if a value has been assigned to Scores data member. More...
bool	CTriangle_Base::CanGetScores (void) const
	Check if it is safe to call GetScores method. More...
void	CTriangle_Base::ResetScores (void)
	Reset Scores data member. More...
const TScores &	CTriangle_Base::GetScores (void) const
	Get the Scores member data. More...
void	CTriangle_Base::SetScores (TScores &value)
	Assign a value to Scores data member. More...
TScores &	CTriangle_Base::SetScores (void)
	Assign a value to Scores data member. More...
bool	CTriangle_Base::IsSetDiv_ranks (void) const
	Check if a value has been assigned to Div_ranks data member. More...
bool	CTriangle_Base::CanGetDiv_ranks (void) const
	Check if it is safe to call GetDiv_ranks method. More...
void	CTriangle_Base::ResetDiv_ranks (void)
	Reset Div_ranks data member. More...
const TDiv_ranks &	CTriangle_Base::GetDiv_ranks (void) const
	Get the Div_ranks member data. More...
TDiv_ranks &	CTriangle_Base::SetDiv_ranks (void)
	Assign a value to Div_ranks data member. More...
virtual void	CTriangle_Base::Reset (void)
	Reset the whole object. More...
	CTriangle_Base::CTriangle_Base (const CTriangle_Base &)
CTriangle_Base &	CTriangle_Base::operator= (const CTriangle_Base &)
	CUpdate_align::CUpdate_align (void)
	CUpdate_align::~CUpdate_align (void)
	CUpdate_align::CUpdate_align (const CUpdate_align &value)
CUpdate_align &	CUpdate_align::operator= (const CUpdate_align &value)
	CUpdate_align_Base::CUpdate_align_Base (void)
virtual	CUpdate_align_Base::~CUpdate_align_Base (void)
	CUpdate_align_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CUpdate_align_Base::EType (void)
	Access to EType's attributes (values, names) as defined in spec. More...
bool	CUpdate_align_Base::IsSetDescription (void) const
	Check if a value has been assigned to Description data member. More...
bool	CUpdate_align_Base::CanGetDescription (void) const
	Check if it is safe to call GetDescription method. More...
void	CUpdate_align_Base::ResetDescription (void)
	Reset Description data member. More...
const TDescription &	CUpdate_align_Base::GetDescription (void) const
	Get the Description member data. More...
TDescription &	CUpdate_align_Base::SetDescription (void)
	Assign a value to Description data member. More...
bool	CUpdate_align_Base::IsSetSeqannot (void) const
	contains the SeqAlign Check if a value has been assigned to Seqannot data member. More...
bool	CUpdate_align_Base::CanGetSeqannot (void) const
	Check if it is safe to call GetSeqannot method. More...
void	CUpdate_align_Base::ResetSeqannot (void)
	Reset Seqannot data member. More...
const TSeqannot &	CUpdate_align_Base::GetSeqannot (void) const
	Get the Seqannot member data. More...
void	CUpdate_align_Base::SetSeqannot (TSeqannot &value)
	Assign a value to Seqannot data member. More...
TSeqannot &	CUpdate_align_Base::SetSeqannot (void)
	Assign a value to Seqannot data member. More...
bool	CUpdate_align_Base::IsSetType (void) const
	Check if a value has been assigned to Type data member. More...
bool	CUpdate_align_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CUpdate_align_Base::ResetType (void)
	Reset Type data member. More...
TType	CUpdate_align_Base::GetType (void) const
	Get the Type member data. More...
void	CUpdate_align_Base::SetType (TType value)
	Assign a value to Type data member. More...
TType &	CUpdate_align_Base::SetType (void)
	Assign a value to Type data member. More...
virtual void	CUpdate_align_Base::Reset (void)
	Reset the whole object. More...
	CUpdate_align_Base::CUpdate_align_Base (const CUpdate_align_Base &)
CUpdate_align_Base &	CUpdate_align_Base::operator= (const CUpdate_align_Base &)
	CUpdate_comment::CUpdate_comment (void)
	CUpdate_comment::~CUpdate_comment (void)
	CUpdate_comment::CUpdate_comment (const CUpdate_comment &value)
CUpdate_comment &	CUpdate_comment::operator= (const CUpdate_comment &value)
	CUpdate_comment_Base::CUpdate_comment_Base (void)
virtual	CUpdate_comment_Base::~CUpdate_comment_Base (void)
	CUpdate_comment_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CUpdate_comment_Base::Reset (void)
	Reset the whole object. More...
virtual void	CUpdate_comment_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CUpdate_comment_Base::Which (void) const
	Which variant is currently selected. More...
void	CUpdate_comment_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CUpdate_comment_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CUpdate_comment_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CUpdate_comment_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CUpdate_comment_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CUpdate_comment_Base::IsComment (void) const
	Check if variant Comment is selected. More...
const TComment &	CUpdate_comment_Base::GetComment (void) const
	Get the variant data. More...
TComment &	CUpdate_comment_Base::SetComment (void)
	Select the variant. More...
void	CUpdate_comment_Base::SetComment (const TComment &value)
	Select the variant and set its data. More...
bool	CUpdate_comment_Base::IsAddthis (void) const
	Check if variant Addthis is selected. More...
const TAddthis &	CUpdate_comment_Base::GetAddthis (void) const
	Get the variant data. More...
TAddthis &	CUpdate_comment_Base::SetAddthis (void)
	Select the variant. More...
void	CUpdate_comment_Base::SetAddthis (TAddthis &value)
	Select the variant and set its data. More...
bool	CUpdate_comment_Base::IsReplaces (void) const
	Check if variant Replaces is selected. More...
const TReplaces &	CUpdate_comment_Base::GetReplaces (void) const
	Get the variant data. More...
TReplaces &	CUpdate_comment_Base::SetReplaces (void)
	Select the variant. More...
void	CUpdate_comment_Base::SetReplaces (TReplaces &value)
	Select the variant and set its data. More...
bool	CUpdate_comment_Base::IsReject_loc (void) const
	Check if variant Reject_loc is selected. More...
const TReject_loc &	CUpdate_comment_Base::GetReject_loc (void) const
	Get the variant data. More...
TReject_loc &	CUpdate_comment_Base::SetReject_loc (void)
	Select the variant. More...
void	CUpdate_comment_Base::SetReject_loc (TReject_loc &value)
	Select the variant and set its data. More...
bool	CUpdate_comment_Base::IsReference (void) const
	Check if variant Reference is selected. More...
const TReference &	CUpdate_comment_Base::GetReference (void) const
	Get the variant data. More...
TReference &	CUpdate_comment_Base::SetReference (void)
	Select the variant. More...
void	CUpdate_comment_Base::SetReference (TReference &value)
	Select the variant and set its data. More...
	CUpdate_comment_Base::CUpdate_comment_Base (const CUpdate_comment_Base &)
CUpdate_comment_Base &	CUpdate_comment_Base::operator= (const CUpdate_comment_Base &)
void	CUpdate_comment_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)

Variables
Uint4	CAlgorithm_type_Base::m_set_State [1]
int	CAlgorithm_type_Base::m_Scoring_Scheme
int	CAlgorithm_type_Base::m_Clustering_Method
int	CAlgorithm_type_Base::m_Score_Matrix
int	CAlgorithm_type_Base::m_GapOpen
int	CAlgorithm_type_Base::m_GapExtend
int	CAlgorithm_type_Base::m_GapScaleFactor
int	CAlgorithm_type_Base::m_NTerminalExt
int	CAlgorithm_type_Base::m_CTerminalExt
int	CAlgorithm_type_Base::m_Tree_scope
int	CAlgorithm_type_Base::m_Coloring_scope
Uint4	CAlign_annot_Base::m_set_State [1]
CRef< TLocation >	CAlign_annot_Base::m_Location
string	CAlign_annot_Base::m_Description
list< CRef< CFeature_evidence > >	CAlign_annot_Base::m_Evidence
int	CAlign_annot_Base::m_Type
list< string >	CAlign_annot_Base::m_Aliases
string	CAlign_annot_Base::m_Motif
int	CAlign_annot_Base::m_Motifuse
Uint4	CAlign_annot_set_Base::m_set_State [1]
list< CRef< CAlign_annot > >	CAlign_annot_set_Base::m_data
Uint4	CCdd_Base::m_set_State [2]
string	CCdd_Base::m_Name
CRef< TId >	CCdd_Base::m_Id
CRef< TDescription >	CCdd_Base::m_Description
list< CRef< CSeq_annot > >	CCdd_Base::m_Seqannot
CRef< TFeatures >	CCdd_Base::m_Features
CRef< TSequences >	CCdd_Base::m_Sequences
CRef< TProfile_range >	CCdd_Base::m_Profile_range
CRef< TTrunc_master >	CCdd_Base::m_Trunc_master
CRef< TPosfreq >	CCdd_Base::m_Posfreq
CRef< TScoremat >	CCdd_Base::m_Scoremat
CRef< TDistance >	CCdd_Base::m_Distance
CRef< TParent >	CCdd_Base::m_Parent
CRef< TChildren >	CCdd_Base::m_Children
CRef< TSiblings >	CCdd_Base::m_Siblings
CRef< TNeighbors >	CCdd_Base::m_Neighbors
list< CRef< CUpdate_align > >	CCdd_Base::m_Pending
list< CRef< CReject_id > >	CCdd_Base::m_Rejects
list< CRef< CSeq_id > >	CCdd_Base::m_Master3d
CRef< TAlignannot >	CCdd_Base::m_Alignannot
CRef< TStyle_dictionary >	CCdd_Base::m_Style_dictionary
CRef< TUser_annotations >	CCdd_Base::m_User_annotations
list< CRef< CDomain_parent > >	CCdd_Base::m_Ancestors
CRef< TScoreparams >	CCdd_Base::m_Scoreparams
CRef< TSeqtree >	CCdd_Base::m_Seqtree
Uint4	CCdd_book_ref_Base::m_set_State [1]
string	CCdd_book_ref_Base::m_Bookname
ETextelement	CCdd_book_ref_Base::m_Textelement
int	CCdd_book_ref_Base::m_Elementid
int	CCdd_book_ref_Base::m_Subelementid
string	CCdd_book_ref_Base::m_Celementid
string	CCdd_book_ref_Base::m_Csubelementid
E_Choice	CCdd_descr_Base::m_choice
static const char *const	CCdd_descr_Base::sm_SelectionNames []
TStatus   CCdd_descr_Base::m_Status
NCBI_NS_NCBI::CUnionBuffer< TScrapbook >   CCdd_descr_Base::m_Scrapbook
TCuration_status   CCdd_descr_Base::m_Curation_status
TReadonly_status   CCdd_descr_Base::m_Readonly_status
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CCdd_descr_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CCdd_descr_Base::m_object
union {
TStatus   CCdd_descr_Base::m_Status
NCBI_NS_NCBI::CUnionBuffer< TScrapbook >   CCdd_descr_Base::m_Scrapbook
TCuration_status   CCdd_descr_Base::m_Curation_status
TReadonly_status   CCdd_descr_Base::m_Readonly_status
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CCdd_descr_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CCdd_descr_Base::m_object
};
Uint4	CCdd_descr_set_Base::m_set_State [1]
list< CRef< CCdd_descr > >	CCdd_descr_set_Base::m_data
E_Choice	CCdd_id_Base::m_choice
static const char *const	CCdd_id_Base::sm_SelectionNames []
TUid   CCdd_id_Base::m_Uid
NCBI_NS_NCBI::CSerialObject *   CCdd_id_Base::m_object
union {
TUid   CCdd_id_Base::m_Uid
NCBI_NS_NCBI::CSerialObject *   CCdd_id_Base::m_object
};
Uint4	CCdd_id_set_Base::m_set_State [1]
list< CRef< CCdd_id > >	CCdd_id_set_Base::m_data
Uint4	CCdd_org_ref_Base::m_set_State [1]
CRef< TReference >	CCdd_org_ref_Base::m_Reference
bool	CCdd_org_ref_Base::m_Active
int	CCdd_org_ref_Base::m_Parent_tax_id
string	CCdd_org_ref_Base::m_Rank
Uint4	CCdd_org_ref_set_Base::m_set_State [1]
list< CRef< CCdd_org_ref > >	CCdd_org_ref_set_Base::m_data
E_Choice	CCdd_pref_node_descr_Base::m_choice
static const char *const	CCdd_pref_node_descr_Base::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CCdd_pref_node_descr_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CCdd_pref_node_descr_Base::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CCdd_pref_node_descr_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CCdd_pref_node_descr_Base::m_object
};
Uint4	CCdd_pref_node_descr_set_Base::m_set_State [1]
list< CRef< CCdd_pref_node_descr > >	CCdd_pref_node_descr_set_Base::m_data
Uint4	CCdd_pref_nodes_Base::m_set_State [1]
CRef< TPreferred_nodes >	CCdd_pref_nodes_Base::m_Preferred_nodes
CRef< TModel_organisms >	CCdd_pref_nodes_Base::m_Model_organisms
CRef< TOptional_nodes >	CCdd_pref_nodes_Base::m_Optional_nodes
CRef< TDescription >	CCdd_pref_nodes_Base::m_Description
Uint4	CCdd_Project_Base::m_set_State [1]
list< CRef< CCdd > >	CCdd_Project_Base::m_Cds
list< int >	CCdd_Project_Base::m_Cdcolor
list< CRef< CCdd_Viewer > >	CCdd_Project_Base::m_Viewers
string	CCdd_Project_Base::m_Log
list< CRef< CCdd_Script > >	CCdd_Project_Base::m_Scripts
CRef< TId >	CCdd_Project_Base::m_Id
list< string >	CCdd_Project_Base::m_Rids
CRef< TCreate_date >	CCdd_Project_Base::m_Create_date
CRef< TUpdate_date >	CCdd_Project_Base::m_Update_date
int	CCdd_Project_Base::m_Project_id
Uint4	CCdd_repeat_Base::m_set_State [1]
int	CCdd_repeat_Base::m_Count
CRef< TLocation >	CCdd_repeat_Base::m_Location
int	CCdd_repeat_Base::m_Avglen
Uint4	CCdd_Script_Base::m_set_State [1]
int	CCdd_Script_Base::m_Type
string	CCdd_Script_Base::m_Name
string	CCdd_Script_Base::m_Commands
Uint4	CCdd_set_Base::m_set_State [1]
list< CRef< CCdd > >	CCdd_set_Base::m_data
Uint4	CCdd_tree_Base::m_set_State [1]
string	CCdd_tree_Base::m_Name
CRef< TId >	CCdd_tree_Base::m_Id
CRef< TDescription >	CCdd_tree_Base::m_Description
CRef< TParent >	CCdd_tree_Base::m_Parent
CRef< TChildren >	CCdd_tree_Base::m_Children
CRef< TSiblings >	CCdd_tree_Base::m_Siblings
CRef< TNeighbors >	CCdd_tree_Base::m_Neighbors
Uint4	CCdd_tree_set_Base::m_set_State [1]
list< CRef< CCdd_tree > >	CCdd_tree_set_Base::m_data
Uint4	CCdd_Viewer_Base::m_set_State [1]
int	CCdd_Viewer_Base::m_Ctrl
CRef< TRect >	CCdd_Viewer_Base::m_Rect
list< string >	CCdd_Viewer_Base::m_Accessions
Uint4	CCdd_Viewer_Rect_Base::m_set_State [1]
int	CCdd_Viewer_Rect_Base::m_Top
int	CCdd_Viewer_Rect_Base::m_Left
int	CCdd_Viewer_Rect_Base::m_Width
int	CCdd_Viewer_Rect_Base::m_Height
Uint4	CDomain_parent_Base::m_set_State [1]
int	CDomain_parent_Base::m_Parent_type
CRef< TParentid >	CDomain_parent_Base::m_Parentid
CRef< TSeqannot >	CDomain_parent_Base::m_Seqannot
E_Choice	CFeature_evidence_Base::m_choice
static const char *const	CFeature_evidence_Base::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CFeature_evidence_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CFeature_evidence_Base::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CFeature_evidence_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CFeature_evidence_Base::m_object
};
Uint4	CGlobal_id_Base::m_set_State [1]
string	CGlobal_id_Base::m_Accession
string	CGlobal_id_Base::m_Release
int	CGlobal_id_Base::m_Version
string	CGlobal_id_Base::m_Database
Uint4	CMatrix_Base::m_set_State [1]
int	CMatrix_Base::m_Ncolumns
int	CMatrix_Base::m_Nrows
list< string >	CMatrix_Base::m_Row_labels
int	CMatrix_Base::m_Scale_factor
list< int >	CMatrix_Base::m_Columns
Uint4	CNode_annotation_Base::m_set_State [1]
string	CNode_annotation_Base::m_PresentInChildCD
string	CNode_annotation_Base::m_Note
Uint4	CReject_id_Base::m_set_State [1]
list< CRef< CUpdate_comment > >	CReject_id_Base::m_Description
list< CRef< CSeq_id > >	CReject_id_Base::m_Ids
Uint4	CSeqTree_node_Base::C_Children::C_Footprint::m_set_State [1]
CRef< TSeqRange >	CSeqTree_node_Base::C_Children::C_Footprint::m_SeqRange
int	CSeqTree_node_Base::C_Children::C_Footprint::m_RowId
E_Choice	CSeqTree_node_Base::C_Children::m_choice
static const char *const	CSeqTree_node_Base::C_Children::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< TChildren >   CSeqTree_node_Base::C_Children::m_Children
NCBI_NS_NCBI::CSerialObject *   CSeqTree_node_Base::C_Children::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< TChildren >   CSeqTree_node_Base::C_Children::m_Children
NCBI_NS_NCBI::CSerialObject *   CSeqTree_node_Base::C_Children::m_object
};
Uint4	CSeqTree_node_Base::m_set_State [1]
bool	CSeqTree_node_Base::m_IsAnnotated
string	CSeqTree_node_Base::m_Name
double	CSeqTree_node_Base::m_Distance
CRef< TChildren >	CSeqTree_node_Base::m_Children
CRef< TAnnotation >	CSeqTree_node_Base::m_Annotation
Uint4	CSequence_tree_Base::m_set_State [1]
string	CSequence_tree_Base::m_CdAccession
CRef< TAlgorithm >	CSequence_tree_Base::m_Algorithm
bool	CSequence_tree_Base::m_IsAnnotated
CRef< TRoot >	CSequence_tree_Base::m_Root
Uint4	CTriangle_Base::m_set_State [1]
int	CTriangle_Base::m_Nelements
CRef< TScores >	CTriangle_Base::m_Scores
list< int >	CTriangle_Base::m_Div_ranks
Uint4	CUpdate_align_Base::m_set_State [1]
list< CRef< CUpdate_comment > >	CUpdate_align_Base::m_Description
CRef< TSeqannot >	CUpdate_align_Base::m_Seqannot
int	CUpdate_align_Base::m_Type
E_Choice	CUpdate_comment_Base::m_choice
static const char *const	CUpdate_comment_Base::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CUpdate_comment_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CUpdate_comment_Base::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CUpdate_comment_Base::m_string
NCBI_NS_NCBI::CSerialObject *   CUpdate_comment_Base::m_object
};

Detailed Description

Typedef Documentation

TAccession

typedef string CGlobal_id_Base::TAccession

Definition at line 91 of file Global_id_.hpp.

TAccessions

typedef list< string > CCdd_Viewer_Base::TAccessions

Definition at line 111 of file Cdd_Viewer_.hpp.

TActive

typedef bool CCdd_org_ref_Base::TActive

Definition at line 91 of file Cdd_org_ref_.hpp.

TAddthis

typedef CSeq_loc CUpdate_comment_Base::TAddthis

Definition at line 157 of file Update_comment_.hpp.

TAlgorithm

typedef CAlgorithm_type CSequence_tree_Base::TAlgorithm

Definition at line 92 of file Sequence_tree_.hpp.

TAliases

typedef list< string > CAlign_annot_Base::TAliases

Definition at line 95 of file Align_annot_.hpp.

TAlignannot

typedef CAlign_annot_set CCdd_Base::TAlignannot

Definition at line 136 of file Cdd_.hpp.

TAncestors

typedef list< CRef< CDomain_parent > > CCdd_Base::TAncestors

Definition at line 139 of file Cdd_.hpp.

TAnnotation

typedef CNode_annotation CSeqTree_node_Base::TAnnotation

Definition at line 363 of file SeqTree_node_.hpp.

TAttribution

typedef CPub CCdd_descr_Base::TAttribution

Definition at line 235 of file Cdd_descr_.hpp.

TAvglen

typedef int CCdd_repeat_Base::TAvglen

Definition at line 89 of file Cdd_repeat_.hpp.

TBook_ref [1/2]

typedef CCdd_book_ref CCdd_descr_Base::TBook_ref

Definition at line 234 of file Cdd_descr_.hpp.

TBook_ref [2/2]

typedef CCdd_book_ref CFeature_evidence_Base::TBook_ref

Definition at line 158 of file Feature_evidence_.hpp.

TBookname

typedef string CCdd_book_ref_Base::TBookname

Definition at line 102 of file Cdd_book_ref_.hpp.

TBsannot

typedef CBiostruc_annot_set CFeature_evidence_Base::TBsannot

Definition at line 156 of file Feature_evidence_.hpp.

TCategory

typedef string CCdd_descr_Base::TCategory

Definition at line 220 of file Cdd_descr_.hpp.

TCdAccession

typedef string CSequence_tree_Base::TCdAccession

Definition at line 91 of file Sequence_tree_.hpp.

TCdcolor

typedef list< int > CCdd_Project_Base::TCdcolor

Definition at line 96 of file Cdd_Project_.hpp.

TCds

typedef list< CRef< CCdd > > CCdd_Project_Base::TCds

Definition at line 95 of file Cdd_Project_.hpp.

TCelementid

typedef string CCdd_book_ref_Base::TCelementid

Definition at line 106 of file Cdd_book_ref_.hpp.

TChildren [1/4]

typedef CCdd_id_set CCdd_Base::TChildren

Definition at line 130 of file Cdd_.hpp.

TChildren [2/4]

typedef CCdd_id_set CCdd_tree_Base::TChildren

Definition at line 99 of file Cdd_tree_.hpp.

TChildren [3/4]

typedef list< CRef< CSeqTree_node > > CSeqTree_node_Base::C_Children::TChildren

Definition at line 288 of file SeqTree_node_.hpp.

TChildren [4/4]

typedef C_Children CSeqTree_node_Base::TChildren

Definition at line 362 of file SeqTree_node_.hpp.

TClustering_Method

typedef int CAlgorithm_type_Base::TClustering_Method

Definition at line 142 of file Algorithm_type_.hpp.

TColoring_scope

typedef int CAlgorithm_type_Base::TColoring_scope

Definition at line 150 of file Algorithm_type_.hpp.

TColumns

typedef list< int > CMatrix_Base::TColumns

Definition at line 94 of file Matrix_.hpp.

TCommands

typedef string CCdd_Script_Base::TCommands

Definition at line 97 of file Cdd_Script_.hpp.

TComment [1/3]

typedef string CCdd_descr_Base::TComment

Definition at line 221 of file Cdd_descr_.hpp.

TComment [2/3]

typedef string CFeature_evidence_Base::TComment

Definition at line 154 of file Feature_evidence_.hpp.

TComment [3/3]

typedef string CUpdate_comment_Base::TComment

Definition at line 156 of file Update_comment_.hpp.

TCount

typedef int CCdd_repeat_Base::TCount

Definition at line 87 of file Cdd_repeat_.hpp.

TCreate_date [1/3]

typedef CDate CCdd_descr_Base::TCreate_date

Definition at line 223 of file Cdd_descr_.hpp.

TCreate_date [2/3]

typedef CDate CCdd_pref_node_descr_Base::TCreate_date

Definition at line 148 of file Cdd_pref_node_descr_.hpp.

TCreate_date [3/3]

typedef CDate CCdd_Project_Base::TCreate_date

Definition at line 102 of file Cdd_Project_.hpp.

TCsubelementid

typedef string CCdd_book_ref_Base::TCsubelementid

Definition at line 107 of file Cdd_book_ref_.hpp.

TCTerminalExt

typedef int CAlgorithm_type_Base::TCTerminalExt

Definition at line 148 of file Algorithm_type_.hpp.

TCtrl

typedef int CCdd_Viewer_Base::TCtrl

Definition at line 109 of file Cdd_Viewer_.hpp.

TCuration_status

typedef int CCdd_descr_Base::TCuration_status

Definition at line 232 of file Cdd_descr_.hpp.

Tdata [1/7]

typedef list< CRef< CAlign_annot > > CAlign_annot_set_Base::Tdata

Definition at line 89 of file Align_annot_set_.hpp.

Tdata [2/7]

typedef list< CRef< CCdd_descr > > CCdd_descr_set_Base::Tdata

Definition at line 89 of file Cdd_descr_set_.hpp.

Tdata [3/7]

typedef list< CRef< CCdd_id > > CCdd_id_set_Base::Tdata

Definition at line 89 of file Cdd_id_set_.hpp.

Tdata [4/7]

typedef list< CRef< CCdd_org_ref > > CCdd_org_ref_set_Base::Tdata

Definition at line 89 of file Cdd_org_ref_set_.hpp.

Tdata [5/7]

typedef list< CRef< CCdd_pref_node_descr > > CCdd_pref_node_descr_set_Base::Tdata

Definition at line 89 of file Cdd_pref_node_descr_set_.hpp.

Tdata [6/7]

typedef list< CRef< CCdd > > CCdd_set_Base::Tdata

Definition at line 89 of file Cdd_set_.hpp.

Tdata [7/7]

typedef list< CRef< CCdd_tree > > CCdd_tree_set_Base::Tdata

Definition at line 89 of file Cdd_tree_set_.hpp.

TDatabase

typedef string CGlobal_id_Base::TDatabase

Definition at line 94 of file Global_id_.hpp.

TDescription [1/7]

typedef string CAlign_annot_Base::TDescription

Definition at line 92 of file Align_annot_.hpp.

TDescription [2/7]

typedef CCdd_descr_set CCdd_Base::TDescription

Definition at line 120 of file Cdd_.hpp.

TDescription [3/7]

typedef string CCdd_pref_node_descr_Base::TDescription

Definition at line 149 of file Cdd_pref_node_descr_.hpp.

TDescription [4/7]

typedef CCdd_pref_node_descr_set CCdd_pref_nodes_Base::TDescription

Definition at line 89 of file Cdd_pref_nodes_.hpp.

TDescription [5/7]

typedef CCdd_descr_set CCdd_tree_Base::TDescription

Definition at line 97 of file Cdd_tree_.hpp.

TDescription [6/7]

typedef list< CRef< CUpdate_comment > > CReject_id_Base::TDescription

Definition at line 90 of file Reject_id_.hpp.

TDescription [7/7]

typedef list< CRef< CUpdate_comment > > CUpdate_align_Base::TDescription

Definition at line 105 of file Update_align_.hpp.

TDistance [1/2]

typedef CTriangle CCdd_Base::TDistance

Definition at line 128 of file Cdd_.hpp.

TDistance [2/2]

typedef double CSeqTree_node_Base::TDistance

Definition at line 361 of file SeqTree_node_.hpp.

TDiv_ranks

typedef list< int > CTriangle_Base::TDiv_ranks

Definition at line 95 of file Triangle_.hpp.

TElementid

typedef int CCdd_book_ref_Base::TElementid

Definition at line 104 of file Cdd_book_ref_.hpp.

TEvidence

typedef list< CRef< CFeature_evidence > > CAlign_annot_Base::TEvidence

Definition at line 93 of file Align_annot_.hpp.

TFeatures

typedef CBiostruc_annot_set CCdd_Base::TFeatures

Definition at line 122 of file Cdd_.hpp.

TFootprint

typedef C_Footprint CSeqTree_node_Base::C_Children::TFootprint

Definition at line 289 of file SeqTree_node_.hpp.

TGapExtend

typedef int CAlgorithm_type_Base::TGapExtend

Definition at line 145 of file Algorithm_type_.hpp.

TGapOpen

typedef int CAlgorithm_type_Base::TGapOpen

Definition at line 144 of file Algorithm_type_.hpp.

TGapScaleFactor

typedef int CAlgorithm_type_Base::TGapScaleFactor

Definition at line 146 of file Algorithm_type_.hpp.

TGid

typedef CGlobal_id CCdd_id_Base::TGid

Definition at line 145 of file Cdd_id_.hpp.

THeight

typedef int CCdd_Viewer_Rect_Base::THeight

Definition at line 88 of file Cdd_Viewer_Rect_.hpp.

TId [1/3]

typedef CCdd_id_set CCdd_Base::TId

Definition at line 119 of file Cdd_.hpp.

TId [2/3]

typedef CCdd_id_set CCdd_Project_Base::TId

Definition at line 100 of file Cdd_Project_.hpp.

TId [3/3]

typedef CCdd_id_set CCdd_tree_Base::TId

Definition at line 96 of file Cdd_tree_.hpp.

TIds

typedef list< CRef< CSeq_id > > CReject_id_Base::TIds

Definition at line 91 of file Reject_id_.hpp.

TIsAnnotated [1/2]

typedef bool CSeqTree_node_Base::TIsAnnotated

Definition at line 359 of file SeqTree_node_.hpp.

TIsAnnotated [2/2]

typedef bool CSequence_tree_Base::TIsAnnotated

Definition at line 93 of file Sequence_tree_.hpp.

TLeft

typedef int CCdd_Viewer_Rect_Base::TLeft

Definition at line 86 of file Cdd_Viewer_Rect_.hpp.

TLocation [1/2]

typedef CSeq_loc CAlign_annot_Base::TLocation

Definition at line 91 of file Align_annot_.hpp.

TLocation [2/2]

typedef CSeq_loc CCdd_repeat_Base::TLocation

Definition at line 88 of file Cdd_repeat_.hpp.

TLog

typedef string CCdd_Project_Base::TLog

Definition at line 98 of file Cdd_Project_.hpp.

TMaster3d

typedef list< CRef< CSeq_id > > CCdd_Base::TMaster3d

Definition at line 135 of file Cdd_.hpp.

TmemberIndex [1/22]

typedef Tparent::CMemberIndex<E_memberIndex, 11> CAlgorithm_type_Base::TmemberIndex

Definition at line 166 of file Algorithm_type_.hpp.

TmemberIndex [2/22]

typedef Tparent::CMemberIndex<E_memberIndex, 8> CAlign_annot_Base::TmemberIndex

Definition at line 110 of file Align_annot_.hpp.

TmemberIndex [3/22]

typedef Tparent::CMemberIndex<E_memberIndex, 25> CCdd_Base::TmemberIndex

Definition at line 171 of file Cdd_.hpp.

TmemberIndex [4/22]

typedef Tparent::CMemberIndex<E_memberIndex, 7> CCdd_book_ref_Base::TmemberIndex

Definition at line 119 of file Cdd_book_ref_.hpp.

TmemberIndex [5/22]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CCdd_org_ref_Base::TmemberIndex

Definition at line 103 of file Cdd_org_ref_.hpp.

TmemberIndex [6/22]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CCdd_pref_nodes_Base::TmemberIndex

Definition at line 99 of file Cdd_pref_nodes_.hpp.

TmemberIndex [7/22]

typedef Tparent::CMemberIndex<E_memberIndex, 11> CCdd_Project_Base::TmemberIndex

Definition at line 120 of file Cdd_Project_.hpp.

TmemberIndex [8/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CCdd_repeat_Base::TmemberIndex

Definition at line 98 of file Cdd_repeat_.hpp.

TmemberIndex [9/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CCdd_Script_Base::TmemberIndex

Definition at line 106 of file Cdd_Script_.hpp.

TmemberIndex [10/22]

typedef Tparent::CMemberIndex<E_memberIndex, 8> CCdd_tree_Base::TmemberIndex

Definition at line 114 of file Cdd_tree_.hpp.

TmemberIndex [11/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CCdd_Viewer_Base::TmemberIndex

Definition at line 120 of file Cdd_Viewer_.hpp.

TmemberIndex [12/22]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CCdd_Viewer_Rect_Base::TmemberIndex

Definition at line 98 of file Cdd_Viewer_Rect_.hpp.

TmemberIndex [13/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CDomain_parent_Base::TmemberIndex

Definition at line 123 of file Domain_parent_.hpp.

TmemberIndex [14/22]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CGlobal_id_Base::TmemberIndex

Definition at line 104 of file Global_id_.hpp.

TmemberIndex [15/22]

typedef Tparent::CMemberIndex<E_memberIndex, 6> CMatrix_Base::TmemberIndex

Definition at line 105 of file Matrix_.hpp.

TmemberIndex [16/22]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNode_annotation_Base::TmemberIndex

Definition at line 94 of file Node_annotation_.hpp.

TmemberIndex [17/22]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CReject_id_Base::TmemberIndex

Definition at line 99 of file Reject_id_.hpp.

TmemberIndex [18/22]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CSeqTree_node_Base::C_Children::C_Footprint::TmemberIndex

Definition at line 135 of file SeqTree_node_.hpp.

TmemberIndex [19/22]

typedef Tparent::CMemberIndex<E_memberIndex, 6> CSeqTree_node_Base::TmemberIndex

Definition at line 374 of file SeqTree_node_.hpp.

TmemberIndex [20/22]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CSequence_tree_Base::TmemberIndex

Definition at line 104 of file Sequence_tree_.hpp.

TmemberIndex [21/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CTriangle_Base::TmemberIndex

Definition at line 104 of file Triangle_.hpp.

TmemberIndex [22/22]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CUpdate_align_Base::TmemberIndex

Definition at line 116 of file Update_align_.hpp.

TModel_organisms

typedef CCdd_org_ref_set CCdd_pref_nodes_Base::TModel_organisms

Definition at line 87 of file Cdd_pref_nodes_.hpp.

TMotif

typedef string CAlign_annot_Base::TMotif

Definition at line 96 of file Align_annot_.hpp.

TMotifuse

typedef int CAlign_annot_Base::TMotifuse

Definition at line 97 of file Align_annot_.hpp.

TName [1/4]

typedef string CCdd_Base::TName

Definition at line 118 of file Cdd_.hpp.

TName [2/4]

typedef string CCdd_Script_Base::TName

Definition at line 96 of file Cdd_Script_.hpp.

TName [3/4]

typedef string CCdd_tree_Base::TName

Definition at line 95 of file Cdd_tree_.hpp.

TName [4/4]

typedef string CSeqTree_node_Base::TName

Definition at line 360 of file SeqTree_node_.hpp.

TNcolumns

typedef int CMatrix_Base::TNcolumns

Definition at line 90 of file Matrix_.hpp.

TNeighbors [1/2]

typedef CCdd_id_set CCdd_Base::TNeighbors

Definition at line 132 of file Cdd_.hpp.

TNeighbors [2/2]

typedef CCdd_id_set CCdd_tree_Base::TNeighbors

Definition at line 101 of file Cdd_tree_.hpp.

TNelements

typedef int CTriangle_Base::TNelements

Definition at line 93 of file Triangle_.hpp.

TNote

typedef string CNode_annotation_Base::TNote

Definition at line 86 of file Node_annotation_.hpp.

TNrows

typedef int CMatrix_Base::TNrows

Definition at line 91 of file Matrix_.hpp.

TNTerminalExt

typedef int CAlgorithm_type_Base::TNTerminalExt

Definition at line 147 of file Algorithm_type_.hpp.

TOld_root

typedef CCdd_id_set CCdd_descr_Base::TOld_root

Definition at line 231 of file Cdd_descr_.hpp.

TOptional_nodes

typedef CCdd_org_ref_set CCdd_pref_nodes_Base::TOptional_nodes

Definition at line 88 of file Cdd_pref_nodes_.hpp.

TOthername

typedef string CCdd_descr_Base::TOthername

Definition at line 219 of file Cdd_descr_.hpp.

Tparent [1/67]

typedef CAlgorithm_type_Base CAlgorithm_type::Tparent

private

Definition at line 67 of file Algorithm_type.hpp.

Tparent [2/67]

typedef CSerialObject CAlgorithm_type_Base::Tparent

private

Definition at line 70 of file Algorithm_type_.hpp.

Tparent [3/67]

typedef CAlign_annot_Base CAlign_annot::Tparent

private

Definition at line 67 of file Align_annot.hpp.

Tparent [4/67]

typedef CSerialObject CAlign_annot_Base::Tparent

private

Definition at line 80 of file Align_annot_.hpp.

Tparent [5/67]

typedef CAlign_annot_set_Base CAlign_annot_set::Tparent

private

Definition at line 67 of file Align_annot_set.hpp.

Tparent [6/67]

typedef CSerialObject CAlign_annot_set_Base::Tparent

private

Definition at line 78 of file Align_annot_set_.hpp.

Tparent [7/67]

typedef CSerialObject CCdd_Base::Tparent

private

Definition at line 107 of file Cdd_.hpp.

TParent [1/2]

typedef CCdd_id CCdd_Base::TParent

Definition at line 129 of file Cdd_.hpp.

Tparent [8/67]

typedef CCdd_book_ref_Base CCdd_book_ref::Tparent

private

Definition at line 67 of file Cdd_book_ref.hpp.

Tparent [9/67]

typedef CSerialObject CCdd_book_ref_Base::Tparent

private

Definition at line 75 of file Cdd_book_ref_.hpp.

Tparent [10/67]

typedef CCdd_descr_Base CCdd_descr::Tparent

private

Definition at line 67 of file Cdd_descr.hpp.

Tparent [11/67]

typedef CSerialObject CCdd_descr_Base::Tparent

private

Definition at line 91 of file Cdd_descr_.hpp.

Tparent [12/67]

typedef CCdd_descr_set_Base CCdd_descr_set::Tparent

private

Definition at line 67 of file Cdd_descr_set.hpp.

Tparent [13/67]

typedef CSerialObject CCdd_descr_set_Base::Tparent

private

Definition at line 78 of file Cdd_descr_set_.hpp.

Tparent [14/67]

typedef CCdd_id_Base CCdd_id::Tparent

private

Definition at line 67 of file Cdd_id.hpp.

Tparent [15/67]

typedef CSerialObject CCdd_id_Base::Tparent

private

Definition at line 74 of file Cdd_id_.hpp.

Tparent [16/67]

typedef CCdd_id_set_Base CCdd_id_set::Tparent

private

Definition at line 67 of file Cdd_id_set.hpp.

Tparent [17/67]

typedef CSerialObject CCdd_id_set_Base::Tparent

private

Definition at line 78 of file Cdd_id_set_.hpp.

Tparent [18/67]

typedef CCdd_org_ref_Base CCdd_org_ref::Tparent

private

Definition at line 67 of file Cdd_org_ref.hpp.

Tparent [19/67]

typedef CSerialObject CCdd_org_ref_Base::Tparent

private

Definition at line 79 of file Cdd_org_ref_.hpp.

Tparent [20/67]

typedef CCdd_org_ref_set_Base CCdd_org_ref_set::Tparent

private

Definition at line 67 of file Cdd_org_ref_set.hpp.

Tparent [21/67]

typedef CSerialObject CCdd_org_ref_set_Base::Tparent

private

Definition at line 78 of file Cdd_org_ref_set_.hpp.

Tparent [22/67]

typedef CCdd_pref_node_descr_Base CCdd_pref_node_descr::Tparent

private

Definition at line 67 of file Cdd_pref_node_descr.hpp.

Tparent [23/67]

typedef CSerialObject CCdd_pref_node_descr_Base::Tparent

private

Definition at line 78 of file Cdd_pref_node_descr_.hpp.

Tparent [24/67]

typedef CCdd_pref_node_descr_set_Base CCdd_pref_node_descr_set::Tparent

private

Definition at line 67 of file Cdd_pref_node_descr_set.hpp.

Tparent [25/67]

typedef CSerialObject CCdd_pref_node_descr_set_Base::Tparent

private

Definition at line 78 of file Cdd_pref_node_descr_set_.hpp.

Tparent [26/67]

typedef CCdd_pref_nodes_Base CCdd_pref_nodes::Tparent

private

Definition at line 67 of file Cdd_pref_nodes.hpp.

Tparent [27/67]

typedef CSerialObject CCdd_pref_nodes_Base::Tparent

private

Definition at line 75 of file Cdd_pref_nodes_.hpp.

Tparent [28/67]

typedef CCdd_Project_Base CCdd_Project::Tparent

private

Definition at line 67 of file Cdd_Project.hpp.

Tparent [29/67]

typedef CSerialObject CCdd_Project_Base::Tparent

private

Definition at line 84 of file Cdd_Project_.hpp.

Tparent [30/67]

typedef CCdd_repeat_Base CCdd_repeat::Tparent

private

Definition at line 67 of file Cdd_repeat.hpp.

Tparent [31/67]

typedef CSerialObject CCdd_repeat_Base::Tparent

private

Definition at line 76 of file Cdd_repeat_.hpp.

Tparent [32/67]

typedef CCdd_Script_Base CCdd_Script::Tparent

private

Definition at line 67 of file Cdd_Script.hpp.

Tparent [33/67]

typedef CSerialObject CCdd_Script_Base::Tparent

private

Definition at line 74 of file Cdd_Script_.hpp.

Tparent [34/67]

typedef CCdd_set_Base CCdd_set::Tparent

private

Definition at line 67 of file Cdd_set.hpp.

Tparent [35/67]

typedef CSerialObject CCdd_set_Base::Tparent

private

Definition at line 78 of file Cdd_set_.hpp.

Tparent [36/67]

typedef CCdd_tree_Base CCdd_tree::Tparent

private

Definition at line 67 of file Cdd_tree.hpp.

Tparent [37/67]

typedef CSerialObject CCdd_tree_Base::Tparent

private

Definition at line 84 of file Cdd_tree_.hpp.

TParent [2/2]

typedef CCdd_id CCdd_tree_Base::TParent

Definition at line 98 of file Cdd_tree_.hpp.

Tparent [38/67]

typedef CCdd_tree_set_Base CCdd_tree_set::Tparent

private

Definition at line 67 of file Cdd_tree_set.hpp.

Tparent [39/67]

typedef CSerialObject CCdd_tree_set_Base::Tparent

private

Definition at line 78 of file Cdd_tree_set_.hpp.

Tparent [40/67]

typedef CCdd_Viewer_Base CCdd_Viewer::Tparent

private

Definition at line 67 of file Cdd_Viewer.hpp.

Tparent [41/67]

typedef CSerialObject CCdd_Viewer_Base::Tparent

private

Definition at line 79 of file Cdd_Viewer_.hpp.

Tparent [42/67]

typedef CCdd_Viewer_Rect_Base CCdd_Viewer_Rect::Tparent

private

Definition at line 67 of file Cdd_Viewer_Rect.hpp.

Tparent [43/67]

typedef CSerialObject CCdd_Viewer_Rect_Base::Tparent

private

Definition at line 74 of file Cdd_Viewer_Rect_.hpp.

Tparent [44/67]

typedef CDomain_parent_Base CDomain_parent::Tparent

private

Definition at line 67 of file Domain_parent.hpp.

Tparent [45/67]

typedef CSerialObject CDomain_parent_Base::Tparent

private

Definition at line 90 of file Domain_parent_.hpp.

Tparent [46/67]

typedef CFeature_evidence_Base CFeature_evidence::Tparent

private

Definition at line 67 of file Feature_evidence.hpp.

Tparent [47/67]

typedef CSerialObject CFeature_evidence_Base::Tparent

private

Definition at line 81 of file Feature_evidence_.hpp.

Tparent [48/67]

typedef CGlobal_id_Base CGlobal_id::Tparent

private

Definition at line 67 of file Global_id.hpp.

Tparent [49/67]

typedef CSerialObject CGlobal_id_Base::Tparent

private

Definition at line 80 of file Global_id_.hpp.

Tparent [50/67]

typedef CMatrix_Base CMatrix::Tparent

private

Definition at line 67 of file Matrix.hpp.

Tparent [51/67]

typedef CSerialObject CMatrix_Base::Tparent

private

Definition at line 79 of file Matrix_.hpp.

Tparent [52/67]

typedef CNode_annotation_Base CNode_annotation::Tparent

private

Definition at line 67 of file Node_annotation.hpp.

Tparent [53/67]

typedef CSerialObject CNode_annotation_Base::Tparent

private

Definition at line 74 of file Node_annotation_.hpp.

Tparent [54/67]

typedef CReject_id_Base CReject_id::Tparent

private

Definition at line 67 of file Reject_id.hpp.

Tparent [55/67]

typedef CSerialObject CReject_id_Base::Tparent

private

Definition at line 79 of file Reject_id_.hpp.

Tparent [56/67]

typedef CSeqTree_node_Base CSeqTree_node::Tparent

private

Definition at line 67 of file SeqTree_node.hpp.

Tparent [57/67]

typedef CSerialObject CSeqTree_node_Base::Tparent

private

Definition at line 81 of file SeqTree_node_.hpp.

Tparent [58/67]

typedef CSerialObject CSeqTree_node_Base::C_Children::Tparent

private

Definition at line 98 of file SeqTree_node_.hpp.

Tparent [59/67]

typedef CSerialObject CSeqTree_node_Base::C_Children::C_Footprint::Tparent

private

Definition at line 115 of file SeqTree_node_.hpp.

Tparent [60/67]

typedef CSequence_tree_Base CSequence_tree::Tparent

private

Definition at line 67 of file Sequence_tree.hpp.

Tparent [61/67]

typedef CSerialObject CSequence_tree_Base::Tparent

private

Definition at line 80 of file Sequence_tree_.hpp.

Tparent [62/67]

typedef CTriangle_Base CTriangle::Tparent

private

Definition at line 67 of file Triangle.hpp.

Tparent [63/67]

typedef CSerialObject CTriangle_Base::Tparent

private

Definition at line 82 of file Triangle_.hpp.

Tparent [64/67]

typedef CUpdate_align_Base CUpdate_align::Tparent

private

Definition at line 67 of file Update_align.hpp.

Tparent [65/67]

typedef CSerialObject CUpdate_align_Base::Tparent

private

Definition at line 82 of file Update_align_.hpp.

Tparent [66/67]

typedef CUpdate_comment_Base CUpdate_comment::Tparent

private

Definition at line 67 of file Update_comment.hpp.

Tparent [67/67]

typedef CSerialObject CUpdate_comment_Base::Tparent

private

Definition at line 83 of file Update_comment_.hpp.

TParent_tax_id

typedef int CCdd_org_ref_Base::TParent_tax_id

Definition at line 92 of file Cdd_org_ref_.hpp.

TParent_type

typedef int CDomain_parent_Base::TParent_type

Definition at line 112 of file Domain_parent_.hpp.

TParentid

typedef CCdd_id CDomain_parent_Base::TParentid

Definition at line 113 of file Domain_parent_.hpp.

TPending

typedef list< CRef< CUpdate_align > > CCdd_Base::TPending

Definition at line 133 of file Cdd_.hpp.

TPosfreq

typedef CMatrix CCdd_Base::TPosfreq

Definition at line 126 of file Cdd_.hpp.

TPreferred_nodes

typedef CCdd_org_ref_set CCdd_pref_nodes_Base::TPreferred_nodes

Definition at line 86 of file Cdd_pref_nodes_.hpp.

TPresentInChildCD

typedef string CNode_annotation_Base::TPresentInChildCD

Definition at line 85 of file Node_annotation_.hpp.

TProfile_range

typedef CSeq_interval CCdd_Base::TProfile_range

Definition at line 124 of file Cdd_.hpp.

TProject_id

typedef int CCdd_Project_Base::TProject_id

Definition at line 104 of file Cdd_Project_.hpp.

TRank

typedef string CCdd_org_ref_Base::TRank

Definition at line 93 of file Cdd_org_ref_.hpp.

TReadonly_status

typedef int CCdd_descr_Base::TReadonly_status

Definition at line 233 of file Cdd_descr_.hpp.

TRect

typedef CCdd_Viewer_Rect CCdd_Viewer_Base::TRect

Definition at line 110 of file Cdd_Viewer_.hpp.

TReference [1/4]

typedef CPub CCdd_descr_Base::TReference

Definition at line 222 of file Cdd_descr_.hpp.

TReference [2/4]

typedef COrg_ref CCdd_org_ref_Base::TReference

Definition at line 90 of file Cdd_org_ref_.hpp.

TReference [3/4]

typedef CPub CFeature_evidence_Base::TReference

Definition at line 155 of file Feature_evidence_.hpp.

TReference [4/4]

typedef CPub CUpdate_comment_Base::TReference

Definition at line 160 of file Update_comment_.hpp.

TReject_loc

typedef CSeq_loc CUpdate_comment_Base::TReject_loc

Definition at line 159 of file Update_comment_.hpp.

TRejects

typedef list< CRef< CReject_id > > CCdd_Base::TRejects

Definition at line 134 of file Cdd_.hpp.

TRelease

typedef string CGlobal_id_Base::TRelease

Definition at line 92 of file Global_id_.hpp.

TRepeats

typedef CCdd_repeat CCdd_descr_Base::TRepeats

Definition at line 230 of file Cdd_descr_.hpp.

TReplaces

typedef CSeq_loc CUpdate_comment_Base::TReplaces

Definition at line 158 of file Update_comment_.hpp.

TRids

typedef list< string > CCdd_Project_Base::TRids

Definition at line 101 of file Cdd_Project_.hpp.

TRoot

typedef CSeqTree_node CSequence_tree_Base::TRoot

Definition at line 94 of file Sequence_tree_.hpp.

TRow_labels

typedef list< string > CMatrix_Base::TRow_labels

Definition at line 92 of file Matrix_.hpp.

TRowId

typedef int CSeqTree_node_Base::C_Children::C_Footprint::TRowId

Definition at line 127 of file SeqTree_node_.hpp.

TScale_factor

typedef int CMatrix_Base::TScale_factor

Definition at line 93 of file Matrix_.hpp.

TScore_Matrix

typedef int CAlgorithm_type_Base::TScore_Matrix

Definition at line 143 of file Algorithm_type_.hpp.

TScoremat

typedef CMatrix CCdd_Base::TScoremat

Definition at line 127 of file Cdd_.hpp.

TScoreparams

typedef CPssmWithParameters CCdd_Base::TScoreparams

Definition at line 140 of file Cdd_.hpp.

TScores

typedef CScore_set CTriangle_Base::TScores

Definition at line 94 of file Triangle_.hpp.

TScoring_Scheme

typedef int CAlgorithm_type_Base::TScoring_Scheme

Definition at line 141 of file Algorithm_type_.hpp.

TScrapbook

typedef list< string > CCdd_descr_Base::TScrapbook

Definition at line 228 of file Cdd_descr_.hpp.

TScripts

typedef list< CRef< CCdd_Script > > CCdd_Project_Base::TScripts

Definition at line 99 of file Cdd_Project_.hpp.

TSeqannot [1/3]

typedef list< CRef< CSeq_annot > > CCdd_Base::TSeqannot

Definition at line 121 of file Cdd_.hpp.

TSeqannot [2/3]

typedef CSeq_annot CDomain_parent_Base::TSeqannot

Definition at line 114 of file Domain_parent_.hpp.

TSeqannot [3/3]

typedef CSeq_annot CUpdate_align_Base::TSeqannot

Definition at line 106 of file Update_align_.hpp.

TSeqfeat

typedef CSeq_feat CFeature_evidence_Base::TSeqfeat

Definition at line 157 of file Feature_evidence_.hpp.

TSeqRange

typedef CSeq_interval CSeqTree_node_Base::C_Children::C_Footprint::TSeqRange

Definition at line 126 of file SeqTree_node_.hpp.

TSeqtree

typedef CSequence_tree CCdd_Base::TSeqtree

Definition at line 141 of file Cdd_.hpp.

TSequences

typedef CSeq_entry CCdd_Base::TSequences

Definition at line 123 of file Cdd_.hpp.

TSiblings [1/2]

typedef CCdd_id_set CCdd_Base::TSiblings

Definition at line 131 of file Cdd_.hpp.

TSiblings [2/2]

typedef CCdd_id_set CCdd_tree_Base::TSiblings

Definition at line 100 of file Cdd_tree_.hpp.

TSource

typedef string CCdd_descr_Base::TSource

Definition at line 225 of file Cdd_descr_.hpp.

TSource_id

typedef CCdd_id_set CCdd_descr_Base::TSource_id

Definition at line 229 of file Cdd_descr_.hpp.

TStatus

typedef int CCdd_descr_Base::TStatus

Definition at line 226 of file Cdd_descr_.hpp.

TStyle_dictionary

typedef CCn3d_style_dictionary CCdd_Base::TStyle_dictionary

Definition at line 137 of file Cdd_.hpp.

TSubelementid

typedef int CCdd_book_ref_Base::TSubelementid

Definition at line 105 of file Cdd_book_ref_.hpp.

TTax_source

typedef COrg_ref CCdd_descr_Base::TTax_source

Definition at line 224 of file Cdd_descr_.hpp.

TTextelement

typedef ETextelement CCdd_book_ref_Base::TTextelement

Definition at line 103 of file Cdd_book_ref_.hpp.

TTitle

typedef string CCdd_descr_Base::TTitle

Definition at line 236 of file Cdd_descr_.hpp.

TTop

typedef int CCdd_Viewer_Rect_Base::TTop

Definition at line 85 of file Cdd_Viewer_Rect_.hpp.

TTree_scope

typedef int CAlgorithm_type_Base::TTree_scope

Definition at line 149 of file Algorithm_type_.hpp.

TTrunc_master

typedef CBioseq CCdd_Base::TTrunc_master

Definition at line 125 of file Cdd_.hpp.

TType [1/3]

typedef int CAlign_annot_Base::TType

Definition at line 94 of file Align_annot_.hpp.

TType [2/3]

typedef int CCdd_Script_Base::TType

Definition at line 95 of file Cdd_Script_.hpp.

TType [3/3]

typedef int CUpdate_align_Base::TType

Definition at line 107 of file Update_align_.hpp.

TUid

typedef int CCdd_id_Base::TUid

Definition at line 144 of file Cdd_id_.hpp.

TUpdate_date [1/2]

typedef CDate CCdd_descr_Base::TUpdate_date

Definition at line 227 of file Cdd_descr_.hpp.

TUpdate_date [2/2]

typedef CDate CCdd_Project_Base::TUpdate_date

Definition at line 103 of file Cdd_Project_.hpp.

TUser_annotations

typedef CCn3d_user_annotations CCdd_Base::TUser_annotations

Definition at line 138 of file Cdd_.hpp.

TVersion

typedef int CGlobal_id_Base::TVersion

Definition at line 93 of file Global_id_.hpp.

TViewers

typedef list< CRef< CCdd_Viewer > > CCdd_Project_Base::TViewers

Definition at line 97 of file Cdd_Project_.hpp.

TWidth

typedef int CCdd_Viewer_Rect_Base::TWidth

Definition at line 87 of file Cdd_Viewer_Rect_.hpp.

Enumeration Type Documentation

E_Choice [1/6]

enum CCdd_descr_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Othername	alternative names for the CDD if domain has several common names
e_Category	intracellular, extracellular, etc. to record spatial and/or temporal expression in free-text format
e_Comment	this is where descriptions go
e_Reference	a citation describing the domain
e_Create_date	Date of first creation/dump.
e_Tax_source	holds the highest common tax node
e_Source	the database the seeds were created from, e.g. SMART, PFAM, etc..
e_Status
e_Update_date	Date of last version change.
e_Scrapbook	for storing curation notes those won't make it into public distributions
e_Source_id	for linking back to source db
e_Repeats	to record repeat counts
e_Old_root	to record short-term history
e_Curation_status
e_Readonly_status
e_Book_ref	links to Entrez/books
e_Attribution	add citations and/or author names
e_Title	hold short descriptive text

Definition at line 145 of file Cdd_descr_.hpp.

E_Choice [2/6]

enum CCdd_id_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Uid	for synchronization with Entrez holds PSSM-Ids
e_Gid	holds accession/version pairs

Definition at line 86 of file Cdd_id_.hpp.

E_Choice [3/6]

enum CCdd_pref_node_descr_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Create_date
e_Description

Definition at line 90 of file Cdd_pref_node_descr_.hpp.

E_Choice [4/6]

enum CFeature_evidence_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Comment	so we can spell out what doesn't fit in any other category
e_Reference	evidence via a literature reference
e_Bsannot	evidence via Biostruc-features, such as structure superpositions
e_Seqfeat	evidence is a Sequence feature found elsewhere
e_Book_ref	evidence is a book chapter or figure

Definition at line 93 of file Feature_evidence_.hpp.

E_Choice [5/6]

enum CSeqTree_node_Base::C_Children::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Children
e_Footprint

Definition at line 230 of file SeqTree_node_.hpp.

E_Choice [6/6]

enum CUpdate_comment_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Comment	free text to describe nature of Update-align
e_Addthis	suggestion for inclusion in the CD without corresponding alignment
e_Replaces	if one or several alignment rows are to be replaced by the Update-align
e_Reject_loc	if used with Reject-id, specify a location on a sequence which should not be used
e_Reference	if update alignment imported from citation and for whenever it seems necessary to cite

Definition at line 95 of file Update_comment_.hpp.

E_ChoiceStopper [1/6]

enum CCdd_descr_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Title+1

Definition at line 167 of file Cdd_descr_.hpp.

E_ChoiceStopper [2/6]

enum CCdd_id_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Gid+1

Definition at line 92 of file Cdd_id_.hpp.

E_ChoiceStopper [3/6]

enum CCdd_pref_node_descr_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Description+1

Definition at line 96 of file Cdd_pref_node_descr_.hpp.

E_ChoiceStopper [4/6]

enum CFeature_evidence_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Book_ref+1

Definition at line 102 of file Feature_evidence_.hpp.

E_ChoiceStopper [5/6]

enum CSeqTree_node_Base::C_Children::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Footprint+1

Definition at line 236 of file SeqTree_node_.hpp.

E_ChoiceStopper [6/6]

enum CUpdate_comment_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Reference+1

Definition at line 104 of file Update_comment_.hpp.

E_memberIndex [1/22]

enum CAlgorithm_type_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_scoring_Scheme
e_clustering_Method
e_score_Matrix
e_gapOpen
e_gapExtend
e_gapScaleFactor
e_nTerminalExt
e_cTerminalExt
e_tree_scope
e_coloring_scope

Definition at line 153 of file Algorithm_type_.hpp.

E_memberIndex [2/22]

enum CAlign_annot_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_location
e_description
e_evidence
e_type
e_aliases
e_motif
e_motifuse

Definition at line 100 of file Align_annot_.hpp.

E_memberIndex [3/22]

enum CCdd_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_name
e_id
e_description
e_seqannot
e_features
e_sequences
e_profile_range
e_trunc_master
e_posfreq
e_scoremat
e_distance
e_parent
e_children
e_siblings
e_neighbors
e_pending
e_rejects
e_master3d
e_alignannot
e_style_dictionary
e_user_annotations
e_ancestors
e_scoreparams
e_seqtree

Definition at line 144 of file Cdd_.hpp.

E_memberIndex [4/22]

enum CCdd_book_ref_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_bookname
e_textelement
e_elementid
e_subelementid
e_celementid
e_csubelementid

Definition at line 110 of file Cdd_book_ref_.hpp.

E_memberIndex [5/22]

enum CCdd_org_ref_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_reference
e_active
e_parent_tax_id
e_rank

Definition at line 96 of file Cdd_org_ref_.hpp.

E_memberIndex [6/22]

enum CCdd_pref_nodes_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_preferred_nodes
e_model_organisms
e_optional_nodes
e_description

Definition at line 92 of file Cdd_pref_nodes_.hpp.

E_memberIndex [7/22]

enum CCdd_Project_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_cds
e_cdcolor
e_viewers
e_log
e_scripts
e_id
e_rids
e_create_date
e_update_date
e_project_id

Definition at line 107 of file Cdd_Project_.hpp.

E_memberIndex [8/22]

enum CCdd_repeat_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_count
e_location
e_avglen

Definition at line 92 of file Cdd_repeat_.hpp.

E_memberIndex [9/22]

enum CCdd_Script_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_type
e_name
e_commands

Definition at line 100 of file Cdd_Script_.hpp.

E_memberIndex [10/22]

enum CCdd_tree_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_name
e_id
e_description
e_parent
e_children
e_siblings
e_neighbors

Definition at line 104 of file Cdd_tree_.hpp.

E_memberIndex [11/22]

enum CCdd_Viewer_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_ctrl
e_rect
e_accessions

Definition at line 114 of file Cdd_Viewer_.hpp.

E_memberIndex [12/22]

enum CCdd_Viewer_Rect_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_top
e_left
e_width
e_height

Definition at line 91 of file Cdd_Viewer_Rect_.hpp.

E_memberIndex [13/22]

enum CDomain_parent_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_parent_type
e_parentid
e_seqannot

Definition at line 117 of file Domain_parent_.hpp.

E_memberIndex [14/22]

enum CGlobal_id_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_accession
e_release
e_version
e_database

Definition at line 97 of file Global_id_.hpp.

E_memberIndex [15/22]

enum CMatrix_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_ncolumns
e_nrows
e_row_labels
e_scale_factor
e_columns
e__allMandatory
e_Attlist
e_BvarQ
e_DomainQ
e_ContExp

Definition at line 97 of file Matrix_.hpp.

E_memberIndex [16/22]

enum CNode_annotation_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_presentInChildCD
e_note

Definition at line 89 of file Node_annotation_.hpp.

E_memberIndex [17/22]

enum CReject_id_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_description
e_ids

Definition at line 94 of file Reject_id_.hpp.

E_memberIndex [18/22]

enum CSeqTree_node_Base::C_Children::C_Footprint::E_memberIndex

strong

Enumerator
e__allMandatory
e_seqRange
e_rowId

Definition at line 130 of file SeqTree_node_.hpp.

E_memberIndex [19/22]

enum CSeqTree_node_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_isAnnotated
e_name
e_distance
e_children
e_annotation

Definition at line 366 of file SeqTree_node_.hpp.

E_memberIndex [20/22]

enum CSequence_tree_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_cdAccession
e_algorithm
e_isAnnotated
e_root

Definition at line 97 of file Sequence_tree_.hpp.

E_memberIndex [21/22]

enum CTriangle_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_nelements
e_scores
e_div_ranks

Definition at line 98 of file Triangle_.hpp.

E_memberIndex [22/22]

enum CUpdate_align_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_description
e_seqannot
e_type

Definition at line 110 of file Update_align_.hpp.

EClustering_Method

enum CAlgorithm_type_Base::EClustering_Method

Enumerator
eClustering_Method_unassigned
eClustering_Method_single_linkage
eClustering_Method_neighbor_joining
eClustering_Method_fast_minimum_evolution
eClustering_Method_other

Definition at line 96 of file Algorithm_type_.hpp.

EColoring_scope

enum CAlgorithm_type_Base::EColoring_scope

Enumerator
eColoring_scope_allDescendants
eColoring_scope_immediateChildrenOnly
eColoring_scope_other

Definition at line 131 of file Algorithm_type_.hpp.

ECtrl

enum CCdd_Viewer_Base::ECtrl

viewer type

Enumerator
eCtrl_unassigned
eCtrl_cd_info
eCtrl_align_annot
eCtrl_seq_list
eCtrl_seq_tree
eCtrl_merge_preview
eCtrl_cross_hits
eCtrl_notes
eCtrl_tax_tree
eCtrl_dart
eCtrl_dart_selected_rows
eCtrl_other

Definition at line 90 of file Cdd_Viewer_.hpp.

ECuration_status

enum CCdd_descr_Base::ECuration_status

Enumerator
eCuration_status_unassigned	to record curation status
eCuration_status_prein	when CD is checked out from
eCuration_status_ofc	the tracking database, for
eCuration_status_iac	use within curation software
eCuration_status_ofv1
eCuration_status_iav1
eCuration_status_ofv2
eCuration_status_iav2
eCuration_status_postin
eCuration_status_other

Definition at line 117 of file Cdd_descr_.hpp.

EParent_type

enum CDomain_parent_Base::EParent_type

Enumerator
eParent_type_classical	the classification of parent child relations
eParent_type_fusion
eParent_type_deletion
eParent_type_permutation
eParent_type_other

Definition at line 100 of file Domain_parent_.hpp.

EReadonly_status

enum CCdd_descr_Base::EReadonly_status

Enumerator
eReadonly_status_unassigned	to record read-only status
eReadonly_status_readonly	when CD is checked out from
eReadonly_status_readwrite	the tracking database, for
eReadonly_status_other	use within curation software

Definition at line 133 of file Cdd_descr_.hpp.

EScore_Matrix

enum CAlgorithm_type_Base::EScore_Matrix

Enumerator
eScore_Matrix_unassigned
eScore_Matrix_blosum45
eScore_Matrix_blosum62
eScore_Matrix_blosum80
eScore_Matrix_pam30
eScore_Matrix_pam70
eScore_Matrix_pam250
eScore_Matrix_other

Definition at line 107 of file Algorithm_type_.hpp.

EScoring_Scheme

enum CAlgorithm_type_Base::EScoring_Scheme

Enumerator
eScoring_Scheme_unassigned
eScoring_Scheme_percent_id
eScoring_Scheme_kimura_corrected
eScoring_Scheme_aligned_score
eScoring_Scheme_aligned_score_ext
eScoring_Scheme_aligned_score_filled
eScoring_Scheme_blast_footprint
eScoring_Scheme_blast_full
eScoring_Scheme_hybrid_aligned_score
eScoring_Scheme_other

Definition at line 80 of file Algorithm_type_.hpp.

EStatus

enum CCdd_descr_Base::EStatus

Enumerator
eStatus_unassigned
eStatus_finished_ok	a public curated CD
eStatus_pending_release	needs work done, not yet released
eStatus_other_asis	imported as-is, immediate release
eStatus_matrix_only	CD holds a Psi-Blast PSSM only, does not contain alignment data.
eStatus_update_running	has been flagged for update (in queue)
eStatus_auto_updated	update finished, no work necessary
eStatus_claimed	is earmarked for curation
eStatus_curated_complete	public curated member of a completed family
eStatus_other	for CD production?

Definition at line 101 of file Cdd_descr_.hpp.

ETextelement

enum CCdd_book_ref_Base::ETextelement

Enumerator
eTextelement_unassigned	type of element
eTextelement_section	a section or paragraph
eTextelement_figgrp	a figure or set of figures
eTextelement_table	a table
eTextelement_chapter	a whole chapter
eTextelement_biblist	a lisf of references
eTextelement_box	an inserted box
eTextelement_glossary	glossary
eTextelement_appendix	appendix
eTextelement_other

Definition at line 85 of file Cdd_book_ref_.hpp.

ETree_scope

enum CAlgorithm_type_Base::ETree_scope

Enumerator
eTree_scope_allDescendants
eTree_scope_immediateChildrenOnly
eTree_scope_selfOnly
eTree_scope_other

Definition at line 121 of file Algorithm_type_.hpp.

EType [1/2]

enum CCdd_Script_Base::EType

Enumerator
eType_unassigned
eType_user_recorded
eType_server_generated
eType_other

Definition at line 84 of file Cdd_Script_.hpp.

EType [2/2]

enum CUpdate_align_Base::EType

Enumerator
eType_unassigned
eType_update
eType_update_3d
eType_demoted
eType_demoted_3d
eType_other

Definition at line 92 of file Update_align_.hpp.

Function Documentation

C_Children() [1/2]

CSeqTree_node_Base::C_Children::C_Children ( const C_Children &  )

private

C_Children() [2/2]

END_CHOICE_INFO CSeqTree_node_Base::C_Children::C_Children

(

void

)

Definition at line 189 of file SeqTree_node_.cpp.

C_Footprint() [1/2]

CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint ( const C_Footprint &  )

private

C_Footprint() [2/2]

END_CLASS_INFO CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint

(

void

)

Definition at line 85 of file SeqTree_node_.cpp.

References CObject::IsAllocatedInPool(), CSeqTree_node_Base::C_Children::C_Footprint::m_set_State, and CSeqTree_node_Base::C_Children::C_Footprint::ResetSeqRange().

CAlgorithm_type() [1/2]

CAlgorithm_type::CAlgorithm_type ( const CAlgorithm_type &  value )

private

CAlgorithm_type() [2/2]

CAlgorithm_type::CAlgorithm_type ( void  )

inline

Definition at line 86 of file Algorithm_type.hpp.

CAlgorithm_type_Base() [1/2]

CAlgorithm_type_Base::CAlgorithm_type_Base ( const CAlgorithm_type_Base &  )

private

CAlgorithm_type_Base() [2/2]

END_CLASS_INFO CAlgorithm_type_Base::CAlgorithm_type_Base

(

void

)

Definition at line 149 of file Algorithm_type_.cpp.

References CAlgorithm_type_Base::m_set_State.

CAlign_annot() [1/2]

CAlign_annot::CAlign_annot ( const CAlign_annot &  value )

private

CAlign_annot() [2/2]

CAlign_annot::CAlign_annot ( void  )

inline

Definition at line 86 of file Align_annot.hpp.

CAlign_annot_Base() [1/2]

CAlign_annot_Base::CAlign_annot_Base ( const CAlign_annot_Base &  )

private

CAlign_annot_Base() [2/2]

END_CLASS_INFO CAlign_annot_Base::CAlign_annot_Base

(

void

)

Definition at line 118 of file Align_annot_.cpp.

References CObject::IsAllocatedInPool(), CAlign_annot_Base::m_set_State, and CAlign_annot_Base::ResetLocation().

CAlign_annot_set() [1/2]

CAlign_annot_set::CAlign_annot_set ( const CAlign_annot_set &  value )

private

CAlign_annot_set() [2/2]

CAlign_annot_set::CAlign_annot_set ( void  )

inline

Definition at line 86 of file Align_annot_set.hpp.

CAlign_annot_set_Base() [1/2]

CAlign_annot_set_Base::CAlign_annot_set_Base ( const CAlign_annot_set_Base &  )

private

CAlign_annot_set_Base() [2/2]

END_CLASS_INFO CAlign_annot_set_Base::CAlign_annot_set_Base

(

void

)

Definition at line 68 of file Align_annot_set_.cpp.

References CAlign_annot_set_Base::m_set_State.

CanGet() [1/7]

bool CAlign_annot_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Align_annot_set_.hpp.

CanGet() [2/7]

bool CCdd_descr_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_descr_set_.hpp.

CanGet() [3/7]

bool CCdd_id_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_id_set_.hpp.

CanGet() [4/7]

bool CCdd_org_ref_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_org_ref_set_.hpp.

CanGet() [5/7]

bool CCdd_pref_node_descr_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_pref_node_descr_set_.hpp.

CanGet() [6/7]

bool CCdd_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_set_.hpp.

CanGet() [7/7]

bool CCdd_tree_set_Base::CanGet ( void  ) const

inline

Check if it is safe to call Get method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 158 of file Cdd_tree_set_.hpp.

CanGetAccession()

bool CGlobal_id_Base::CanGetAccession ( void  ) const

inline

Check if it is safe to call GetAccession method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 300 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetAccession().

Referenced by CGlobal_id_Base::GetAccession().

CanGetAccessions()

bool CCdd_Viewer_Base::CanGetAccessions ( void  ) const

inline

Check if it is safe to call GetAccessions method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 332 of file Cdd_Viewer_.hpp.

CanGetActive()

bool CCdd_org_ref_Base::CanGetActive ( void  ) const

inline

Check if it is safe to call GetActive method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 323 of file Cdd_org_ref_.hpp.

CanGetAlgorithm()

bool CSequence_tree_Base::CanGetAlgorithm ( void  ) const

inline

Check if it is safe to call GetAlgorithm method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 341 of file Sequence_tree_.hpp.

CanGetAliases()

bool CAlign_annot_Base::CanGetAliases ( void  ) const

inline

Check if it is safe to call GetAliases method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 572 of file Align_annot_.hpp.

CanGetAlignannot()

bool CCdd_Base::CanGetAlignannot ( void  ) const

inline

Check if it is safe to call GetAlignannot method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1547 of file Cdd_.hpp.

References CCdd_Base::IsSetAlignannot().

Referenced by CCdd_Base::GetAlignannot().

CanGetAncestors()

bool CCdd_Base::CanGetAncestors ( void  ) const

inline

Check if it is safe to call GetAncestors method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1610 of file Cdd_.hpp.

CanGetAnnotation()

bool CSeqTree_node_Base::CanGetAnnotation ( void  ) const

inline

Check if it is safe to call GetAnnotation method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 908 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetAnnotation().

Referenced by SeqTreeAsnizer::fillSeqItem(), and CSeqTree_node_Base::GetAnnotation().

CanGetAvglen()

bool CCdd_repeat_Base::CanGetAvglen ( void  ) const

inline

Check if it is safe to call GetAvglen method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 317 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::IsSetAvglen().

Referenced by CCdd_repeat_Base::GetAvglen().

CanGetBookname()

bool CCdd_book_ref_Base::CanGetBookname ( void  ) const

inline

Check if it is safe to call GetBookname method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 389 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetBookname().

Referenced by CCdd_book_ref_Base::GetBookname().

CanGetCdAccession()

bool CSequence_tree_Base::CanGetCdAccession ( void  ) const

inline

Check if it is safe to call GetCdAccession method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 294 of file Sequence_tree_.hpp.

References CSequence_tree_Base::IsSetCdAccession().

Referenced by CSequence_tree_Base::GetCdAccession().

CanGetCdcolor()

bool CCdd_Project_Base::CanGetCdcolor ( void  ) const

inline

Check if it is safe to call GetCdcolor method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 538 of file Cdd_Project_.hpp.

CanGetCds()

bool CCdd_Project_Base::CanGetCds ( void  ) const

inline

Check if it is safe to call GetCds method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 513 of file Cdd_Project_.hpp.

CanGetCelementid()

bool CCdd_book_ref_Base::CanGetCelementid ( void  ) const

inline

Check if it is safe to call GetCelementid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 577 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetCelementid().

Referenced by CCdd_book_ref_Base::GetCelementid().

CanGetChildren() [1/3]

bool CCdd_Base::CanGetChildren ( void  ) const

inline

Check if it is safe to call GetChildren method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1409 of file Cdd_.hpp.

References CCdd_Base::IsSetChildren().

Referenced by CCdd_Base::GetChildren().

CanGetChildren() [2/3]

bool CCdd_tree_Base::CanGetChildren ( void  ) const

inline

Check if it is safe to call GetChildren method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 542 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetChildren().

Referenced by CCdd_tree_Base::GetChildren().

CanGetChildren() [3/3]

bool CSeqTree_node_Base::CanGetChildren ( void  ) const

inline

Check if it is safe to call GetChildren method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 878 of file SeqTree_node_.hpp.

Referenced by SeqTreeAsnizer::addChildNode(), and SeqTreeAsnizer::convertToSeqTree().

CanGetClustering_Method()

bool CAlgorithm_type_Base::CanGetClustering_Method ( void  ) const

inline

Check if it is safe to call GetClustering_Method method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 627 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetClustering_Method().

Referenced by CAlgorithm_type_Base::GetClustering_Method().

CanGetColoring_scope()

bool CAlgorithm_type_Base::CanGetColoring_scope ( void  ) const

inline

Check if it is safe to call GetColoring_scope method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1003 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetColoring_scope().

Referenced by CAlgorithm_type_Base::GetColoring_scope().

CanGetColumns()

bool CMatrix_Base::CanGetColumns ( void  ) const

inline

Check if it is safe to call GetColumns method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 483 of file Matrix_.hpp.

CanGetCommands()

bool CCdd_Script_Base::CanGetCommands ( void  ) const

inline

Check if it is safe to call GetCommands method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 352 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetCommands().

Referenced by CCdd_Script_Base::GetCommands().

CanGetCount()

bool CCdd_repeat_Base::CanGetCount ( void  ) const

inline

Check if it is safe to call GetCount method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 249 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::IsSetCount().

Referenced by CCdd_repeat_Base::GetCount().

CanGetCreate_date()

bool CCdd_Project_Base::CanGetCreate_date ( void  ) const

inline

Check if it is safe to call GetCreate_date method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 706 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetCreate_date().

Referenced by CCdd_Project_Base::GetCreate_date().

CanGetCsubelementid()

bool CCdd_book_ref_Base::CanGetCsubelementid ( void  ) const

inline

Check if it is safe to call GetCsubelementid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 624 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetCsubelementid().

Referenced by CCdd_book_ref_Base::GetCsubelementid().

CanGetCTerminalExt()

bool CAlgorithm_type_Base::CanGetCTerminalExt ( void  ) const

inline

Check if it is safe to call GetCTerminalExt method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 909 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetCTerminalExt().

Referenced by CAlgorithm_type_Base::GetCTerminalExt().

CanGetCtrl()

bool CCdd_Viewer_Base::CanGetCtrl ( void  ) const

inline

Check if it is safe to call GetCtrl method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 264 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::IsSetCtrl().

Referenced by CCdd_Viewer_Base::GetCtrl().

CanGetDatabase()

bool CGlobal_id_Base::CanGetDatabase ( void  ) const

inline

Check if it is safe to call GetDatabase method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 441 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetDatabase().

Referenced by CGlobal_id_Base::GetDatabase().

CanGetDescription() [1/6]

bool CAlign_annot_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 453 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetDescription().

Referenced by CAlign_annot_Base::GetDescription().

CanGetDescription() [2/6]

bool CCdd_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1195 of file Cdd_.hpp.

References CCdd_Base::IsSetDescription().

Referenced by CCdd_Base::GetDescription().

CanGetDescription() [3/6]

bool CCdd_pref_nodes_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 357 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::IsSetDescription().

Referenced by CCdd_pref_nodes_Base::GetDescription().

CanGetDescription() [4/6]

bool CCdd_tree_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 500 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetDescription().

Referenced by CCdd_tree_Base::GetDescription().

CanGetDescription() [5/6]

bool CReject_id_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 197 of file Reject_id_.hpp.

CanGetDescription() [6/6]

bool CUpdate_align_Base::CanGetDescription ( void  ) const

inline

Check if it is safe to call GetDescription method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 259 of file Update_align_.hpp.

CanGetDistance() [1/2]

bool CCdd_Base::CanGetDistance ( void  ) const

inline

Check if it is safe to call GetDistance method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1367 of file Cdd_.hpp.

References CCdd_Base::IsSetDistance().

Referenced by CCdd_Base::GetDistance().

CanGetDistance() [2/2]

bool CSeqTree_node_Base::CanGetDistance ( void  ) const

inline

Check if it is safe to call GetDistance method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 831 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetDistance().

Referenced by CSeqTree_node_Base::GetDistance().

CanGetDiv_ranks()

bool CTriangle_Base::CanGetDiv_ranks ( void  ) const

inline

Check if it is safe to call GetDiv_ranks method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 314 of file Triangle_.hpp.

CanGetElementid()

bool CCdd_book_ref_Base::CanGetElementid ( void  ) const

inline

Check if it is safe to call GetElementid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 483 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetElementid().

Referenced by CCdd_book_ref_Base::GetElementid().

CanGetEvidence()

bool CAlign_annot_Base::CanGetEvidence ( void  ) const

inline

Check if it is safe to call GetEvidence method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 500 of file Align_annot_.hpp.

CanGetFeatures()

bool CCdd_Base::CanGetFeatures ( void  ) const

inline

Check if it is safe to call GetFeatures method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1241 of file Cdd_.hpp.

References CCdd_Base::IsSetFeatures().

Referenced by CCdd_Base::GetFeatures().

CanGetGapExtend()

bool CAlgorithm_type_Base::CanGetGapExtend ( void  ) const

inline

Check if it is safe to call GetGapExtend method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 768 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapExtend().

Referenced by CAlgorithm_type_Base::GetGapExtend().

CanGetGapOpen()

bool CAlgorithm_type_Base::CanGetGapOpen ( void  ) const

inline

Check if it is safe to call GetGapOpen method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 721 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapOpen().

Referenced by CAlgorithm_type_Base::GetGapOpen().

CanGetGapScaleFactor()

bool CAlgorithm_type_Base::CanGetGapScaleFactor ( void  ) const

inline

Check if it is safe to call GetGapScaleFactor method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 815 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapScaleFactor().

Referenced by CAlgorithm_type_Base::GetGapScaleFactor().

CanGetHeight()

bool CCdd_Viewer_Rect_Base::CanGetHeight ( void  ) const

inline

Check if it is safe to call GetHeight method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 429 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetHeight().

Referenced by CCdd_Viewer_Rect_Base::GetHeight().

CanGetId() [1/3]

bool CCdd_Base::CanGetId ( void  ) const

inline

Check if it is safe to call GetId method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1165 of file Cdd_.hpp.

CanGetId() [2/3]

bool CCdd_Project_Base::CanGetId ( void  ) const

inline

Check if it is safe to call GetId method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 660 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetId().

Referenced by CCdd_Project_Base::GetId().

CanGetId() [3/3]

bool CCdd_tree_Base::CanGetId ( void  ) const

inline

Check if it is safe to call GetId method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 470 of file Cdd_tree_.hpp.

CanGetIds()

bool CReject_id_Base::CanGetIds ( void  ) const

inline

Check if it is safe to call GetIds method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 222 of file Reject_id_.hpp.

CanGetIsAnnotated() [1/2]

bool CSeqTree_node_Base::CanGetIsAnnotated ( void  ) const

inline

Check if it is safe to call GetIsAnnotated method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 734 of file SeqTree_node_.hpp.

CanGetIsAnnotated() [2/2]

bool CSequence_tree_Base::CanGetIsAnnotated ( void  ) const

inline

Check if it is safe to call GetIsAnnotated method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 371 of file Sequence_tree_.hpp.

CanGetLeft()

bool CCdd_Viewer_Rect_Base::CanGetLeft ( void  ) const

inline

Check if it is safe to call GetLeft method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 335 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetLeft().

Referenced by CCdd_Viewer_Rect_Base::GetLeft().

CanGetLocation() [1/2]

bool CAlign_annot_Base::CanGetLocation ( void  ) const

inline

Check if it is safe to call GetLocation method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 423 of file Align_annot_.hpp.

CanGetLocation() [2/2]

bool CCdd_repeat_Base::CanGetLocation ( void  ) const

inline

Check if it is safe to call GetLocation method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 296 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::IsSetLocation().

Referenced by CCdd_repeat_Base::GetLocation().

CanGetLog()

bool CCdd_Project_Base::CanGetLog ( void  ) const

inline

Check if it is safe to call GetLog method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 588 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetLog().

Referenced by CCdd_Project_Base::GetLog().

CanGetMaster3d()

bool CCdd_Base::CanGetMaster3d ( void  ) const

inline

Check if it is safe to call GetMaster3d method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1522 of file Cdd_.hpp.

CanGetModel_organisms()

bool CCdd_pref_nodes_Base::CanGetModel_organisms ( void  ) const

inline

Check if it is safe to call GetModel_organisms method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 315 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::IsSetModel_organisms().

Referenced by CPriorityTaxNodes::BuildMap(), and CCdd_pref_nodes_Base::GetModel_organisms().

CanGetMotif()

bool CAlign_annot_Base::CanGetMotif ( void  ) const

inline

Check if it is safe to call GetMotif method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 597 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetMotif().

Referenced by CAlign_annot_Base::GetMotif().

CanGetMotifuse()

bool CAlign_annot_Base::CanGetMotifuse ( void  ) const

inline

Check if it is safe to call GetMotifuse method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 644 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetMotifuse().

Referenced by CAlign_annot_Base::GetMotifuse().

CanGetName() [1/4]

bool CCdd_Base::CanGetName ( void  ) const

inline

Check if it is safe to call GetName method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1118 of file Cdd_.hpp.

References CCdd_Base::IsSetName().

Referenced by CCdd_Base::GetName().

CanGetName() [2/4]

bool CCdd_Script_Base::CanGetName ( void  ) const

inline

Check if it is safe to call GetName method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 305 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetName().

Referenced by CCdd_Script_Base::GetName().

CanGetName() [3/4]

bool CCdd_tree_Base::CanGetName ( void  ) const

inline

Check if it is safe to call GetName method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 423 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetName().

Referenced by CCdd_tree_Base::GetName().

CanGetName() [4/4]

bool CSeqTree_node_Base::CanGetName ( void  ) const

inline

Check if it is safe to call GetName method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 784 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetName().

Referenced by CSeqTree_node_Base::GetName().

CanGetNcolumns()

bool CMatrix_Base::CanGetNcolumns ( void  ) const

inline

Check if it is safe to call GetNcolumns method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 317 of file Matrix_.hpp.

References CMatrix_Base::IsSetNcolumns().

Referenced by CMatrix_Base::GetNcolumns().

CanGetNeighbors() [1/2]

bool CCdd_Base::CanGetNeighbors ( void  ) const

inline

Check if it is safe to call GetNeighbors method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1451 of file Cdd_.hpp.

References CCdd_Base::IsSetNeighbors().

Referenced by CCdd_Base::GetNeighbors().

CanGetNeighbors() [2/2]

bool CCdd_tree_Base::CanGetNeighbors ( void  ) const

inline

Check if it is safe to call GetNeighbors method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 584 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetNeighbors().

Referenced by CCdd_tree_Base::GetNeighbors().

CanGetNelements()

bool CTriangle_Base::CanGetNelements ( void  ) const

inline

Check if it is safe to call GetNelements method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 246 of file Triangle_.hpp.

References CTriangle_Base::IsSetNelements().

Referenced by CTriangle_Base::GetNelements().

CanGetNote()

bool CNode_annotation_Base::CanGetNote ( void  ) const

inline

Check if it is safe to call GetNote method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 253 of file Node_annotation_.hpp.

References CNode_annotation_Base::IsSetNote().

Referenced by CNode_annotation_Base::GetNote().

CanGetNrows()

bool CMatrix_Base::CanGetNrows ( void  ) const

inline

Check if it is safe to call GetNrows method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 364 of file Matrix_.hpp.

References CMatrix_Base::IsSetNrows().

Referenced by CMatrix_Base::GetNrows().

CanGetNTerminalExt()

bool CAlgorithm_type_Base::CanGetNTerminalExt ( void  ) const

inline

Check if it is safe to call GetNTerminalExt method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 862 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetNTerminalExt().

Referenced by CAlgorithm_type_Base::GetNTerminalExt().

CanGetOptional_nodes()

bool CCdd_pref_nodes_Base::CanGetOptional_nodes ( void  ) const

inline

Check if it is safe to call GetOptional_nodes method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 336 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::IsSetOptional_nodes().

Referenced by CPriorityTaxNodes::BuildMap(), and CCdd_pref_nodes_Base::GetOptional_nodes().

CanGetParent() [1/2]

bool CCdd_Base::CanGetParent ( void  ) const

inline

Check if it is safe to call GetParent method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1388 of file Cdd_.hpp.

References CCdd_Base::IsSetParent().

Referenced by CCdd_Base::GetParent().

CanGetParent() [2/2]

bool CCdd_tree_Base::CanGetParent ( void  ) const

inline

Check if it is safe to call GetParent method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 521 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetParent().

Referenced by CCdd_tree_Base::GetParent().

CanGetParent_tax_id()

bool CCdd_org_ref_Base::CanGetParent_tax_id ( void  ) const

inline

Check if it is safe to call GetParent_tax_id method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 373 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::IsSetParent_tax_id().

Referenced by CCdd_org_ref_Base::GetParent_tax_id().

CanGetParent_type()

bool CDomain_parent_Base::CanGetParent_type ( void  ) const

inline

Check if it is safe to call GetParent_type method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 275 of file Domain_parent_.hpp.

References CDomain_parent_Base::IsSetParent_type().

Referenced by CDomain_parent_Base::GetParent_type().

CanGetParentid()

bool CDomain_parent_Base::CanGetParentid ( void  ) const

inline

Check if it is safe to call GetParentid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 322 of file Domain_parent_.hpp.

CanGetPending()

bool CCdd_Base::CanGetPending ( void  ) const

inline

Check if it is safe to call GetPending method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1472 of file Cdd_.hpp.

CanGetPosfreq()

bool CCdd_Base::CanGetPosfreq ( void  ) const

inline

Check if it is safe to call GetPosfreq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1325 of file Cdd_.hpp.

References CCdd_Base::IsSetPosfreq().

Referenced by CCdd_Base::GetPosfreq().

CanGetPreferred_nodes()

bool CCdd_pref_nodes_Base::CanGetPreferred_nodes ( void  ) const

inline

Check if it is safe to call GetPreferred_nodes method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 285 of file Cdd_pref_nodes_.hpp.

Referenced by CPriorityTaxNodes::BuildMap().

CanGetPresentInChildCD()

bool CNode_annotation_Base::CanGetPresentInChildCD ( void  ) const

inline

Check if it is safe to call GetPresentInChildCD method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 206 of file Node_annotation_.hpp.

References CNode_annotation_Base::IsSetPresentInChildCD().

Referenced by CNode_annotation_Base::GetPresentInChildCD().

CanGetProfile_range()

bool CCdd_Base::CanGetProfile_range ( void  ) const

inline

Check if it is safe to call GetProfile_range method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1283 of file Cdd_.hpp.

References CCdd_Base::IsSetProfile_range().

Referenced by CCdd_Base::GetProfile_range().

CanGetProject_id()

bool CCdd_Project_Base::CanGetProject_id ( void  ) const

inline

Check if it is safe to call GetProject_id method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 748 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetProject_id().

Referenced by CCdd_Project_Base::GetProject_id().

CanGetRank()

bool CCdd_org_ref_Base::CanGetRank ( void  ) const

inline

Check if it is safe to call GetRank method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 420 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::IsSetRank().

Referenced by CCdd_org_ref_Base::GetRank().

CanGetRect()

bool CCdd_Viewer_Base::CanGetRect ( void  ) const

inline

Check if it is safe to call GetRect method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 311 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::IsSetRect().

Referenced by CCdd_Viewer_Base::GetRect().

CanGetReference()

bool CCdd_org_ref_Base::CanGetReference ( void  ) const

inline

Check if it is safe to call GetReference method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 293 of file Cdd_org_ref_.hpp.

Referenced by CPriorityTaxNodes::getTaxId(), and CPriorityTaxNodes::getTaxName().

CanGetRejects()

bool CCdd_Base::CanGetRejects ( void  ) const

inline

Check if it is safe to call GetRejects method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1497 of file Cdd_.hpp.

CanGetRelease()

bool CGlobal_id_Base::CanGetRelease ( void  ) const

inline

Check if it is safe to call GetRelease method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 347 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetRelease().

Referenced by CGlobal_id_Base::GetRelease().

CanGetRids()

bool CCdd_Project_Base::CanGetRids ( void  ) const

inline

Check if it is safe to call GetRids method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 681 of file Cdd_Project_.hpp.

CanGetRoot()

bool CSequence_tree_Base::CanGetRoot ( void  ) const

inline

Check if it is safe to call GetRoot method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 421 of file Sequence_tree_.hpp.

CanGetRow_labels()

bool CMatrix_Base::CanGetRow_labels ( void  ) const

inline

Check if it is safe to call GetRow_labels method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 411 of file Matrix_.hpp.

CanGetRowId()

bool CSeqTree_node_Base::C_Children::C_Footprint::CanGetRowId ( void  ) const

inline

Check if it is safe to call GetRowId method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 632 of file SeqTree_node_.hpp.

CanGetScale_factor()

bool CMatrix_Base::CanGetScale_factor ( void  ) const

inline

Check if it is safe to call GetScale_factor method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 436 of file Matrix_.hpp.

References CMatrix_Base::IsSetScale_factor().

Referenced by CMatrix_Base::GetScale_factor().

CanGetScore_Matrix()

bool CAlgorithm_type_Base::CanGetScore_Matrix ( void  ) const

inline

Check if it is safe to call GetScore_Matrix method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 674 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetScore_Matrix().

Referenced by CAlgorithm_type_Base::GetScore_Matrix().

CanGetScoremat()

bool CCdd_Base::CanGetScoremat ( void  ) const

inline

Check if it is safe to call GetScoremat method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1346 of file Cdd_.hpp.

References CCdd_Base::IsSetScoremat().

Referenced by CCdd_Base::GetScoremat().

CanGetScoreparams()

bool CCdd_Base::CanGetScoreparams ( void  ) const

inline

Check if it is safe to call GetScoreparams method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1635 of file Cdd_.hpp.

References CCdd_Base::IsSetScoreparams().

Referenced by CCdd_Base::GetScoreparams().

CanGetScores()

bool CTriangle_Base::CanGetScores ( void  ) const

inline

Check if it is safe to call GetScores method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 293 of file Triangle_.hpp.

References CTriangle_Base::IsSetScores().

Referenced by CTriangle_Base::GetScores().

CanGetScoring_Scheme()

bool CAlgorithm_type_Base::CanGetScoring_Scheme ( void  ) const

inline

Check if it is safe to call GetScoring_Scheme method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 580 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetScoring_Scheme().

Referenced by CAlgorithm_type_Base::GetScoring_Scheme().

CanGetScripts()

bool CCdd_Project_Base::CanGetScripts ( void  ) const

inline

Check if it is safe to call GetScripts method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 635 of file Cdd_Project_.hpp.

CanGetSeqannot() [1/3]

bool CCdd_Base::CanGetSeqannot ( void  ) const

inline

Check if it is safe to call GetSeqannot method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1216 of file Cdd_.hpp.

CanGetSeqannot() [2/3]

bool CDomain_parent_Base::CanGetSeqannot ( void  ) const

inline

Check if it is safe to call GetSeqannot method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 352 of file Domain_parent_.hpp.

References CDomain_parent_Base::IsSetSeqannot().

Referenced by CDomain_parent_Base::GetSeqannot().

CanGetSeqannot() [3/3]

bool CUpdate_align_Base::CanGetSeqannot ( void  ) const

inline

Check if it is safe to call GetSeqannot method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 284 of file Update_align_.hpp.

References CUpdate_align_Base::IsSetSeqannot().

Referenced by CUpdate_align_Base::GetSeqannot().

CanGetSeqRange()

bool CSeqTree_node_Base::C_Children::C_Footprint::CanGetSeqRange ( void  ) const

inline

Check if it is safe to call GetSeqRange method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 602 of file SeqTree_node_.hpp.

CanGetSeqtree()

bool CCdd_Base::CanGetSeqtree ( void  ) const

inline

Check if it is safe to call GetSeqtree method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1656 of file Cdd_.hpp.

References CCdd_Base::IsSetSeqtree().

Referenced by CCdd_Base::GetSeqtree().

CanGetSequences()

bool CCdd_Base::CanGetSequences ( void  ) const

inline

Check if it is safe to call GetSequences method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1262 of file Cdd_.hpp.

References CCdd_Base::IsSetSequences().

Referenced by CCdd_Base::GetSequences().

CanGetSiblings() [1/2]

bool CCdd_Base::CanGetSiblings ( void  ) const

inline

Check if it is safe to call GetSiblings method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1430 of file Cdd_.hpp.

References CCdd_Base::IsSetSiblings().

Referenced by CCdd_Base::GetSiblings().

CanGetSiblings() [2/2]

bool CCdd_tree_Base::CanGetSiblings ( void  ) const

inline

Check if it is safe to call GetSiblings method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 563 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetSiblings().

Referenced by CCdd_tree_Base::GetSiblings().

CanGetStyle_dictionary()

bool CCdd_Base::CanGetStyle_dictionary ( void  ) const

inline

Check if it is safe to call GetStyle_dictionary method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1568 of file Cdd_.hpp.

References CCdd_Base::IsSetStyle_dictionary().

Referenced by CCdd_Base::GetStyle_dictionary().

CanGetSubelementid()

bool CCdd_book_ref_Base::CanGetSubelementid ( void  ) const

inline

Check if it is safe to call GetSubelementid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 530 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetSubelementid().

Referenced by CCdd_book_ref_Base::GetSubelementid().

CanGetTextelement()

bool CCdd_book_ref_Base::CanGetTextelement ( void  ) const

inline

Check if it is safe to call GetTextelement method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 436 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetTextelement().

Referenced by CCdd_book_ref_Base::GetTextelement().

CanGetTop()

bool CCdd_Viewer_Rect_Base::CanGetTop ( void  ) const

inline

Check if it is safe to call GetTop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 288 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetTop().

Referenced by CCdd_Viewer_Rect_Base::GetTop().

CanGetTree_scope()

bool CAlgorithm_type_Base::CanGetTree_scope ( void  ) const

inline

Check if it is safe to call GetTree_scope method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 956 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetTree_scope().

Referenced by CAlgorithm_type_Base::GetTree_scope().

CanGetTrunc_master()

bool CCdd_Base::CanGetTrunc_master ( void  ) const

inline

Check if it is safe to call GetTrunc_master method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1304 of file Cdd_.hpp.

References CCdd_Base::IsSetTrunc_master().

Referenced by CCdd_Base::GetTrunc_master().

CanGetType() [1/3]

bool CAlign_annot_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 525 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetType().

Referenced by CAlign_annot_Base::GetType().

CanGetType() [2/3]

bool CCdd_Script_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 258 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetType().

Referenced by CCdd_Script_Base::GetType().

CanGetType() [3/3]

bool CUpdate_align_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 305 of file Update_align_.hpp.

References CUpdate_align_Base::IsSetType().

Referenced by CUpdate_align_Base::GetType().

CanGetUpdate_date()

bool CCdd_Project_Base::CanGetUpdate_date ( void  ) const

inline

Check if it is safe to call GetUpdate_date method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 727 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetUpdate_date().

Referenced by CCdd_Project_Base::GetUpdate_date().

CanGetUser_annotations()

bool CCdd_Base::CanGetUser_annotations ( void  ) const

inline

Check if it is safe to call GetUser_annotations method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1589 of file Cdd_.hpp.

References CCdd_Base::IsSetUser_annotations().

Referenced by CCdd_Base::GetUser_annotations().

CanGetVersion()

bool CGlobal_id_Base::CanGetVersion ( void  ) const

inline

Check if it is safe to call GetVersion method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 394 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetVersion().

Referenced by CGlobal_id_Base::GetVersion().

CanGetViewers()

bool CCdd_Project_Base::CanGetViewers ( void  ) const

inline

Check if it is safe to call GetViewers method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 563 of file Cdd_Project_.hpp.

CanGetWidth()

bool CCdd_Viewer_Rect_Base::CanGetWidth ( void  ) const

inline

Check if it is safe to call GetWidth method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 382 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetWidth().

Referenced by CCdd_Viewer_Rect_Base::GetWidth().

CCdd_Base() [1/2]

CCdd_Base::CCdd_Base ( const CCdd_Base &  )

private

CCdd_Base() [2/2]

END_CLASS_INFO CCdd_Base::CCdd_Base

(

void

)

Definition at line 470 of file Cdd_.cpp.

References CObject::IsAllocatedInPool(), CCdd_Base::m_set_State, and CCdd_Base::ResetId().

CCdd_book_ref() [1/2]

CCdd_book_ref::CCdd_book_ref ( const CCdd_book_ref &  value )

private

CCdd_book_ref() [2/2]

CCdd_book_ref::CCdd_book_ref ( void  )

inline

Definition at line 86 of file Cdd_book_ref.hpp.

CCdd_book_ref_Base() [1/2]

CCdd_book_ref_Base::CCdd_book_ref_Base ( const CCdd_book_ref_Base &  )

private

CCdd_book_ref_Base() [2/2]

END_CLASS_INFO CCdd_book_ref_Base::CCdd_book_ref_Base

(

void

)

Definition at line 111 of file Cdd_book_ref_.cpp.

References CCdd_book_ref_Base::m_set_State.

CCdd_descr() [1/2]

CCdd_descr::CCdd_descr ( const CCdd_descr &  value )

private

CCdd_descr() [2/2]

CCdd_descr::CCdd_descr ( void  )

inline

Definition at line 86 of file Cdd_descr.hpp.

CCdd_descr_Base() [1/2]

CCdd_descr_Base::CCdd_descr_Base ( const CCdd_descr_Base &  )

private

CCdd_descr_Base() [2/2]

END_CHOICE_INFO CCdd_descr_Base::CCdd_descr_Base

(

void

)

Definition at line 482 of file Cdd_descr_.cpp.

CCdd_descr_set() [1/2]

CCdd_descr_set::CCdd_descr_set ( const CCdd_descr_set &  value )

private

CCdd_descr_set() [2/2]

CCdd_descr_set::CCdd_descr_set ( void  )

inline

Definition at line 86 of file Cdd_descr_set.hpp.

CCdd_descr_set_Base() [1/2]

CCdd_descr_set_Base::CCdd_descr_set_Base ( const CCdd_descr_set_Base &  )

private

CCdd_descr_set_Base() [2/2]

END_CLASS_INFO CCdd_descr_set_Base::CCdd_descr_set_Base

(

void

)

Definition at line 68 of file Cdd_descr_set_.cpp.

References CCdd_descr_set_Base::m_set_State.

CCdd_id() [1/2]

CCdd_id::CCdd_id ( const CCdd_id &  value )

private

CCdd_id() [2/2]

CCdd_id::CCdd_id ( void  )

inline

Definition at line 86 of file Cdd_id.hpp.

CCdd_id_Base() [1/2]

CCdd_id_Base::CCdd_id_Base ( const CCdd_id_Base &  )

private

CCdd_id_Base() [2/2]

END_CHOICE_INFO CCdd_id_Base::CCdd_id_Base

(

void

)

Definition at line 136 of file Cdd_id_.cpp.

CCdd_id_set() [1/2]

CCdd_id_set::CCdd_id_set ( const CCdd_id_set &  value )

private

CCdd_id_set() [2/2]

CCdd_id_set::CCdd_id_set ( void  )

inline

Definition at line 86 of file Cdd_id_set.hpp.

CCdd_id_set_Base() [1/2]

CCdd_id_set_Base::CCdd_id_set_Base ( const CCdd_id_set_Base &  )

private

CCdd_id_set_Base() [2/2]

END_CLASS_INFO CCdd_id_set_Base::CCdd_id_set_Base

(

void

)

Definition at line 68 of file Cdd_id_set_.cpp.

References CCdd_id_set_Base::m_set_State.

CCdd_org_ref() [1/2]

CCdd_org_ref::CCdd_org_ref ( const CCdd_org_ref &  value )

private

CCdd_org_ref() [2/2]

CCdd_org_ref::CCdd_org_ref ( void  )

inline

Definition at line 86 of file Cdd_org_ref.hpp.

CCdd_org_ref_Base() [1/2]

CCdd_org_ref_Base::CCdd_org_ref_Base ( const CCdd_org_ref_Base &  )

private

CCdd_org_ref_Base() [2/2]

END_CLASS_INFO CCdd_org_ref_Base::CCdd_org_ref_Base

(

void

)

Definition at line 93 of file Cdd_org_ref_.cpp.

References CObject::IsAllocatedInPool(), CCdd_org_ref_Base::m_set_State, and CCdd_org_ref_Base::ResetReference().

CCdd_org_ref_set() [1/2]

CCdd_org_ref_set::CCdd_org_ref_set ( const CCdd_org_ref_set &  value )

private

CCdd_org_ref_set() [2/2]

CCdd_org_ref_set::CCdd_org_ref_set ( void  )

inline

Definition at line 86 of file Cdd_org_ref_set.hpp.

CCdd_org_ref_set_Base() [1/2]

CCdd_org_ref_set_Base::CCdd_org_ref_set_Base ( const CCdd_org_ref_set_Base &  )

private

CCdd_org_ref_set_Base() [2/2]

END_CLASS_INFO CCdd_org_ref_set_Base::CCdd_org_ref_set_Base

(

void

)

Definition at line 68 of file Cdd_org_ref_set_.cpp.

References CCdd_org_ref_set_Base::m_set_State.

CCdd_pref_node_descr() [1/2]

CCdd_pref_node_descr::CCdd_pref_node_descr ( const CCdd_pref_node_descr &  value )

private

CCdd_pref_node_descr() [2/2]

CCdd_pref_node_descr::CCdd_pref_node_descr ( void  )

inline

Definition at line 86 of file Cdd_pref_node_descr.hpp.

CCdd_pref_node_descr_Base() [1/2]

CCdd_pref_node_descr_Base::CCdd_pref_node_descr_Base ( const CCdd_pref_node_descr_Base &  )

private

CCdd_pref_node_descr_Base() [2/2]

END_CHOICE_INFO CCdd_pref_node_descr_Base::CCdd_pref_node_descr_Base

(

void

)

Definition at line 145 of file Cdd_pref_node_descr_.cpp.

CCdd_pref_node_descr_set() [1/2]

CCdd_pref_node_descr_set::CCdd_pref_node_descr_set ( const CCdd_pref_node_descr_set &  value )

private

CCdd_pref_node_descr_set() [2/2]

CCdd_pref_node_descr_set::CCdd_pref_node_descr_set ( void  )

inline

Definition at line 86 of file Cdd_pref_node_descr_set.hpp.

CCdd_pref_node_descr_set_Base() [1/2]

CCdd_pref_node_descr_set_Base::CCdd_pref_node_descr_set_Base ( const CCdd_pref_node_descr_set_Base &  )

private

CCdd_pref_node_descr_set_Base() [2/2]

END_CLASS_INFO CCdd_pref_node_descr_set_Base::CCdd_pref_node_descr_set_Base

(

void

)

Definition at line 68 of file Cdd_pref_node_descr_set_.cpp.

References CCdd_pref_node_descr_set_Base::m_set_State.

CCdd_pref_nodes() [1/2]

CCdd_pref_nodes::CCdd_pref_nodes ( const CCdd_pref_nodes &  value )

private

CCdd_pref_nodes() [2/2]

CCdd_pref_nodes::CCdd_pref_nodes ( void  )

inline

Definition at line 86 of file Cdd_pref_nodes.hpp.

CCdd_pref_nodes_Base() [1/2]

CCdd_pref_nodes_Base::CCdd_pref_nodes_Base ( const CCdd_pref_nodes_Base &  )

private

CCdd_pref_nodes_Base() [2/2]

END_CLASS_INFO CCdd_pref_nodes_Base::CCdd_pref_nodes_Base

(

void

)

Definition at line 139 of file Cdd_pref_nodes_.cpp.

References CObject::IsAllocatedInPool(), CCdd_pref_nodes_Base::m_set_State, and CCdd_pref_nodes_Base::ResetPreferred_nodes().

CCdd_Project() [1/2]

CCdd_Project::CCdd_Project ( const CCdd_Project &  value )

private

CCdd_Project() [2/2]

CCdd_Project::CCdd_Project ( void  )

inline

Definition at line 86 of file Cdd_Project.hpp.

CCdd_Project_Base() [1/2]

CCdd_Project_Base::CCdd_Project_Base ( const CCdd_Project_Base &  )

private

CCdd_Project_Base() [2/2]

END_CLASS_INFO CCdd_Project_Base::CCdd_Project_Base

(

void

)

Definition at line 176 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_set_State.

CCdd_repeat() [1/2]

CCdd_repeat::CCdd_repeat ( const CCdd_repeat &  value )

private

CCdd_repeat() [2/2]

CCdd_repeat::CCdd_repeat ( void  )

inline

Definition at line 86 of file Cdd_repeat.hpp.

CCdd_repeat_Base() [1/2]

CCdd_repeat_Base::CCdd_repeat_Base ( const CCdd_repeat_Base &  )

private

CCdd_repeat_Base() [2/2]

END_CLASS_INFO CCdd_repeat_Base::CCdd_repeat_Base

(

void

)

Definition at line 88 of file Cdd_repeat_.cpp.

References CCdd_repeat_Base::m_set_State.

CCdd_Script() [1/2]

CCdd_Script::CCdd_Script ( const CCdd_Script &  value )

private

CCdd_Script() [2/2]

CCdd_Script::CCdd_Script ( void  )

inline

Definition at line 86 of file Cdd_Script.hpp.

CCdd_Script_Base() [1/2]

CCdd_Script_Base::CCdd_Script_Base ( const CCdd_Script_Base &  )

private

CCdd_Script_Base() [2/2]

END_CLASS_INFO CCdd_Script_Base::CCdd_Script_Base

(

void

)

Definition at line 93 of file Cdd_Script_.cpp.

References CCdd_Script_Base::m_set_State.

CCdd_set() [1/2]

CCdd_set::CCdd_set ( const CCdd_set &  value )

private

CCdd_set() [2/2]

CCdd_set::CCdd_set ( void  )

inline

Definition at line 86 of file Cdd_set.hpp.

CCdd_set_Base() [1/2]

CCdd_set_Base::CCdd_set_Base ( const CCdd_set_Base &  )

private

CCdd_set_Base() [2/2]

END_CLASS_INFO CCdd_set_Base::CCdd_set_Base

(

void

)

Definition at line 68 of file Cdd_set_.cpp.

References CCdd_set_Base::m_set_State.

CCdd_tree() [1/2]

CCdd_tree::CCdd_tree ( const CCdd_tree &  value )

private

CCdd_tree() [2/2]

CCdd_tree::CCdd_tree ( void  )

inline

Definition at line 86 of file Cdd_tree.hpp.

CCdd_tree_Base() [1/2]

CCdd_tree_Base::CCdd_tree_Base ( const CCdd_tree_Base &  )

private

CCdd_tree_Base() [2/2]

END_CLASS_INFO CCdd_tree_Base::CCdd_tree_Base

(

void

)

Definition at line 186 of file Cdd_tree_.cpp.

References CObject::IsAllocatedInPool(), CCdd_tree_Base::m_set_State, and CCdd_tree_Base::ResetId().

CCdd_tree_set() [1/2]

CCdd_tree_set::CCdd_tree_set ( const CCdd_tree_set &  value )

private

CCdd_tree_set() [2/2]

CCdd_tree_set::CCdd_tree_set ( void  )

inline

Definition at line 86 of file Cdd_tree_set.hpp.

CCdd_tree_set_Base() [1/2]

CCdd_tree_set_Base::CCdd_tree_set_Base ( const CCdd_tree_set_Base &  )

private

CCdd_tree_set_Base() [2/2]

END_CLASS_INFO CCdd_tree_set_Base::CCdd_tree_set_Base

(

void

)

Definition at line 68 of file Cdd_tree_set_.cpp.

References CCdd_tree_set_Base::m_set_State.

CCdd_Viewer() [1/2]

CCdd_Viewer::CCdd_Viewer ( const CCdd_Viewer &  value )

private

CCdd_Viewer() [2/2]

CCdd_Viewer::CCdd_Viewer ( void  )

inline

Definition at line 86 of file Cdd_Viewer.hpp.

CCdd_Viewer_Base() [1/2]

CCdd_Viewer_Base::CCdd_Viewer_Base ( const CCdd_Viewer_Base &  )

private

CCdd_Viewer_Base() [2/2]

END_CLASS_INFO CCdd_Viewer_Base::CCdd_Viewer_Base

(

void

)

Definition at line 113 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::m_set_State.

CCdd_Viewer_Rect() [1/2]

CCdd_Viewer_Rect::CCdd_Viewer_Rect ( const CCdd_Viewer_Rect &  value )

private

CCdd_Viewer_Rect() [2/2]

CCdd_Viewer_Rect::CCdd_Viewer_Rect ( void  )

inline

Definition at line 86 of file Cdd_Viewer_Rect.hpp.

CCdd_Viewer_Rect_Base() [1/2]

CCdd_Viewer_Rect_Base::CCdd_Viewer_Rect_Base ( const CCdd_Viewer_Rect_Base &  )

private

CCdd_Viewer_Rect_Base() [2/2]

END_CLASS_INFO CCdd_Viewer_Rect_Base::CCdd_Viewer_Rect_Base

(

void

)

Definition at line 72 of file Cdd_Viewer_Rect_.cpp.

References CCdd_Viewer_Rect_Base::m_set_State.

CDomain_parent() [1/2]

CDomain_parent::CDomain_parent ( const CDomain_parent &  value )

private

CDomain_parent() [2/2]

CDomain_parent::CDomain_parent ( void  )

inline

Definition at line 86 of file Domain_parent.hpp.

CDomain_parent_Base() [1/2]

CDomain_parent_Base::CDomain_parent_Base ( const CDomain_parent_Base &  )

private

CDomain_parent_Base() [2/2]

END_CLASS_INFO CDomain_parent_Base::CDomain_parent_Base

(

void

)

Definition at line 115 of file Domain_parent_.cpp.

References CObject::IsAllocatedInPool(), CDomain_parent_Base::m_set_State, and CDomain_parent_Base::ResetParentid().

CFeature_evidence() [1/2]

CFeature_evidence::CFeature_evidence ( const CFeature_evidence &  value )

private

CFeature_evidence() [2/2]

CFeature_evidence::CFeature_evidence ( void  )

inline

Definition at line 86 of file Feature_evidence.hpp.

CFeature_evidence_Base() [1/2]

CFeature_evidence_Base::CFeature_evidence_Base ( const CFeature_evidence_Base &  )

private

CFeature_evidence_Base() [2/2]

END_CHOICE_INFO CFeature_evidence_Base::CFeature_evidence_Base

(

void

)

Definition at line 232 of file Feature_evidence_.cpp.

CGlobal_id() [1/2]

CGlobal_id::CGlobal_id ( const CGlobal_id &  value )

private

CGlobal_id() [2/2]

CGlobal_id::CGlobal_id ( void  )

inline

Definition at line 86 of file Global_id.hpp.

CGlobal_id_Base() [1/2]

CGlobal_id_Base::CGlobal_id_Base ( const CGlobal_id_Base &  )

private

CGlobal_id_Base() [2/2]

END_CLASS_INFO CGlobal_id_Base::CGlobal_id_Base

(

void

)

Definition at line 90 of file Global_id_.cpp.

References CGlobal_id_Base::m_set_State.

CheckSelected() [1/6]

void CCdd_descr_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 750 of file Cdd_descr_.hpp.

References CCdd_descr_Base::m_choice, and CCdd_descr_Base::ThrowInvalidSelection().

Referenced by CCdd_descr_Base::GetAttribution(), CCdd_descr_Base::GetBook_ref(), CCdd_descr_Base::GetCategory(), CCdd_descr_Base::GetComment(), CCdd_descr_Base::GetCreate_date(), CCdd_descr_Base::GetCuration_status(), CCdd_descr_Base::GetOld_root(), CCdd_descr_Base::GetOthername(), CCdd_descr_Base::GetReadonly_status(), CCdd_descr_Base::GetReference(), CCdd_descr_Base::GetRepeats(), CCdd_descr_Base::GetScrapbook(), CCdd_descr_Base::GetSource(), CCdd_descr_Base::GetSource_id(), CCdd_descr_Base::GetStatus(), CCdd_descr_Base::GetTax_source(), CCdd_descr_Base::GetTitle(), and CCdd_descr_Base::GetUpdate_date().

CheckSelected() [2/6]

void CCdd_id_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 237 of file Cdd_id_.hpp.

References CCdd_id_Base::m_choice, and CCdd_id_Base::ThrowInvalidSelection().

Referenced by CCdd_id_Base::GetGid(), and CCdd_id_Base::GetUid().

CheckSelected() [3/6]

void CCdd_pref_node_descr_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 241 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::m_choice, and CCdd_pref_node_descr_Base::ThrowInvalidSelection().

Referenced by CCdd_pref_node_descr_Base::GetCreate_date(), and CCdd_pref_node_descr_Base::GetDescription().

CheckSelected() [4/6]

void CFeature_evidence_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 328 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::m_choice, and CFeature_evidence_Base::ThrowInvalidSelection().

Referenced by CFeature_evidence_Base::GetBook_ref(), CFeature_evidence_Base::GetBsannot(), CFeature_evidence_Base::GetComment(), CFeature_evidence_Base::GetReference(), and CFeature_evidence_Base::GetSeqfeat().

CheckSelected() [5/6]

void CSeqTree_node_Base::C_Children::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 679 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::m_choice, and CSeqTree_node_Base::C_Children::ThrowInvalidSelection().

Referenced by CSeqTree_node_Base::C_Children::GetChildren(), and CSeqTree_node_Base::C_Children::GetFootprint().

CheckSelected() [6/6]

void CUpdate_comment_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 330 of file Update_comment_.hpp.

References CUpdate_comment_Base::m_choice, and CUpdate_comment_Base::ThrowInvalidSelection().

Referenced by CUpdate_comment_Base::GetAddthis(), CUpdate_comment_Base::GetComment(), CUpdate_comment_Base::GetReference(), CUpdate_comment_Base::GetReject_loc(), and CUpdate_comment_Base::GetReplaces().

CMatrix() [1/2]

CMatrix::CMatrix ( const CMatrix &  value )

private

CMatrix() [2/2]

CMatrix::CMatrix ( void  )

inline

Definition at line 86 of file Matrix.hpp.

CMatrix_Base() [1/2]

CMatrix_Base::CMatrix_Base ( const CMatrix_Base &  )

private

CMatrix_Base() [2/2]

END_CLASS_INFO CMatrix_Base::CMatrix_Base

(

void

)

Definition at line 86 of file Matrix_.cpp.

References CMatrix_Base::m_set_State.

CNode_annotation() [1/2]

CNode_annotation::CNode_annotation ( const CNode_annotation &  value )

private

CNode_annotation() [2/2]

CNode_annotation::CNode_annotation ( void  )

inline

Definition at line 86 of file Node_annotation.hpp.

CNode_annotation_Base() [1/2]

CNode_annotation_Base::CNode_annotation_Base ( const CNode_annotation_Base &  )

private

CNode_annotation_Base() [2/2]

END_CLASS_INFO CNode_annotation_Base::CNode_annotation_Base

(

void

)

Definition at line 80 of file Node_annotation_.cpp.

References CNode_annotation_Base::m_set_State.

CReject_id() [1/2]

CReject_id::CReject_id ( const CReject_id &  value )

private

CReject_id() [2/2]

CReject_id::CReject_id ( void  )

inline

Definition at line 86 of file Reject_id.hpp.

CReject_id_Base() [1/2]

CReject_id_Base::CReject_id_Base ( const CReject_id_Base &  )

private

CReject_id_Base() [2/2]

END_CLASS_INFO CReject_id_Base::CReject_id_Base

(

void

)

Definition at line 82 of file Reject_id_.cpp.

References CReject_id_Base::m_set_State.

CSeqTree_node() [1/2]

CSeqTree_node::CSeqTree_node ( const CSeqTree_node &  value )

private

CSeqTree_node() [2/2]

CSeqTree_node::CSeqTree_node ( void  )

inline

Definition at line 86 of file SeqTree_node.hpp.

CSeqTree_node_Base() [1/2]

CSeqTree_node_Base::CSeqTree_node_Base ( const CSeqTree_node_Base &  )

private

CSeqTree_node_Base() [2/2]

END_CLASS_INFO CSeqTree_node_Base::CSeqTree_node_Base

(

void

)

Definition at line 262 of file SeqTree_node_.cpp.

References CObject::IsAllocatedInPool(), CSeqTree_node_Base::m_set_State, and CSeqTree_node_Base::ResetChildren().

CSequence_tree() [1/2]

CSequence_tree::CSequence_tree ( const CSequence_tree &  value )

private

CSequence_tree() [2/2]

CSequence_tree::CSequence_tree ( void  )

inline

Definition at line 86 of file Sequence_tree.hpp.

CSequence_tree_Base() [1/2]

CSequence_tree_Base::CSequence_tree_Base ( const CSequence_tree_Base &  )

private

CSequence_tree_Base() [2/2]

END_CLASS_INFO CSequence_tree_Base::CSequence_tree_Base

(

void

)

Definition at line 108 of file Sequence_tree_.cpp.

References CObject::IsAllocatedInPool(), CSequence_tree_Base::m_set_State, CSequence_tree_Base::ResetAlgorithm(), and CSequence_tree_Base::ResetRoot().

CTriangle() [1/2]

CTriangle::CTriangle ( const CTriangle &  value )

private

CTriangle() [2/2]

CTriangle::CTriangle ( void  )

inline

Definition at line 86 of file Triangle.hpp.

CTriangle_Base() [1/2]

CTriangle_Base::CTriangle_Base ( const CTriangle_Base &  )

private

CTriangle_Base() [2/2]

END_CLASS_INFO CTriangle_Base::CTriangle_Base

(

void

)

Definition at line 94 of file Triangle_.cpp.

References CTriangle_Base::m_set_State.

CUpdate_align() [1/2]

CUpdate_align::CUpdate_align ( const CUpdate_align &  value )

private

CUpdate_align() [2/2]

CUpdate_align::CUpdate_align ( void  )

inline

Definition at line 86 of file Update_align.hpp.

CUpdate_align_Base() [1/2]

CUpdate_align_Base::CUpdate_align_Base ( const CUpdate_align_Base &  )

private

CUpdate_align_Base() [2/2]

END_CLASS_INFO CUpdate_align_Base::CUpdate_align_Base

(

void

)

Definition at line 108 of file Update_align_.cpp.

References CUpdate_align_Base::m_set_State.

CUpdate_comment() [1/2]

CUpdate_comment::CUpdate_comment ( const CUpdate_comment &  value )

private

CUpdate_comment() [2/2]

CUpdate_comment::CUpdate_comment ( void  )

inline

Definition at line 86 of file Update_comment.hpp.

CUpdate_comment_Base() [1/2]

CUpdate_comment_Base::CUpdate_comment_Base ( const CUpdate_comment_Base &  )

private

CUpdate_comment_Base() [2/2]

END_CHOICE_INFO CUpdate_comment_Base::CUpdate_comment_Base

(

void

)

Definition at line 230 of file Update_comment_.cpp.

DECLARE_INTERNAL_TYPE_INFO() [1/35]

CAlgorithm_type_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [2/35]

CAlign_annot_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [3/35]

CAlign_annot_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [4/35]

CCdd_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [5/35]

CCdd_book_ref_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [6/35]

CCdd_descr_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [7/35]

CCdd_descr_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [8/35]

CCdd_id_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [9/35]

CCdd_id_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [10/35]

CCdd_org_ref_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [11/35]

CCdd_org_ref_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [12/35]

CCdd_pref_node_descr_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [13/35]

CCdd_pref_node_descr_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [14/35]

CCdd_pref_nodes_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [15/35]

CCdd_Project_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [16/35]

CCdd_repeat_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [17/35]

CCdd_Script_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [18/35]

CCdd_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [19/35]

CCdd_tree_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [20/35]

CCdd_tree_set_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [21/35]

CCdd_Viewer_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [22/35]

CCdd_Viewer_Rect_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [23/35]

CDomain_parent_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [24/35]

CFeature_evidence_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [25/35]

CGlobal_id_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [26/35]

CMatrix_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [27/35]

CNode_annotation_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [28/35]

CReject_id_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [29/35]

CSeqTree_node_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [30/35]

CSeqTree_node_Base::C_Children::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [31/35]

CSeqTree_node_Base::C_Children::C_Footprint::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [32/35]

CSequence_tree_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [33/35]

CTriangle_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [34/35]

CUpdate_align_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [35/35]

CUpdate_comment_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DoSelect() [1/6]

void CCdd_descr_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 137 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Attribution, CCdd_descr_Base::e_Book_ref, CCdd_descr_Base::e_Category, CCdd_descr_Base::e_Comment, CCdd_descr_Base::e_Create_date, CCdd_descr_Base::e_Curation_status, CCdd_descr_Base::e_Old_root, CCdd_descr_Base::e_Othername, CCdd_descr_Base::e_Readonly_status, CCdd_descr_Base::e_Reference, CCdd_descr_Base::e_Repeats, CCdd_descr_Base::e_Scrapbook, CCdd_descr_Base::e_Source, CCdd_descr_Base::e_Source_id, CCdd_descr_Base::e_Status, CCdd_descr_Base::e_Tax_source, CCdd_descr_Base::e_Title, CCdd_descr_Base::e_Update_date, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_Curation_status, CCdd_descr_Base::m_object, CCdd_descr_Base::m_Readonly_status, CCdd_descr_Base::m_Scrapbook, CCdd_descr_Base::m_Status, and CCdd_descr_Base::m_string.

DoSelect() [2/6]

void CCdd_id_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 69 of file Cdd_id_.cpp.

References CObject::AddReference(), CCdd_id_Base::e_Gid, CCdd_id_Base::e_Uid, CCdd_id_Base::m_choice, CCdd_id_Base::m_object, and CCdd_id_Base::m_Uid.

DoSelect() [3/6]

void CCdd_pref_node_descr_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 72 of file Cdd_pref_node_descr_.cpp.

References CObject::AddReference(), CCdd_pref_node_descr_Base::e_Create_date, CCdd_pref_node_descr_Base::e_Description, CCdd_pref_node_descr_Base::m_choice, CCdd_pref_node_descr_Base::m_object, and CCdd_pref_node_descr_Base::m_string.

DoSelect() [4/6]

void CFeature_evidence_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 78 of file Feature_evidence_.cpp.

References CObject::AddReference(), CFeature_evidence_Base::e_Book_ref, CFeature_evidence_Base::e_Bsannot, CFeature_evidence_Base::e_Comment, CFeature_evidence_Base::e_Reference, CFeature_evidence_Base::e_Seqfeat, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::m_string.

DoSelect() [5/6]

void CSeqTree_node_Base::C_Children::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 121 of file SeqTree_node_.cpp.

References CObject::AddReference(), CSeqTree_node_Base::C_Children::e_Children, CSeqTree_node_Base::C_Children::e_Footprint, CSeqTree_node_Base::C_Children::m_Children, CSeqTree_node_Base::C_Children::m_choice, and CSeqTree_node_Base::C_Children::m_object.

DoSelect() [6/6]

void CUpdate_comment_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 76 of file Update_comment_.cpp.

References CObject::AddReference(), CUpdate_comment_Base::e_Addthis, CUpdate_comment_Base::e_Comment, CUpdate_comment_Base::e_Reference, CUpdate_comment_Base::e_Reject_loc, CUpdate_comment_Base::e_Replaces, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::m_string.

EClustering_Method()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CAlgorithm_type_Base::EClustering_Method ( void  )

static

Access to EClustering_Method's attributes (values, names) as defined in spec.

EColoring_scope()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CAlgorithm_type_Base::EColoring_scope ( void  )

static

Access to EColoring_scope's attributes (values, names) as defined in spec.

ECtrl()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_Viewer_Base::ECtrl ( void  )

static

Access to ECtrl's attributes (values, names) as defined in spec.

ECuration_status()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_descr_Base::ECuration_status ( void  )

static

Access to ECuration_status's attributes (values, names) as defined in spec.

EParent_type()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CDomain_parent_Base::EParent_type ( void  )

static

Access to EParent_type's attributes (values, names) as defined in spec.

EReadonly_status()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_descr_Base::EReadonly_status ( void  )

static

Access to EReadonly_status's attributes (values, names) as defined in spec.

EScore_Matrix()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CAlgorithm_type_Base::EScore_Matrix ( void  )

static

Access to EScore_Matrix's attributes (values, names) as defined in spec.

EScoring_Scheme()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CAlgorithm_type_Base::EScoring_Scheme ( void  )

static

Access to EScoring_Scheme's attributes (values, names) as defined in spec.

EStatus()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_descr_Base::EStatus ( void  )

static

Access to EStatus's attributes (values, names) as defined in spec.

ETextelement()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_book_ref_Base::ETextelement ( void  )

static

Access to ETextelement's attributes (values, names) as defined in spec.

ETree_scope()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CAlgorithm_type_Base::ETree_scope ( void  )

static

Access to ETree_scope's attributes (values, names) as defined in spec.

EType() [1/2]

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CCdd_Script_Base::EType ( void  )

static

Access to EType's attributes (values, names) as defined in spec.

EType() [2/2]

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CUpdate_align_Base::EType ( void  )

static

Access to EType's attributes (values, names) as defined in spec.

Get() [1/7]

const CAlign_annot_set_Base::Tdata & CAlign_annot_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Align_annot_set_.hpp.

References CAlign_annot_set_Base::m_data.

Referenced by CCdCore::AlignAnnotsValid(), and CDDSplashDialog::CDDSplashDialog().

Get() [2/7]

const CCdd_descr_set_Base::Tdata & CCdd_descr_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_descr_set_.hpp.

References CCdd_descr_set_Base::m_data.

Referenced by CCdCore::AddComment(), CCdCore::AddOthername(), CCdCore::AddPmidReference(), CCdCore::AddTitle(), CDDSplashDialog::CDDSplashDialog(), ASNDataManager::GetCDDDescription(), ASNDataManager::GetCDDNotes(), CCdCore::GetLongDescription(), CCdCore::GetTitle(), CCdCore::GetTitles(), CCdCore::GetUpdateDate(), CDDRefDialog::OnButton(), and ASNDataManager::SetCDDDescription().

Get() [3/7]

const CCdd_id_set_Base::Tdata & CCdd_id_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_id_set_.hpp.

References CCdd_id_set_Base::m_data.

Referenced by CddIdString(), CCdCore::GetAccession(), CCdCore::GetUID(), CCdCore::HasCddId(), and CSeqAnnotFromFasta::MakeSeqAnnotFromFasta().

Get() [4/7]

const CCdd_org_ref_set_Base::Tdata & CCdd_org_ref_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_org_ref_set_.hpp.

References CCdd_org_ref_set_Base::m_data.

Referenced by CPriorityTaxNodes::CddOrgRefSetToTaxIds(), and CPriorityTaxNodes::putIntoMap().

Get() [5/7]

const CCdd_pref_node_descr_set_Base::Tdata & CCdd_pref_node_descr_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_pref_node_descr_set_.hpp.

References CCdd_pref_node_descr_set_Base::m_data.

Get() [6/7]

const CCdd_set_Base::Tdata & CCdd_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_set_.hpp.

References CCdd_set_Base::m_data.

Get() [7/7]

const CCdd_tree_set_Base::Tdata & CCdd_tree_set_Base::Get ( void  ) const

inline

Get the member data.

Returns

Reference to the member data.

Definition at line 164 of file Cdd_tree_set_.hpp.

References CCdd_tree_set_Base::m_data.

GetAccession()

const CGlobal_id_Base::TAccession & CGlobal_id_Base::GetAccession ( void  ) const

inline

Get the Accession member data.

Returns

Reference to the member data.

Definition at line 306 of file Global_id_.hpp.

References CGlobal_id_Base::CanGetAccession(), CGlobal_id_Base::m_Accession, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::GetClassicalParentAccession(), and SameCDAccession().

GetAccessions()

const CCdd_Viewer_Base::TAccessions & CCdd_Viewer_Base::GetAccessions ( void  ) const

inline

Get the Accessions member data.

Returns

Reference to the member data.

Definition at line 338 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_Accessions.

GetActive()

CCdd_org_ref_Base::TActive CCdd_org_ref_Base::GetActive ( void  ) const

inline

Get the Active member data.

Returns

Copy of the member data.

Definition at line 342 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Active.

Referenced by CPriorityTaxNodes::isActive().

GetAddthis()

const CUpdate_comment_Base::TAddthis & CUpdate_comment_Base::GetAddthis

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 125 of file Update_comment_.cpp.

References CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::e_Addthis, and CUpdate_comment_Base::m_object.

GetAlgorithm()

const CSequence_tree_Base::TAlgorithm & CSequence_tree_Base::GetAlgorithm ( void  ) const

inline

Get the Algorithm member data.

Returns

Reference to the member data.

Definition at line 347 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Algorithm, and CSequence_tree_Base::ResetAlgorithm().

Referenced by SeqTreeAPI::loadAndValidateExistingTree(), and SeqTreeAPI::loadExistingTree().

GetAliases()

const CAlign_annot_Base::TAliases & CAlign_annot_Base::GetAliases ( void  ) const

inline

Get the Aliases member data.

Returns

Reference to the member data.

Definition at line 578 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Aliases.

GetAlignannot()

const CCdd_Base::TAlignannot & CCdd_Base::GetAlignannot ( void  ) const

inline

Get the Alignannot member data.

Returns

Reference to the member data.

Definition at line 1553 of file Cdd_.hpp.

References CCdd_Base::CanGetAlignannot(), CCdd_Base::m_Alignannot, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::AlignAnnotsValid().

GetAncestors()

const CCdd_Base::TAncestors & CCdd_Base::GetAncestors ( void  ) const

inline

Get the Ancestors member data.

Returns

Reference to the member data.

Definition at line 1616 of file Cdd_.hpp.

References CCdd_Base::m_Ancestors.

Referenced by CCdCore::GetClassicalParentId(), CCdCore::HasParentType(), and obeysParentTypeConstraints().

GetAnnotation()

const CSeqTree_node_Base::TAnnotation & CSeqTree_node_Base::GetAnnotation ( void  ) const

inline

Get the Annotation member data.

Returns

Reference to the member data.

Definition at line 914 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::CanGetAnnotation(), CSeqTree_node_Base::m_Annotation, and CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAsnizer::fillSeqItem().

GetAttribution()

const CCdd_descr_Base::TAttribution & CCdd_descr_Base::GetAttribution

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 424 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Attribution, and CCdd_descr_Base::m_object.

GetAvglen()

CCdd_repeat_Base::TAvglen CCdd_repeat_Base::GetAvglen ( void  ) const

inline

Get the Avglen member data.

Returns

Copy of the member data.

Definition at line 330 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::CanGetAvglen(), CCdd_repeat_Base::m_Avglen, and CSerialObject::ThrowUnassigned().

GetBook_ref() [1/2]

const CCdd_descr_Base::TBook_ref & CCdd_descr_Base::GetBook_ref

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 402 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Book_ref, and CCdd_descr_Base::m_object.

GetBook_ref() [2/2]

const CFeature_evidence_Base::TBook_ref & CFeature_evidence_Base::GetBook_ref

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 193 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::e_Book_ref, and CFeature_evidence_Base::m_object.

GetBookname()

const CCdd_book_ref_Base::TBookname & CCdd_book_ref_Base::GetBookname ( void  ) const

inline

Get the Bookname member data.

Returns

Reference to the member data.

Definition at line 395 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetBookname(), CCdd_book_ref_Base::m_Bookname, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), CCddBookRefToPortalString(), and CDDBookRefDialog::SetWidgetStates().

GetBsannot()

const CFeature_evidence_Base::TBsannot & CFeature_evidence_Base::GetBsannot

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 149 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::e_Bsannot, and CFeature_evidence_Base::m_object.

Referenced by CDDAnnotateDialog::ShowEvidence().

GetCategory()

const CCdd_descr_Base::TCategory & CCdd_descr_Base::GetCategory ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 799 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Category, and CCdd_descr_Base::m_string.

GetCdAccession()

const CSequence_tree_Base::TCdAccession & CSequence_tree_Base::GetCdAccession ( void  ) const

inline

Get the CdAccession member data.

Returns

Reference to the member data.

Definition at line 300 of file Sequence_tree_.hpp.

References CSequence_tree_Base::CanGetCdAccession(), CSequence_tree_Base::m_CdAccession, and CSerialObject::ThrowUnassigned().

GetCdcolor()

const CCdd_Project_Base::TCdcolor & CCdd_Project_Base::GetCdcolor ( void  ) const

inline

Get the Cdcolor member data.

Returns

Reference to the member data.

Definition at line 544 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Cdcolor.

GetCds()

const CCdd_Project_Base::TCds & CCdd_Project_Base::GetCds ( void  ) const

inline

Get the Cds member data.

Returns

Reference to the member data.

Definition at line 519 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Cds.

GetCelementid()

const CCdd_book_ref_Base::TCelementid & CCdd_book_ref_Base::GetCelementid ( void  ) const

inline

Get the Celementid member data.

Returns

Reference to the member data.

Definition at line 583 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetCelementid(), CCdd_book_ref_Base::m_Celementid, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), CCddBookRefToPortalString(), and CDDBookRefDialog::SetWidgetStates().

GetChildren() [1/4]

const CCdd_Base::TChildren & CCdd_Base::GetChildren ( void  ) const

inline

Get the Children member data.

Returns

Reference to the member data.

Definition at line 1415 of file Cdd_.hpp.

References CCdd_Base::CanGetChildren(), CCdd_Base::m_Children, and CSerialObject::ThrowUnassigned().

GetChildren() [2/4]

const CCdd_tree_Base::TChildren & CCdd_tree_Base::GetChildren ( void  ) const

inline

Get the Children member data.

Returns

Reference to the member data.

Definition at line 548 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetChildren(), CCdd_tree_Base::m_Children, and CSerialObject::ThrowUnassigned().

GetChildren() [3/4]

const CSeqTree_node_Base::C_Children::TChildren & CSeqTree_node_Base::C_Children::GetChildren ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 708 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::CheckSelected(), CSeqTree_node_Base::C_Children::e_Children, and CSeqTree_node_Base::C_Children::m_Children.

GetChildren() [4/4]

const CSeqTree_node_Base::TChildren & CSeqTree_node_Base::GetChildren ( void  ) const

inline

Get the Children member data.

Returns

Reference to the member data.

Definition at line 884 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::m_Children, and CSeqTree_node_Base::ResetChildren().

Referenced by SeqTreeAsnizer::addChildNode(), SeqTreeAsnizer::convertToSeqTree(), and SeqTreeAsnizer::fillSeqItem().

GetClustering_Method()

CAlgorithm_type_Base::TClustering_Method CAlgorithm_type_Base::GetClustering_Method ( void  ) const

inline

Get the Clustering_Method member data.

Returns

Copy of the member data.

Definition at line 640 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetClustering_Method(), CAlgorithm_type_Base::m_Clustering_Method, and CSerialObject::ThrowUnassigned().

GetColoring_scope()

CAlgorithm_type_Base::TColoring_scope CAlgorithm_type_Base::GetColoring_scope ( void  ) const

inline

Get the Coloring_scope member data.

Returns

Copy of the member data.

Definition at line 1016 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetColoring_scope(), CAlgorithm_type_Base::m_Coloring_scope, and CSerialObject::ThrowUnassigned().

GetColumns()

const CMatrix_Base::TColumns & CMatrix_Base::GetColumns ( void  ) const

inline

Get the Columns member data.

Returns

Reference to the member data.

Definition at line 489 of file Matrix_.hpp.

References CMatrix_Base::m_Columns.

GetCommands()

const CCdd_Script_Base::TCommands & CCdd_Script_Base::GetCommands ( void  ) const

inline

Get the Commands member data.

Returns

Reference to the member data.

Definition at line 358 of file Cdd_Script_.hpp.

References CCdd_Script_Base::CanGetCommands(), CCdd_Script_Base::m_Commands, and CSerialObject::ThrowUnassigned().

GetComment() [1/3]

const CCdd_descr_Base::TComment & CCdd_descr_Base::GetComment ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 819 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Comment, and CCdd_descr_Base::m_string.

GetComment() [2/3]

const CFeature_evidence_Base::TComment & CFeature_evidence_Base::GetComment ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 357 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::e_Comment, and CFeature_evidence_Base::m_string.

Referenced by CDDAnnotateDialog::ShowEvidence().

GetComment() [3/3]

const CUpdate_comment_Base::TComment & CUpdate_comment_Base::GetComment ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 359 of file Update_comment_.hpp.

References CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::e_Comment, and CUpdate_comment_Base::m_string.

GetCount()

CCdd_repeat_Base::TCount CCdd_repeat_Base::GetCount ( void  ) const

inline

Get the Count member data.

Returns

Copy of the member data.

Definition at line 262 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::CanGetCount(), CCdd_repeat_Base::m_Count, and CSerialObject::ThrowUnassigned().

GetCreate_date() [1/3]

const CCdd_descr_Base::TCreate_date & CCdd_descr_Base::GetCreate_date

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 264 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Create_date, and CCdd_descr_Base::m_object.

GetCreate_date() [2/3]

const CCdd_pref_node_descr_Base::TCreate_date & CCdd_pref_node_descr_Base::GetCreate_date

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 103 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::CheckSelected(), CCdd_pref_node_descr_Base::e_Create_date, and CCdd_pref_node_descr_Base::m_object.

GetCreate_date() [3/3]

const CCdd_Project_Base::TCreate_date & CCdd_Project_Base::GetCreate_date ( void  ) const

inline

Get the Create_date member data.

Returns

Reference to the member data.

Definition at line 712 of file Cdd_Project_.hpp.

References CCdd_Project_Base::CanGetCreate_date(), CCdd_Project_Base::m_Create_date, and CSerialObject::ThrowUnassigned().

GetCsubelementid()

const CCdd_book_ref_Base::TCsubelementid & CCdd_book_ref_Base::GetCsubelementid ( void  ) const

inline

Get the Csubelementid member data.

Returns

Reference to the member data.

Definition at line 630 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetCsubelementid(), CCdd_book_ref_Base::m_Csubelementid, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), and CDDBookRefDialog::SetWidgetStates().

GetCTerminalExt()

CAlgorithm_type_Base::TCTerminalExt CAlgorithm_type_Base::GetCTerminalExt ( void  ) const

inline

Get the CTerminalExt member data.

Returns

Copy of the member data.

Definition at line 922 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetCTerminalExt(), CAlgorithm_type_Base::m_CTerminalExt, and CSerialObject::ThrowUnassigned().

GetCtrl()

CCdd_Viewer_Base::TCtrl CCdd_Viewer_Base::GetCtrl ( void  ) const

inline

Get the Ctrl member data.

Returns

Copy of the member data.

Definition at line 277 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::CanGetCtrl(), CCdd_Viewer_Base::m_Ctrl, and CSerialObject::ThrowUnassigned().

GetCuration_status()

CCdd_descr_Base::TCuration_status CCdd_descr_Base::GetCuration_status ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 948 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Curation_status, and CCdd_descr_Base::m_Curation_status.

GetDatabase()

const CGlobal_id_Base::TDatabase & CGlobal_id_Base::GetDatabase ( void  ) const

inline

Get the Database member data.

Returns

Reference to the member data.

Definition at line 447 of file Global_id_.hpp.

References CGlobal_id_Base::CanGetDatabase(), CGlobal_id_Base::m_Database, and CSerialObject::ThrowUnassigned().

GetDescription() [1/7]

const CAlign_annot_Base::TDescription & CAlign_annot_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 459 of file Align_annot_.hpp.

References CAlign_annot_Base::CanGetDescription(), CAlign_annot_Base::m_Description, and CSerialObject::ThrowUnassigned().

Referenced by CDDAnnotateDialog::EditAnnotation(), and IBISAnnotateDialog::SetupGUIControls().

GetDescription() [2/7]

const CCdd_Base::TDescription & CCdd_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 1201 of file Cdd_.hpp.

References CCdd_Base::CanGetDescription(), CCdd_Base::m_Description, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::AddComment(), CCdCore::AddOthername(), CCdCore::AddPmidReference(), CCdCore::AddTitle(), ASNDataManager::GetCDDDescription(), ASNDataManager::GetCDDNotes(), CCdCore::GetLongDescription(), CCdCore::GetTitle(), CCdCore::GetTitles(), CCdCore::GetUpdateDate(), and ASNDataManager::SetCDDDescription().

GetDescription() [3/7]

const CCdd_pref_node_descr_Base::TDescription & CCdd_pref_node_descr_Base::GetDescription ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 276 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::CheckSelected(), CCdd_pref_node_descr_Base::e_Description, and CCdd_pref_node_descr_Base::m_string.

GetDescription() [4/7]

const CCdd_pref_nodes_Base::TDescription & CCdd_pref_nodes_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 363 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::CanGetDescription(), CCdd_pref_nodes_Base::m_Description, and CSerialObject::ThrowUnassigned().

GetDescription() [5/7]

const CCdd_tree_Base::TDescription & CCdd_tree_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 506 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetDescription(), CCdd_tree_Base::m_Description, and CSerialObject::ThrowUnassigned().

GetDescription() [6/7]

const CReject_id_Base::TDescription & CReject_id_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 203 of file Reject_id_.hpp.

References CReject_id_Base::m_Description.

GetDescription() [7/7]

const CUpdate_align_Base::TDescription & CUpdate_align_Base::GetDescription ( void  ) const

inline

Get the Description member data.

Returns

Reference to the member data.

Definition at line 265 of file Update_align_.hpp.

References CUpdate_align_Base::m_Description.

Referenced by UpdateViewer::SaveAlignments().

GetDistance() [1/2]

const CCdd_Base::TDistance & CCdd_Base::GetDistance ( void  ) const

inline

Get the Distance member data.

Returns

Reference to the member data.

Definition at line 1373 of file Cdd_.hpp.

References CCdd_Base::CanGetDistance(), CCdd_Base::m_Distance, and CSerialObject::ThrowUnassigned().

GetDistance() [2/2]

CSeqTree_node_Base::TDistance CSeqTree_node_Base::GetDistance ( void  ) const

inline

Get the Distance member data.

Returns

Copy of the member data.

Definition at line 844 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::CanGetDistance(), CSeqTree_node_Base::m_Distance, and CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAsnizer::fillSeqItem().

GetDiv_ranks()

const CTriangle_Base::TDiv_ranks & CTriangle_Base::GetDiv_ranks ( void  ) const

inline

Get the Div_ranks member data.

Returns

Reference to the member data.

Definition at line 320 of file Triangle_.hpp.

References CTriangle_Base::m_Div_ranks.

GetElementid()

CCdd_book_ref_Base::TElementid CCdd_book_ref_Base::GetElementid ( void  ) const

inline

Get the Elementid member data.

Returns

Copy of the member data.

Definition at line 496 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetElementid(), CCdd_book_ref_Base::m_Elementid, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), and CDDBookRefDialog::SetWidgetStates().

GetEvidence()

const CAlign_annot_Base::TEvidence & CAlign_annot_Base::GetEvidence ( void  ) const

inline

Get the Evidence member data.

Returns

Reference to the member data.

Definition at line 506 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Evidence.

Referenced by CDDAnnotateDialog::NewEvidence().

GetFeatures()

const CCdd_Base::TFeatures & CCdd_Base::GetFeatures ( void  ) const

inline

Get the Features member data.

Returns

Reference to the member data.

Definition at line 1247 of file Cdd_.hpp.

References CCdd_Base::CanGetFeatures(), CCdd_Base::m_Features, and CSerialObject::ThrowUnassigned().

Referenced by ReorderStructureAlignments().

GetFootprint()

const CSeqTree_node_Base::C_Children::TFootprint & CSeqTree_node_Base::C_Children::GetFootprint

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 152 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::CheckSelected(), CSeqTree_node_Base::C_Children::e_Footprint, and CSeqTree_node_Base::C_Children::m_object.

Referenced by SeqTreeAsnizer::addChildNode(), and SeqTreeAsnizer::fillSeqItem().

GetGapExtend()

CAlgorithm_type_Base::TGapExtend CAlgorithm_type_Base::GetGapExtend ( void  ) const

inline

Get the GapExtend member data.

Returns

Copy of the member data.

Definition at line 781 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetGapExtend(), CAlgorithm_type_Base::m_GapExtend, and CSerialObject::ThrowUnassigned().

GetGapOpen()

CAlgorithm_type_Base::TGapOpen CAlgorithm_type_Base::GetGapOpen ( void  ) const

inline

Get the GapOpen member data.

Returns

Copy of the member data.

Definition at line 734 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetGapOpen(), CAlgorithm_type_Base::m_GapOpen, and CSerialObject::ThrowUnassigned().

GetGapScaleFactor()

CAlgorithm_type_Base::TGapScaleFactor CAlgorithm_type_Base::GetGapScaleFactor ( void  ) const

inline

Get the GapScaleFactor member data.

Returns

Copy of the member data.

Definition at line 828 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetGapScaleFactor(), CAlgorithm_type_Base::m_GapScaleFactor, and CSerialObject::ThrowUnassigned().

GetGid()

const CCdd_id_Base::TGid & CCdd_id_Base::GetGid

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 100 of file Cdd_id_.cpp.

References CCdd_id_Base::CheckSelected(), CCdd_id_Base::e_Gid, and CCdd_id_Base::m_object.

Referenced by CCdCore::GetClassicalParentAccession(), and SameCDAccession().

GetHeight()

CCdd_Viewer_Rect_Base::THeight CCdd_Viewer_Rect_Base::GetHeight ( void  ) const

inline

Get the Height member data.

Returns

Copy of the member data.

Definition at line 442 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::CanGetHeight(), CCdd_Viewer_Rect_Base::m_Height, and CSerialObject::ThrowUnassigned().

GetId() [1/3]

const CCdd_Base::TId & CCdd_Base::GetId ( void  ) const

inline

Get the Id member data.

Returns

Reference to the member data.

Definition at line 1171 of file Cdd_.hpp.

References CCdd_Base::m_Id, and CCdd_Base::ResetId().

Referenced by CddIdString(), CCdCore::GetAccession(), CCdCore::GetUID(), CCdCore::HasCddId(), and CSeqAnnotFromFasta::MakeSeqAnnotFromFasta().

GetId() [2/3]

const CCdd_Project_Base::TId & CCdd_Project_Base::GetId ( void  ) const

inline

Get the Id member data.

Returns

Reference to the member data.

Definition at line 666 of file Cdd_Project_.hpp.

References CCdd_Project_Base::CanGetId(), CCdd_Project_Base::m_Id, and CSerialObject::ThrowUnassigned().

GetId() [3/3]

const CCdd_tree_Base::TId & CCdd_tree_Base::GetId ( void  ) const

inline

Get the Id member data.

Returns

Reference to the member data.

Definition at line 476 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Id, and CCdd_tree_Base::ResetId().

GetIds()

const CReject_id_Base::TIds & CReject_id_Base::GetIds ( void  ) const

inline

Get the Ids member data.

Returns

Reference to the member data.

Definition at line 228 of file Reject_id_.hpp.

References CReject_id_Base::m_Ids.

GetIsAnnotated() [1/2]

CSeqTree_node_Base::TIsAnnotated CSeqTree_node_Base::GetIsAnnotated ( void  ) const

inline

Get the IsAnnotated member data.

Returns

Copy of the member data.

Definition at line 753 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_IsAnnotated.

GetIsAnnotated() [2/2]

CSequence_tree_Base::TIsAnnotated CSequence_tree_Base::GetIsAnnotated ( void  ) const

inline

Get the IsAnnotated member data.

Returns

Copy of the member data.

Definition at line 390 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_IsAnnotated.

GetLeft()

CCdd_Viewer_Rect_Base::TLeft CCdd_Viewer_Rect_Base::GetLeft ( void  ) const

inline

Get the Left member data.

Returns

Copy of the member data.

Definition at line 348 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::CanGetLeft(), CCdd_Viewer_Rect_Base::m_Left, and CSerialObject::ThrowUnassigned().

GetLocation() [1/2]

const CAlign_annot_Base::TLocation & CAlign_annot_Base::GetLocation ( void  ) const

inline

Get the Location member data.

Returns

Reference to the member data.

Definition at line 429 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Location, and CAlign_annot_Base::ResetLocation().

Referenced by GetPositionsForAlignAnnot(), IBISAnnotateDialog::HighlightAnnotation(), CDDAnnotateDialog::HighlightAnnotation(), and CDDAnnotateDialog::NewOrEditMotif().

GetLocation() [2/2]

const CCdd_repeat_Base::TLocation & CCdd_repeat_Base::GetLocation ( void  ) const

inline

Get the Location member data.

Returns

Reference to the member data.

Definition at line 302 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::CanGetLocation(), CCdd_repeat_Base::m_Location, and CSerialObject::ThrowUnassigned().

GetLog()

const CCdd_Project_Base::TLog & CCdd_Project_Base::GetLog ( void  ) const

inline

Get the Log member data.

Returns

Reference to the member data.

Definition at line 594 of file Cdd_Project_.hpp.

References CCdd_Project_Base::CanGetLog(), CCdd_Project_Base::m_Log, and CSerialObject::ThrowUnassigned().

GetMaster3d()

const CCdd_Base::TMaster3d & CCdd_Base::GetMaster3d ( void  ) const

inline

Get the Master3d member data.

Returns

Reference to the member data.

Definition at line 1528 of file Cdd_.hpp.

References CCdd_Base::m_Master3d.

Referenced by ASNDataManager::GetCDDMaster3d().

GetModel_organisms()

const CCdd_pref_nodes_Base::TModel_organisms & CCdd_pref_nodes_Base::GetModel_organisms ( void  ) const

inline

Get the Model_organisms member data.

Returns

Reference to the member data.

Definition at line 321 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::CanGetModel_organisms(), CCdd_pref_nodes_Base::m_Model_organisms, and CSerialObject::ThrowUnassigned().

Referenced by CPriorityTaxNodes::BuildMap().

GetMotif()

const CAlign_annot_Base::TMotif & CAlign_annot_Base::GetMotif ( void  ) const

inline

Get the Motif member data.

Returns

Reference to the member data.

Definition at line 603 of file Align_annot_.hpp.

References CAlign_annot_Base::CanGetMotif(), CAlign_annot_Base::m_Motif, and CSerialObject::ThrowUnassigned().

Referenced by CDDAnnotateDialog::HighlightMotif(), and CDDAnnotateDialog::NewOrEditMotif().

GetMotifuse()

CAlign_annot_Base::TMotifuse CAlign_annot_Base::GetMotifuse ( void  ) const

inline

Get the Motifuse member data.

Returns

Copy of the member data.

Definition at line 657 of file Align_annot_.hpp.

References CAlign_annot_Base::CanGetMotifuse(), CAlign_annot_Base::m_Motifuse, and CSerialObject::ThrowUnassigned().

GetName() [1/4]

const CCdd_Base::TName & CCdd_Base::GetName ( void  ) const

inline

Get the Name member data.

Returns

Reference to the member data.

Definition at line 1124 of file Cdd_.hpp.

References CCdd_Base::CanGetName(), CCdd_Base::m_Name, and CSerialObject::ThrowUnassigned().

Referenced by ASNDataManager::GetCDDName(), GetVerboseNameStr(), and PssmMaker::modifyQuery().

GetName() [2/4]

const CCdd_Script_Base::TName & CCdd_Script_Base::GetName ( void  ) const

inline

Get the Name member data.

Returns

Reference to the member data.

Definition at line 311 of file Cdd_Script_.hpp.

References CCdd_Script_Base::CanGetName(), CCdd_Script_Base::m_Name, and CSerialObject::ThrowUnassigned().

GetName() [3/4]

const CCdd_tree_Base::TName & CCdd_tree_Base::GetName ( void  ) const

inline

Get the Name member data.

Returns

Reference to the member data.

Definition at line 429 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetName(), CCdd_tree_Base::m_Name, and CSerialObject::ThrowUnassigned().

GetName() [4/4]

const CSeqTree_node_Base::TName & CSeqTree_node_Base::GetName ( void  ) const

inline

Get the Name member data.

Returns

Reference to the member data.

Definition at line 790 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::CanGetName(), CSeqTree_node_Base::m_Name, and CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAsnizer::fillSeqItem().

GetNcolumns()

CMatrix_Base::TNcolumns CMatrix_Base::GetNcolumns ( void  ) const

inline

Get the Ncolumns member data.

Returns

Copy of the member data.

Definition at line 330 of file Matrix_.hpp.

References CMatrix_Base::CanGetNcolumns(), CMatrix_Base::m_Ncolumns, and CSerialObject::ThrowUnassigned().

GetNeighbors() [1/2]

const CCdd_Base::TNeighbors & CCdd_Base::GetNeighbors ( void  ) const

inline

Get the Neighbors member data.

Returns

Reference to the member data.

Definition at line 1457 of file Cdd_.hpp.

References CCdd_Base::CanGetNeighbors(), CCdd_Base::m_Neighbors, and CSerialObject::ThrowUnassigned().

GetNeighbors() [2/2]

const CCdd_tree_Base::TNeighbors & CCdd_tree_Base::GetNeighbors ( void  ) const

inline

Get the Neighbors member data.

Returns

Reference to the member data.

Definition at line 590 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetNeighbors(), CCdd_tree_Base::m_Neighbors, and CSerialObject::ThrowUnassigned().

GetNelements()

CTriangle_Base::TNelements CTriangle_Base::GetNelements ( void  ) const

inline

Get the Nelements member data.

Returns

Copy of the member data.

Definition at line 259 of file Triangle_.hpp.

References CTriangle_Base::CanGetNelements(), CTriangle_Base::m_Nelements, and CSerialObject::ThrowUnassigned().

GetNote()

const CNode_annotation_Base::TNote & CNode_annotation_Base::GetNote ( void  ) const

inline

Get the Note member data.

Returns

Reference to the member data.

Definition at line 259 of file Node_annotation_.hpp.

References CNode_annotation_Base::CanGetNote(), CNode_annotation_Base::m_Note, and CSerialObject::ThrowUnassigned().

GetNrows()

CMatrix_Base::TNrows CMatrix_Base::GetNrows ( void  ) const

inline

Get the Nrows member data.

Returns

Copy of the member data.

Definition at line 377 of file Matrix_.hpp.

References CMatrix_Base::CanGetNrows(), CMatrix_Base::m_Nrows, and CSerialObject::ThrowUnassigned().

GetNTerminalExt()

CAlgorithm_type_Base::TNTerminalExt CAlgorithm_type_Base::GetNTerminalExt ( void  ) const

inline

Get the NTerminalExt member data.

Returns

Copy of the member data.

Definition at line 875 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetNTerminalExt(), CAlgorithm_type_Base::m_NTerminalExt, and CSerialObject::ThrowUnassigned().

GetOld_root()

const CCdd_descr_Base::TOld_root & CCdd_descr_Base::GetOld_root

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 380 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Old_root, and CCdd_descr_Base::m_object.

GetOptional_nodes()

const CCdd_pref_nodes_Base::TOptional_nodes & CCdd_pref_nodes_Base::GetOptional_nodes ( void  ) const

inline

Get the Optional_nodes member data.

Returns

Reference to the member data.

Definition at line 342 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::CanGetOptional_nodes(), CCdd_pref_nodes_Base::m_Optional_nodes, and CSerialObject::ThrowUnassigned().

Referenced by CPriorityTaxNodes::BuildMap().

GetOthername()

const CCdd_descr_Base::TOthername & CCdd_descr_Base::GetOthername ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 779 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Othername, and CCdd_descr_Base::m_string.

GetParent() [1/2]

const CCdd_Base::TParent & CCdd_Base::GetParent ( void  ) const

inline

Get the Parent member data.

Returns

Reference to the member data.

Definition at line 1394 of file Cdd_.hpp.

References CCdd_Base::CanGetParent(), CCdd_Base::m_Parent, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::GetClassicalParentId().

GetParent() [2/2]

const CCdd_tree_Base::TParent & CCdd_tree_Base::GetParent ( void  ) const

inline

Get the Parent member data.

Returns

Reference to the member data.

Definition at line 527 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetParent(), CCdd_tree_Base::m_Parent, and CSerialObject::ThrowUnassigned().

GetParent_tax_id()

CCdd_org_ref_Base::TParent_tax_id CCdd_org_ref_Base::GetParent_tax_id ( void  ) const

inline

Get the Parent_tax_id member data.

Returns

Copy of the member data.

Definition at line 386 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::CanGetParent_tax_id(), CCdd_org_ref_Base::m_Parent_tax_id, and CSerialObject::ThrowUnassigned().

GetParent_type()

CDomain_parent_Base::TParent_type CDomain_parent_Base::GetParent_type ( void  ) const

inline

Get the Parent_type member data.

Returns

Copy of the member data.

Definition at line 288 of file Domain_parent_.hpp.

References CDomain_parent_Base::CanGetParent_type(), CDomain_parent_Base::m_Parent_type, and CSerialObject::ThrowUnassigned().

GetParentid()

const CDomain_parent_Base::TParentid & CDomain_parent_Base::GetParentid ( void  ) const

inline

Get the Parentid member data.

Returns

Reference to the member data.

Definition at line 328 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Parentid, and CDomain_parent_Base::ResetParentid().

GetPending()

const CCdd_Base::TPending & CCdd_Base::GetPending ( void  ) const

inline

Get the Pending member data.

Returns

Reference to the member data.

Definition at line 1478 of file Cdd_.hpp.

References CCdd_Base::m_Pending.

Referenced by CCdCore::GetNumPending(), and CCdCore::HasSeqId().

GetPosfreq()

const CCdd_Base::TPosfreq & CCdd_Base::GetPosfreq ( void  ) const

inline

Get the Posfreq member data.

Returns

Reference to the member data.

Definition at line 1331 of file Cdd_.hpp.

References CCdd_Base::CanGetPosfreq(), CCdd_Base::m_Posfreq, and CSerialObject::ThrowUnassigned().

GetPreferred_nodes()

const CCdd_pref_nodes_Base::TPreferred_nodes & CCdd_pref_nodes_Base::GetPreferred_nodes ( void  ) const

inline

Get the Preferred_nodes member data.

Returns

Reference to the member data.

Definition at line 291 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Preferred_nodes, and CCdd_pref_nodes_Base::ResetPreferred_nodes().

Referenced by CPriorityTaxNodes::BuildMap().

GetPresentInChildCD()

const CNode_annotation_Base::TPresentInChildCD & CNode_annotation_Base::GetPresentInChildCD ( void  ) const

inline

Get the PresentInChildCD member data.

Returns

Reference to the member data.

Definition at line 212 of file Node_annotation_.hpp.

References CNode_annotation_Base::CanGetPresentInChildCD(), CNode_annotation_Base::m_PresentInChildCD, and CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAsnizer::fillSeqItem().

GetProfile_range()

const CCdd_Base::TProfile_range & CCdd_Base::GetProfile_range ( void  ) const

inline

Get the Profile_range member data.

Returns

Reference to the member data.

Definition at line 1289 of file Cdd_.hpp.

References CCdd_Base::CanGetProfile_range(), CCdd_Base::m_Profile_range, and CSerialObject::ThrowUnassigned().

GetProject_id()

CCdd_Project_Base::TProject_id CCdd_Project_Base::GetProject_id ( void  ) const

inline

Get the Project_id member data.

Returns

Copy of the member data.

Definition at line 761 of file Cdd_Project_.hpp.

References CCdd_Project_Base::CanGetProject_id(), CCdd_Project_Base::m_Project_id, and CSerialObject::ThrowUnassigned().

GetRank()

const CCdd_org_ref_Base::TRank & CCdd_org_ref_Base::GetRank ( void  ) const

inline

Get the Rank member data.

Returns

Reference to the member data.

Definition at line 426 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::CanGetRank(), CCdd_org_ref_Base::m_Rank, and CSerialObject::ThrowUnassigned().

GetReadonly_status()

CCdd_descr_Base::TReadonly_status CCdd_descr_Base::GetReadonly_status ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 975 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Readonly_status, and CCdd_descr_Base::m_Readonly_status.

GetRect()

const CCdd_Viewer_Base::TRect & CCdd_Viewer_Base::GetRect ( void  ) const

inline

Get the Rect member data.

Returns

Reference to the member data.

Definition at line 317 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::CanGetRect(), CCdd_Viewer_Base::m_Rect, and CSerialObject::ThrowUnassigned().

GetReference() [1/4]

const CCdd_descr_Base::TReference & CCdd_descr_Base::GetReference

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 242 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Reference, and CCdd_descr_Base::m_object.

Referenced by CDDRefDialog::OnButton().

GetReference() [2/4]

const CCdd_org_ref_Base::TReference & CCdd_org_ref_Base::GetReference ( void  ) const

inline

Get the Reference member data.

Returns

Reference to the member data.

Definition at line 299 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Reference, and CCdd_org_ref_Base::ResetReference().

Referenced by CPriorityTaxNodes::getTaxId(), and CPriorityTaxNodes::getTaxName().

GetReference() [3/4]

const CFeature_evidence_Base::TReference & CFeature_evidence_Base::GetReference

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 127 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::e_Reference, and CFeature_evidence_Base::m_object.

Referenced by CDDAnnotateDialog::SetupGUIControls(), and CDDAnnotateDialog::ShowEvidence().

GetReference() [4/4]

const CUpdate_comment_Base::TReference & CUpdate_comment_Base::GetReference

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 191 of file Update_comment_.cpp.

References CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::e_Reference, and CUpdate_comment_Base::m_object.

GetReject_loc()

const CUpdate_comment_Base::TReject_loc & CUpdate_comment_Base::GetReject_loc

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 169 of file Update_comment_.cpp.

References CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::e_Reject_loc, and CUpdate_comment_Base::m_object.

GetRejects()

const CCdd_Base::TRejects & CCdd_Base::GetRejects ( void  ) const

inline

Get the Rejects member data.

Returns

Reference to the member data.

Definition at line 1503 of file Cdd_.hpp.

References CCdd_Base::m_Rejects.

Referenced by ASNDataManager::GetRejects().

GetRelease()

const CGlobal_id_Base::TRelease & CGlobal_id_Base::GetRelease ( void  ) const

inline

Get the Release member data.

Returns

Reference to the member data.

Definition at line 353 of file Global_id_.hpp.

References CGlobal_id_Base::CanGetRelease(), CGlobal_id_Base::m_Release, and CSerialObject::ThrowUnassigned().

GetRepeats()

const CCdd_descr_Base::TRepeats & CCdd_descr_Base::GetRepeats

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 358 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Repeats, and CCdd_descr_Base::m_object.

GetReplaces()

const CUpdate_comment_Base::TReplaces & CUpdate_comment_Base::GetReplaces

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 147 of file Update_comment_.cpp.

References CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::e_Replaces, and CUpdate_comment_Base::m_object.

GetRids()

const CCdd_Project_Base::TRids & CCdd_Project_Base::GetRids ( void  ) const

inline

Get the Rids member data.

Returns

Reference to the member data.

Definition at line 687 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Rids.

GetRoot()

const CSequence_tree_Base::TRoot & CSequence_tree_Base::GetRoot ( void  ) const

inline

Get the Root member data.

Returns

Reference to the member data.

Definition at line 427 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Root, and CSequence_tree_Base::ResetRoot().

GetRow_labels()

const CMatrix_Base::TRow_labels & CMatrix_Base::GetRow_labels ( void  ) const

inline

Get the Row_labels member data.

Returns

Reference to the member data.

Definition at line 417 of file Matrix_.hpp.

References CMatrix_Base::m_Row_labels.

GetRowId()

CSeqTree_node_Base::C_Children::C_Footprint::TRowId CSeqTree_node_Base::C_Children::C_Footprint::GetRowId ( void  ) const

inline

Get the RowId member data.

Returns

Copy of the member data.

Definition at line 645 of file SeqTree_node_.hpp.

References CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAsnizer::fillSeqItem().

GetScale_factor()

CMatrix_Base::TScale_factor CMatrix_Base::GetScale_factor ( void  ) const

inline

Get the Scale_factor member data.

Returns

Copy of the member data.

Definition at line 449 of file Matrix_.hpp.

References CMatrix_Base::CanGetScale_factor(), CMatrix_Base::m_Scale_factor, and CSerialObject::ThrowUnassigned().

GetScore_Matrix()

CAlgorithm_type_Base::TScore_Matrix CAlgorithm_type_Base::GetScore_Matrix ( void  ) const

inline

Get the Score_Matrix member data.

Returns

Copy of the member data.

Definition at line 687 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetScore_Matrix(), CAlgorithm_type_Base::m_Score_Matrix, and CSerialObject::ThrowUnassigned().

GetScoremat()

const CCdd_Base::TScoremat & CCdd_Base::GetScoremat ( void  ) const

inline

Get the Scoremat member data.

Returns

Reference to the member data.

Definition at line 1352 of file Cdd_.hpp.

References CCdd_Base::CanGetScoremat(), CCdd_Base::m_Scoremat, and CSerialObject::ThrowUnassigned().

GetScoreparams()

const CCdd_Base::TScoreparams & CCdd_Base::GetScoreparams ( void  ) const

inline

Get the Scoreparams member data.

Returns

Reference to the member data.

Definition at line 1641 of file Cdd_.hpp.

References CCdd_Base::CanGetScoreparams(), CCdd_Base::m_Scoreparams, and CSerialObject::ThrowUnassigned().

GetScores()

const CTriangle_Base::TScores & CTriangle_Base::GetScores ( void  ) const

inline

Get the Scores member data.

Returns

Reference to the member data.

Definition at line 299 of file Triangle_.hpp.

References CTriangle_Base::CanGetScores(), CTriangle_Base::m_Scores, and CSerialObject::ThrowUnassigned().

GetScoring_Scheme()

CAlgorithm_type_Base::TScoring_Scheme CAlgorithm_type_Base::GetScoring_Scheme ( void  ) const

inline

Get the Scoring_Scheme member data.

Returns

Copy of the member data.

Definition at line 593 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetScoring_Scheme(), CAlgorithm_type_Base::m_Scoring_Scheme, and CSerialObject::ThrowUnassigned().

GetScrapbook()

const CCdd_descr_Base::TScrapbook & CCdd_descr_Base::GetScrapbook ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 910 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Scrapbook, and CCdd_descr_Base::m_Scrapbook.

GetScripts()

const CCdd_Project_Base::TScripts & CCdd_Project_Base::GetScripts ( void  ) const

inline

Get the Scripts member data.

Returns

Reference to the member data.

Definition at line 641 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Scripts.

GetSeqannot() [1/3]

const CCdd_Base::TSeqannot & CCdd_Base::GetSeqannot ( void  ) const

inline

Get the Seqannot member data.

Returns

Reference to the member data.

Definition at line 1222 of file Cdd_.hpp.

References CCdd_Base::m_Seqannot.

Referenced by CCdCore::GetAlignment(), CCdCore::GetSeqAligns(), CCdCore::Has3DMaster(), CCdCore::IsSeqAligns(), CCdCore::Num3DAlignments(), and SUApp::Run().

GetSeqannot() [2/3]

const CDomain_parent_Base::TSeqannot & CDomain_parent_Base::GetSeqannot ( void  ) const

inline

Get the Seqannot member data.

Returns

Reference to the member data.

Definition at line 358 of file Domain_parent_.hpp.

References CDomain_parent_Base::CanGetSeqannot(), CDomain_parent_Base::m_Seqannot, and CSerialObject::ThrowUnassigned().

GetSeqannot() [3/3]

const CUpdate_align_Base::TSeqannot & CUpdate_align_Base::GetSeqannot ( void  ) const

inline

Get the Seqannot member data.

Returns

Reference to the member data.

Definition at line 290 of file Update_align_.hpp.

References CUpdate_align_Base::CanGetSeqannot(), CUpdate_align_Base::m_Seqannot, and CSerialObject::ThrowUnassigned().

Referenced by UpdateViewer::SaveAlignments().

GetSeqfeat()

const CFeature_evidence_Base::TSeqfeat & CFeature_evidence_Base::GetSeqfeat

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 171 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::e_Seqfeat, and CFeature_evidence_Base::m_object.

GetSeqRange()

const CSeqTree_node_Base::C_Children::C_Footprint::TSeqRange & CSeqTree_node_Base::C_Children::C_Footprint::GetSeqRange ( void  ) const

inline

Get the SeqRange member data.

Returns

Reference to the member data.

Definition at line 608 of file SeqTree_node_.hpp.

Referenced by SeqTreeAsnizer::addChildNode(), and SeqTreeAsnizer::fillSeqItem().

GetSeqtree()

const CCdd_Base::TSeqtree & CCdd_Base::GetSeqtree ( void  ) const

inline

Get the Seqtree member data.

Returns

Reference to the member data.

Definition at line 1662 of file Cdd_.hpp.

References CCdd_Base::CanGetSeqtree(), CCdd_Base::m_Seqtree, and CSerialObject::ThrowUnassigned().

Referenced by SeqTreeAPI::loadAndValidateExistingTree(), and SeqTreeAPI::loadExistingTree().

GetSequences()

const CCdd_Base::TSequences & CCdd_Base::GetSequences ( void  ) const

inline

Get the Sequences member data.

Returns

Reference to the member data.

Definition at line 1268 of file Cdd_.hpp.

References CCdd_Base::CanGetSequences(), CCdd_Base::m_Sequences, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::CopyBioseqForSeqId(), CCdCore::EraseSequence(), CCdCore::EraseSequences(), CCdCore::GetBioseqWithSeqId(), CCdCore::GetDefline(), CCdCore::GetGIFromSequenceList(), CCdCore::GetMmdbId(), CCdCore::GetNumSequences(), CCdCore::GetSeqEntryForIndex(), CCdCore::GetSeqEntryForRow(), CCdCore::GetSeqIDForIndex(), CCdCore::GetSeqIDs(), CCdCore::GetSeqIndex(), and SUApp::Run().

GetSiblings() [1/2]

const CCdd_Base::TSiblings & CCdd_Base::GetSiblings ( void  ) const

inline

Get the Siblings member data.

Returns

Reference to the member data.

Definition at line 1436 of file Cdd_.hpp.

References CCdd_Base::CanGetSiblings(), CCdd_Base::m_Siblings, and CSerialObject::ThrowUnassigned().

GetSiblings() [2/2]

const CCdd_tree_Base::TSiblings & CCdd_tree_Base::GetSiblings ( void  ) const

inline

Get the Siblings member data.

Returns

Reference to the member data.

Definition at line 569 of file Cdd_tree_.hpp.

References CCdd_tree_Base::CanGetSiblings(), CCdd_tree_Base::m_Siblings, and CSerialObject::ThrowUnassigned().

GetSource()

const CCdd_descr_Base::TSource & CCdd_descr_Base::GetSource ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 857 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Source, and CCdd_descr_Base::m_string.

GetSource_id()

const CCdd_descr_Base::TSource_id & CCdd_descr_Base::GetSource_id

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 336 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Source_id, and CCdd_descr_Base::m_object.

GetStatus()

CCdd_descr_Base::TStatus CCdd_descr_Base::GetStatus ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 877 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Status, and CCdd_descr_Base::m_Status.

GetStyle_dictionary()

const CCdd_Base::TStyle_dictionary & CCdd_Base::GetStyle_dictionary ( void  ) const

inline

Get the Style_dictionary member data.

Returns

Reference to the member data.

Definition at line 1574 of file Cdd_.hpp.

References CCdd_Base::CanGetStyle_dictionary(), CCdd_Base::m_Style_dictionary, and CSerialObject::ThrowUnassigned().

GetSubelementid()

CCdd_book_ref_Base::TSubelementid CCdd_book_ref_Base::GetSubelementid ( void  ) const

inline

Get the Subelementid member data.

Returns

Copy of the member data.

Definition at line 543 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetSubelementid(), CCdd_book_ref_Base::m_Subelementid, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), and CDDBookRefDialog::SetWidgetStates().

GetTax_source()

const CCdd_descr_Base::TTax_source & CCdd_descr_Base::GetTax_source

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 286 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Tax_source, and CCdd_descr_Base::m_object.

GetTextelement()

CCdd_book_ref_Base::TTextelement CCdd_book_ref_Base::GetTextelement ( void  ) const

inline

Get the Textelement member data.

Returns

Copy of the member data.

Definition at line 449 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::CanGetTextelement(), CCdd_book_ref_Base::m_Textelement, and CSerialObject::ThrowUnassigned().

Referenced by CCddBookRefToBrString(), CCddBookRefToBvString(), CCddBookRefToPortalString(), and CDDBookRefDialog::SetWidgetStates().

GetTitle()

const CCdd_descr_Base::TTitle & CCdd_descr_Base::GetTitle ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 1014 of file Cdd_descr_.hpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Title, and CCdd_descr_Base::m_string.

GetTop()

CCdd_Viewer_Rect_Base::TTop CCdd_Viewer_Rect_Base::GetTop ( void  ) const

inline

Get the Top member data.

Returns

Copy of the member data.

Definition at line 301 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::CanGetTop(), CCdd_Viewer_Rect_Base::m_Top, and CSerialObject::ThrowUnassigned().

GetTree_scope()

CAlgorithm_type_Base::TTree_scope CAlgorithm_type_Base::GetTree_scope ( void  ) const

inline

Get the Tree_scope member data.

Returns

Copy of the member data.

Definition at line 969 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::CanGetTree_scope(), CAlgorithm_type_Base::m_Tree_scope, and CSerialObject::ThrowUnassigned().

GetTrunc_master()

const CCdd_Base::TTrunc_master & CCdd_Base::GetTrunc_master ( void  ) const

inline

Get the Trunc_master member data.

Returns

Reference to the member data.

Definition at line 1310 of file Cdd_.hpp.

References CCdd_Base::CanGetTrunc_master(), CCdd_Base::m_Trunc_master, and CSerialObject::ThrowUnassigned().

GetType() [1/3]

CAlign_annot_Base::TType CAlign_annot_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Copy of the member data.

Definition at line 538 of file Align_annot_.hpp.

References CAlign_annot_Base::CanGetType(), CAlign_annot_Base::m_Type, and CSerialObject::ThrowUnassigned().

Referenced by CDDAnnotateDialog::EditAnnotation().

GetType() [2/3]

CCdd_Script_Base::TType CCdd_Script_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Copy of the member data.

Definition at line 271 of file Cdd_Script_.hpp.

References CCdd_Script_Base::CanGetType(), CCdd_Script_Base::m_Type, and CSerialObject::ThrowUnassigned().

GetType() [3/3]

CUpdate_align_Base::TType CUpdate_align_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Copy of the member data.

Definition at line 318 of file Update_align_.hpp.

References CUpdate_align_Base::CanGetType(), CUpdate_align_Base::m_Type, and CSerialObject::ThrowUnassigned().

GetUid()

CCdd_id_Base::TUid CCdd_id_Base::GetUid ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 266 of file Cdd_id_.hpp.

References CCdd_id_Base::CheckSelected(), CCdd_id_Base::e_Uid, and CCdd_id_Base::m_Uid.

GetUpdate_date() [1/2]

const CCdd_descr_Base::TUpdate_date & CCdd_descr_Base::GetUpdate_date

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 314 of file Cdd_descr_.cpp.

References CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::e_Update_date, and CCdd_descr_Base::m_object.

GetUpdate_date() [2/2]

const CCdd_Project_Base::TUpdate_date & CCdd_Project_Base::GetUpdate_date ( void  ) const

inline

Get the Update_date member data.

Returns

Reference to the member data.

Definition at line 733 of file Cdd_Project_.hpp.

References CCdd_Project_Base::CanGetUpdate_date(), CCdd_Project_Base::m_Update_date, and CSerialObject::ThrowUnassigned().

GetUser_annotations()

const CCdd_Base::TUser_annotations & CCdd_Base::GetUser_annotations ( void  ) const

inline

Get the User_annotations member data.

Returns

Reference to the member data.

Definition at line 1595 of file Cdd_.hpp.

References CCdd_Base::CanGetUser_annotations(), CCdd_Base::m_User_annotations, and CSerialObject::ThrowUnassigned().

GetVersion()

CGlobal_id_Base::TVersion CGlobal_id_Base::GetVersion ( void  ) const

inline

Get the Version member data.

Returns

Copy of the member data.

Definition at line 407 of file Global_id_.hpp.

References CGlobal_id_Base::CanGetVersion(), CGlobal_id_Base::m_Version, and CSerialObject::ThrowUnassigned().

Referenced by CCdCore::GetClassicalParentAccession().

GetViewers()

const CCdd_Project_Base::TViewers & CCdd_Project_Base::GetViewers ( void  ) const

inline

Get the Viewers member data.

Returns

Reference to the member data.

Definition at line 569 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Viewers.

GetWidth()

CCdd_Viewer_Rect_Base::TWidth CCdd_Viewer_Rect_Base::GetWidth ( void  ) const

inline

Get the Width member data.

Returns

Copy of the member data.

Definition at line 395 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::CanGetWidth(), CCdd_Viewer_Rect_Base::m_Width, and CSerialObject::ThrowUnassigned().

IsAddthis()

bool CUpdate_comment_Base::IsAddthis ( void  ) const

inline

Check if variant Addthis is selected.

Addthis type is defined as 'typedef CSeq_loc TAddthis'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 373 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Addthis, and CUpdate_comment_Base::m_choice.

IsAttribution()

bool CCdd_descr_Base::IsAttribution ( void  ) const

inline

Check if variant Attribution is selected.

Attribution type is defined as 'typedef CPub TAttribution'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 1002 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Attribution, and CCdd_descr_Base::m_choice.

IsBook_ref() [1/2]

bool CCdd_descr_Base::IsBook_ref ( void  ) const

inline

Check if variant Book_ref is selected.

Book_ref type is defined as 'typedef CCdd_book_ref TBook_ref'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 996 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Book_ref, and CCdd_descr_Base::m_choice.

IsBook_ref() [2/2]

bool CFeature_evidence_Base::IsBook_ref ( void  ) const

inline

Check if variant Book_ref is selected.

Book_ref type is defined as 'typedef CCdd_book_ref TBook_ref'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 389 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Book_ref, and CFeature_evidence_Base::m_choice.

IsBsannot()

bool CFeature_evidence_Base::IsBsannot ( void  ) const

inline

Check if variant Bsannot is selected.

Bsannot type is defined as 'typedef CBiostruc_annot_set TBsannot'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 377 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Bsannot, and CFeature_evidence_Base::m_choice.

IsCategory()

bool CCdd_descr_Base::IsCategory ( void  ) const

inline

Check if variant Category is selected.

Category type is defined as 'typedef string TCategory'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 793 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Category, and CCdd_descr_Base::m_choice.

IsChildren()

bool CSeqTree_node_Base::C_Children::IsChildren ( void  ) const

inline

Check if variant Children is selected.

Children type is defined as 'typedef list< CRef< CSeqTree_node > > TChildren'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 702 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::e_Children, and CSeqTree_node_Base::C_Children::m_choice.

Referenced by SeqTreeAsnizer::addChildNode(), and SeqTreeAsnizer::convertToSeqTree().

IsComment() [1/3]

bool CCdd_descr_Base::IsComment ( void  ) const

inline

Check if variant Comment is selected.

Comment type is defined as 'typedef string TComment'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 813 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Comment, and CCdd_descr_Base::m_choice.

IsComment() [2/3]

bool CFeature_evidence_Base::IsComment ( void  ) const

inline

Check if variant Comment is selected.

Comment type is defined as 'typedef string TComment'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 351 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Comment, and CFeature_evidence_Base::m_choice.

Referenced by CDDAnnotateDialog::SetupGUIControls(), and CDDAnnotateDialog::ShowEvidence().

IsComment() [3/3]

bool CUpdate_comment_Base::IsComment ( void  ) const

inline

Check if variant Comment is selected.

Comment type is defined as 'typedef string TComment'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 353 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Comment, and CUpdate_comment_Base::m_choice.

IsCreate_date() [1/2]

bool CCdd_descr_Base::IsCreate_date ( void  ) const

inline

Check if variant Create_date is selected.

Create_date type is defined as 'typedef CDate TCreate_date'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 839 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Create_date, and CCdd_descr_Base::m_choice.

IsCreate_date() [2/2]

bool CCdd_pref_node_descr_Base::IsCreate_date ( void  ) const

inline

Check if variant Create_date is selected.

Create_date type is defined as 'typedef CDate TCreate_date'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 264 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::e_Create_date, and CCdd_pref_node_descr_Base::m_choice.

IsCuration_status()

bool CCdd_descr_Base::IsCuration_status ( void  ) const

inline

Check if variant Curation_status is selected.

Curation_status type is defined as 'typedef int TCuration_status'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 942 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Curation_status, and CCdd_descr_Base::m_choice.

IsDescription()

bool CCdd_pref_node_descr_Base::IsDescription ( void  ) const

inline

Check if variant Description is selected.

Description type is defined as 'typedef string TDescription'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 270 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::e_Description, and CCdd_pref_node_descr_Base::m_choice.

IsFootprint()

bool CSeqTree_node_Base::C_Children::IsFootprint ( void  ) const

inline

Check if variant Footprint is selected.

Footprint type is defined as 'typedef C_Footprint TFootprint'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 722 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::e_Footprint, and CSeqTree_node_Base::C_Children::m_choice.

Referenced by SeqTreeAsnizer::fillSeqItem().

IsGid()

bool CCdd_id_Base::IsGid ( void  ) const

inline

Check if variant Gid is selected.

Gid type is defined as 'typedef CGlobal_id TGid'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 287 of file Cdd_id_.hpp.

References CCdd_id_Base::e_Gid, and CCdd_id_Base::m_choice.

Referenced by CCdCore::GetClassicalParentAccession().

IsOld_root()

bool CCdd_descr_Base::IsOld_root ( void  ) const

inline

Check if variant Old_root is selected.

Old_root type is defined as 'typedef CCdd_id_set TOld_root'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 936 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Old_root, and CCdd_descr_Base::m_choice.

IsOthername()

bool CCdd_descr_Base::IsOthername ( void  ) const

inline

Check if variant Othername is selected.

Othername type is defined as 'typedef string TOthername'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 773 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Othername, and CCdd_descr_Base::m_choice.

IsReadonly_status()

bool CCdd_descr_Base::IsReadonly_status ( void  ) const

inline

Check if variant Readonly_status is selected.

Readonly_status type is defined as 'typedef int TReadonly_status'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 969 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Readonly_status, and CCdd_descr_Base::m_choice.

IsReference() [1/3]

bool CCdd_descr_Base::IsReference ( void  ) const

inline

Check if variant Reference is selected.

Reference type is defined as 'typedef CPub TReference'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 833 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Reference, and CCdd_descr_Base::m_choice.

IsReference() [2/3]

bool CFeature_evidence_Base::IsReference ( void  ) const

inline

Check if variant Reference is selected.

Reference type is defined as 'typedef CPub TReference'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 371 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Reference, and CFeature_evidence_Base::m_choice.

Referenced by CDDAnnotateDialog::SetupGUIControls(), and CDDAnnotateDialog::ShowEvidence().

IsReference() [3/3]

bool CUpdate_comment_Base::IsReference ( void  ) const

inline

Check if variant Reference is selected.

Reference type is defined as 'typedef CPub TReference'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 391 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Reference, and CUpdate_comment_Base::m_choice.

IsReject_loc()

bool CUpdate_comment_Base::IsReject_loc ( void  ) const

inline

Check if variant Reject_loc is selected.

Reject_loc type is defined as 'typedef CSeq_loc TReject_loc'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 385 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Reject_loc, and CUpdate_comment_Base::m_choice.

IsRepeats()

bool CCdd_descr_Base::IsRepeats ( void  ) const

inline

Check if variant Repeats is selected.

Repeats type is defined as 'typedef CCdd_repeat TRepeats'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 930 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Repeats, and CCdd_descr_Base::m_choice.

IsReplaces()

bool CUpdate_comment_Base::IsReplaces ( void  ) const

inline

Check if variant Replaces is selected.

Replaces type is defined as 'typedef CSeq_loc TReplaces'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 379 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Replaces, and CUpdate_comment_Base::m_choice.

IsScrapbook()

bool CCdd_descr_Base::IsScrapbook ( void  ) const

inline

Check if variant Scrapbook is selected.

Scrapbook type is defined as 'typedef list< string > TScrapbook'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 904 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Scrapbook, and CCdd_descr_Base::m_choice.

IsSeqfeat()

bool CFeature_evidence_Base::IsSeqfeat ( void  ) const

inline

Check if variant Seqfeat is selected.

Seqfeat type is defined as 'typedef CSeq_feat TSeqfeat'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 383 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Seqfeat, and CFeature_evidence_Base::m_choice.

IsSet() [1/7]

bool CAlign_annot_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CAlign_annot > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Align_annot_set_.hpp.

References CAlign_annot_set_Base::m_set_State.

IsSet() [2/7]

bool CCdd_descr_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd_descr > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_descr_set_.hpp.

References CCdd_descr_set_Base::m_set_State.

IsSet() [3/7]

bool CCdd_id_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd_id > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_id_set_.hpp.

References CCdd_id_set_Base::m_set_State.

IsSet() [4/7]

bool CCdd_org_ref_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd_org_ref > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_org_ref_set_.hpp.

References CCdd_org_ref_set_Base::m_set_State.

IsSet() [5/7]

bool CCdd_pref_node_descr_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd_pref_node_descr > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_pref_node_descr_set_.hpp.

References CCdd_pref_node_descr_set_Base::m_set_State.

IsSet() [6/7]

bool CCdd_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_set_.hpp.

References CCdd_set_Base::m_set_State.

IsSet() [7/7]

bool CCdd_tree_set_Base::IsSet ( void  ) const

inline

Check if a value has been assigned to data member.

Data member is mandatory; its type is defined as 'typedef list< CRef< CCdd_tree > > Tdata'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 152 of file Cdd_tree_set_.hpp.

References CCdd_tree_set_Base::m_set_State.

IsSetAccession()

bool CGlobal_id_Base::IsSetAccession ( void  ) const

inline

SMART, Pfam, LOAD or CD accession Check if a value has been assigned to Accession data member.

Data member Accession is mandatory; its type is defined as 'typedef string TAccession'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 294 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::CanGetAccession(), and CGlobal_id_Base::SetAccession().

IsSetAccessions()

bool CCdd_Viewer_Base::IsSetAccessions ( void  ) const

inline

list of accessions associated with a viewer Check if a value has been assigned to Accessions data member.

Data member Accessions is mandatory; its type is defined as 'typedef list< string > TAccessions'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 326 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_set_State.

IsSetActive()

bool CCdd_org_ref_Base::IsSetActive ( void  ) const

inline

Check if a value has been assigned to Active data member.

Data member Active is optional with default true; its type is defined as 'typedef bool TActive'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 317 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::SetActive().

IsSetAlgorithm()

bool CSequence_tree_Base::IsSetAlgorithm ( void  ) const

inline

Check if a value has been assigned to Algorithm data member.

Data member Algorithm is mandatory; its type is defined as 'typedef CAlgorithm_type TAlgorithm'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 335 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Algorithm.

IsSetAliases()

bool CAlign_annot_Base::IsSetAliases ( void  ) const

inline

adding more names for indexing Check if a value has been assigned to Aliases data member.

Data member Aliases is optional; its type is defined as 'typedef list< string > TAliases'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 566 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

IsSetAlignannot()

bool CCdd_Base::IsSetAlignannot ( void  ) const

inline

alignment annotation Check if a value has been assigned to Alignannot data member.

Data member Alignannot is optional; its type is defined as 'typedef CAlign_annot_set TAlignannot'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1541 of file Cdd_.hpp.

References CCdd_Base::m_Alignannot.

Referenced by CCdCore::AlignAnnotsValid(), CCdd_Base::CanGetAlignannot(), ASNDataManager::GetCDDAnnotSet(), CCdCore::GetNumAlignmentAnnotations(), and remasterAlignannot().

IsSetAncestors()

bool CCdd_Base::IsSetAncestors ( void  ) const

inline

list of parents Check if a value has been assigned to Ancestors data member.

Data member Ancestors is optional; its type is defined as 'typedef list< CRef< CDomain_parent > > TAncestors'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1604 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by CCdCore::GetClassicalParentId(), CCdCore::HasParentType(), and obeysParentTypeConstraints().

IsSetAnnotation()

bool CSeqTree_node_Base::IsSetAnnotation ( void  ) const

inline

Check if a value has been assigned to Annotation data member.

Data member Annotation is optional; its type is defined as 'typedef CNode_annotation TAnnotation'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 902 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_Annotation.

Referenced by CSeqTree_node_Base::CanGetAnnotation().

IsSetAvglen()

bool CCdd_repeat_Base::IsSetAvglen ( void  ) const

inline

average repeat length Check if a value has been assigned to Avglen data member.

Data member Avglen is optional; its type is defined as 'typedef int TAvglen'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 311 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_set_State.

Referenced by CCdd_repeat_Base::CanGetAvglen(), and CCdd_repeat_Base::SetAvglen().

IsSetBookname()

bool CCdd_book_ref_Base::IsSetBookname ( void  ) const

inline

abbreviated book title Check if a value has been assigned to Bookname data member.

Data member Bookname is mandatory; its type is defined as 'typedef string TBookname'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 383 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetBookname(), and CCdd_book_ref_Base::SetBookname().

IsSetCdAccession()

bool CSequence_tree_Base::IsSetCdAccession ( void  ) const

inline

Check if a value has been assigned to CdAccession data member.

Data member CdAccession is optional; its type is defined as 'typedef string TCdAccession'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 288 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_set_State.

Referenced by CSequence_tree_Base::CanGetCdAccession(), and CSequence_tree_Base::SetCdAccession().

IsSetCdcolor()

bool CCdd_Project_Base::IsSetCdcolor ( void  ) const

inline

colors Check if a value has been assigned to Cdcolor data member.

Data member Cdcolor is mandatory; its type is defined as 'typedef list< int > TCdcolor'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 532 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

IsSetCds()

bool CCdd_Project_Base::IsSetCds ( void  ) const

inline

cds Check if a value has been assigned to Cds data member.

Data member Cds is mandatory; its type is defined as 'typedef list< CRef< CCdd > > TCds'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 507 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

IsSetCelementid()

bool CCdd_book_ref_Base::IsSetCelementid ( void  ) const

inline

address of the text element, if character string Check if a value has been assigned to Celementid data member.

Data member Celementid is optional; its type is defined as 'typedef string TCelementid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 571 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetCelementid(), CCddBookRefToBrString(), CCddBookRefToBvString(), CCddBookRefToPortalString(), MakeBrParameterString(), and CCdd_book_ref_Base::SetCelementid().

IsSetChildren() [1/3]

bool CCdd_Base::IsSetChildren ( void  ) const

inline

this CD has been split, not used Check if a value has been assigned to Children data member.

Data member Children is optional; its type is defined as 'typedef CCdd_id_set TChildren'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1403 of file Cdd_.hpp.

References CCdd_Base::m_Children.

Referenced by CCdd_Base::CanGetChildren().

IsSetChildren() [2/3]

bool CCdd_tree_Base::IsSetChildren ( void  ) const

inline

this CD has been split Check if a value has been assigned to Children data member.

Data member Children is optional; its type is defined as 'typedef CCdd_id_set TChildren'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 536 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Children.

Referenced by CCdd_tree_Base::CanGetChildren().

IsSetChildren() [3/3]

bool CSeqTree_node_Base::IsSetChildren ( void  ) const

inline

Check if a value has been assigned to Children data member.

Data member Children is mandatory; its type is defined as 'typedef C_Children TChildren'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 872 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::m_Children.

IsSetClustering_Method()

bool CAlgorithm_type_Base::IsSetClustering_Method ( void  ) const

inline

Check if a value has been assigned to Clustering_Method data member.

Data member Clustering_Method is mandatory; its type is defined as 'typedef int TClustering_Method'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 621 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetClustering_Method(), and CAlgorithm_type_Base::SetClustering_Method().

IsSetColoring_scope()

bool CAlgorithm_type_Base::IsSetColoring_scope ( void  ) const

inline

Check if a value has been assigned to Coloring_scope data member.

Data member Coloring_scope is optional; its type is defined as 'typedef int TColoring_scope'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 997 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetColoring_scope(), and CAlgorithm_type_Base::SetColoring_scope().

IsSetColumns()

bool CMatrix_Base::IsSetColumns ( void  ) const

inline

Check if a value has been assigned to Columns data member.

Data member Columns is mandatory; its type is defined as 'typedef list< int > TColumns'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 477 of file Matrix_.hpp.

References CMatrix_Base::m_set_State.

IsSetCommands()

bool CCdd_Script_Base::IsSetCommands ( void  ) const

inline

actual script commands Check if a value has been assigned to Commands data member.

Data member Commands is mandatory; its type is defined as 'typedef string TCommands'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 346 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_set_State.

Referenced by CCdd_Script_Base::CanGetCommands(), and CCdd_Script_Base::SetCommands().

IsSetCount()

bool CCdd_repeat_Base::IsSetCount ( void  ) const

inline

number of tandem repeats in the CD Check if a value has been assigned to Count data member.

Data member Count is mandatory; its type is defined as 'typedef int TCount'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 243 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_set_State.

Referenced by CCdd_repeat_Base::CanGetCount(), and CCdd_repeat_Base::SetCount().

IsSetCreate_date()

bool CCdd_Project_Base::IsSetCreate_date ( void  ) const

inline

Check if a value has been assigned to Create_date data member.

Data member Create_date is optional; its type is defined as 'typedef CDate TCreate_date'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 700 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Create_date.

Referenced by CCdd_Project_Base::CanGetCreate_date().

IsSetCsubelementid()

bool CCdd_book_ref_Base::IsSetCsubelementid ( void  ) const

inline

exact address, if character string Check if a value has been assigned to Csubelementid data member.

Data member Csubelementid is optional; its type is defined as 'typedef string TCsubelementid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 618 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetCsubelementid(), CCddBookRefToBrString(), CCddBookRefToBvString(), MakeBrParameterString(), CCdd_book_ref_Base::SetCsubelementid(), and CDDBookRefDialog::SetWidgetStates().

IsSetCTerminalExt()

bool CAlgorithm_type_Base::IsSetCTerminalExt ( void  ) const

inline

Check if a value has been assigned to CTerminalExt data member.

Data member CTerminalExt is optional; its type is defined as 'typedef int TCTerminalExt'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 903 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetCTerminalExt(), and CAlgorithm_type_Base::SetCTerminalExt().

IsSetCtrl()

bool CCdd_Viewer_Base::IsSetCtrl ( void  ) const

inline

Check if a value has been assigned to Ctrl data member.

Data member Ctrl is mandatory; its type is defined as 'typedef int TCtrl'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 258 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_set_State.

Referenced by CCdd_Viewer_Base::CanGetCtrl(), and CCdd_Viewer_Base::SetCtrl().

IsSetDatabase()

bool CGlobal_id_Base::IsSetDatabase ( void  ) const

inline

this is NOT the source!, rather the Check if a value has been assigned to Database data member.

Data member Database is optional; its type is defined as 'typedef string TDatabase'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 435 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::CanGetDatabase(), and CGlobal_id_Base::SetDatabase().

IsSetDescription() [1/6]

bool CAlign_annot_Base::IsSetDescription ( void  ) const

inline

to hold descriptions/names like "Heme binding site" or "catalytic triad" etc., something that should be used for labels in visualization Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef string TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 447 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::CanGetDescription(), CDDAnnotateDialog::EditAnnotation(), CAlign_annot_Base::SetDescription(), and IBISAnnotateDialog::SetupGUIControls().

IsSetDescription() [2/6]

bool CCdd_Base::IsSetDescription ( void  ) const

inline

status, references, etc.

Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef CCdd_descr_set TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1189 of file Cdd_.hpp.

References CCdd_Base::m_Description.

Referenced by CCdCore::AddCddDescr(), CCdCore::AddComment(), CCdCore::AddOthername(), CCdCore::AddPmidReference(), CCdCore::AddTitle(), CCdd_Base::CanGetDescription(), ASNDataManager::GetCDDDescription(), ASNDataManager::GetCDDDescrSet(), ASNDataManager::GetCDDNotes(), CCdCore::GetLongDescription(), CCdCore::GetTitle(), CCdCore::GetTitles(), CCdCore::GetUpdateDate(), CCdCore::RemoveCddDescrsOfType(), ASNDataManager::SetCDDDescription(), ASNDataManager::SetCDDNotes(), CCdCore::SetComment(), and CCdFromFasta::UpdateSourceId().

IsSetDescription() [3/6]

bool CCdd_pref_nodes_Base::IsSetDescription ( void  ) const

inline

Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef CCdd_pref_node_descr_set TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 351 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Description.

Referenced by CCdd_pref_nodes_Base::CanGetDescription().

IsSetDescription() [4/6]

bool CCdd_tree_Base::IsSetDescription ( void  ) const

inline

description copied from CD Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef CCdd_descr_set TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 494 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Description.

Referenced by CCdd_tree_Base::CanGetDescription().

IsSetDescription() [5/6]

bool CReject_id_Base::IsSetDescription ( void  ) const

inline

Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef list< CRef< CUpdate_comment > > TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 191 of file Reject_id_.hpp.

References CReject_id_Base::m_set_State.

IsSetDescription() [6/6]

bool CUpdate_align_Base::IsSetDescription ( void  ) const

inline

Check if a value has been assigned to Description data member.

Data member Description is optional; its type is defined as 'typedef list< CRef< CUpdate_comment > > TDescription'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 253 of file Update_align_.hpp.

References CUpdate_align_Base::m_set_State.

IsSetDistance() [1/2]

bool CCdd_Base::IsSetDistance ( void  ) const

inline

pairwise distances for all seqs.

Check if a value has been assigned to Distance data member.

Data member Distance is optional; its type is defined as 'typedef CTriangle TDistance'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1361 of file Cdd_.hpp.

References CCdd_Base::m_Distance.

Referenced by CCdd_Base::CanGetDistance().

IsSetDistance() [2/2]

bool CSeqTree_node_Base::IsSetDistance ( void  ) const

inline

Check if a value has been assigned to Distance data member.

Data member Distance is optional; its type is defined as 'typedef double TDistance'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 825 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::CanGetDistance(), and CSeqTree_node_Base::SetDistance().

IsSetDiv_ranks()

bool CTriangle_Base::IsSetDiv_ranks ( void  ) const

inline

Check if a value has been assigned to Div_ranks data member.

Data member Div_ranks is optional; its type is defined as 'typedef list< int > TDiv_ranks'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 308 of file Triangle_.hpp.

References CTriangle_Base::m_set_State.

IsSetElementid()

bool CCdd_book_ref_Base::IsSetElementid ( void  ) const

inline

numerical address of the text-element Check if a value has been assigned to Elementid data member.

Data member Elementid is optional; its type is defined as 'typedef int TElementid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 477 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetElementid(), CCddBookRefToBrString(), CCddBookRefToBvString(), MakeBrParameterString(), CCdd_book_ref_Base::SetElementid(), and CDDBookRefDialog::SetWidgetStates().

IsSetEvidence()

bool CAlign_annot_Base::IsSetEvidence ( void  ) const

inline

evidence we can compute with Check if a value has been assigned to Evidence data member.

Data member Evidence is optional; its type is defined as 'typedef list< CRef< CFeature_evidence > > TEvidence'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 494 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

Referenced by CDDAnnotateDialog::SetupGUIControls().

IsSetFeatures()

bool CCdd_Base::IsSetFeatures ( void  ) const

inline

contains structure alignment data or "core" definitions Check if a value has been assigned to Features data member.

Data member Features is optional; its type is defined as 'typedef CBiostruc_annot_set TFeatures'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1235 of file Cdd_.hpp.

References CCdd_Base::m_Features.

Referenced by CCdd_Base::CanGetFeatures(), and ReorderStructureAlignments().

IsSetGapExtend()

bool CAlgorithm_type_Base::IsSetGapExtend ( void  ) const

inline

Check if a value has been assigned to GapExtend data member.

Data member GapExtend is optional; its type is defined as 'typedef int TGapExtend'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 762 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetGapExtend(), and CAlgorithm_type_Base::SetGapExtend().

IsSetGapOpen()

bool CAlgorithm_type_Base::IsSetGapOpen ( void  ) const

inline

Check if a value has been assigned to GapOpen data member.

Data member GapOpen is optional; its type is defined as 'typedef int TGapOpen'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 715 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetGapOpen(), and CAlgorithm_type_Base::SetGapOpen().

IsSetGapScaleFactor()

bool CAlgorithm_type_Base::IsSetGapScaleFactor ( void  ) const

inline

Check if a value has been assigned to GapScaleFactor data member.

Data member GapScaleFactor is optional; its type is defined as 'typedef int TGapScaleFactor'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 809 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetGapScaleFactor(), and CAlgorithm_type_Base::SetGapScaleFactor().

IsSetHeight()

bool CCdd_Viewer_Rect_Base::IsSetHeight ( void  ) const

inline

height Check if a value has been assigned to Height data member.

Data member Height is mandatory; its type is defined as 'typedef int THeight'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 423 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::CanGetHeight(), and CCdd_Viewer_Rect_Base::SetHeight().

IsSetId() [1/3]

bool CCdd_Base::IsSetId ( void  ) const

inline

this CD's Ids Check if a value has been assigned to Id data member.

Data member Id is mandatory; its type is defined as 'typedef CCdd_id_set TId'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1159 of file Cdd_.hpp.

References CCdd_Base::m_Id.

IsSetId() [2/3]

bool CCdd_Project_Base::IsSetId ( void  ) const

inline

to assign unique project id Check if a value has been assigned to Id data member.

Data member Id is optional; its type is defined as 'typedef CCdd_id_set TId'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 654 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Id.

Referenced by CCdd_Project_Base::CanGetId().

IsSetId() [3/3]

bool CCdd_tree_Base::IsSetId ( void  ) const

inline

IDs copied from CD Check if a value has been assigned to Id data member.

Data member Id is mandatory; its type is defined as 'typedef CCdd_id_set TId'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 464 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Id.

IsSetIds()

bool CReject_id_Base::IsSetIds ( void  ) const

inline

Check if a value has been assigned to Ids data member.

Data member Ids is mandatory; its type is defined as 'typedef list< CRef< CSeq_id > > TIds'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 216 of file Reject_id_.hpp.

References CReject_id_Base::m_set_State.

IsSetIsAnnotated() [1/2]

bool CSeqTree_node_Base::IsSetIsAnnotated ( void  ) const

inline

Check if a value has been assigned to IsAnnotated data member.

Data member IsAnnotated is optional with default false; its type is defined as 'typedef bool TIsAnnotated'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 728 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::SetIsAnnotated().

IsSetIsAnnotated() [2/2]

bool CSequence_tree_Base::IsSetIsAnnotated ( void  ) const

inline

Check if a value has been assigned to IsAnnotated data member.

Data member IsAnnotated is optional with default false; its type is defined as 'typedef bool TIsAnnotated'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 365 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_set_State.

Referenced by CSequence_tree_Base::SetIsAnnotated().

IsSetLeft()

bool CCdd_Viewer_Rect_Base::IsSetLeft ( void  ) const

inline

left coordinate Check if a value has been assigned to Left data member.

Data member Left is mandatory; its type is defined as 'typedef int TLeft'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 329 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::CanGetLeft(), and CCdd_Viewer_Rect_Base::SetLeft().

IsSetLocation() [1/2]

bool CAlign_annot_Base::IsSetLocation ( void  ) const

inline

points to a location in one of the aligned sequences, usually the master/representative Check if a value has been assigned to Location data member.

Data member Location is mandatory; its type is defined as 'typedef CSeq_loc TLocation'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 417 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Location.

IsSetLocation() [2/2]

bool CCdd_repeat_Base::IsSetLocation ( void  ) const

inline

location on the representative Check if a value has been assigned to Location data member.

Data member Location is optional; its type is defined as 'typedef CSeq_loc TLocation'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 290 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_Location.

Referenced by CCdd_repeat_Base::CanGetLocation().

IsSetLog()

bool CCdd_Project_Base::IsSetLog ( void  ) const

inline

log Check if a value has been assigned to Log data member.

Data member Log is mandatory; its type is defined as 'typedef string TLog'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 582 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::CanGetLog(), and CCdd_Project_Base::SetLog().

IsSetMaster3d()

bool CCdd_Base::IsSetMaster3d ( void  ) const

inline

record if CD has a 3D representative Check if a value has been assigned to Master3d data member.

Data member Master3d is optional; its type is defined as 'typedef list< CRef< CSeq_id > > TMaster3d'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1516 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by ASNDataManager::GetCDDMaster3d(), and ReMasterCdWithoutUnifiedBlocks().

IsSetModel_organisms()

bool CCdd_pref_nodes_Base::IsSetModel_organisms ( void  ) const

inline

Check if a value has been assigned to Model_organisms data member.

Data member Model_organisms is optional; its type is defined as 'typedef CCdd_org_ref_set TModel_organisms'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 309 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Model_organisms.

Referenced by CCdd_pref_nodes_Base::CanGetModel_organisms().

IsSetMotif()

bool CAlign_annot_Base::IsSetMotif ( void  ) const

inline

to validate mapping of sites Check if a value has been assigned to Motif data member.

Data member Motif is optional; its type is defined as 'typedef string TMotif'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 591 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::CanGetMotif(), CDDAnnotateDialog::DeleteMotif(), CDDAnnotateDialog::HighlightMotif(), CDDAnnotateDialog::NewOrEditMotif(), CAlign_annot_Base::SetMotif(), and CDDAnnotateDialog::SetupGUIControls().

IsSetMotifuse()

bool CAlign_annot_Base::IsSetMotifuse ( void  ) const

inline

0 for validation, 1 for motif somewhere in seqloc 2 for multiple motifs in seqloc Check if a value has been assigned to Motifuse data member.

Data member Motifuse is optional; its type is defined as 'typedef int TMotifuse'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 638 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::CanGetMotifuse(), and CAlign_annot_Base::SetMotifuse().

IsSetName() [1/4]

bool CCdd_Base::IsSetName ( void  ) const

inline

a short name (can be the accession..) Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1112 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by CCdd_Base::CanGetName(), and CCdd_Base::SetName().

IsSetName() [2/4]

bool CCdd_Script_Base::IsSetName ( void  ) const

inline

user assigned name/description Check if a value has been assigned to Name data member.

Data member Name is optional; its type is defined as 'typedef string TName'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 299 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_set_State.

Referenced by CCdd_Script_Base::CanGetName(), and CCdd_Script_Base::SetName().

IsSetName() [3/4]

bool CCdd_tree_Base::IsSetName ( void  ) const

inline

short name copied from CD Check if a value has been assigned to Name data member.

Data member Name is mandatory; its type is defined as 'typedef string TName'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 417 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_set_State.

Referenced by CCdd_tree_Base::CanGetName(), and CCdd_tree_Base::SetName().

IsSetName() [4/4]

bool CSeqTree_node_Base::IsSetName ( void  ) const

inline

Check if a value has been assigned to Name data member.

Data member Name is optional; its type is defined as 'typedef string TName'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 778 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::CanGetName(), and CSeqTree_node_Base::SetName().

IsSetNcolumns()

bool CMatrix_Base::IsSetNcolumns ( void  ) const

inline

Check if a value has been assigned to Ncolumns data member.

Data member Ncolumns is mandatory; its type is defined as 'typedef int TNcolumns'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 311 of file Matrix_.hpp.

References CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::CanGetNcolumns(), and CMatrix_Base::SetNcolumns().

IsSetNeighbors() [1/2]

bool CCdd_Base::IsSetNeighbors ( void  ) const

inline

co-occurring CDs, not used Check if a value has been assigned to Neighbors data member.

Data member Neighbors is optional; its type is defined as 'typedef CCdd_id_set TNeighbors'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1445 of file Cdd_.hpp.

References CCdd_Base::m_Neighbors.

Referenced by CCdd_Base::CanGetNeighbors().

IsSetNeighbors() [2/2]

bool CCdd_tree_Base::IsSetNeighbors ( void  ) const

inline

co-occurring CDs (non-overlapping hits to same sequences) Check if a value has been assigned to Neighbors data member.

Data member Neighbors is optional; its type is defined as 'typedef CCdd_id_set TNeighbors'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 578 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Neighbors.

Referenced by CCdd_tree_Base::CanGetNeighbors().

IsSetNelements()

bool CTriangle_Base::IsSetNelements ( void  ) const

inline

Check if a value has been assigned to Nelements data member.

Data member Nelements is mandatory; its type is defined as 'typedef int TNelements'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 240 of file Triangle_.hpp.

References CTriangle_Base::m_set_State.

Referenced by CTriangle_Base::CanGetNelements(), and CTriangle_Base::SetNelements().

IsSetNote()

bool CNode_annotation_Base::IsSetNote ( void  ) const

inline

Check if a value has been assigned to Note data member.

Data member Note is optional; its type is defined as 'typedef string TNote'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 247 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_set_State.

Referenced by CNode_annotation_Base::CanGetNote(), and CNode_annotation_Base::SetNote().

IsSetNrows()

bool CMatrix_Base::IsSetNrows ( void  ) const

inline

Check if a value has been assigned to Nrows data member.

Data member Nrows is mandatory; its type is defined as 'typedef int TNrows'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 358 of file Matrix_.hpp.

References CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::CanGetNrows(), and CMatrix_Base::SetNrows().

IsSetNTerminalExt()

bool CAlgorithm_type_Base::IsSetNTerminalExt ( void  ) const

inline

Check if a value has been assigned to NTerminalExt data member.

Data member NTerminalExt is optional; its type is defined as 'typedef int TNTerminalExt'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 856 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetNTerminalExt(), and CAlgorithm_type_Base::SetNTerminalExt().

IsSetOptional_nodes()

bool CCdd_pref_nodes_Base::IsSetOptional_nodes ( void  ) const

inline

Check if a value has been assigned to Optional_nodes data member.

Data member Optional_nodes is optional; its type is defined as 'typedef CCdd_org_ref_set TOptional_nodes'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 330 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Optional_nodes.

Referenced by CCdd_pref_nodes_Base::CanGetOptional_nodes().

IsSetParent() [1/2]

bool CCdd_Base::IsSetParent ( void  ) const

inline

this CD is the result of a split Check if a value has been assigned to Parent data member.

Data member Parent is optional; its type is defined as 'typedef CCdd_id TParent'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1382 of file Cdd_.hpp.

References CCdd_Base::m_Parent.

Referenced by CCdd_Base::CanGetParent(), CCdCore::HasParentType(), and obeysParentTypeConstraints().

IsSetParent() [2/2]

bool CCdd_tree_Base::IsSetParent ( void  ) const

inline

CD is the result of a split/merge Check if a value has been assigned to Parent data member.

Data member Parent is optional; its type is defined as 'typedef CCdd_id TParent'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 515 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Parent.

Referenced by CCdd_tree_Base::CanGetParent().

IsSetParent_tax_id()

bool CCdd_org_ref_Base::IsSetParent_tax_id ( void  ) const

inline

Check if a value has been assigned to Parent_tax_id data member.

Data member Parent_tax_id is optional; its type is defined as 'typedef int TParent_tax_id'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 367 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::CanGetParent_tax_id(), and CCdd_org_ref_Base::SetParent_tax_id().

IsSetParent_type()

bool CDomain_parent_Base::IsSetParent_type ( void  ) const

inline

Check if a value has been assigned to Parent_type data member.

Data member Parent_type is mandatory; its type is defined as 'typedef int TParent_type'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 269 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_set_State.

Referenced by CDomain_parent_Base::CanGetParent_type(), and CDomain_parent_Base::SetParent_type().

IsSetParentid()

bool CDomain_parent_Base::IsSetParentid ( void  ) const

inline

identify the section parent by accession Check if a value has been assigned to Parentid data member.

Data member Parentid is mandatory; its type is defined as 'typedef CCdd_id TParentid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 316 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Parentid.

IsSetPending()

bool CCdd_Base::IsSetPending ( void  ) const

inline

contains alignments from update or "lower panel" Check if a value has been assigned to Pending data member.

Data member Pending is optional; its type is defined as 'typedef list< CRef< CUpdate_align > > TPending'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1466 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by AlignmentCollection::addPendingAlignment().

IsSetPosfreq()

bool CCdd_Base::IsSetPosfreq ( void  ) const

inline

relative residue frequencies Check if a value has been assigned to Posfreq data member.

Data member Posfreq is optional; its type is defined as 'typedef CMatrix TPosfreq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1319 of file Cdd_.hpp.

References CCdd_Base::m_Posfreq.

Referenced by CCdd_Base::CanGetPosfreq().

IsSetPreferred_nodes()

bool CCdd_pref_nodes_Base::IsSetPreferred_nodes ( void  ) const

inline

Check if a value has been assigned to Preferred_nodes data member.

Data member Preferred_nodes is mandatory; its type is defined as 'typedef CCdd_org_ref_set TPreferred_nodes'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 279 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Preferred_nodes.

IsSetPresentInChildCD()

bool CNode_annotation_Base::IsSetPresentInChildCD ( void  ) const

inline

Check if a value has been assigned to PresentInChildCD data member.

Data member PresentInChildCD is optional; its type is defined as 'typedef string TPresentInChildCD'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 200 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_set_State.

Referenced by CNode_annotation_Base::CanGetPresentInChildCD(), and CNode_annotation_Base::SetPresentInChildCD().

IsSetProfile_range()

bool CCdd_Base::IsSetProfile_range ( void  ) const

inline

profile for this region only also stores the Seq-id of the master Check if a value has been assigned to Profile_range data member.

Data member Profile_range is optional; its type is defined as 'typedef CSeq_interval TProfile_range'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1277 of file Cdd_.hpp.

References CCdd_Base::m_Profile_range.

Referenced by CCdd_Base::CanGetProfile_range().

IsSetProject_id()

bool CCdd_Project_Base::IsSetProject_id ( void  ) const

inline

for temporary tracking in the database Check if a value has been assigned to Project_id data member.

Data member Project_id is optional; its type is defined as 'typedef int TProject_id'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 742 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::CanGetProject_id(), and CCdd_Project_Base::SetProject_id().

IsSetRank()

bool CCdd_org_ref_Base::IsSetRank ( void  ) const

inline

Check if a value has been assigned to Rank data member.

Data member Rank is optional; its type is defined as 'typedef string TRank'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 414 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::CanGetRank(), and CCdd_org_ref_Base::SetRank().

IsSetRect()

bool CCdd_Viewer_Base::IsSetRect ( void  ) const

inline

viewer rectangle Check if a value has been assigned to Rect data member.

Data member Rect is optional; its type is defined as 'typedef CCdd_Viewer_Rect TRect'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 305 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_Rect.

Referenced by CCdd_Viewer_Base::CanGetRect().

IsSetReference()

bool CCdd_org_ref_Base::IsSetReference ( void  ) const

inline

Check if a value has been assigned to Reference data member.

Data member Reference is mandatory; its type is defined as 'typedef COrg_ref TReference'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 287 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Reference.

IsSetRejects()

bool CCdd_Base::IsSetRejects ( void  ) const

inline

SeqIds of rejected CD- members, ignore in update Check if a value has been assigned to Rejects data member.

Data member Rejects is optional; its type is defined as 'typedef list< CRef< CReject_id > > TRejects'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1491 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by ASNDataManager::GetRejects().

IsSetRelease()

bool CGlobal_id_Base::IsSetRelease ( void  ) const

inline

to hold CD-Database release number if desired, currently not used Check if a value has been assigned to Release data member.

Data member Release is optional; its type is defined as 'typedef string TRelease'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 341 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::CanGetRelease(), and CGlobal_id_Base::SetRelease().

IsSetRids()

bool CCdd_Project_Base::IsSetRids ( void  ) const

inline

to store request IDs for batch CD-Searches Check if a value has been assigned to Rids data member.

Data member Rids is optional; its type is defined as 'typedef list< string > TRids'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 675 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

IsSetRoot()

bool CSequence_tree_Base::IsSetRoot ( void  ) const

inline

Check if a value has been assigned to Root data member.

Data member Root is mandatory; its type is defined as 'typedef CSeqTree_node TRoot'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 415 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Root.

Referenced by SeqTreeAsnizer::convertToSeqTree().

IsSetRow_labels()

bool CMatrix_Base::IsSetRow_labels ( void  ) const

inline

Check if a value has been assigned to Row_labels data member.

Data member Row_labels is optional; its type is defined as 'typedef list< string > TRow_labels'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 405 of file Matrix_.hpp.

References CMatrix_Base::m_set_State.

IsSetRowId()

bool CSeqTree_node_Base::C_Children::C_Footprint::IsSetRowId ( void  ) const

inline

Check if a value has been assigned to RowId data member.

Data member RowId is optional; its type is defined as 'typedef int TRowId'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 626 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State.

Referenced by SeqTreeAsnizer::fillSeqItem().

IsSetScale_factor()

bool CMatrix_Base::IsSetScale_factor ( void  ) const

inline

Check if a value has been assigned to Scale_factor data member.

Data member Scale_factor is mandatory; its type is defined as 'typedef int TScale_factor'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 430 of file Matrix_.hpp.

References CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::CanGetScale_factor(), and CMatrix_Base::SetScale_factor().

IsSetScore_Matrix()

bool CAlgorithm_type_Base::IsSetScore_Matrix ( void  ) const

inline

Check if a value has been assigned to Score_Matrix data member.

Data member Score_Matrix is optional; its type is defined as 'typedef int TScore_Matrix'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 668 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetScore_Matrix(), and CAlgorithm_type_Base::SetScore_Matrix().

IsSetScoremat()

bool CCdd_Base::IsSetScoremat ( void  ) const

inline

Position dependent score matrix Check if a value has been assigned to Scoremat data member.

Data member Scoremat is optional; its type is defined as 'typedef CMatrix TScoremat'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1340 of file Cdd_.hpp.

References CCdd_Base::m_Scoremat.

Referenced by CCdd_Base::CanGetScoremat().

IsSetScoreparams()

bool CCdd_Base::IsSetScoreparams ( void  ) const

inline

Check if a value has been assigned to Scoreparams data member.

Data member Scoreparams is optional; its type is defined as 'typedef CPssmWithParameters TScoreparams'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1629 of file Cdd_.hpp.

References CCdd_Base::m_Scoreparams.

Referenced by CCdd_Base::CanGetScoreparams().

IsSetScores()

bool CTriangle_Base::IsSetScores ( void  ) const

inline

Check if a value has been assigned to Scores data member.

Data member Scores is optional; its type is defined as 'typedef CScore_set TScores'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 287 of file Triangle_.hpp.

References CTriangle_Base::m_Scores.

Referenced by CTriangle_Base::CanGetScores().

IsSetScoring_Scheme()

bool CAlgorithm_type_Base::IsSetScoring_Scheme ( void  ) const

inline

Check if a value has been assigned to Scoring_Scheme data member.

Data member Scoring_Scheme is mandatory; its type is defined as 'typedef int TScoring_Scheme'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 574 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetScoring_Scheme(), and CAlgorithm_type_Base::SetScoring_Scheme().

IsSetScripts()

bool CCdd_Project_Base::IsSetScripts ( void  ) const

inline

command scripts Check if a value has been assigned to Scripts data member.

Data member Scripts is optional; its type is defined as 'typedef list< CRef< CCdd_Script > > TScripts'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 629 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

IsSetSeqannot() [1/3]

bool CCdd_Base::IsSetSeqannot ( void  ) const

inline

contains the CD alignment Check if a value has been assigned to Seqannot data member.

Data member Seqannot is optional; its type is defined as 'typedef list< CRef< CSeq_annot > > TSeqannot'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1210 of file Cdd_.hpp.

References CCdd_Base::m_set_State.

Referenced by CCdCore::GetAlignment(), CCdCore::Has3DMaster(), CCdCore::IsSeqAligns(), and CCdCore::Num3DAlignments().

IsSetSeqannot() [2/3]

bool CDomain_parent_Base::IsSetSeqannot ( void  ) const

inline

contains the sequence alignment linking CD alignment models, should align the masters/representatives of each CD Check if a value has been assigned to Seqannot data member.

Data member Seqannot is optional; its type is defined as 'typedef CSeq_annot TSeqannot'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 346 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Seqannot.

Referenced by CDomain_parent_Base::CanGetSeqannot().

IsSetSeqannot() [3/3]

bool CUpdate_align_Base::IsSetSeqannot ( void  ) const

inline

contains the SeqAlign Check if a value has been assigned to Seqannot data member.

Data member Seqannot is optional; its type is defined as 'typedef CSeq_annot TSeqannot'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 278 of file Update_align_.hpp.

References CUpdate_align_Base::m_Seqannot.

Referenced by CUpdate_align_Base::CanGetSeqannot(), and UpdateViewer::SaveAlignments().

IsSetSeqRange()

bool CSeqTree_node_Base::C_Children::C_Footprint::IsSetSeqRange ( void  ) const

inline

Check if a value has been assigned to SeqRange data member.

Data member SeqRange is mandatory; its type is defined as 'typedef CSeq_interval TSeqRange'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 596 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::C_Footprint::m_SeqRange.

IsSetSeqtree()

bool CCdd_Base::IsSetSeqtree ( void  ) const

inline

Check if a value has been assigned to Seqtree data member.

Data member Seqtree is optional; its type is defined as 'typedef CSequence_tree TSeqtree'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1650 of file Cdd_.hpp.

References CCdd_Base::m_Seqtree.

Referenced by CCdd_Base::CanGetSeqtree(), SeqTreeAPI::loadAndValidateExistingTree(), and SeqTreeAPI::loadExistingTree().

IsSetSequences()

bool CCdd_Base::IsSetSequences ( void  ) const

inline

store as bioseq-set inside seq-entry Check if a value has been assigned to Sequences data member.

Data member Sequences is optional; its type is defined as 'typedef CSeq_entry TSequences'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1256 of file Cdd_.hpp.

References CCdd_Base::m_Sequences.

Referenced by CCdd_Base::CanGetSequences(), CCdCore::CopyBioseqForSeqId(), CCdCore::EraseSequence(), CCdCore::GetBioseqForIndex(), CCdCore::GetBioseqWithSeqId(), CCdCore::GetDefline(), CCdCore::GetGIFromSequenceList(), CCdCore::GetMmdbId(), CCdCore::GetNumSequences(), CCdCore::GetSeqEntryForIndex(), CCdCore::GetSeqEntryForRow(), CCdCore::GetSeqIDForIndex(), CCdCore::GetSeqIDs(), and CCdCore::GetSeqIndex().

IsSetSiblings() [1/2]

bool CCdd_Base::IsSetSiblings ( void  ) const

inline

related CDs (common hits), clusters Check if a value has been assigned to Siblings data member.

Data member Siblings is optional; its type is defined as 'typedef CCdd_id_set TSiblings'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1424 of file Cdd_.hpp.

References CCdd_Base::m_Siblings.

Referenced by CCdd_Base::CanGetSiblings().

IsSetSiblings() [2/2]

bool CCdd_tree_Base::IsSetSiblings ( void  ) const

inline

related CDs (have common hits) Check if a value has been assigned to Siblings data member.

Data member Siblings is optional; its type is defined as 'typedef CCdd_id_set TSiblings'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 557 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Siblings.

Referenced by CCdd_tree_Base::CanGetSiblings().

IsSetStyle_dictionary()

bool CCdd_Base::IsSetStyle_dictionary ( void  ) const

inline

record rendering styles Check if a value has been assigned to Style_dictionary data member.

Data member Style_dictionary is optional; its type is defined as 'typedef CCn3d_style_dictionary TStyle_dictionary'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1562 of file Cdd_.hpp.

References CCdd_Base::m_Style_dictionary.

Referenced by CCdd_Base::CanGetStyle_dictionary().

IsSetSubelementid()

bool CCdd_book_ref_Base::IsSetSubelementid ( void  ) const

inline

exact address, used with section Check if a value has been assigned to Subelementid data member.

Data member Subelementid is optional; its type is defined as 'typedef int TSubelementid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 524 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetSubelementid(), CCddBookRefToBrString(), CCddBookRefToBvString(), MakeBrParameterString(), CCdd_book_ref_Base::SetSubelementid(), and CDDBookRefDialog::SetWidgetStates().

IsSetTextelement()

bool CCdd_book_ref_Base::IsSetTextelement ( void  ) const

inline

Check if a value has been assigned to Textelement data member.

Data member Textelement is mandatory; its type is defined as 'typedef ETextelement TTextelement'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 430 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::CanGetTextelement(), and CCdd_book_ref_Base::SetTextelement().

IsSetTop()

bool CCdd_Viewer_Rect_Base::IsSetTop ( void  ) const

inline

top coordinate Check if a value has been assigned to Top data member.

Data member Top is mandatory; its type is defined as 'typedef int TTop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 282 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::CanGetTop(), and CCdd_Viewer_Rect_Base::SetTop().

IsSetTree_scope()

bool CAlgorithm_type_Base::IsSetTree_scope ( void  ) const

inline

Check if a value has been assigned to Tree_scope data member.

Data member Tree_scope is optional; its type is defined as 'typedef int TTree_scope'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 950 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::CanGetTree_scope(), and CAlgorithm_type_Base::SetTree_scope().

IsSetTrunc_master()

bool CCdd_Base::IsSetTrunc_master ( void  ) const

inline

holds the truncated master, which may be something like a consensus, uses the same sequence coordinate frame as the profile-range Check if a value has been assigned to Trunc_master data member.

Data member Trunc_master is optional; its type is defined as 'typedef CBioseq TTrunc_master'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1298 of file Cdd_.hpp.

References CCdd_Base::m_Trunc_master.

Referenced by CCdd_Base::CanGetTrunc_master().

IsSetType() [1/3]

bool CAlign_annot_Base::IsSetType ( void  ) const

inline

for typing annotated features 0 .

. no type assigned 1 .. active site 2 .. polypeptide binding site 3 .. nucleic acid binding site 4 .. ion binding site 5 .. chemical binding site 6 .. posttranslational modification site 7 .. structural motif Check if a value has been assigned to Type data member.

Data member Type is optional; its type is defined as 'typedef int TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 519 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::CanGetType(), CDDAnnotateDialog::EditAnnotation(), CAlign_annot_Base::SetType(), and IBISAnnotateDialog::SetupGUIControls().

IsSetType() [2/3]

bool CCdd_Script_Base::IsSetType ( void  ) const

inline

Check if a value has been assigned to Type data member.

Data member Type is optional; its type is defined as 'typedef int TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 252 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_set_State.

Referenced by CCdd_Script_Base::CanGetType(), and CCdd_Script_Base::SetType().

IsSetType() [3/3]

bool CUpdate_align_Base::IsSetType ( void  ) const

inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef int TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 299 of file Update_align_.hpp.

References CUpdate_align_Base::m_set_State.

Referenced by CUpdate_align_Base::CanGetType(), and CUpdate_align_Base::SetType().

IsSetUpdate_date()

bool CCdd_Project_Base::IsSetUpdate_date ( void  ) const

inline

Check if a value has been assigned to Update_date data member.

Data member Update_date is optional; its type is defined as 'typedef CDate TUpdate_date'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 721 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Update_date.

Referenced by CCdd_Project_Base::CanGetUpdate_date().

IsSetUser_annotations()

bool CCdd_Base::IsSetUser_annotations ( void  ) const

inline

user annotations in Cn3D Check if a value has been assigned to User_annotations data member.

Data member User_annotations is optional; its type is defined as 'typedef CCn3d_user_annotations TUser_annotations'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1583 of file Cdd_.hpp.

References CCdd_Base::m_User_annotations.

Referenced by CCdd_Base::CanGetUser_annotations().

IsSetVersion()

bool CGlobal_id_Base::IsSetVersion ( void  ) const

inline

version 0 is the seed, version numbers increase with update/curate cycles Check if a value has been assigned to Version data member.

Data member Version is optional; its type is defined as 'typedef int TVersion'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 388 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::CanGetVersion(), CCdCore::GetClassicalParentAccession(), and CGlobal_id_Base::SetVersion().

IsSetViewers()

bool CCdd_Project_Base::IsSetViewers ( void  ) const

inline

Sequence viewers Check if a value has been assigned to Viewers data member.

Data member Viewers is mandatory; its type is defined as 'typedef list< CRef< CCdd_Viewer > > TViewers'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 557 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State.

IsSetWidth()

bool CCdd_Viewer_Rect_Base::IsSetWidth ( void  ) const

inline

width Check if a value has been assigned to Width data member.

Data member Width is mandatory; its type is defined as 'typedef int TWidth'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 376 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::CanGetWidth(), and CCdd_Viewer_Rect_Base::SetWidth().

IsSource()

bool CCdd_descr_Base::IsSource ( void  ) const

inline

Check if variant Source is selected.

Source type is defined as 'typedef string TSource'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 851 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Source, and CCdd_descr_Base::m_choice.

IsSource_id()

bool CCdd_descr_Base::IsSource_id ( void  ) const

inline

Check if variant Source_id is selected.

Source_id type is defined as 'typedef CCdd_id_set TSource_id'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 924 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Source_id, and CCdd_descr_Base::m_choice.

IsStatus()

bool CCdd_descr_Base::IsStatus ( void  ) const

inline

Check if variant Status is selected.

Status type is defined as 'typedef int TStatus'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 871 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Status, and CCdd_descr_Base::m_choice.

IsTax_source()

bool CCdd_descr_Base::IsTax_source ( void  ) const

inline

Check if variant Tax_source is selected.

Tax_source type is defined as 'typedef COrg_ref TTax_source'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 845 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Tax_source, and CCdd_descr_Base::m_choice.

IsTitle()

bool CCdd_descr_Base::IsTitle ( void  ) const

inline

Check if variant Title is selected.

Title type is defined as 'typedef string TTitle'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 1008 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Title, and CCdd_descr_Base::m_choice.

IsUid()

bool CCdd_id_Base::IsUid ( void  ) const

inline

Check if variant Uid is selected.

Uid type is defined as 'typedef int TUid'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 260 of file Cdd_id_.hpp.

References CCdd_id_Base::e_Uid, and CCdd_id_Base::m_choice.

IsUpdate_date()

bool CCdd_descr_Base::IsUpdate_date ( void  ) const

inline

Check if variant Update_date is selected.

Update_date type is defined as 'typedef CDate TUpdate_date'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 898 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Update_date, and CCdd_descr_Base::m_choice.

operator const Tdata &() [1/7]

CAlign_annot_set_Base::operator const CAlign_annot_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Align_annot_set_.hpp.

operator const Tdata &() [2/7]

CCdd_descr_set_Base::operator const CCdd_descr_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_descr_set_.hpp.

operator const Tdata &() [3/7]

CCdd_id_set_Base::operator const CCdd_id_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_id_set_.hpp.

operator const Tdata &() [4/7]

CCdd_org_ref_set_Base::operator const CCdd_org_ref_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_org_ref_set_.hpp.

operator const Tdata &() [5/7]

CCdd_pref_node_descr_set_Base::operator const CCdd_pref_node_descr_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_pref_node_descr_set_.hpp.

operator const Tdata &() [6/7]

CCdd_set_Base::operator const CCdd_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_set_.hpp.

operator const Tdata &() [7/7]

CCdd_tree_set_Base::operator const CCdd_tree_set_Base::Tdata & ( void  ) const

inline

Conversion operator to 'const Tdata' type.

Definition at line 177 of file Cdd_tree_set_.hpp.

operator Tdata &() [1/7]

CAlign_annot_set_Base::operator CAlign_annot_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Align_annot_set_.hpp.

operator Tdata &() [2/7]

CCdd_descr_set_Base::operator CCdd_descr_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_descr_set_.hpp.

operator Tdata &() [3/7]

CCdd_id_set_Base::operator CCdd_id_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_id_set_.hpp.

operator Tdata &() [4/7]

CCdd_org_ref_set_Base::operator CCdd_org_ref_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_org_ref_set_.hpp.

operator Tdata &() [5/7]

CCdd_pref_node_descr_set_Base::operator CCdd_pref_node_descr_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_pref_node_descr_set_.hpp.

operator Tdata &() [6/7]

CCdd_set_Base::operator CCdd_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_set_.hpp.

operator Tdata &() [7/7]

CCdd_tree_set_Base::operator CCdd_tree_set_Base::Tdata & ( void  )

inline

Conversion operator to 'Tdata' type.

Definition at line 183 of file Cdd_tree_set_.hpp.

operator=() [1/67]

C_Children& CSeqTree_node_Base::C_Children::operator= ( const C_Children &  )

private

operator=() [2/67]

C_Footprint& CSeqTree_node_Base::C_Children::C_Footprint::operator= ( const C_Footprint &  )

private

operator=() [3/67]

CAlgorithm_type& CAlgorithm_type::operator= ( const CAlgorithm_type &  value )

private

operator=() [4/67]

CAlgorithm_type_Base& CAlgorithm_type_Base::operator= ( const CAlgorithm_type_Base &  )

private

operator=() [5/67]

CAlign_annot& CAlign_annot::operator= ( const CAlign_annot &  value )

private

operator=() [6/67]

CAlign_annot_Base& CAlign_annot_Base::operator= ( const CAlign_annot_Base &  )

private

operator=() [7/67]

CAlign_annot_set& CAlign_annot_set::operator= ( const CAlign_annot_set &  value )

private

operator=() [8/67]

CAlign_annot_set_Base& CAlign_annot_set_Base::operator= ( const CAlign_annot_set_Base &  )

private

operator=() [9/67]

CCdd_Base& CCdd_Base::operator= ( const CCdd_Base &  )

private

operator=() [10/67]

CCdd_book_ref& CCdd_book_ref::operator= ( const CCdd_book_ref &  value )

private

operator=() [11/67]

CCdd_book_ref_Base& CCdd_book_ref_Base::operator= ( const CCdd_book_ref_Base &  )

private

operator=() [12/67]

CCdd_descr& CCdd_descr::operator= ( const CCdd_descr &  value )

private

operator=() [13/67]

CCdd_descr_Base& CCdd_descr_Base::operator= ( const CCdd_descr_Base &  )

private

operator=() [14/67]

CCdd_descr_set& CCdd_descr_set::operator= ( const CCdd_descr_set &  value )

private

operator=() [15/67]

CCdd_descr_set_Base& CCdd_descr_set_Base::operator= ( const CCdd_descr_set_Base &  )

private

operator=() [16/67]

CCdd_id& CCdd_id::operator= ( const CCdd_id &  value )

private

operator=() [17/67]

CCdd_id_Base& CCdd_id_Base::operator= ( const CCdd_id_Base &  )

private

operator=() [18/67]

CCdd_id_set& CCdd_id_set::operator= ( const CCdd_id_set &  value )

private

operator=() [19/67]

CCdd_id_set_Base& CCdd_id_set_Base::operator= ( const CCdd_id_set_Base &  )

private

operator=() [20/67]

CCdd_org_ref& CCdd_org_ref::operator= ( const CCdd_org_ref &  value )

private

operator=() [21/67]

CCdd_org_ref_Base& CCdd_org_ref_Base::operator= ( const CCdd_org_ref_Base &  )

private

operator=() [22/67]

CCdd_org_ref_set& CCdd_org_ref_set::operator= ( const CCdd_org_ref_set &  value )

private

operator=() [23/67]

CCdd_org_ref_set_Base& CCdd_org_ref_set_Base::operator= ( const CCdd_org_ref_set_Base &  )

private

operator=() [24/67]

CCdd_pref_node_descr& CCdd_pref_node_descr::operator= ( const CCdd_pref_node_descr &  value )

private

operator=() [25/67]

CCdd_pref_node_descr_Base& CCdd_pref_node_descr_Base::operator= ( const CCdd_pref_node_descr_Base &  )

private

operator=() [26/67]

CCdd_pref_node_descr_set& CCdd_pref_node_descr_set::operator= ( const CCdd_pref_node_descr_set &  value )

private

operator=() [27/67]

CCdd_pref_node_descr_set_Base& CCdd_pref_node_descr_set_Base::operator= ( const CCdd_pref_node_descr_set_Base &  )

private

operator=() [28/67]

CCdd_pref_nodes& CCdd_pref_nodes::operator= ( const CCdd_pref_nodes &  value )

private

operator=() [29/67]

CCdd_pref_nodes_Base& CCdd_pref_nodes_Base::operator= ( const CCdd_pref_nodes_Base &  )

private

operator=() [30/67]

CCdd_Project& CCdd_Project::operator= ( const CCdd_Project &  value )

private

operator=() [31/67]

CCdd_Project_Base& CCdd_Project_Base::operator= ( const CCdd_Project_Base &  )

private

operator=() [32/67]

CCdd_repeat& CCdd_repeat::operator= ( const CCdd_repeat &  value )

private

operator=() [33/67]

CCdd_repeat_Base& CCdd_repeat_Base::operator= ( const CCdd_repeat_Base &  )

private

operator=() [34/67]

CCdd_Script& CCdd_Script::operator= ( const CCdd_Script &  value )

private

operator=() [35/67]

CCdd_Script_Base& CCdd_Script_Base::operator= ( const CCdd_Script_Base &  )

private

operator=() [36/67]

CCdd_set& CCdd_set::operator= ( const CCdd_set &  value )

private

operator=() [37/67]

CCdd_set_Base& CCdd_set_Base::operator= ( const CCdd_set_Base &  )

private

operator=() [38/67]

CCdd_tree& CCdd_tree::operator= ( const CCdd_tree &  value )

private

operator=() [39/67]

CCdd_tree_Base& CCdd_tree_Base::operator= ( const CCdd_tree_Base &  )

private

operator=() [40/67]

CCdd_tree_set& CCdd_tree_set::operator= ( const CCdd_tree_set &  value )

private

operator=() [41/67]

CCdd_tree_set_Base& CCdd_tree_set_Base::operator= ( const CCdd_tree_set_Base &  )

private

operator=() [42/67]

CCdd_Viewer& CCdd_Viewer::operator= ( const CCdd_Viewer &  value )

private

operator=() [43/67]

CCdd_Viewer_Base& CCdd_Viewer_Base::operator= ( const CCdd_Viewer_Base &  )

private

operator=() [44/67]

CCdd_Viewer_Rect& CCdd_Viewer_Rect::operator= ( const CCdd_Viewer_Rect &  value )

private

operator=() [45/67]

CCdd_Viewer_Rect_Base& CCdd_Viewer_Rect_Base::operator= ( const CCdd_Viewer_Rect_Base &  )

private

operator=() [46/67]

CDomain_parent& CDomain_parent::operator= ( const CDomain_parent &  value )

private

operator=() [47/67]

CDomain_parent_Base& CDomain_parent_Base::operator= ( const CDomain_parent_Base &  )

private

operator=() [48/67]

CFeature_evidence& CFeature_evidence::operator= ( const CFeature_evidence &  value )

private

operator=() [49/67]

CFeature_evidence_Base& CFeature_evidence_Base::operator= ( const CFeature_evidence_Base &  )

private

operator=() [50/67]

CGlobal_id& CGlobal_id::operator= ( const CGlobal_id &  value )

private

operator=() [51/67]

CGlobal_id_Base& CGlobal_id_Base::operator= ( const CGlobal_id_Base &  )

private

operator=() [52/67]

CMatrix& CMatrix::operator= ( const CMatrix &  value )

private

operator=() [53/67]

CMatrix_Base& CMatrix_Base::operator= ( const CMatrix_Base &  )

private

operator=() [54/67]

CNode_annotation& CNode_annotation::operator= ( const CNode_annotation &  value )

private

operator=() [55/67]

CNode_annotation_Base& CNode_annotation_Base::operator= ( const CNode_annotation_Base &  )

private

operator=() [56/67]

CReject_id& CReject_id::operator= ( const CReject_id &  value )

private

operator=() [57/67]

CReject_id_Base& CReject_id_Base::operator= ( const CReject_id_Base &  )

private

operator=() [58/67]

CSeqTree_node& CSeqTree_node::operator= ( const CSeqTree_node &  value )

private

operator=() [59/67]

CSeqTree_node_Base& CSeqTree_node_Base::operator= ( const CSeqTree_node_Base &  )

private

operator=() [60/67]

CSequence_tree& CSequence_tree::operator= ( const CSequence_tree &  value )

private

operator=() [61/67]

CSequence_tree_Base& CSequence_tree_Base::operator= ( const CSequence_tree_Base &  )

private

operator=() [62/67]

CTriangle& CTriangle::operator= ( const CTriangle &  value )

private

operator=() [63/67]

CTriangle_Base& CTriangle_Base::operator= ( const CTriangle_Base &  )

private

operator=() [64/67]

CUpdate_align& CUpdate_align::operator= ( const CUpdate_align &  value )

private

operator=() [65/67]

CUpdate_align_Base& CUpdate_align_Base::operator= ( const CUpdate_align_Base &  )

private

operator=() [66/67]

CUpdate_comment& CUpdate_comment::operator= ( const CUpdate_comment &  value )

private

operator=() [67/67]

CUpdate_comment_Base& CUpdate_comment_Base::operator= ( const CUpdate_comment_Base &  )

private

Reset() [1/35]

END_ENUM_INFO void CAlgorithm_type_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 115 of file Algorithm_type_.cpp.

References CAlgorithm_type_Base::ResetClustering_Method(), CAlgorithm_type_Base::ResetColoring_scope(), CAlgorithm_type_Base::ResetCTerminalExt(), CAlgorithm_type_Base::ResetGapExtend(), CAlgorithm_type_Base::ResetGapOpen(), CAlgorithm_type_Base::ResetGapScaleFactor(), CAlgorithm_type_Base::ResetNTerminalExt(), CAlgorithm_type_Base::ResetScore_Matrix(), CAlgorithm_type_Base::ResetScoring_Scheme(), and CAlgorithm_type_Base::ResetTree_scope().

Reset() [2/35]

void CAlign_annot_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 90 of file Align_annot_.cpp.

References CAlign_annot_Base::ResetAliases(), CAlign_annot_Base::ResetDescription(), CAlign_annot_Base::ResetEvidence(), CAlign_annot_Base::ResetLocation(), CAlign_annot_Base::ResetMotif(), CAlign_annot_Base::ResetMotifuse(), and CAlign_annot_Base::ResetType().

Reset() [3/35]

void CAlign_annot_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Align_annot_set_.cpp.

References CAlign_annot_set_Base::m_data, and CAlign_annot_set_Base::m_set_State.

Reset() [4/35]

void CCdd_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 408 of file Cdd_.cpp.

References CCdd_Base::ResetAlignannot(), CCdd_Base::ResetAncestors(), CCdd_Base::ResetChildren(), CCdd_Base::ResetDescription(), CCdd_Base::ResetDistance(), CCdd_Base::ResetFeatures(), CCdd_Base::ResetId(), CCdd_Base::ResetMaster3d(), CCdd_Base::ResetName(), CCdd_Base::ResetNeighbors(), CCdd_Base::ResetParent(), CCdd_Base::ResetPending(), CCdd_Base::ResetPosfreq(), CCdd_Base::ResetProfile_range(), CCdd_Base::ResetRejects(), CCdd_Base::ResetScoremat(), CCdd_Base::ResetScoreparams(), CCdd_Base::ResetSeqannot(), CCdd_Base::ResetSeqtree(), CCdd_Base::ResetSequences(), CCdd_Base::ResetSiblings(), CCdd_Base::ResetStyle_dictionary(), CCdd_Base::ResetTrunc_master(), and CCdd_Base::ResetUser_annotations().

Reset() [5/35]

void CCdd_book_ref_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 85 of file Cdd_book_ref_.cpp.

References CCdd_book_ref_Base::ResetBookname(), CCdd_book_ref_Base::ResetCelementid(), CCdd_book_ref_Base::ResetCsubelementid(), CCdd_book_ref_Base::ResetElementid(), CCdd_book_ref_Base::ResetSubelementid(), and CCdd_book_ref_Base::ResetTextelement().

Reset() [6/35]

END_ENUM_INFO void CCdd_descr_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 101 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_not_set, CCdd_descr_Base::m_choice, and CCdd_descr_Base::ResetSelection().

Referenced by CCdd_descr_Base::~CCdd_descr_Base().

Reset() [7/35]

void CCdd_descr_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_descr_set_.cpp.

References CCdd_descr_set_Base::m_data, and CCdd_descr_set_Base::m_set_State.

Reset() [8/35]

void CCdd_id_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 51 of file Cdd_id_.cpp.

References CCdd_id_Base::e_not_set, CCdd_id_Base::m_choice, and CCdd_id_Base::ResetSelection().

Referenced by CCdd_id_Base::~CCdd_id_Base().

Reset() [9/35]

void CCdd_id_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_id_set_.cpp.

References CCdd_id_set_Base::m_data, and CCdd_id_set_Base::m_set_State.

Reset() [10/35]

void CCdd_org_ref_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file Cdd_org_ref_.cpp.

References CCdd_org_ref_Base::ResetActive(), CCdd_org_ref_Base::ResetParent_tax_id(), CCdd_org_ref_Base::ResetRank(), and CCdd_org_ref_Base::ResetReference().

Reset() [11/35]

void CCdd_org_ref_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_org_ref_set_.cpp.

References CCdd_org_ref_set_Base::m_data, and CCdd_org_ref_set_Base::m_set_State.

Reset() [12/35]

void CCdd_pref_node_descr_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 51 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::e_not_set, CCdd_pref_node_descr_Base::m_choice, and CCdd_pref_node_descr_Base::ResetSelection().

Referenced by CCdd_pref_node_descr_Base::~CCdd_pref_node_descr_Base().

Reset() [13/35]

void CCdd_pref_node_descr_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_pref_node_descr_set_.cpp.

References CCdd_pref_node_descr_set_Base::m_data, and CCdd_pref_node_descr_set_Base::m_set_State.

Reset() [14/35]

void CCdd_pref_nodes_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 117 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::ResetDescription(), CCdd_pref_nodes_Base::ResetModel_organisms(), CCdd_pref_nodes_Base::ResetOptional_nodes(), and CCdd_pref_nodes_Base::ResetPreferred_nodes().

Reset() [15/35]

void CCdd_Project_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 142 of file Cdd_Project_.cpp.

References CCdd_Project_Base::ResetCdcolor(), CCdd_Project_Base::ResetCds(), CCdd_Project_Base::ResetCreate_date(), CCdd_Project_Base::ResetId(), CCdd_Project_Base::ResetLog(), CCdd_Project_Base::ResetProject_id(), CCdd_Project_Base::ResetRids(), CCdd_Project_Base::ResetScripts(), CCdd_Project_Base::ResetUpdate_date(), and CCdd_Project_Base::ResetViewers().

Reset() [16/35]

void CCdd_repeat_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 68 of file Cdd_repeat_.cpp.

References CCdd_repeat_Base::ResetAvglen(), CCdd_repeat_Base::ResetCount(), and CCdd_repeat_Base::ResetLocation().

Reset() [17/35]

void CCdd_Script_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 73 of file Cdd_Script_.cpp.

References CCdd_Script_Base::ResetCommands(), CCdd_Script_Base::ResetName(), and CCdd_Script_Base::ResetType().

Reset() [18/35]

void CCdd_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_set_.cpp.

References CCdd_set_Base::m_data, and CCdd_set_Base::m_set_State.

Reset() [19/35]

void CCdd_tree_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 158 of file Cdd_tree_.cpp.

References CCdd_tree_Base::ResetChildren(), CCdd_tree_Base::ResetDescription(), CCdd_tree_Base::ResetId(), CCdd_tree_Base::ResetName(), CCdd_tree_Base::ResetNeighbors(), CCdd_tree_Base::ResetParent(), and CCdd_tree_Base::ResetSiblings().

Reset() [20/35]

void CCdd_tree_set_Base::Reset

(

void

)

Reset data member.

Definition at line 51 of file Cdd_tree_set_.cpp.

References CCdd_tree_set_Base::m_data, and CCdd_tree_set_Base::m_set_State.

Reset() [21/35]

void CCdd_Viewer_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 93 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::ResetAccessions(), CCdd_Viewer_Base::ResetCtrl(), and CCdd_Viewer_Base::ResetRect().

Reset() [22/35]

void CCdd_Viewer_Rect_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 50 of file Cdd_Viewer_Rect_.cpp.

References CCdd_Viewer_Rect_Base::ResetHeight(), CCdd_Viewer_Rect_Base::ResetLeft(), CCdd_Viewer_Rect_Base::ResetTop(), and CCdd_Viewer_Rect_Base::ResetWidth().

Reset() [23/35]

void CDomain_parent_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 95 of file Domain_parent_.cpp.

References CDomain_parent_Base::ResetParent_type(), CDomain_parent_Base::ResetParentid(), and CDomain_parent_Base::ResetSeqannot().

Reset() [24/35]

void CFeature_evidence_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 54 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_not_set, CFeature_evidence_Base::m_choice, and CFeature_evidence_Base::ResetSelection().

Referenced by CFeature_evidence_Base::~CFeature_evidence_Base().

Reset() [25/35]

void CGlobal_id_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 68 of file Global_id_.cpp.

References CGlobal_id_Base::ResetAccession(), CGlobal_id_Base::ResetDatabase(), CGlobal_id_Base::ResetRelease(), and CGlobal_id_Base::ResetVersion().

Referenced by CCdFromFasta::UpdateSourceId().

Reset() [26/35]

void CMatrix_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 62 of file Matrix_.cpp.

References CMatrix_Base::ResetColumns(), CMatrix_Base::ResetNcolumns(), CMatrix_Base::ResetNrows(), CMatrix_Base::ResetRow_labels(), and CMatrix_Base::ResetScale_factor().

Reset() [27/35]

void CNode_annotation_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 62 of file Node_annotation_.cpp.

References CNode_annotation_Base::ResetNote(), and CNode_annotation_Base::ResetPresentInChildCD().

Reset() [28/35]

void CReject_id_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 64 of file Reject_id_.cpp.

References CReject_id_Base::ResetDescription(), and CReject_id_Base::ResetIds().

Reset() [29/35]

void CSeqTree_node_Base::C_Children::C_Footprint::Reset

(

void

)

Reset the whole object.

Definition at line 66 of file SeqTree_node_.cpp.

Reset() [30/35]

void CSeqTree_node_Base::C_Children::Reset

(

void

)

Reset the whole object.

Definition at line 100 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::e_not_set, CSeqTree_node_Base::C_Children::m_choice, and CSeqTree_node_Base::C_Children::ResetSelection().

Reset() [31/35]

void CSeqTree_node_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 238 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::ResetAnnotation(), CSeqTree_node_Base::ResetChildren(), CSeqTree_node_Base::ResetDistance(), CSeqTree_node_Base::ResetIsAnnotated(), and CSeqTree_node_Base::ResetName().

Referenced by CSeqTree_node_Base::C_Children::~C_Children().

Reset() [32/35]

void CSequence_tree_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 86 of file Sequence_tree_.cpp.

References CSequence_tree_Base::ResetAlgorithm(), CSequence_tree_Base::ResetCdAccession(), CSequence_tree_Base::ResetIsAnnotated(), and CSequence_tree_Base::ResetRoot().

Reset() [33/35]

void CTriangle_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 74 of file Triangle_.cpp.

References CTriangle_Base::ResetDiv_ranks(), CTriangle_Base::ResetNelements(), and CTriangle_Base::ResetScores().

Reset() [34/35]

void CUpdate_align_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 88 of file Update_align_.cpp.

References CUpdate_align_Base::ResetDescription(), CUpdate_align_Base::ResetSeqannot(), and CUpdate_align_Base::ResetType().

Reset() [35/35]

void CUpdate_comment_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 52 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_not_set, CUpdate_comment_Base::m_choice, and CUpdate_comment_Base::ResetSelection().

Referenced by CUpdate_comment_Base::~CUpdate_comment_Base().

ResetAccession()

void CGlobal_id_Base::ResetAccession

(

void

)

Reset Accession data member.

Definition at line 50 of file Global_id_.cpp.

References CGlobal_id_Base::m_Accession, and CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::Reset().

ResetAccessions()

void CCdd_Viewer_Base::ResetAccessions

(

void

)

Reset Accessions data member.

Definition at line 87 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::m_Accessions, and CCdd_Viewer_Base::m_set_State.

Referenced by CCdd_Viewer_Base::Reset().

ResetActive()

void CCdd_org_ref_Base::ResetActive ( void  )

inline

Reset Active data member.

Definition at line 329 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Active, and CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::Reset(), and CCdd_org_ref_Base::SetDefaultActive().

ResetAlgorithm()

void CSequence_tree_Base::ResetAlgorithm

(

void

)

Reset Algorithm data member.

Definition at line 58 of file Sequence_tree_.cpp.

References CSequence_tree_Base::m_Algorithm.

Referenced by CSequence_tree_Base::CSequence_tree_Base(), CSequence_tree_Base::GetAlgorithm(), CSequence_tree_Base::Reset(), and CSequence_tree_Base::SetAlgorithm().

ResetAliases()

void CAlign_annot_Base::ResetAliases

(

void

)

Reset Aliases data member.

Definition at line 78 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Aliases, and CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::Reset().

ResetAlignannot()

void CCdd_Base::ResetAlignannot

(

void

)

Reset Alignannot data member.

Definition at line 317 of file Cdd_.cpp.

References CCdd_Base::m_Alignannot.

Referenced by CCdd_Base::Reset().

ResetAncestors()

void CCdd_Base::ResetAncestors

(

void

)

Reset Ancestors data member.

Definition at line 368 of file Cdd_.cpp.

References CCdd_Base::m_Ancestors, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset().

ResetAnnotation()

void CSeqTree_node_Base::ResetAnnotation

(

void

)

Reset Annotation data member.

Definition at line 221 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Annotation.

Referenced by CSeqTree_node_Base::Reset().

ResetAvglen()

void CCdd_repeat_Base::ResetAvglen ( void  )

inline

Reset Avglen data member.

Definition at line 323 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_Avglen, and CCdd_repeat_Base::m_set_State.

Referenced by CCdd_repeat_Base::Reset().

ResetBookname()

END_ENUM_INFO void CCdd_book_ref_Base::ResetBookname

(

void

)

Reset Bookname data member.

Definition at line 67 of file Cdd_book_ref_.cpp.

References CCdd_book_ref_Base::m_Bookname, and CCdd_book_ref_Base::m_set_State.

Referenced by CCdd_book_ref_Base::Reset().

ResetCdAccession()

void CSequence_tree_Base::ResetCdAccession

(

void

)

Reset CdAccession data member.

Definition at line 52 of file Sequence_tree_.cpp.

References CSequence_tree_Base::m_CdAccession, and CSequence_tree_Base::m_set_State.

Referenced by CSequence_tree_Base::Reset().

ResetCdcolor()

void CCdd_Project_Base::ResetCdcolor

(

void

)

Reset Cdcolor data member.

Definition at line 61 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Cdcolor, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetCds()

void CCdd_Project_Base::ResetCds

(

void

)

Reset Cds data member.

Definition at line 55 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Cds, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetCelementid()

void CCdd_book_ref_Base::ResetCelementid

(

void

)

Reset Celementid data member.

Definition at line 73 of file Cdd_book_ref_.cpp.

References CCdd_book_ref_Base::m_Celementid, and CCdd_book_ref_Base::m_set_State.

Referenced by CDDBookRefDialog::OnClick(), and CCdd_book_ref_Base::Reset().

ResetChildren() [1/3]

void CCdd_Base::ResetChildren

(

void

)

Reset Children data member.

Definition at line 248 of file Cdd_.cpp.

References CCdd_Base::m_Children.

Referenced by CCdd_Base::Reset().

ResetChildren() [2/3]

void CCdd_tree_Base::ResetChildren

(

void

)

Reset Children data member.

Definition at line 107 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Children.

Referenced by CCdd_tree_Base::Reset().

ResetChildren() [3/3]

void CSeqTree_node_Base::ResetChildren

(

void

)

Reset Children data member.

Definition at line 207 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Children.

Referenced by CSeqTree_node_Base::CSeqTree_node_Base(), CSeqTree_node_Base::GetChildren(), CSeqTree_node_Base::Reset(), and CSeqTree_node_Base::SetChildren().

ResetClustering_Method()

void CAlgorithm_type_Base::ResetClustering_Method ( void  )

inline

Reset Clustering_Method data member.

Definition at line 633 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Clustering_Method, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetColoring_scope()

void CAlgorithm_type_Base::ResetColoring_scope ( void  )

inline

Reset Coloring_scope data member.

Definition at line 1009 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Coloring_scope, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetColumns()

void CMatrix_Base::ResetColumns

(

void

)

Reset Columns data member.

Definition at line 56 of file Matrix_.cpp.

References CMatrix_Base::m_Columns, and CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::Reset().

ResetCommands()

void CCdd_Script_Base::ResetCommands

(

void

)

Reset Commands data member.

Definition at line 67 of file Cdd_Script_.cpp.

References CCdd_Script_Base::m_Commands, and CCdd_Script_Base::m_set_State.

Referenced by CCdd_Script_Base::Reset().

ResetCount()

void CCdd_repeat_Base::ResetCount ( void  )

inline

Reset Count data member.

Definition at line 255 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_Count, and CCdd_repeat_Base::m_set_State.

Referenced by CCdd_repeat_Base::Reset().

ResetCreate_date()

void CCdd_Project_Base::ResetCreate_date

(

void

)

Reset Create_date data member.

Definition at line 108 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Create_date.

Referenced by CCdd_Project_Base::Reset().

ResetCsubelementid()

void CCdd_book_ref_Base::ResetCsubelementid

(

void

)

Reset Csubelementid data member.

Definition at line 79 of file Cdd_book_ref_.cpp.

References CCdd_book_ref_Base::m_Csubelementid, and CCdd_book_ref_Base::m_set_State.

Referenced by CDDBookRefDialog::OnClick(), and CCdd_book_ref_Base::Reset().

ResetCTerminalExt()

void CAlgorithm_type_Base::ResetCTerminalExt ( void  )

inline

Reset CTerminalExt data member.

Definition at line 915 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_CTerminalExt, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetCtrl()

void CCdd_Viewer_Base::ResetCtrl ( void  )

inline

Reset Ctrl data member.

Definition at line 270 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_Ctrl, and CCdd_Viewer_Base::m_set_State.

Referenced by CCdd_Viewer_Base::Reset().

ResetDatabase()

void CGlobal_id_Base::ResetDatabase

(

void

)

Reset Database data member.

Definition at line 62 of file Global_id_.cpp.

References CGlobal_id_Base::m_Database, and CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::Reset().

ResetDescription() [1/6]

void CAlign_annot_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 66 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Description, and CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::Reset().

ResetDescription() [2/6]

void CCdd_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 89 of file Cdd_.cpp.

References CCdd_Base::m_Description.

Referenced by CCdd_Base::Reset().

ResetDescription() [3/6]

void CCdd_pref_nodes_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 100 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Description.

Referenced by CCdd_pref_nodes_Base::Reset().

ResetDescription() [4/6]

void CCdd_tree_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 73 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Description.

Referenced by CCdd_tree_Base::Reset().

ResetDescription() [5/6]

void CReject_id_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 52 of file Reject_id_.cpp.

References CReject_id_Base::m_Description, and CReject_id_Base::m_set_State.

Referenced by CReject_id_Base::Reset().

ResetDescription() [6/6]

END_ENUM_INFO void CUpdate_align_Base::ResetDescription

(

void

)

Reset Description data member.

Definition at line 65 of file Update_align_.cpp.

References CUpdate_align_Base::m_Description, and CUpdate_align_Base::m_set_State.

Referenced by CUpdate_align_Base::Reset().

ResetDistance() [1/2]

void CCdd_Base::ResetDistance

(

void

)

Reset Distance data member.

Definition at line 214 of file Cdd_.cpp.

References CCdd_Base::m_Distance.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetDistance() [2/2]

void CSeqTree_node_Base::ResetDistance ( void  )

inline

Reset Distance data member.

Definition at line 837 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_Distance, and CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::Reset().

ResetDiv_ranks()

void CTriangle_Base::ResetDiv_ranks

(

void

)

Reset Div_ranks data member.

Definition at line 68 of file Triangle_.cpp.

References CTriangle_Base::m_Div_ranks, and CTriangle_Base::m_set_State.

Referenced by CTriangle_Base::Reset().

ResetElementid()

void CCdd_book_ref_Base::ResetElementid ( void  )

inline

Reset Elementid data member.

Definition at line 489 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Elementid, and CCdd_book_ref_Base::m_set_State.

Referenced by CDDBookRefDialog::OnClick(), and CCdd_book_ref_Base::Reset().

ResetEvidence()

void CAlign_annot_Base::ResetEvidence

(

void

)

Reset Evidence data member.

Definition at line 72 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Evidence, and CAlign_annot_Base::m_set_State.

Referenced by CAlign_annot_Base::Reset().

ResetFeatures()

void CCdd_Base::ResetFeatures

(

void

)

Reset Features data member.

Definition at line 112 of file Cdd_.cpp.

References CCdd_Base::m_Features.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetGapExtend()

void CAlgorithm_type_Base::ResetGapExtend ( void  )

inline

Reset GapExtend data member.

Definition at line 774 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapExtend, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetGapOpen()

void CAlgorithm_type_Base::ResetGapOpen ( void  )

inline

Reset GapOpen data member.

Definition at line 727 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapOpen, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetGapScaleFactor()

void CAlgorithm_type_Base::ResetGapScaleFactor ( void  )

inline

Reset GapScaleFactor data member.

Definition at line 821 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapScaleFactor, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetHeight()

void CCdd_Viewer_Rect_Base::ResetHeight ( void  )

inline

Reset Height data member.

Definition at line 435 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_Height, and CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::Reset().

ResetId() [1/3]

void CCdd_Base::ResetId

(

void

)

Reset Id data member.

Definition at line 75 of file Cdd_.cpp.

References CCdd_Base::m_Id.

Referenced by CCdd_Base::CCdd_Base(), CCdd_Base::GetId(), CCdd_Base::Reset(), and CCdd_Base::SetId().

ResetId() [2/3]

void CCdd_Project_Base::ResetId

(

void

)

Reset Id data member.

Definition at line 85 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Id.

Referenced by CCdd_Project_Base::Reset().

ResetId() [3/3]

void CCdd_tree_Base::ResetId

(

void

)

Reset Id data member.

Definition at line 59 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Id.

Referenced by CCdd_tree_Base::CCdd_tree_Base(), CCdd_tree_Base::GetId(), CCdd_tree_Base::Reset(), and CCdd_tree_Base::SetId().

ResetIds()

void CReject_id_Base::ResetIds

(

void

)

Reset Ids data member.

Definition at line 58 of file Reject_id_.cpp.

References CReject_id_Base::m_Ids, and CReject_id_Base::m_set_State.

Referenced by CReject_id_Base::Reset().

ResetIsAnnotated() [1/2]

void CSeqTree_node_Base::ResetIsAnnotated ( void  )

inline

Reset IsAnnotated data member.

Definition at line 740 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_IsAnnotated, and CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::Reset(), and CSeqTree_node_Base::SetDefaultIsAnnotated().

ResetIsAnnotated() [2/2]

void CSequence_tree_Base::ResetIsAnnotated ( void  )

inline

Reset IsAnnotated data member.

Definition at line 377 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_IsAnnotated, and CSequence_tree_Base::m_set_State.

Referenced by CSequence_tree_Base::Reset(), and CSequence_tree_Base::SetDefaultIsAnnotated().

ResetLeft()

void CCdd_Viewer_Rect_Base::ResetLeft ( void  )

inline

Reset Left data member.

Definition at line 341 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_Left, and CCdd_Viewer_Rect_Base::m_set_State.

Referenced by CCdd_Viewer_Rect_Base::Reset().

ResetLocation() [1/2]

void CAlign_annot_Base::ResetLocation

(

void

)

Reset Location data member.

Definition at line 52 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Location.

Referenced by CAlign_annot_Base::CAlign_annot_Base(), CAlign_annot_Base::GetLocation(), CAlign_annot_Base::Reset(), and CAlign_annot_Base::SetLocation().

ResetLocation() [2/2]

void CCdd_repeat_Base::ResetLocation

(

void

)

Reset Location data member.

Definition at line 51 of file Cdd_repeat_.cpp.

References CCdd_repeat_Base::m_Location.

Referenced by CCdd_repeat_Base::Reset().

ResetLog()

void CCdd_Project_Base::ResetLog

(

void

)

Reset Log data member.

Definition at line 73 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Log, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetMaster3d()

void CCdd_Base::ResetMaster3d

(

void

)

Reset Master3d data member.

Definition at line 311 of file Cdd_.cpp.

References CCdd_Base::m_Master3d, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset(), and CCdCore::SynchronizeMaster3D().

ResetModel_organisms()

void CCdd_pref_nodes_Base::ResetModel_organisms

(

void

)

Reset Model_organisms data member.

Definition at line 66 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Model_organisms.

Referenced by CCdd_pref_nodes_Base::Reset().

ResetMotif()

void CAlign_annot_Base::ResetMotif

(

void

)

Reset Motif data member.

Definition at line 84 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Motif, and CAlign_annot_Base::m_set_State.

Referenced by CDDAnnotateDialog::DeleteMotif(), and CAlign_annot_Base::Reset().

ResetMotifuse()

void CAlign_annot_Base::ResetMotifuse ( void  )

inline

Reset Motifuse data member.

Definition at line 650 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Motifuse, and CAlign_annot_Base::m_set_State.

Referenced by CDDAnnotateDialog::DeleteMotif(), and CAlign_annot_Base::Reset().

ResetName() [1/4]

void CCdd_Base::ResetName

(

void

)

Reset Name data member.

Definition at line 69 of file Cdd_.cpp.

References CCdd_Base::m_Name, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset().

ResetName() [2/4]

END_ENUM_INFO void CCdd_Script_Base::ResetName

(

void

)

Reset Name data member.

Definition at line 61 of file Cdd_Script_.cpp.

References CCdd_Script_Base::m_Name, and CCdd_Script_Base::m_set_State.

Referenced by CCdd_Script_Base::Reset().

ResetName() [3/4]

void CCdd_tree_Base::ResetName

(

void

)

Reset Name data member.

Definition at line 53 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Name, and CCdd_tree_Base::m_set_State.

Referenced by CCdd_tree_Base::Reset().

ResetName() [4/4]

void CSeqTree_node_Base::ResetName

(

void

)

Reset Name data member.

Definition at line 201 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Name, and CSeqTree_node_Base::m_set_State.

Referenced by CSeqTree_node_Base::Reset().

ResetNcolumns()

void CMatrix_Base::ResetNcolumns ( void  )

inline

Reset Ncolumns data member.

Definition at line 323 of file Matrix_.hpp.

References CMatrix_Base::m_Ncolumns, and CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::Reset().

ResetNeighbors() [1/2]

void CCdd_Base::ResetNeighbors

(

void

)

Reset Neighbors data member.

Definition at line 282 of file Cdd_.cpp.

References CCdd_Base::m_Neighbors.

Referenced by CCdd_Base::Reset().

ResetNeighbors() [2/2]

void CCdd_tree_Base::ResetNeighbors

(

void

)

Reset Neighbors data member.

Definition at line 141 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Neighbors.

Referenced by CCdd_tree_Base::Reset().

ResetNelements()

void CTriangle_Base::ResetNelements ( void  )

inline

Reset Nelements data member.

Definition at line 252 of file Triangle_.hpp.

References CTriangle_Base::m_Nelements, and CTriangle_Base::m_set_State.

Referenced by CTriangle_Base::Reset().

ResetNote()

void CNode_annotation_Base::ResetNote

(

void

)

Reset Note data member.

Definition at line 56 of file Node_annotation_.cpp.

References CNode_annotation_Base::m_Note, and CNode_annotation_Base::m_set_State.

Referenced by CNode_annotation_Base::Reset().

ResetNrows()

void CMatrix_Base::ResetNrows ( void  )

inline

Reset Nrows data member.

Definition at line 370 of file Matrix_.hpp.

References CMatrix_Base::m_Nrows, and CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::Reset().

ResetNTerminalExt()

void CAlgorithm_type_Base::ResetNTerminalExt ( void  )

inline

Reset NTerminalExt data member.

Definition at line 868 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_NTerminalExt, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetOptional_nodes()

void CCdd_pref_nodes_Base::ResetOptional_nodes

(

void

)

Reset Optional_nodes data member.

Definition at line 83 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Optional_nodes.

Referenced by CCdd_pref_nodes_Base::Reset().

ResetParent() [1/2]

void CCdd_Base::ResetParent

(

void

)

Reset Parent data member.

Definition at line 231 of file Cdd_.cpp.

References CCdd_Base::m_Parent.

Referenced by CCdd_Base::Reset().

ResetParent() [2/2]

void CCdd_tree_Base::ResetParent

(

void

)

Reset Parent data member.

Definition at line 90 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Parent.

Referenced by CCdd_tree_Base::Reset().

ResetParent_tax_id()

void CCdd_org_ref_Base::ResetParent_tax_id ( void  )

inline

Reset Parent_tax_id data member.

Definition at line 379 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Parent_tax_id, and CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::Reset().

ResetParent_type()

void CDomain_parent_Base::ResetParent_type ( void  )

inline

Reset Parent_type data member.

Definition at line 281 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Parent_type, and CDomain_parent_Base::m_set_State.

Referenced by CDomain_parent_Base::Reset().

ResetParentid()

END_ENUM_INFO void CDomain_parent_Base::ResetParentid

(

void

)

Reset Parentid data member.

Definition at line 64 of file Domain_parent_.cpp.

References CDomain_parent_Base::m_Parentid.

Referenced by CDomain_parent_Base::CDomain_parent_Base(), CDomain_parent_Base::GetParentid(), CDomain_parent_Base::Reset(), and CDomain_parent_Base::SetParentid().

ResetPending()

void CCdd_Base::ResetPending

(

void

)

Reset Pending data member.

Definition at line 299 of file Cdd_.cpp.

References CCdd_Base::m_Pending, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset(), and SeqSwapper::swapSequences().

ResetPosfreq()

void CCdd_Base::ResetPosfreq

(

void

)

Reset Posfreq data member.

Definition at line 180 of file Cdd_.cpp.

References CCdd_Base::m_Posfreq.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetPreferred_nodes()

void CCdd_pref_nodes_Base::ResetPreferred_nodes

(

void

)

Reset Preferred_nodes data member.

Definition at line 52 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Preferred_nodes.

Referenced by CCdd_pref_nodes_Base::CCdd_pref_nodes_Base(), CCdd_pref_nodes_Base::GetPreferred_nodes(), CCdd_pref_nodes_Base::Reset(), and CCdd_pref_nodes_Base::SetPreferred_nodes().

ResetPresentInChildCD()

void CNode_annotation_Base::ResetPresentInChildCD

(

void

)

Reset PresentInChildCD data member.

Definition at line 50 of file Node_annotation_.cpp.

References CNode_annotation_Base::m_PresentInChildCD, and CNode_annotation_Base::m_set_State.

Referenced by CNode_annotation_Base::Reset().

ResetProfile_range()

void CCdd_Base::ResetProfile_range

(

void

)

Reset Profile_range data member.

Definition at line 146 of file Cdd_.cpp.

References CCdd_Base::m_Profile_range.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetProject_id()

void CCdd_Project_Base::ResetProject_id ( void  )

inline

Reset Project_id data member.

Definition at line 754 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Project_id, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetRank()

void CCdd_org_ref_Base::ResetRank

(

void

)

Reset Rank data member.

Definition at line 65 of file Cdd_org_ref_.cpp.

References CCdd_org_ref_Base::m_Rank, and CCdd_org_ref_Base::m_set_State.

Referenced by CCdd_org_ref_Base::Reset().

ResetRect()

END_ENUM_INFO void CCdd_Viewer_Base::ResetRect

(

void

)

Reset Rect data member.

Definition at line 70 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::m_Rect.

Referenced by CCdd_Viewer_Base::Reset().

ResetReference()

void CCdd_org_ref_Base::ResetReference

(

void

)

Reset Reference data member.

Definition at line 51 of file Cdd_org_ref_.cpp.

References CCdd_org_ref_Base::m_Reference.

Referenced by CCdd_org_ref_Base::CCdd_org_ref_Base(), CCdd_org_ref_Base::GetReference(), CCdd_org_ref_Base::Reset(), and CCdd_org_ref_Base::SetReference().

ResetRejects()

void CCdd_Base::ResetRejects

(

void

)

Reset Rejects data member.

Definition at line 305 of file Cdd_.cpp.

References CCdd_Base::m_Rejects, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset().

ResetRelease()

void CGlobal_id_Base::ResetRelease

(

void

)

Reset Release data member.

Definition at line 56 of file Global_id_.cpp.

References CGlobal_id_Base::m_Release, and CGlobal_id_Base::m_set_State.

Referenced by CGlobal_id_Base::Reset().

ResetRids()

void CCdd_Project_Base::ResetRids

(

void

)

Reset Rids data member.

Definition at line 102 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Rids, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetRoot()

void CSequence_tree_Base::ResetRoot

(

void

)

Reset Root data member.

Definition at line 72 of file Sequence_tree_.cpp.

References CSequence_tree_Base::m_Root.

Referenced by SeqTreeAsnizer::convertToAsnSeqTree(), CSequence_tree_Base::CSequence_tree_Base(), CSequence_tree_Base::GetRoot(), CSequence_tree_Base::Reset(), and CSequence_tree_Base::SetRoot().

ResetRow_labels()

void CMatrix_Base::ResetRow_labels

(

void

)

Reset Row_labels data member.

Definition at line 50 of file Matrix_.cpp.

References CMatrix_Base::m_Row_labels, and CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::Reset().

ResetRowId()

void CSeqTree_node_Base::C_Children::C_Footprint::ResetRowId ( void  )

inline

Reset RowId data member.

Definition at line 638 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State.

ResetScale_factor()

void CMatrix_Base::ResetScale_factor ( void  )

inline

Reset Scale_factor data member.

Definition at line 442 of file Matrix_.hpp.

References CMatrix_Base::m_Scale_factor, and CMatrix_Base::m_set_State.

Referenced by CMatrix_Base::Reset().

ResetScore_Matrix()

void CAlgorithm_type_Base::ResetScore_Matrix ( void  )

inline

Reset Score_Matrix data member.

Definition at line 680 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Score_Matrix, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetScoremat()

void CCdd_Base::ResetScoremat

(

void

)

Reset Scoremat data member.

Definition at line 197 of file Cdd_.cpp.

References CCdd_Base::m_Scoremat.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetScoreparams()

void CCdd_Base::ResetScoreparams

(

void

)

Reset Scoreparams data member.

Definition at line 374 of file Cdd_.cpp.

References CCdd_Base::m_Scoreparams.

Referenced by CCdd_Base::Reset().

ResetScores()

void CTriangle_Base::ResetScores

(

void

)

Reset Scores data member.

Definition at line 51 of file Triangle_.cpp.

References CTriangle_Base::m_Scores.

Referenced by CTriangle_Base::Reset().

ResetScoring_Scheme()

void CAlgorithm_type_Base::ResetScoring_Scheme ( void  )

inline

Reset Scoring_Scheme data member.

Definition at line 586 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Scoring_Scheme, and CAlgorithm_type_Base::m_set_State.

Referenced by CAlgorithm_type_Base::Reset().

ResetScripts()

void CCdd_Project_Base::ResetScripts

(

void

)

Reset Scripts data member.

Definition at line 79 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Scripts, and CCdd_Project_Base::m_set_State.

Referenced by CCdd_Project_Base::Reset().

ResetSelection() [1/6]

void CCdd_descr_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 107 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Attribution, CCdd_descr_Base::e_Book_ref, CCdd_descr_Base::e_Category, CCdd_descr_Base::e_Comment, CCdd_descr_Base::e_Create_date, CCdd_descr_Base::e_not_set, CCdd_descr_Base::e_Old_root, CCdd_descr_Base::e_Othername, CCdd_descr_Base::e_Reference, CCdd_descr_Base::e_Repeats, CCdd_descr_Base::e_Scrapbook, CCdd_descr_Base::e_Source, CCdd_descr_Base::e_Source_id, CCdd_descr_Base::e_Tax_source, CCdd_descr_Base::e_Title, CCdd_descr_Base::e_Update_date, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::m_Scrapbook, and CCdd_descr_Base::m_string.

Referenced by CCdd_descr_Base::Reset(), CCdd_descr_Base::SetAttribution(), CCdd_descr_Base::SetBook_ref(), CCdd_descr_Base::SetCreate_date(), CCdd_descr_Base::SetOld_root(), CCdd_descr_Base::SetReference(), CCdd_descr_Base::SetRepeats(), CCdd_descr_Base::SetSource_id(), CCdd_descr_Base::SetTax_source(), and CCdd_descr_Base::SetUpdate_date().

ResetSelection() [2/6]

void CCdd_id_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 57 of file Cdd_id_.cpp.

References CCdd_id_Base::e_Gid, CCdd_id_Base::e_not_set, CCdd_id_Base::m_choice, and CCdd_id_Base::m_object.

Referenced by CCdd_id_Base::Reset(), and CCdd_id_Base::SetGid().

ResetSelection() [3/6]

void CCdd_pref_node_descr_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 57 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::e_Create_date, CCdd_pref_node_descr_Base::e_Description, CCdd_pref_node_descr_Base::e_not_set, CCdd_pref_node_descr_Base::m_choice, CCdd_pref_node_descr_Base::m_object, and CCdd_pref_node_descr_Base::m_string.

Referenced by CCdd_pref_node_descr_Base::Reset(), and CCdd_pref_node_descr_Base::SetCreate_date().

ResetSelection() [4/6]

void CFeature_evidence_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 60 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Book_ref, CFeature_evidence_Base::e_Bsannot, CFeature_evidence_Base::e_Comment, CFeature_evidence_Base::e_not_set, CFeature_evidence_Base::e_Reference, CFeature_evidence_Base::e_Seqfeat, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::m_string.

Referenced by CFeature_evidence_Base::Reset(), CFeature_evidence_Base::SetBook_ref(), CFeature_evidence_Base::SetBsannot(), CFeature_evidence_Base::SetReference(), and CFeature_evidence_Base::SetSeqfeat().

ResetSelection() [5/6]

void CSeqTree_node_Base::C_Children::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 106 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::e_Children, CSeqTree_node_Base::C_Children::e_Footprint, CSeqTree_node_Base::C_Children::e_not_set, CSeqTree_node_Base::C_Children::m_Children, CSeqTree_node_Base::C_Children::m_choice, and CSeqTree_node_Base::C_Children::m_object.

Referenced by CSeqTree_node_Base::C_Children::Reset(), and CSeqTree_node_Base::C_Children::SetFootprint().

ResetSelection() [6/6]

void CUpdate_comment_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 58 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Addthis, CUpdate_comment_Base::e_Comment, CUpdate_comment_Base::e_not_set, CUpdate_comment_Base::e_Reference, CUpdate_comment_Base::e_Reject_loc, CUpdate_comment_Base::e_Replaces, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::m_string.

Referenced by CUpdate_comment_Base::Reset(), CUpdate_comment_Base::SetAddthis(), CUpdate_comment_Base::SetReference(), CUpdate_comment_Base::SetReject_loc(), and CUpdate_comment_Base::SetReplaces().

ResetSeqannot() [1/3]

void CCdd_Base::ResetSeqannot

(

void

)

Reset Seqannot data member.

Definition at line 106 of file Cdd_.cpp.

References CCdd_Base::m_Seqannot, and CCdd_Base::m_set_State.

Referenced by CCdd_Base::Reset().

ResetSeqannot() [2/3]

void CDomain_parent_Base::ResetSeqannot

(

void

)

Reset Seqannot data member.

Definition at line 78 of file Domain_parent_.cpp.

References CDomain_parent_Base::m_Seqannot.

Referenced by CDomain_parent_Base::Reset().

ResetSeqannot() [3/3]

void CUpdate_align_Base::ResetSeqannot

(

void

)

Reset Seqannot data member.

Definition at line 71 of file Update_align_.cpp.

References CUpdate_align_Base::m_Seqannot.

Referenced by CUpdate_align_Base::Reset().

ResetSeqRange()

void CSeqTree_node_Base::C_Children::C_Footprint::ResetSeqRange

(

void

)

Reset SeqRange data member.

Definition at line 52 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::C_Footprint::m_SeqRange.

Referenced by CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint().

ResetSeqtree()

void CCdd_Base::ResetSeqtree

(

void

)

Reset Seqtree data member.

Definition at line 391 of file Cdd_.cpp.

References CCdd_Base::m_Seqtree.

Referenced by CCdd_Base::Reset().

ResetSequences()

void CCdd_Base::ResetSequences

(

void

)

Reset Sequences data member.

Definition at line 129 of file Cdd_.cpp.

References CCdd_Base::m_Sequences.

Referenced by CCdd_Base::Reset().

ResetSiblings() [1/2]

void CCdd_Base::ResetSiblings

(

void

)

Reset Siblings data member.

Definition at line 265 of file Cdd_.cpp.

References CCdd_Base::m_Siblings.

Referenced by CCdd_Base::Reset().

ResetSiblings() [2/2]

void CCdd_tree_Base::ResetSiblings

(

void

)

Reset Siblings data member.

Definition at line 124 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Siblings.

Referenced by CCdd_tree_Base::Reset().

ResetStyle_dictionary()

void CCdd_Base::ResetStyle_dictionary

(

void

)

Reset Style_dictionary data member.

Definition at line 334 of file Cdd_.cpp.

References CCdd_Base::m_Style_dictionary.

Referenced by CCdd_Base::Reset().

ResetSubelementid()

void CCdd_book_ref_Base::ResetSubelementid ( void  )

inline

Reset Subelementid data member.

Definition at line 536 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State, and CCdd_book_ref_Base::m_Subelementid.

Referenced by CDDBookRefDialog::OnClick(), and CCdd_book_ref_Base::Reset().

ResetTextelement()

void CCdd_book_ref_Base::ResetTextelement ( void  )

inline

Reset Textelement data member.

Definition at line 442 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State, and CCdd_book_ref_Base::m_Textelement.

Referenced by CCdd_book_ref_Base::Reset().

ResetTop()

void CCdd_Viewer_Rect_Base::ResetTop ( void  )

inline

Reset Top data member.

Definition at line 294 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State, and CCdd_Viewer_Rect_Base::m_Top.

Referenced by CCdd_Viewer_Rect_Base::Reset().

ResetTree_scope()

void CAlgorithm_type_Base::ResetTree_scope ( void  )

inline

Reset Tree_scope data member.

Definition at line 962 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State, and CAlgorithm_type_Base::m_Tree_scope.

Referenced by CAlgorithm_type_Base::Reset().

ResetTrunc_master()

void CCdd_Base::ResetTrunc_master

(

void

)

Reset Trunc_master data member.

Definition at line 163 of file Cdd_.cpp.

References CCdd_Base::m_Trunc_master.

Referenced by CCdd_Base::Reset(), and ResetFields().

ResetType() [1/3]

void CAlign_annot_Base::ResetType ( void  )

inline

Reset Type data member.

Definition at line 531 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State, and CAlign_annot_Base::m_Type.

Referenced by CDDAnnotateDialog::EditAnnotation(), and CAlign_annot_Base::Reset().

ResetType() [2/3]

void CCdd_Script_Base::ResetType ( void  )

inline

Reset Type data member.

Definition at line 264 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_set_State, and CCdd_Script_Base::m_Type.

Referenced by CCdd_Script_Base::Reset().

ResetType() [3/3]

void CUpdate_align_Base::ResetType ( void  )

inline

Reset Type data member.

Definition at line 311 of file Update_align_.hpp.

References CUpdate_align_Base::m_set_State, and CUpdate_align_Base::m_Type.

Referenced by CUpdate_align_Base::Reset().

ResetUpdate_date()

void CCdd_Project_Base::ResetUpdate_date

(

void

)

Reset Update_date data member.

Definition at line 125 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Update_date.

Referenced by CCdd_Project_Base::Reset().

ResetUser_annotations()

void CCdd_Base::ResetUser_annotations

(

void

)

Reset User_annotations data member.

Definition at line 351 of file Cdd_.cpp.

References CCdd_Base::m_User_annotations.

Referenced by CCdd_Base::Reset().

ResetVersion()

void CGlobal_id_Base::ResetVersion ( void  )

inline

Reset Version data member.

Definition at line 400 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State, and CGlobal_id_Base::m_Version.

Referenced by CGlobal_id_Base::Reset().

ResetViewers()

void CCdd_Project_Base::ResetViewers

(

void

)

Reset Viewers data member.

Definition at line 67 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_set_State, and CCdd_Project_Base::m_Viewers.

Referenced by CCdd_Project_Base::Reset().

ResetWidth()

void CCdd_Viewer_Rect_Base::ResetWidth ( void  )

inline

Reset Width data member.

Definition at line 388 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State, and CCdd_Viewer_Rect_Base::m_Width.

Referenced by CCdd_Viewer_Rect_Base::Reset().

Select() [1/12]

void CCdd_descr_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [2/12]

void CCdd_id_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [3/12]

void CCdd_pref_node_descr_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [4/12]

void CFeature_evidence_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [5/12]

void CSeqTree_node_Base::C_Children::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [6/12]

void CUpdate_comment_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [7/12]

void CCdd_descr_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CCdd_descr_Base::SetAttribution(), CCdd_descr_Base::SetBook_ref(), CCdd_descr_Base::SetCategory(), CCdd_descr_Base::SetComment(), CCdd_descr_Base::SetCreate_date(), CCdd_descr_Base::SetCuration_status(), CCdd_descr_Base::SetOld_root(), CCdd_descr_Base::SetOthername(), CCdd_descr_Base::SetReadonly_status(), CCdd_descr_Base::SetReference(), CCdd_descr_Base::SetRepeats(), CCdd_descr_Base::SetScrapbook(), CCdd_descr_Base::SetSource(), CCdd_descr_Base::SetSource_id(), CCdd_descr_Base::SetStatus(), CCdd_descr_Base::SetTax_source(), CCdd_descr_Base::SetTitle(), and CCdd_descr_Base::SetUpdate_date().

Select() [8/12]

void CCdd_id_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CCdd_id_Base::SetGid(), and CCdd_id_Base::SetUid().

Select() [9/12]

void CCdd_pref_node_descr_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CCdd_pref_node_descr_Base::SetCreate_date(), and CCdd_pref_node_descr_Base::SetDescription().

Select() [10/12]

void CFeature_evidence_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CFeature_evidence_Base::SetBook_ref(), CFeature_evidence_Base::SetBsannot(), CFeature_evidence_Base::SetComment(), CFeature_evidence_Base::SetReference(), and CFeature_evidence_Base::SetSeqfeat().

Select() [11/12]

void CSeqTree_node_Base::C_Children::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CSeqTree_node_Base::C_Children::SetChildren(), and CSeqTree_node_Base::C_Children::SetFootprint().

Select() [12/12]

void CUpdate_comment_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CUpdate_comment_Base::SetAddthis(), CUpdate_comment_Base::SetComment(), CUpdate_comment_Base::SetReference(), CUpdate_comment_Base::SetReject_loc(), and CUpdate_comment_Base::SetReplaces().

SelectionName() [1/6]

NCBI_NS_STD::string CCdd_descr_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 214 of file Cdd_descr_.cpp.

References CCdd_descr_Base::sm_SelectionNames.

SelectionName() [2/6]

NCBI_NS_STD::string CCdd_id_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 90 of file Cdd_id_.cpp.

References CCdd_id_Base::sm_SelectionNames.

SelectionName() [3/6]

NCBI_NS_STD::string CCdd_pref_node_descr_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 93 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::sm_SelectionNames.

SelectionName() [4/6]

NCBI_NS_STD::string CFeature_evidence_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 111 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::sm_SelectionNames.

SelectionName() [5/6]

NCBI_NS_STD::string CSeqTree_node_Base::C_Children::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 142 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::sm_SelectionNames.

SelectionName() [6/6]

NCBI_NS_STD::string CUpdate_comment_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 109 of file Update_comment_.cpp.

References CUpdate_comment_Base::sm_SelectionNames.

Set() [1/7]

CAlign_annot_set_Base::Tdata & CAlign_annot_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Align_annot_set_.hpp.

References CAlign_annot_set_Base::m_data, and CAlign_annot_set_Base::m_set_State.

Referenced by CCdCore::GetAlignmentAnnotationDescription().

Set() [2/7]

CCdd_descr_set_Base::Tdata & CCdd_descr_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_descr_set_.hpp.

References CCdd_descr_set_Base::m_data, and CCdd_descr_set_Base::m_set_State.

Referenced by CCdCore::AddCddDescr(), InsertAfter(), CDDRefDialog::OnButton(), CCdCore::RemoveCddDescrsOfType(), CCdCore::SetComment(), and CCdFromFasta::UpdateSourceId().

Set() [3/7]

CCdd_id_set_Base::Tdata & CCdd_id_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_id_set_.hpp.

References CCdd_id_set_Base::m_data, and CCdd_id_set_Base::m_set_State.

Referenced by CCdCore::EraseUID(), CCdCore::SetAccession(), and CCdFromFasta::UpdateSourceId().

Set() [4/7]

CCdd_org_ref_set_Base::Tdata & CCdd_org_ref_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_org_ref_set_.hpp.

References CCdd_org_ref_set_Base::m_data, and CCdd_org_ref_set_Base::m_set_State.

Referenced by CPriorityTaxNodes::TaxIdsToCddOrgRefSet().

Set() [5/7]

CCdd_pref_node_descr_set_Base::Tdata & CCdd_pref_node_descr_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_pref_node_descr_set_.hpp.

References CCdd_pref_node_descr_set_Base::m_data, and CCdd_pref_node_descr_set_Base::m_set_State.

Set() [6/7]

CCdd_set_Base::Tdata & CCdd_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_set_.hpp.

References CCdd_set_Base::m_data, and CCdd_set_Base::m_set_State.

Set() [7/7]

CCdd_tree_set_Base::Tdata & CCdd_tree_set_Base::Set ( void  )

inline

Assign a value to data member.

Returns

Reference to the data value.

Definition at line 170 of file Cdd_tree_set_.hpp.

References CCdd_tree_set_Base::m_data, and CCdd_tree_set_Base::m_set_State.

SetAccession() [1/3]

void CGlobal_id_Base::SetAccession ( const TAccession &  value )

inline

Assign a value to Accession data member.

Parameters

value

Value to assign

Definition at line 315 of file Global_id_.hpp.

References CGlobal_id_Base::m_Accession, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetAccession() [2/3]

void CGlobal_id_Base::SetAccession ( CGlobal_id_Base::TAccession &&  value )

inline

Definition at line 322 of file Global_id_.hpp.

References CGlobal_id_Base::m_Accession, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetAccession() [3/3]

CGlobal_id_Base::TAccession & CGlobal_id_Base::SetAccession ( void  )

inline

Assign a value to Accession data member.

Returns

Reference to the data value.

Definition at line 329 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetAccession(), CGlobal_id_Base::m_Accession, CGlobal_id_Base::m_set_State, and CSerialObject::UnassignedString().

SetAccessions()

CCdd_Viewer_Base::TAccessions & CCdd_Viewer_Base::SetAccessions ( void  )

inline

Assign a value to Accessions data member.

Returns

Reference to the data value.

Definition at line 344 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_Accessions, and CCdd_Viewer_Base::m_set_State.

SetActive() [1/2]

void CCdd_org_ref_Base::SetActive ( CCdd_org_ref_Base::TActive  value )

inline

Assign a value to Active data member.

Parameters

value

Value to assign

Definition at line 348 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Active, CCdd_org_ref_Base::m_set_State, and rapidjson::value.

Referenced by CPriorityTaxNodes::TaxIdsToCddOrgRefSet().

SetActive() [2/2]

CCdd_org_ref_Base::TActive & CCdd_org_ref_Base::SetActive ( void  )

inline

Assign a value to Active data member.

Returns

Reference to the data value.

Definition at line 355 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::IsSetActive(), CCdd_org_ref_Base::m_Active, CCdd_org_ref_Base::m_set_State, and CSerialObject::UnassignedByte().

SetAddthis() [1/2]

void CUpdate_comment_Base::SetAddthis

(

CUpdate_comment_Base::TAddthis &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 137 of file Update_comment_.cpp.

References CObject::AddReference(), CUpdate_comment_Base::e_Addthis, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, CUpdate_comment_Base::ResetSelection(), and rapidjson::value.

SetAddthis() [2/2]

CUpdate_comment_Base::TAddthis & CUpdate_comment_Base::SetAddthis

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 131 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Addthis, eDoNotResetVariant, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::Select().

SetAlgorithm() [1/2]

void CSequence_tree_Base::SetAlgorithm

(

CSequence_tree_Base::TAlgorithm &

value

)

Assign a value to Algorithm data member.

Parameters

value

Reference to value.

Definition at line 67 of file Sequence_tree_.cpp.

References CSequence_tree_Base::m_Algorithm, and rapidjson::value.

SetAlgorithm() [2/2]

CSequence_tree_Base::TAlgorithm & CSequence_tree_Base::SetAlgorithm ( void  )

inline

Assign a value to Algorithm data member.

Returns

Reference to the data value.

Definition at line 356 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Algorithm, and CSequence_tree_Base::ResetAlgorithm().

SetAliases()

CAlign_annot_Base::TAliases & CAlign_annot_Base::SetAliases ( void  )

inline

Assign a value to Aliases data member.

Returns

Reference to the data value.

Definition at line 584 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Aliases, and CAlign_annot_Base::m_set_State.

SetAlignannot() [1/2]

void CCdd_Base::SetAlignannot

(

CCdd_Base::TAlignannot &

value

)

Assign a value to Alignannot data member.

Parameters

value

Reference to value.

Definition at line 322 of file Cdd_.cpp.

References CCdd_Base::m_Alignannot, and rapidjson::value.

Referenced by ASNDataManager::GetCDDAnnotSet(), and remasterAlignannot().

SetAlignannot() [2/2]

CCdd_Base::TAlignannot & CCdd_Base::SetAlignannot

(

void

)

Assign a value to Alignannot data member.

Returns

Reference to the data value.

Definition at line 327 of file Cdd_.cpp.

References CCdd_Base::m_Alignannot.

Referenced by CCdCore::GetAlignmentAnnotationDescription(), and CCdCore::GetNumAlignmentAnnotations().

SetAncestors()

CCdd_Base::TAncestors & CCdd_Base::SetAncestors ( void  )

inline

Assign a value to Ancestors data member.

Returns

Reference to the data value.

Definition at line 1622 of file Cdd_.hpp.

References CCdd_Base::m_Ancestors, and CCdd_Base::m_set_State.

SetAnnotation() [1/2]

void CSeqTree_node_Base::SetAnnotation

(

CSeqTree_node_Base::TAnnotation &

value

)

Assign a value to Annotation data member.

Parameters

value

Reference to value.

Definition at line 226 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Annotation, and rapidjson::value.

Referenced by SeqTreeAsnizer::fillAsnSeqTreeNode().

SetAnnotation() [2/2]

CSeqTree_node_Base::TAnnotation & CSeqTree_node_Base::SetAnnotation

(

void

)

Assign a value to Annotation data member.

Returns

Reference to the data value.

Definition at line 231 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Annotation.

SetAttribution() [1/2]

void CCdd_descr_Base::SetAttribution

(

CCdd_descr_Base::TAttribution &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 436 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Attribution, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetAttribution() [2/2]

CCdd_descr_Base::TAttribution & CCdd_descr_Base::SetAttribution

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 430 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Attribution, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetAvglen() [1/2]

void CCdd_repeat_Base::SetAvglen ( CCdd_repeat_Base::TAvglen  value )

inline

Assign a value to Avglen data member.

Parameters

value

Value to assign

Definition at line 339 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_Avglen, CCdd_repeat_Base::m_set_State, and rapidjson::value.

SetAvglen() [2/2]

CCdd_repeat_Base::TAvglen & CCdd_repeat_Base::SetAvglen ( void  )

inline

Assign a value to Avglen data member.

Returns

Reference to the data value.

Definition at line 346 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::IsSetAvglen(), CCdd_repeat_Base::m_Avglen, CCdd_repeat_Base::m_set_State, and CSerialObject::UnassignedByte().

SetBook_ref() [1/4]

void CCdd_descr_Base::SetBook_ref

(

CCdd_descr_Base::TBook_ref &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 414 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Book_ref, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetBook_ref() [2/4]

void CFeature_evidence_Base::SetBook_ref

(

CFeature_evidence_Base::TBook_ref &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 205 of file Feature_evidence_.cpp.

References CObject::AddReference(), CFeature_evidence_Base::e_Book_ref, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, CFeature_evidence_Base::ResetSelection(), and rapidjson::value.

SetBook_ref() [3/4]

CCdd_descr_Base::TBook_ref & CCdd_descr_Base::SetBook_ref

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 408 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Book_ref, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

Referenced by CDDBookRefDialog::OnClick().

SetBook_ref() [4/4]

CFeature_evidence_Base::TBook_ref & CFeature_evidence_Base::SetBook_ref

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 199 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Book_ref, eDoNotResetVariant, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::Select().

SetBookname() [1/3]

void CCdd_book_ref_Base::SetBookname ( const TBookname &  value )

inline

Assign a value to Bookname data member.

Parameters

value

Value to assign

Definition at line 404 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Bookname, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetBookname() [2/3]

void CCdd_book_ref_Base::SetBookname ( CCdd_book_ref_Base::TBookname &&  value )

inline

Definition at line 411 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Bookname, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

SetBookname() [3/3]

CCdd_book_ref_Base::TBookname & CCdd_book_ref_Base::SetBookname ( void  )

inline

Assign a value to Bookname data member.

Returns

Reference to the data value.

Definition at line 418 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetBookname(), CCdd_book_ref_Base::m_Bookname, CCdd_book_ref_Base::m_set_State, and CSerialObject::UnassignedString().

SetBsannot() [1/2]

void CFeature_evidence_Base::SetBsannot

(

CFeature_evidence_Base::TBsannot &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 161 of file Feature_evidence_.cpp.

References CObject::AddReference(), CFeature_evidence_Base::e_Bsannot, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, CFeature_evidence_Base::ResetSelection(), and rapidjson::value.

SetBsannot() [2/2]

CFeature_evidence_Base::TBsannot & CFeature_evidence_Base::SetBsannot

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 155 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Bsannot, eDoNotResetVariant, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::Select().

SetCategory() [1/2]

void CCdd_descr_Base::SetCategory

(

const TCategory &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 230 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Category, eDoNotResetVariant, CCdd_descr_Base::m_string, CCdd_descr_Base::Select(), and rapidjson::value.

SetCategory() [2/2]

CCdd_descr_Base::TCategory & CCdd_descr_Base::SetCategory ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 806 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Category, eDoNotResetVariant, CCdd_descr_Base::m_string, and CCdd_descr_Base::Select().

SetCdAccession() [1/3]

void CSequence_tree_Base::SetCdAccession ( const TCdAccession &  value )

inline

Assign a value to CdAccession data member.

Parameters

value

Value to assign

Definition at line 309 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_CdAccession, CSequence_tree_Base::m_set_State, and rapidjson::value.

SetCdAccession() [2/3]

void CSequence_tree_Base::SetCdAccession ( CSequence_tree_Base::TCdAccession &&  value )

inline

Definition at line 316 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_CdAccession, CSequence_tree_Base::m_set_State, and rapidjson::value.

SetCdAccession() [3/3]

CSequence_tree_Base::TCdAccession & CSequence_tree_Base::SetCdAccession ( void  )

inline

Assign a value to CdAccession data member.

Returns

Reference to the data value.

Definition at line 323 of file Sequence_tree_.hpp.

References CSequence_tree_Base::IsSetCdAccession(), CSequence_tree_Base::m_CdAccession, CSequence_tree_Base::m_set_State, and CSerialObject::UnassignedString().

SetCdcolor()

CCdd_Project_Base::TCdcolor & CCdd_Project_Base::SetCdcolor ( void  )

inline

Assign a value to Cdcolor data member.

Returns

Reference to the data value.

Definition at line 550 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Cdcolor, and CCdd_Project_Base::m_set_State.

SetCds()

CCdd_Project_Base::TCds & CCdd_Project_Base::SetCds ( void  )

inline

Assign a value to Cds data member.

Returns

Reference to the data value.

Definition at line 525 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Cds, and CCdd_Project_Base::m_set_State.

SetCelementid() [1/3]

void CCdd_book_ref_Base::SetCelementid ( const TCelementid &  value )

inline

Assign a value to Celementid data member.

Parameters

value

Value to assign

Definition at line 592 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Celementid, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetCelementid() [2/3]

void CCdd_book_ref_Base::SetCelementid ( CCdd_book_ref_Base::TCelementid &&  value )

inline

Definition at line 599 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Celementid, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

SetCelementid() [3/3]

CCdd_book_ref_Base::TCelementid & CCdd_book_ref_Base::SetCelementid ( void  )

inline

Assign a value to Celementid data member.

Returns

Reference to the data value.

Definition at line 606 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetCelementid(), CCdd_book_ref_Base::m_Celementid, CCdd_book_ref_Base::m_set_State, and CSerialObject::UnassignedString().

SetChildren() [1/7]

void CCdd_Base::SetChildren

(

CCdd_Base::TChildren &

value

)

Assign a value to Children data member.

Parameters

value

Reference to value.

Definition at line 253 of file Cdd_.cpp.

References CCdd_Base::m_Children, and rapidjson::value.

SetChildren() [2/7]

void CCdd_tree_Base::SetChildren

(

CCdd_tree_Base::TChildren &

value

)

Assign a value to Children data member.

Parameters

value

Reference to value.

Definition at line 112 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Children, and rapidjson::value.

SetChildren() [3/7]

void CSeqTree_node_Base::SetChildren

(

CSeqTree_node_Base::TChildren &

value

)

Assign a value to Children data member.

Parameters

value

Reference to value.

Definition at line 216 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::m_Children, and rapidjson::value.

Referenced by SeqTreeAsnizer::addAsnSeqTreeNode(), SeqTreeAsnizer::addChildNode(), SeqTreeAsnizer::convertToSeqTree(), and SeqTreeAsnizer::fillAsnSeqTreeNode().

SetChildren() [4/7]

CCdd_Base::TChildren & CCdd_Base::SetChildren

(

void

)

Assign a value to Children data member.

Returns

Reference to the data value.

Definition at line 258 of file Cdd_.cpp.

References CCdd_Base::m_Children.

SetChildren() [5/7]

CCdd_tree_Base::TChildren & CCdd_tree_Base::SetChildren

(

void

)

Assign a value to Children data member.

Returns

Reference to the data value.

Definition at line 117 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Children.

SetChildren() [6/7]

CSeqTree_node_Base::C_Children::TChildren & CSeqTree_node_Base::C_Children::SetChildren ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 715 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::e_Children, eDoNotResetVariant, CSeqTree_node_Base::C_Children::m_Children, and CSeqTree_node_Base::C_Children::Select().

SetChildren() [7/7]

CSeqTree_node_Base::TChildren & CSeqTree_node_Base::SetChildren ( void  )

inline

Assign a value to Children data member.

Returns

Reference to the data value.

Definition at line 893 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::m_Children, and CSeqTree_node_Base::ResetChildren().

SetClustering_Method() [1/2]

void CAlgorithm_type_Base::SetClustering_Method ( CAlgorithm_type_Base::TClustering_Method  value )

inline

Assign a value to Clustering_Method data member.

Parameters

value

Value to assign

Definition at line 649 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Clustering_Method, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetClustering_Method() [2/2]

CAlgorithm_type_Base::TClustering_Method & CAlgorithm_type_Base::SetClustering_Method ( void  )

inline

Assign a value to Clustering_Method data member.

Returns

Reference to the data value.

Definition at line 656 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetClustering_Method(), CAlgorithm_type_Base::m_Clustering_Method, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetColoring_scope() [1/2]

void CAlgorithm_type_Base::SetColoring_scope ( CAlgorithm_type_Base::TColoring_scope  value )

inline

Assign a value to Coloring_scope data member.

Parameters

value

Value to assign

Definition at line 1025 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Coloring_scope, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetColoring_scope() [2/2]

CAlgorithm_type_Base::TColoring_scope & CAlgorithm_type_Base::SetColoring_scope ( void  )

inline

Assign a value to Coloring_scope data member.

Returns

Reference to the data value.

Definition at line 1032 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetColoring_scope(), CAlgorithm_type_Base::m_Coloring_scope, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetColumns()

CMatrix_Base::TColumns & CMatrix_Base::SetColumns ( void  )

inline

Assign a value to Columns data member.

Returns

Reference to the data value.

Definition at line 495 of file Matrix_.hpp.

References CMatrix_Base::m_Columns, and CMatrix_Base::m_set_State.

SetCommands() [1/3]

void CCdd_Script_Base::SetCommands ( const TCommands &  value )

inline

Assign a value to Commands data member.

Parameters

value

Value to assign

Definition at line 367 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_Commands, CCdd_Script_Base::m_set_State, and rapidjson::value.

SetCommands() [2/3]

void CCdd_Script_Base::SetCommands ( CCdd_Script_Base::TCommands &&  value )

inline

Definition at line 374 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_Commands, CCdd_Script_Base::m_set_State, and rapidjson::value.

SetCommands() [3/3]

CCdd_Script_Base::TCommands & CCdd_Script_Base::SetCommands ( void  )

inline

Assign a value to Commands data member.

Returns

Reference to the data value.

Definition at line 381 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetCommands(), CCdd_Script_Base::m_Commands, CCdd_Script_Base::m_set_State, and CSerialObject::UnassignedString().

SetComment() [1/6]

void CCdd_descr_Base::SetComment

(

const TComment &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 236 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Comment, eDoNotResetVariant, CCdd_descr_Base::m_string, CCdd_descr_Base::Select(), and rapidjson::value.

SetComment() [2/6]

void CFeature_evidence_Base::SetComment

(

const TComment &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 121 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Comment, eDoNotResetVariant, CFeature_evidence_Base::m_string, CFeature_evidence_Base::Select(), and rapidjson::value.

SetComment() [3/6]

void CUpdate_comment_Base::SetComment

(

const TComment &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 119 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Comment, eDoNotResetVariant, CUpdate_comment_Base::m_string, CUpdate_comment_Base::Select(), and rapidjson::value.

SetComment() [4/6]

CCdd_descr_Base::TComment & CCdd_descr_Base::SetComment ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 826 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Comment, eDoNotResetVariant, CCdd_descr_Base::m_string, and CCdd_descr_Base::Select().

SetComment() [5/6]

CFeature_evidence_Base::TComment & CFeature_evidence_Base::SetComment ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 364 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::e_Comment, eDoNotResetVariant, CFeature_evidence_Base::m_string, and CFeature_evidence_Base::Select().

SetComment() [6/6]

CUpdate_comment_Base::TComment & CUpdate_comment_Base::SetComment ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 366 of file Update_comment_.hpp.

References CUpdate_comment_Base::e_Comment, eDoNotResetVariant, CUpdate_comment_Base::m_string, and CUpdate_comment_Base::Select().

Referenced by StructureSet::RejectAndPurgeSequence(), and UpdateViewer::SaveAlignments().

SetCount() [1/2]

void CCdd_repeat_Base::SetCount ( CCdd_repeat_Base::TCount  value )

inline

Assign a value to Count data member.

Parameters

value

Value to assign

Definition at line 271 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::m_Count, CCdd_repeat_Base::m_set_State, and rapidjson::value.

SetCount() [2/2]

CCdd_repeat_Base::TCount & CCdd_repeat_Base::SetCount ( void  )

inline

Assign a value to Count data member.

Returns

Reference to the data value.

Definition at line 278 of file Cdd_repeat_.hpp.

References CCdd_repeat_Base::IsSetCount(), CCdd_repeat_Base::m_Count, CCdd_repeat_Base::m_set_State, and CSerialObject::UnassignedByte().

SetCreate_date() [1/6]

void CCdd_descr_Base::SetCreate_date

(

CCdd_descr_Base::TCreate_date &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 276 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Create_date, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetCreate_date() [2/6]

void CCdd_pref_node_descr_Base::SetCreate_date

(

CCdd_pref_node_descr_Base::TCreate_date &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 115 of file Cdd_pref_node_descr_.cpp.

References CObject::AddReference(), CCdd_pref_node_descr_Base::e_Create_date, CCdd_pref_node_descr_Base::m_choice, CCdd_pref_node_descr_Base::m_object, CCdd_pref_node_descr_Base::ResetSelection(), and rapidjson::value.

SetCreate_date() [3/6]

void CCdd_Project_Base::SetCreate_date

(

CCdd_Project_Base::TCreate_date &

value

)

Assign a value to Create_date data member.

Parameters

value

Reference to value.

Definition at line 113 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Create_date, and rapidjson::value.

SetCreate_date() [4/6]

CCdd_descr_Base::TCreate_date & CCdd_descr_Base::SetCreate_date

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 270 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Create_date, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetCreate_date() [5/6]

CCdd_pref_node_descr_Base::TCreate_date & CCdd_pref_node_descr_Base::SetCreate_date

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 109 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::e_Create_date, eDoNotResetVariant, CCdd_pref_node_descr_Base::m_object, and CCdd_pref_node_descr_Base::Select().

SetCreate_date() [6/6]

CCdd_Project_Base::TCreate_date & CCdd_Project_Base::SetCreate_date

(

void

)

Assign a value to Create_date data member.

Returns

Reference to the data value.

Definition at line 118 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Create_date.

SetCsubelementid() [1/3]

void CCdd_book_ref_Base::SetCsubelementid ( const TCsubelementid &  value )

inline

Assign a value to Csubelementid data member.

Parameters

value

Value to assign

Definition at line 639 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Csubelementid, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetCsubelementid() [2/3]

void CCdd_book_ref_Base::SetCsubelementid ( CCdd_book_ref_Base::TCsubelementid &&  value )

inline

Definition at line 646 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Csubelementid, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

SetCsubelementid() [3/3]

CCdd_book_ref_Base::TCsubelementid & CCdd_book_ref_Base::SetCsubelementid ( void  )

inline

Assign a value to Csubelementid data member.

Returns

Reference to the data value.

Definition at line 653 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetCsubelementid(), CCdd_book_ref_Base::m_Csubelementid, CCdd_book_ref_Base::m_set_State, and CSerialObject::UnassignedString().

SetCTerminalExt() [1/2]

void CAlgorithm_type_Base::SetCTerminalExt ( CAlgorithm_type_Base::TCTerminalExt  value )

inline

Assign a value to CTerminalExt data member.

Parameters

value

Value to assign

Definition at line 931 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_CTerminalExt, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetCTerminalExt() [2/2]

CAlgorithm_type_Base::TCTerminalExt & CAlgorithm_type_Base::SetCTerminalExt ( void  )

inline

Assign a value to CTerminalExt data member.

Returns

Reference to the data value.

Definition at line 938 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetCTerminalExt(), CAlgorithm_type_Base::m_CTerminalExt, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetCtrl() [1/2]

void CCdd_Viewer_Base::SetCtrl ( CCdd_Viewer_Base::TCtrl  value )

inline

Assign a value to Ctrl data member.

Parameters

value

Value to assign

Definition at line 286 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::m_Ctrl, CCdd_Viewer_Base::m_set_State, and rapidjson::value.

SetCtrl() [2/2]

CCdd_Viewer_Base::TCtrl & CCdd_Viewer_Base::SetCtrl ( void  )

inline

Assign a value to Ctrl data member.

Returns

Reference to the data value.

Definition at line 293 of file Cdd_Viewer_.hpp.

References CCdd_Viewer_Base::IsSetCtrl(), CCdd_Viewer_Base::m_Ctrl, CCdd_Viewer_Base::m_set_State, and CSerialObject::UnassignedByte().

SetCuration_status() [1/2]

void CCdd_descr_Base::SetCuration_status ( CCdd_descr_Base::TCuration_status  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 962 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Curation_status, eDoNotResetVariant, CCdd_descr_Base::m_Curation_status, CCdd_descr_Base::Select(), and rapidjson::value.

SetCuration_status() [2/2]

CCdd_descr_Base::TCuration_status & CCdd_descr_Base::SetCuration_status ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 955 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Curation_status, eDoNotResetVariant, CCdd_descr_Base::m_Curation_status, and CCdd_descr_Base::Select().

SetDatabase() [1/3]

void CGlobal_id_Base::SetDatabase ( const TDatabase &  value )

inline

Assign a value to Database data member.

Parameters

value

Value to assign

Definition at line 456 of file Global_id_.hpp.

References CGlobal_id_Base::m_Database, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetDatabase() [2/3]

void CGlobal_id_Base::SetDatabase ( CGlobal_id_Base::TDatabase &&  value )

inline

Definition at line 463 of file Global_id_.hpp.

References CGlobal_id_Base::m_Database, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetDatabase() [3/3]

CGlobal_id_Base::TDatabase & CGlobal_id_Base::SetDatabase ( void  )

inline

Assign a value to Database data member.

Returns

Reference to the data value.

Definition at line 470 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetDatabase(), CGlobal_id_Base::m_Database, CGlobal_id_Base::m_set_State, and CSerialObject::UnassignedString().

SetDefaultActive()

void CCdd_org_ref_Base::SetDefaultActive ( void  )

inline

Assign default value to Active data member.

Definition at line 336 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::ResetActive().

SetDefaultIsAnnotated() [1/2]

void CSeqTree_node_Base::SetDefaultIsAnnotated ( void  )

inline

Assign default value to IsAnnotated data member.

Definition at line 747 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::ResetIsAnnotated().

SetDefaultIsAnnotated() [2/2]

void CSequence_tree_Base::SetDefaultIsAnnotated ( void  )

inline

Assign default value to IsAnnotated data member.

Definition at line 384 of file Sequence_tree_.hpp.

References CSequence_tree_Base::ResetIsAnnotated().

SetDescription() [1/13]

void CAlign_annot_Base::SetDescription ( const TDescription &  value )

inline

Assign a value to Description data member.

Parameters

value

Value to assign

Definition at line 468 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Description, CAlign_annot_Base::m_set_State, and rapidjson::value.

Referenced by CDDAnnotateDialog::EditAnnotation().

SetDescription() [2/13]

void CCdd_pref_node_descr_Base::SetDescription

(

const TDescription &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 125 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::e_Description, eDoNotResetVariant, CCdd_pref_node_descr_Base::m_string, CCdd_pref_node_descr_Base::Select(), and rapidjson::value.

SetDescription() [3/13]

void CAlign_annot_Base::SetDescription ( CAlign_annot_Base::TDescription &&  value )

inline

Definition at line 475 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Description, CAlign_annot_Base::m_set_State, and rapidjson::value.

SetDescription() [4/13]

void CCdd_Base::SetDescription

(

CCdd_Base::TDescription &

value

)

Assign a value to Description data member.

Parameters

value

Reference to value.

Definition at line 94 of file Cdd_.cpp.

References CCdd_Base::m_Description, and rapidjson::value.

Referenced by ASNDataManager::GetCDDDescrSet(), PssmMaker::modifyQuery(), ResetFields(), ASNDataManager::SetCDDDescription(), ASNDataManager::SetCDDNotes(), SetCreationDate(), and SetUpdateDate().

SetDescription() [5/13]

void CCdd_pref_nodes_Base::SetDescription

(

CCdd_pref_nodes_Base::TDescription &

value

)

Assign a value to Description data member.

Parameters

value

Reference to value.

Definition at line 105 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Description, and rapidjson::value.

SetDescription() [6/13]

void CCdd_tree_Base::SetDescription

(

CCdd_tree_Base::TDescription &

value

)

Assign a value to Description data member.

Parameters

value

Reference to value.

Definition at line 78 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Description, and rapidjson::value.

SetDescription() [7/13]

CAlign_annot_Base::TDescription & CAlign_annot_Base::SetDescription ( void  )

inline

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 482 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetDescription(), CAlign_annot_Base::m_Description, CAlign_annot_Base::m_set_State, and CSerialObject::UnassignedString().

SetDescription() [8/13]

CCdd_Base::TDescription & CCdd_Base::SetDescription

(

void

)

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 99 of file Cdd_.cpp.

References CCdd_Base::m_Description.

Referenced by CCdCore::AddCddDescr(), CCdCore::RemoveCddDescrsOfType(), CCdCore::SetComment(), and CCdFromFasta::UpdateSourceId().

SetDescription() [9/13]

CCdd_pref_node_descr_Base::TDescription & CCdd_pref_node_descr_Base::SetDescription ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 283 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::e_Description, eDoNotResetVariant, CCdd_pref_node_descr_Base::m_string, and CCdd_pref_node_descr_Base::Select().

SetDescription() [10/13]

CCdd_pref_nodes_Base::TDescription & CCdd_pref_nodes_Base::SetDescription

(

void

)

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 110 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Description.

SetDescription() [11/13]

CCdd_tree_Base::TDescription & CCdd_tree_Base::SetDescription

(

void

)

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 83 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Description.

SetDescription() [12/13]

CReject_id_Base::TDescription & CReject_id_Base::SetDescription ( void  )

inline

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 209 of file Reject_id_.hpp.

References CReject_id_Base::m_Description, and CReject_id_Base::m_set_State.

Referenced by StructureSet::RejectAndPurgeSequence().

SetDescription() [13/13]

CUpdate_align_Base::TDescription & CUpdate_align_Base::SetDescription ( void  )

inline

Assign a value to Description data member.

Returns

Reference to the data value.

Definition at line 271 of file Update_align_.hpp.

References CUpdate_align_Base::m_Description, and CUpdate_align_Base::m_set_State.

Referenced by UpdateViewer::SaveAlignments().

SetDistance() [1/4]

void CCdd_Base::SetDistance

(

CCdd_Base::TDistance &

value

)

Assign a value to Distance data member.

Parameters

value

Reference to value.

Definition at line 219 of file Cdd_.cpp.

References CCdd_Base::m_Distance, and rapidjson::value.

SetDistance() [2/4]

void CSeqTree_node_Base::SetDistance ( CSeqTree_node_Base::TDistance  value )

inline

Assign a value to Distance data member.

Parameters

value

Value to assign

Definition at line 853 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_Distance, CSeqTree_node_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::fillAsnSeqTreeNode().

SetDistance() [3/4]

CCdd_Base::TDistance & CCdd_Base::SetDistance

(

void

)

Assign a value to Distance data member.

Returns

Reference to the data value.

Definition at line 224 of file Cdd_.cpp.

References CCdd_Base::m_Distance.

SetDistance() [4/4]

CSeqTree_node_Base::TDistance & CSeqTree_node_Base::SetDistance ( void  )

inline

Assign a value to Distance data member.

Returns

Reference to the data value.

Definition at line 860 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetDistance(), CSeqTree_node_Base::m_Distance, CSeqTree_node_Base::m_set_State, and CSerialObject::UnassignedByte().

SetDiv_ranks()

CTriangle_Base::TDiv_ranks & CTriangle_Base::SetDiv_ranks ( void  )

inline

Assign a value to Div_ranks data member.

Returns

Reference to the data value.

Definition at line 326 of file Triangle_.hpp.

References CTriangle_Base::m_Div_ranks, and CTriangle_Base::m_set_State.

SetElementid() [1/2]

void CCdd_book_ref_Base::SetElementid ( CCdd_book_ref_Base::TElementid  value )

inline

Assign a value to Elementid data member.

Parameters

value

Value to assign

Definition at line 505 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_Elementid, CCdd_book_ref_Base::m_set_State, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetElementid() [2/2]

CCdd_book_ref_Base::TElementid & CCdd_book_ref_Base::SetElementid ( void  )

inline

Assign a value to Elementid data member.

Returns

Reference to the data value.

Definition at line 512 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetElementid(), CCdd_book_ref_Base::m_Elementid, CCdd_book_ref_Base::m_set_State, and CSerialObject::UnassignedByte().

SetEvidence()

CAlign_annot_Base::TEvidence & CAlign_annot_Base::SetEvidence ( void  )

inline

Assign a value to Evidence data member.

Returns

Reference to the data value.

Definition at line 512 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Evidence, and CAlign_annot_Base::m_set_State.

Referenced by CDDAnnotateDialog::DeleteEvidence(), CDDAnnotateDialog::MoveEvidence(), CDDAnnotateDialog::NewEvidence(), and CDDAnnotateDialog::SetupGUIControls().

SetFeatures() [1/2]

void CCdd_Base::SetFeatures

(

CCdd_Base::TFeatures &

value

)

Assign a value to Features data member.

Parameters

value

Reference to value.

Definition at line 117 of file Cdd_.cpp.

References CCdd_Base::m_Features, and rapidjson::value.

Referenced by ReorderStructureAlignments().

SetFeatures() [2/2]

CCdd_Base::TFeatures & CCdd_Base::SetFeatures

(

void

)

Assign a value to Features data member.

Returns

Reference to the data value.

Definition at line 122 of file Cdd_.cpp.

References CCdd_Base::m_Features.

SetFootprint() [1/2]

void CSeqTree_node_Base::C_Children::SetFootprint

(

TFootprint &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 164 of file SeqTree_node_.cpp.

References CObject::AddReference(), CSeqTree_node_Base::C_Children::e_Footprint, CSeqTree_node_Base::C_Children::m_choice, CSeqTree_node_Base::C_Children::m_object, CSeqTree_node_Base::C_Children::ResetSelection(), and rapidjson::value.

SetFootprint() [2/2]

CSeqTree_node_Base::C_Children::TFootprint & CSeqTree_node_Base::C_Children::SetFootprint

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 158 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::C_Children::e_Footprint, eDoNotResetVariant, CSeqTree_node_Base::C_Children::m_object, and CSeqTree_node_Base::C_Children::Select().

Referenced by SeqTreeAsnizer::fillAsnSeqTreeNode().

SetGapExtend() [1/2]

void CAlgorithm_type_Base::SetGapExtend ( CAlgorithm_type_Base::TGapExtend  value )

inline

Assign a value to GapExtend data member.

Parameters

value

Value to assign

Definition at line 790 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapExtend, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

SetGapExtend() [2/2]

CAlgorithm_type_Base::TGapExtend & CAlgorithm_type_Base::SetGapExtend ( void  )

inline

Assign a value to GapExtend data member.

Returns

Reference to the data value.

Definition at line 797 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapExtend(), CAlgorithm_type_Base::m_GapExtend, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetGapOpen() [1/2]

void CAlgorithm_type_Base::SetGapOpen ( CAlgorithm_type_Base::TGapOpen  value )

inline

Assign a value to GapOpen data member.

Parameters

value

Value to assign

Definition at line 743 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapOpen, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

SetGapOpen() [2/2]

CAlgorithm_type_Base::TGapOpen & CAlgorithm_type_Base::SetGapOpen ( void  )

inline

Assign a value to GapOpen data member.

Returns

Reference to the data value.

Definition at line 750 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapOpen(), CAlgorithm_type_Base::m_GapOpen, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetGapScaleFactor() [1/2]

void CAlgorithm_type_Base::SetGapScaleFactor ( CAlgorithm_type_Base::TGapScaleFactor  value )

inline

Assign a value to GapScaleFactor data member.

Parameters

value

Value to assign

Definition at line 837 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_GapScaleFactor, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

SetGapScaleFactor() [2/2]

CAlgorithm_type_Base::TGapScaleFactor & CAlgorithm_type_Base::SetGapScaleFactor ( void  )

inline

Assign a value to GapScaleFactor data member.

Returns

Reference to the data value.

Definition at line 844 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetGapScaleFactor(), CAlgorithm_type_Base::m_GapScaleFactor, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetGid() [1/2]

void CCdd_id_Base::SetGid

(

CCdd_id_Base::TGid &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 112 of file Cdd_id_.cpp.

References CObject::AddReference(), CCdd_id_Base::e_Gid, CCdd_id_Base::m_choice, CCdd_id_Base::m_object, CCdd_id_Base::ResetSelection(), and rapidjson::value.

SetGid() [2/2]

CCdd_id_Base::TGid & CCdd_id_Base::SetGid

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 106 of file Cdd_id_.cpp.

References CCdd_id_Base::e_Gid, eDoNotResetVariant, CCdd_id_Base::m_object, and CCdd_id_Base::Select().

Referenced by CSeqAnnotFromFasta::MakeSeqAnnotFromFasta(), CCdCore::SetAccession(), and CCdFromFasta::UpdateSourceId().

SetHeight() [1/2]

void CCdd_Viewer_Rect_Base::SetHeight ( CCdd_Viewer_Rect_Base::THeight  value )

inline

Assign a value to Height data member.

Parameters

value

Value to assign

Definition at line 451 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_Height, CCdd_Viewer_Rect_Base::m_set_State, and rapidjson::value.

SetHeight() [2/2]

CCdd_Viewer_Rect_Base::THeight & CCdd_Viewer_Rect_Base::SetHeight ( void  )

inline

Assign a value to Height data member.

Returns

Reference to the data value.

Definition at line 458 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetHeight(), CCdd_Viewer_Rect_Base::m_Height, CCdd_Viewer_Rect_Base::m_set_State, and CSerialObject::UnassignedByte().

SetId() [1/6]

void CCdd_Base::SetId

(

CCdd_Base::TId &

value

)

Assign a value to Id data member.

Parameters

value

Reference to value.

Definition at line 84 of file Cdd_.cpp.

References CCdd_Base::m_Id, and rapidjson::value.

Referenced by CSeqAnnotFromFasta::MakeSeqAnnotFromFasta(), and PssmMaker::modifyQuery().

SetId() [2/6]

void CCdd_Project_Base::SetId

(

CCdd_Project_Base::TId &

value

)

Assign a value to Id data member.

Parameters

value

Reference to value.

Definition at line 90 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Id, and rapidjson::value.

SetId() [3/6]

void CCdd_tree_Base::SetId

(

CCdd_tree_Base::TId &

value

)

Assign a value to Id data member.

Parameters

value

Reference to value.

Definition at line 68 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Id, and rapidjson::value.

SetId() [4/6]

CCdd_Base::TId & CCdd_Base::SetId ( void  )

inline

Assign a value to Id data member.

Returns

Reference to the data value.

Definition at line 1180 of file Cdd_.hpp.

References CCdd_Base::m_Id, and CCdd_Base::ResetId().

Referenced by CCdCore::EraseUID(), and CCdCore::SetAccession().

SetId() [5/6]

CCdd_Project_Base::TId & CCdd_Project_Base::SetId

(

void

)

Assign a value to Id data member.

Returns

Reference to the data value.

Definition at line 95 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Id.

SetId() [6/6]

CCdd_tree_Base::TId & CCdd_tree_Base::SetId ( void  )

inline

Assign a value to Id data member.

Returns

Reference to the data value.

Definition at line 485 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Id, and CCdd_tree_Base::ResetId().

SetIds()

CReject_id_Base::TIds & CReject_id_Base::SetIds ( void  )

inline

Assign a value to Ids data member.

Returns

Reference to the data value.

Definition at line 234 of file Reject_id_.hpp.

References CReject_id_Base::m_Ids, and CReject_id_Base::m_set_State.

Referenced by StructureSet::RejectAndPurgeSequence().

SetIsAnnotated() [1/4]

void CSeqTree_node_Base::SetIsAnnotated ( CSeqTree_node_Base::TIsAnnotated  value )

inline

Assign a value to IsAnnotated data member.

Parameters

value

Value to assign

Definition at line 759 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_IsAnnotated, CSeqTree_node_Base::m_set_State, and rapidjson::value.

SetIsAnnotated() [2/4]

void CSequence_tree_Base::SetIsAnnotated ( CSequence_tree_Base::TIsAnnotated  value )

inline

Assign a value to IsAnnotated data member.

Parameters

value

Value to assign

Definition at line 396 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_IsAnnotated, CSequence_tree_Base::m_set_State, and rapidjson::value.

SetIsAnnotated() [3/4]

CSeqTree_node_Base::TIsAnnotated & CSeqTree_node_Base::SetIsAnnotated ( void  )

inline

Assign a value to IsAnnotated data member.

Returns

Reference to the data value.

Definition at line 766 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetIsAnnotated(), CSeqTree_node_Base::m_IsAnnotated, CSeqTree_node_Base::m_set_State, and CSerialObject::UnassignedByte().

SetIsAnnotated() [4/4]

CSequence_tree_Base::TIsAnnotated & CSequence_tree_Base::SetIsAnnotated ( void  )

inline

Assign a value to IsAnnotated data member.

Returns

Reference to the data value.

Definition at line 403 of file Sequence_tree_.hpp.

References CSequence_tree_Base::IsSetIsAnnotated(), CSequence_tree_Base::m_IsAnnotated, CSequence_tree_Base::m_set_State, and CSerialObject::UnassignedByte().

SetLeft() [1/2]

void CCdd_Viewer_Rect_Base::SetLeft ( CCdd_Viewer_Rect_Base::TLeft  value )

inline

Assign a value to Left data member.

Parameters

value

Value to assign

Definition at line 357 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_Left, CCdd_Viewer_Rect_Base::m_set_State, and rapidjson::value.

SetLeft() [2/2]

CCdd_Viewer_Rect_Base::TLeft & CCdd_Viewer_Rect_Base::SetLeft ( void  )

inline

Assign a value to Left data member.

Returns

Reference to the data value.

Definition at line 364 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetLeft(), CCdd_Viewer_Rect_Base::m_Left, CCdd_Viewer_Rect_Base::m_set_State, and CSerialObject::UnassignedByte().

SetLocation() [1/4]

void CAlign_annot_Base::SetLocation

(

CAlign_annot_Base::TLocation &

value

)

Assign a value to Location data member.

Parameters

value

Reference to value.

Definition at line 61 of file Align_annot_.cpp.

References CAlign_annot_Base::m_Location, and rapidjson::value.

Referenced by CDDAnnotateDialog::EditAnnotation(), IBISAnnotateDialog::HighlightAnnotation(), CDDAnnotateDialog::HighlightAnnotation(), and CDDAnnotateDialog::NewOrEditMotif().

SetLocation() [2/4]

void CCdd_repeat_Base::SetLocation

(

CCdd_repeat_Base::TLocation &

value

)

Assign a value to Location data member.

Parameters

value

Reference to value.

Definition at line 56 of file Cdd_repeat_.cpp.

References CCdd_repeat_Base::m_Location, and rapidjson::value.

SetLocation() [3/4]

CAlign_annot_Base::TLocation & CAlign_annot_Base::SetLocation ( void  )

inline

Assign a value to Location data member.

Returns

Reference to the data value.

Definition at line 438 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Location, and CAlign_annot_Base::ResetLocation().

SetLocation() [4/4]

CCdd_repeat_Base::TLocation & CCdd_repeat_Base::SetLocation

(

void

)

Assign a value to Location data member.

Returns

Reference to the data value.

Definition at line 61 of file Cdd_repeat_.cpp.

References CCdd_repeat_Base::m_Location.

SetLog() [1/3]

void CCdd_Project_Base::SetLog ( const TLog &  value )

inline

Assign a value to Log data member.

Parameters

value

Value to assign

Definition at line 603 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Log, CCdd_Project_Base::m_set_State, and rapidjson::value.

SetLog() [2/3]

void CCdd_Project_Base::SetLog ( CCdd_Project_Base::TLog &&  value )

inline

Definition at line 610 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Log, CCdd_Project_Base::m_set_State, and rapidjson::value.

SetLog() [3/3]

CCdd_Project_Base::TLog & CCdd_Project_Base::SetLog ( void  )

inline

Assign a value to Log data member.

Returns

Reference to the data value.

Definition at line 617 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetLog(), CCdd_Project_Base::m_Log, CCdd_Project_Base::m_set_State, and CSerialObject::UnassignedString().

SetMaster3d()

CCdd_Base::TMaster3d & CCdd_Base::SetMaster3d ( void  )

inline

Assign a value to Master3d data member.

Returns

Reference to the data value.

Definition at line 1534 of file Cdd_.hpp.

References CCdd_Base::m_Master3d, and CCdd_Base::m_set_State.

Referenced by ReMasterCdWithoutUnifiedBlocks(), and CCdCore::SynchronizeMaster3D().

SetModel_organisms() [1/2]

void CCdd_pref_nodes_Base::SetModel_organisms

(

CCdd_pref_nodes_Base::TModel_organisms &

value

)

Assign a value to Model_organisms data member.

Parameters

value

Reference to value.

Definition at line 71 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Model_organisms, and rapidjson::value.

SetModel_organisms() [2/2]

CCdd_pref_nodes_Base::TModel_organisms & CCdd_pref_nodes_Base::SetModel_organisms

(

void

)

Assign a value to Model_organisms data member.

Returns

Reference to the data value.

Definition at line 76 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Model_organisms.

SetMotif() [1/3]

void CAlign_annot_Base::SetMotif ( const TMotif &  value )

inline

Assign a value to Motif data member.

Parameters

value

Value to assign

Definition at line 612 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Motif, CAlign_annot_Base::m_set_State, and rapidjson::value.

Referenced by CDDAnnotateDialog::NewOrEditMotif().

SetMotif() [2/3]

void CAlign_annot_Base::SetMotif ( CAlign_annot_Base::TMotif &&  value )

inline

Definition at line 619 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Motif, CAlign_annot_Base::m_set_State, and rapidjson::value.

SetMotif() [3/3]

CAlign_annot_Base::TMotif & CAlign_annot_Base::SetMotif ( void  )

inline

Assign a value to Motif data member.

Returns

Reference to the data value.

Definition at line 626 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetMotif(), CAlign_annot_Base::m_Motif, CAlign_annot_Base::m_set_State, and CSerialObject::UnassignedString().

SetMotifuse() [1/2]

void CAlign_annot_Base::SetMotifuse ( CAlign_annot_Base::TMotifuse  value )

inline

Assign a value to Motifuse data member.

Parameters

value

Value to assign

Definition at line 666 of file Align_annot_.hpp.

References CAlign_annot_Base::m_Motifuse, CAlign_annot_Base::m_set_State, and rapidjson::value.

Referenced by CDDAnnotateDialog::NewOrEditMotif().

SetMotifuse() [2/2]

CAlign_annot_Base::TMotifuse & CAlign_annot_Base::SetMotifuse ( void  )

inline

Assign a value to Motifuse data member.

Returns

Reference to the data value.

Definition at line 673 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetMotifuse(), CAlign_annot_Base::m_Motifuse, CAlign_annot_Base::m_set_State, and CSerialObject::UnassignedByte().

SetName() [1/12]

void CCdd_Base::SetName ( const TName &  value )

inline

Assign a value to Name data member.

Parameters

value

Value to assign

Definition at line 1133 of file Cdd_.hpp.

References CCdd_Base::m_Name, CCdd_Base::m_set_State, and rapidjson::value.

Referenced by CSeqAnnotFromFasta::MakeSeqAnnotFromFasta(), and ASNDataManager::SetCDDName().

SetName() [2/12]

void CCdd_Script_Base::SetName ( const TName &  value )

inline

Assign a value to Name data member.

Parameters

value

Value to assign

Definition at line 320 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_Name, CCdd_Script_Base::m_set_State, and rapidjson::value.

SetName() [3/12]

void CCdd_tree_Base::SetName ( const TName &  value )

inline

Assign a value to Name data member.

Parameters

value

Value to assign

Definition at line 438 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Name, CCdd_tree_Base::m_set_State, and rapidjson::value.

SetName() [4/12]

void CSeqTree_node_Base::SetName ( const TName &  value )

inline

Assign a value to Name data member.

Parameters

value

Value to assign

Definition at line 799 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_Name, CSeqTree_node_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::fillAsnSeqTreeNode().

SetName() [5/12]

void CCdd_Base::SetName ( CCdd_Base::TName &&  value )

inline

Definition at line 1140 of file Cdd_.hpp.

References CCdd_Base::m_Name, CCdd_Base::m_set_State, and rapidjson::value.

SetName() [6/12]

void CCdd_Script_Base::SetName ( CCdd_Script_Base::TName &&  value )

inline

Definition at line 327 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_Name, CCdd_Script_Base::m_set_State, and rapidjson::value.

SetName() [7/12]

void CCdd_tree_Base::SetName ( CCdd_tree_Base::TName &&  value )

inline

Definition at line 445 of file Cdd_tree_.hpp.

References CCdd_tree_Base::m_Name, CCdd_tree_Base::m_set_State, and rapidjson::value.

SetName() [8/12]

void CSeqTree_node_Base::SetName ( CSeqTree_node_Base::TName &&  value )

inline

Definition at line 806 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_Name, CSeqTree_node_Base::m_set_State, and rapidjson::value.

SetName() [9/12]

CCdd_Base::TName & CCdd_Base::SetName ( void  )

inline

Assign a value to Name data member.

Returns

Reference to the data value.

Definition at line 1147 of file Cdd_.hpp.

References CCdd_Base::IsSetName(), CCdd_Base::m_Name, CCdd_Base::m_set_State, and CSerialObject::UnassignedString().

Referenced by CCdFromFasta::InitializeParameters().

SetName() [10/12]

CCdd_Script_Base::TName & CCdd_Script_Base::SetName ( void  )

inline

Assign a value to Name data member.

Returns

Reference to the data value.

Definition at line 334 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetName(), CCdd_Script_Base::m_Name, CCdd_Script_Base::m_set_State, and CSerialObject::UnassignedString().

SetName() [11/12]

CCdd_tree_Base::TName & CCdd_tree_Base::SetName ( void  )

inline

Assign a value to Name data member.

Returns

Reference to the data value.

Definition at line 452 of file Cdd_tree_.hpp.

References CCdd_tree_Base::IsSetName(), CCdd_tree_Base::m_Name, CCdd_tree_Base::m_set_State, and CSerialObject::UnassignedString().

SetName() [12/12]

CSeqTree_node_Base::TName & CSeqTree_node_Base::SetName ( void  )

inline

Assign a value to Name data member.

Returns

Reference to the data value.

Definition at line 813 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::IsSetName(), CSeqTree_node_Base::m_Name, CSeqTree_node_Base::m_set_State, and CSerialObject::UnassignedString().

SetNcolumns() [1/2]

void CMatrix_Base::SetNcolumns ( CMatrix_Base::TNcolumns  value )

inline

Assign a value to Ncolumns data member.

Parameters

value

Value to assign

Definition at line 339 of file Matrix_.hpp.

References CMatrix_Base::m_Ncolumns, CMatrix_Base::m_set_State, and rapidjson::value.

SetNcolumns() [2/2]

CMatrix_Base::TNcolumns & CMatrix_Base::SetNcolumns ( void  )

inline

Assign a value to Ncolumns data member.

Returns

Reference to the data value.

Definition at line 346 of file Matrix_.hpp.

References CMatrix_Base::IsSetNcolumns(), CMatrix_Base::m_Ncolumns, CMatrix_Base::m_set_State, and CSerialObject::UnassignedByte().

SetNeighbors() [1/4]

void CCdd_Base::SetNeighbors

(

CCdd_Base::TNeighbors &

value

)

Assign a value to Neighbors data member.

Parameters

value

Reference to value.

Definition at line 287 of file Cdd_.cpp.

References CCdd_Base::m_Neighbors, and rapidjson::value.

SetNeighbors() [2/4]

void CCdd_tree_Base::SetNeighbors

(

CCdd_tree_Base::TNeighbors &

value

)

Assign a value to Neighbors data member.

Parameters

value

Reference to value.

Definition at line 146 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Neighbors, and rapidjson::value.

SetNeighbors() [3/4]

CCdd_Base::TNeighbors & CCdd_Base::SetNeighbors

(

void

)

Assign a value to Neighbors data member.

Returns

Reference to the data value.

Definition at line 292 of file Cdd_.cpp.

References CCdd_Base::m_Neighbors.

SetNeighbors() [4/4]

CCdd_tree_Base::TNeighbors & CCdd_tree_Base::SetNeighbors

(

void

)

Assign a value to Neighbors data member.

Returns

Reference to the data value.

Definition at line 151 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Neighbors.

SetNelements() [1/2]

void CTriangle_Base::SetNelements ( CTriangle_Base::TNelements  value )

inline

Assign a value to Nelements data member.

Parameters

value

Value to assign

Definition at line 268 of file Triangle_.hpp.

References CTriangle_Base::m_Nelements, CTriangle_Base::m_set_State, and rapidjson::value.

SetNelements() [2/2]

CTriangle_Base::TNelements & CTriangle_Base::SetNelements ( void  )

inline

Assign a value to Nelements data member.

Returns

Reference to the data value.

Definition at line 275 of file Triangle_.hpp.

References CTriangle_Base::IsSetNelements(), CTriangle_Base::m_Nelements, CTriangle_Base::m_set_State, and CSerialObject::UnassignedByte().

SetNote() [1/3]

void CNode_annotation_Base::SetNote ( const TNote &  value )

inline

Assign a value to Note data member.

Parameters

value

Value to assign

Definition at line 268 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_Note, CNode_annotation_Base::m_set_State, and rapidjson::value.

SetNote() [2/3]

void CNode_annotation_Base::SetNote ( CNode_annotation_Base::TNote &&  value )

inline

Definition at line 275 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_Note, CNode_annotation_Base::m_set_State, and rapidjson::value.

SetNote() [3/3]

CNode_annotation_Base::TNote & CNode_annotation_Base::SetNote ( void  )

inline

Assign a value to Note data member.

Returns

Reference to the data value.

Definition at line 282 of file Node_annotation_.hpp.

References CNode_annotation_Base::IsSetNote(), CNode_annotation_Base::m_Note, CNode_annotation_Base::m_set_State, and CSerialObject::UnassignedString().

SetNrows() [1/2]

void CMatrix_Base::SetNrows ( CMatrix_Base::TNrows  value )

inline

Assign a value to Nrows data member.

Parameters

value

Value to assign

Definition at line 386 of file Matrix_.hpp.

References CMatrix_Base::m_Nrows, CMatrix_Base::m_set_State, and rapidjson::value.

SetNrows() [2/2]

CMatrix_Base::TNrows & CMatrix_Base::SetNrows ( void  )

inline

Assign a value to Nrows data member.

Returns

Reference to the data value.

Definition at line 393 of file Matrix_.hpp.

References CMatrix_Base::IsSetNrows(), CMatrix_Base::m_Nrows, CMatrix_Base::m_set_State, and CSerialObject::UnassignedByte().

SetNTerminalExt() [1/2]

void CAlgorithm_type_Base::SetNTerminalExt ( CAlgorithm_type_Base::TNTerminalExt  value )

inline

Assign a value to NTerminalExt data member.

Parameters

value

Value to assign

Definition at line 884 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_NTerminalExt, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetNTerminalExt() [2/2]

CAlgorithm_type_Base::TNTerminalExt & CAlgorithm_type_Base::SetNTerminalExt ( void  )

inline

Assign a value to NTerminalExt data member.

Returns

Reference to the data value.

Definition at line 891 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetNTerminalExt(), CAlgorithm_type_Base::m_NTerminalExt, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetOld_root() [1/2]

void CCdd_descr_Base::SetOld_root

(

CCdd_descr_Base::TOld_root &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 392 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Old_root, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetOld_root() [2/2]

CCdd_descr_Base::TOld_root & CCdd_descr_Base::SetOld_root

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 386 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Old_root, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetOptional_nodes() [1/2]

void CCdd_pref_nodes_Base::SetOptional_nodes

(

CCdd_pref_nodes_Base::TOptional_nodes &

value

)

Assign a value to Optional_nodes data member.

Parameters

value

Reference to value.

Definition at line 88 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Optional_nodes, and rapidjson::value.

SetOptional_nodes() [2/2]

CCdd_pref_nodes_Base::TOptional_nodes & CCdd_pref_nodes_Base::SetOptional_nodes

(

void

)

Assign a value to Optional_nodes data member.

Returns

Reference to the data value.

Definition at line 93 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Optional_nodes.

SetOthername() [1/2]

void CCdd_descr_Base::SetOthername

(

const TOthername &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 224 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Othername, eDoNotResetVariant, CCdd_descr_Base::m_string, CCdd_descr_Base::Select(), and rapidjson::value.

SetOthername() [2/2]

CCdd_descr_Base::TOthername & CCdd_descr_Base::SetOthername ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 786 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Othername, eDoNotResetVariant, CCdd_descr_Base::m_string, and CCdd_descr_Base::Select().

SetParent() [1/4]

void CCdd_Base::SetParent

(

CCdd_Base::TParent &

value

)

Assign a value to Parent data member.

Parameters

value

Reference to value.

Definition at line 236 of file Cdd_.cpp.

References CCdd_Base::m_Parent, and rapidjson::value.

SetParent() [2/4]

void CCdd_tree_Base::SetParent

(

CCdd_tree_Base::TParent &

value

)

Assign a value to Parent data member.

Parameters

value

Reference to value.

Definition at line 95 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Parent, and rapidjson::value.

SetParent() [3/4]

CCdd_Base::TParent & CCdd_Base::SetParent

(

void

)

Assign a value to Parent data member.

Returns

Reference to the data value.

Definition at line 241 of file Cdd_.cpp.

References CCdd_Base::m_Parent.

SetParent() [4/4]

CCdd_tree_Base::TParent & CCdd_tree_Base::SetParent

(

void

)

Assign a value to Parent data member.

Returns

Reference to the data value.

Definition at line 100 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Parent.

SetParent_tax_id() [1/2]

void CCdd_org_ref_Base::SetParent_tax_id ( CCdd_org_ref_Base::TParent_tax_id  value )

inline

Assign a value to Parent_tax_id data member.

Parameters

value

Value to assign

Definition at line 395 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Parent_tax_id, CCdd_org_ref_Base::m_set_State, and rapidjson::value.

SetParent_tax_id() [2/2]

CCdd_org_ref_Base::TParent_tax_id & CCdd_org_ref_Base::SetParent_tax_id ( void  )

inline

Assign a value to Parent_tax_id data member.

Returns

Reference to the data value.

Definition at line 402 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::IsSetParent_tax_id(), CCdd_org_ref_Base::m_Parent_tax_id, CCdd_org_ref_Base::m_set_State, and CSerialObject::UnassignedByte().

SetParent_type() [1/2]

void CDomain_parent_Base::SetParent_type ( CDomain_parent_Base::TParent_type  value )

inline

Assign a value to Parent_type data member.

Parameters

value

Value to assign

Definition at line 297 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Parent_type, CDomain_parent_Base::m_set_State, and rapidjson::value.

SetParent_type() [2/2]

CDomain_parent_Base::TParent_type & CDomain_parent_Base::SetParent_type ( void  )

inline

Assign a value to Parent_type data member.

Returns

Reference to the data value.

Definition at line 304 of file Domain_parent_.hpp.

References CDomain_parent_Base::IsSetParent_type(), CDomain_parent_Base::m_Parent_type, CDomain_parent_Base::m_set_State, and CSerialObject::UnassignedByte().

SetParentid() [1/2]

void CDomain_parent_Base::SetParentid

(

CDomain_parent_Base::TParentid &

value

)

Assign a value to Parentid data member.

Parameters

value

Reference to value.

Definition at line 73 of file Domain_parent_.cpp.

References CDomain_parent_Base::m_Parentid, and rapidjson::value.

SetParentid() [2/2]

CDomain_parent_Base::TParentid & CDomain_parent_Base::SetParentid ( void  )

inline

Assign a value to Parentid data member.

Returns

Reference to the data value.

Definition at line 337 of file Domain_parent_.hpp.

References CDomain_parent_Base::m_Parentid, and CDomain_parent_Base::ResetParentid().

SetPending()

CCdd_Base::TPending & CCdd_Base::SetPending ( void  )

inline

Assign a value to Pending data member.

Returns

Reference to the data value.

Definition at line 1484 of file Cdd_.hpp.

References CCdd_Base::m_Pending, and CCdd_Base::m_set_State.

Referenced by AlignmentCollection::addPendingAlignment(), CCdCore::AddPendingSeqAlign(), CCdCore::Clear(), CCdCore::ErasePendingRow(), and GetPendingSeqId().

SetPosfreq() [1/2]

void CCdd_Base::SetPosfreq

(

CCdd_Base::TPosfreq &

value

)

Assign a value to Posfreq data member.

Parameters

value

Reference to value.

Definition at line 185 of file Cdd_.cpp.

References CCdd_Base::m_Posfreq, and rapidjson::value.

SetPosfreq() [2/2]

CCdd_Base::TPosfreq & CCdd_Base::SetPosfreq

(

void

)

Assign a value to Posfreq data member.

Returns

Reference to the data value.

Definition at line 190 of file Cdd_.cpp.

References CCdd_Base::m_Posfreq.

SetPreferred_nodes() [1/2]

void CCdd_pref_nodes_Base::SetPreferred_nodes

(

CCdd_pref_nodes_Base::TPreferred_nodes &

value

)

Assign a value to Preferred_nodes data member.

Parameters

value

Reference to value.

Definition at line 61 of file Cdd_pref_nodes_.cpp.

References CCdd_pref_nodes_Base::m_Preferred_nodes, and rapidjson::value.

SetPreferred_nodes() [2/2]

CCdd_pref_nodes_Base::TPreferred_nodes & CCdd_pref_nodes_Base::SetPreferred_nodes ( void  )

inline

Assign a value to Preferred_nodes data member.

Returns

Reference to the data value.

Definition at line 300 of file Cdd_pref_nodes_.hpp.

References CCdd_pref_nodes_Base::m_Preferred_nodes, and CCdd_pref_nodes_Base::ResetPreferred_nodes().

SetPresentInChildCD() [1/3]

void CNode_annotation_Base::SetPresentInChildCD ( const TPresentInChildCD &  value )

inline

Assign a value to PresentInChildCD data member.

Parameters

value

Value to assign

Definition at line 221 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_PresentInChildCD, CNode_annotation_Base::m_set_State, and rapidjson::value.

SetPresentInChildCD() [2/3]

void CNode_annotation_Base::SetPresentInChildCD ( CNode_annotation_Base::TPresentInChildCD &&  value )

inline

Definition at line 228 of file Node_annotation_.hpp.

References CNode_annotation_Base::m_PresentInChildCD, CNode_annotation_Base::m_set_State, and rapidjson::value.

SetPresentInChildCD() [3/3]

CNode_annotation_Base::TPresentInChildCD & CNode_annotation_Base::SetPresentInChildCD ( void  )

inline

Assign a value to PresentInChildCD data member.

Returns

Reference to the data value.

Definition at line 235 of file Node_annotation_.hpp.

References CNode_annotation_Base::IsSetPresentInChildCD(), CNode_annotation_Base::m_PresentInChildCD, CNode_annotation_Base::m_set_State, and CSerialObject::UnassignedString().

SetProfile_range() [1/2]

void CCdd_Base::SetProfile_range

(

CCdd_Base::TProfile_range &

value

)

Assign a value to Profile_range data member.

Parameters

value

Reference to value.

Definition at line 151 of file Cdd_.cpp.

References CCdd_Base::m_Profile_range, and rapidjson::value.

SetProfile_range() [2/2]

CCdd_Base::TProfile_range & CCdd_Base::SetProfile_range

(

void

)

Assign a value to Profile_range data member.

Returns

Reference to the data value.

Definition at line 156 of file Cdd_.cpp.

References CCdd_Base::m_Profile_range.

SetProject_id() [1/2]

void CCdd_Project_Base::SetProject_id ( CCdd_Project_Base::TProject_id  value )

inline

Assign a value to Project_id data member.

Parameters

value

Value to assign

Definition at line 770 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Project_id, CCdd_Project_Base::m_set_State, and rapidjson::value.

SetProject_id() [2/2]

CCdd_Project_Base::TProject_id & CCdd_Project_Base::SetProject_id ( void  )

inline

Assign a value to Project_id data member.

Returns

Reference to the data value.

Definition at line 777 of file Cdd_Project_.hpp.

References CCdd_Project_Base::IsSetProject_id(), CCdd_Project_Base::m_Project_id, CCdd_Project_Base::m_set_State, and CSerialObject::UnassignedByte().

SetRank() [1/3]

void CCdd_org_ref_Base::SetRank ( const TRank &  value )

inline

Assign a value to Rank data member.

Parameters

value

Value to assign

Definition at line 435 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Rank, CCdd_org_ref_Base::m_set_State, and rapidjson::value.

SetRank() [2/3]

void CCdd_org_ref_Base::SetRank ( CCdd_org_ref_Base::TRank &&  value )

inline

Definition at line 442 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Rank, CCdd_org_ref_Base::m_set_State, and rapidjson::value.

SetRank() [3/3]

CCdd_org_ref_Base::TRank & CCdd_org_ref_Base::SetRank ( void  )

inline

Assign a value to Rank data member.

Returns

Reference to the data value.

Definition at line 449 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::IsSetRank(), CCdd_org_ref_Base::m_Rank, CCdd_org_ref_Base::m_set_State, and CSerialObject::UnassignedString().

SetReadonly_status() [1/2]

void CCdd_descr_Base::SetReadonly_status ( CCdd_descr_Base::TReadonly_status  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 989 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Readonly_status, eDoNotResetVariant, CCdd_descr_Base::m_Readonly_status, CCdd_descr_Base::Select(), and rapidjson::value.

SetReadonly_status() [2/2]

CCdd_descr_Base::TReadonly_status & CCdd_descr_Base::SetReadonly_status ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 982 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Readonly_status, eDoNotResetVariant, CCdd_descr_Base::m_Readonly_status, and CCdd_descr_Base::Select().

SetRect() [1/2]

void CCdd_Viewer_Base::SetRect

(

CCdd_Viewer_Base::TRect &

value

)

Assign a value to Rect data member.

Parameters

value

Reference to value.

Definition at line 75 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::m_Rect, and rapidjson::value.

SetRect() [2/2]

CCdd_Viewer_Base::TRect & CCdd_Viewer_Base::SetRect

(

void

)

Assign a value to Rect data member.

Returns

Reference to the data value.

Definition at line 80 of file Cdd_Viewer_.cpp.

References CCdd_Viewer_Base::m_Rect.

SetReference() [1/8]

void CCdd_descr_Base::SetReference

(

CCdd_descr_Base::TReference &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 254 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Reference, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetReference() [2/8]

void CCdd_org_ref_Base::SetReference

(

CCdd_org_ref_Base::TReference &

value

)

Assign a value to Reference data member.

Parameters

value

Reference to value.

Definition at line 60 of file Cdd_org_ref_.cpp.

References CCdd_org_ref_Base::m_Reference, and rapidjson::value.

Referenced by CPriorityTaxNodes::TaxIdsToCddOrgRefSet().

SetReference() [3/8]

void CFeature_evidence_Base::SetReference

(

CFeature_evidence_Base::TReference &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 139 of file Feature_evidence_.cpp.

References CObject::AddReference(), CFeature_evidence_Base::e_Reference, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, CFeature_evidence_Base::ResetSelection(), and rapidjson::value.

SetReference() [4/8]

void CUpdate_comment_Base::SetReference

(

CUpdate_comment_Base::TReference &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 203 of file Update_comment_.cpp.

References CObject::AddReference(), CUpdate_comment_Base::e_Reference, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, CUpdate_comment_Base::ResetSelection(), and rapidjson::value.

SetReference() [5/8]

CCdd_descr_Base::TReference & CCdd_descr_Base::SetReference

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 248 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Reference, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

Referenced by CDDRefDialog::OnButton().

SetReference() [6/8]

CCdd_org_ref_Base::TReference & CCdd_org_ref_Base::SetReference ( void  )

inline

Assign a value to Reference data member.

Returns

Reference to the data value.

Definition at line 308 of file Cdd_org_ref_.hpp.

References CCdd_org_ref_Base::m_Reference, and CCdd_org_ref_Base::ResetReference().

SetReference() [7/8]

CFeature_evidence_Base::TReference & CFeature_evidence_Base::SetReference

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 133 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Reference, eDoNotResetVariant, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::Select().

SetReference() [8/8]

CUpdate_comment_Base::TReference & CUpdate_comment_Base::SetReference

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 197 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Reference, eDoNotResetVariant, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::Select().

SetReject_loc() [1/2]

void CUpdate_comment_Base::SetReject_loc

(

CUpdate_comment_Base::TReject_loc &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 181 of file Update_comment_.cpp.

References CObject::AddReference(), CUpdate_comment_Base::e_Reject_loc, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, CUpdate_comment_Base::ResetSelection(), and rapidjson::value.

SetReject_loc() [2/2]

CUpdate_comment_Base::TReject_loc & CUpdate_comment_Base::SetReject_loc

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 175 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Reject_loc, eDoNotResetVariant, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::Select().

SetRejects()

CCdd_Base::TRejects & CCdd_Base::SetRejects ( void  )

inline

Assign a value to Rejects data member.

Returns

Reference to the data value.

Definition at line 1509 of file Cdd_.hpp.

References CCdd_Base::m_Rejects, and CCdd_Base::m_set_State.

Referenced by ASNDataManager::AddReject().

SetRelease() [1/3]

void CGlobal_id_Base::SetRelease ( const TRelease &  value )

inline

Assign a value to Release data member.

Parameters

value

Value to assign

Definition at line 362 of file Global_id_.hpp.

References CGlobal_id_Base::m_Release, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetRelease() [2/3]

void CGlobal_id_Base::SetRelease ( CGlobal_id_Base::TRelease &&  value )

inline

Definition at line 369 of file Global_id_.hpp.

References CGlobal_id_Base::m_Release, CGlobal_id_Base::m_set_State, and rapidjson::value.

SetRelease() [3/3]

CGlobal_id_Base::TRelease & CGlobal_id_Base::SetRelease ( void  )

inline

Assign a value to Release data member.

Returns

Reference to the data value.

Definition at line 376 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetRelease(), CGlobal_id_Base::m_Release, CGlobal_id_Base::m_set_State, and CSerialObject::UnassignedString().

SetRepeats() [1/2]

void CCdd_descr_Base::SetRepeats

(

CCdd_descr_Base::TRepeats &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 370 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Repeats, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetRepeats() [2/2]

CCdd_descr_Base::TRepeats & CCdd_descr_Base::SetRepeats

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 364 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Repeats, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetReplaces() [1/2]

void CUpdate_comment_Base::SetReplaces

(

CUpdate_comment_Base::TReplaces &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 159 of file Update_comment_.cpp.

References CObject::AddReference(), CUpdate_comment_Base::e_Replaces, CUpdate_comment_Base::m_choice, CUpdate_comment_Base::m_object, CUpdate_comment_Base::ResetSelection(), and rapidjson::value.

SetReplaces() [2/2]

CUpdate_comment_Base::TReplaces & CUpdate_comment_Base::SetReplaces

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 153 of file Update_comment_.cpp.

References CUpdate_comment_Base::e_Replaces, eDoNotResetVariant, CUpdate_comment_Base::m_object, and CUpdate_comment_Base::Select().

SetRids()

CCdd_Project_Base::TRids & CCdd_Project_Base::SetRids ( void  )

inline

Assign a value to Rids data member.

Returns

Reference to the data value.

Definition at line 693 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Rids, and CCdd_Project_Base::m_set_State.

SetRoot() [1/2]

void CSequence_tree_Base::SetRoot

(

CSequence_tree_Base::TRoot &

value

)

Assign a value to Root data member.

Parameters

value

Reference to value.

Definition at line 81 of file Sequence_tree_.cpp.

References CSequence_tree_Base::m_Root, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAsnSeqTree(), and SeqTreeAsnizer::convertToSeqTree().

SetRoot() [2/2]

CSequence_tree_Base::TRoot & CSequence_tree_Base::SetRoot ( void  )

inline

Assign a value to Root data member.

Returns

Reference to the data value.

Definition at line 436 of file Sequence_tree_.hpp.

References CSequence_tree_Base::m_Root, and CSequence_tree_Base::ResetRoot().

SetRow_labels()

CMatrix_Base::TRow_labels & CMatrix_Base::SetRow_labels ( void  )

inline

Assign a value to Row_labels data member.

Returns

Reference to the data value.

Definition at line 423 of file Matrix_.hpp.

References CMatrix_Base::m_Row_labels, and CMatrix_Base::m_set_State.

SetRowId() [1/2]

void CSeqTree_node_Base::C_Children::C_Footprint::SetRowId ( TRowId  value )

inline

Assign a value to RowId data member.

Parameters

value

Value to assign

Definition at line 654 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State, and rapidjson::value.

SetRowId() [2/2]

CSeqTree_node_Base::C_Children::C_Footprint::TRowId & CSeqTree_node_Base::C_Children::C_Footprint::SetRowId ( void  )

inline

Assign a value to RowId data member.

Returns

Reference to the data value.

Definition at line 661 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::m_set_State, and CSerialObject::UnassignedByte().

SetScale_factor() [1/2]

void CMatrix_Base::SetScale_factor ( CMatrix_Base::TScale_factor  value )

inline

Assign a value to Scale_factor data member.

Parameters

value

Value to assign

Definition at line 458 of file Matrix_.hpp.

References CMatrix_Base::m_Scale_factor, CMatrix_Base::m_set_State, and rapidjson::value.

SetScale_factor() [2/2]

CMatrix_Base::TScale_factor & CMatrix_Base::SetScale_factor ( void  )

inline

Assign a value to Scale_factor data member.

Returns

Reference to the data value.

Definition at line 465 of file Matrix_.hpp.

References CMatrix_Base::IsSetScale_factor(), CMatrix_Base::m_Scale_factor, CMatrix_Base::m_set_State, and CSerialObject::UnassignedByte().

SetScore_Matrix() [1/2]

void CAlgorithm_type_Base::SetScore_Matrix ( CAlgorithm_type_Base::TScore_Matrix  value )

inline

Assign a value to Score_Matrix data member.

Parameters

value

Value to assign

Definition at line 696 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Score_Matrix, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetScore_Matrix() [2/2]

CAlgorithm_type_Base::TScore_Matrix & CAlgorithm_type_Base::SetScore_Matrix ( void  )

inline

Assign a value to Score_Matrix data member.

Returns

Reference to the data value.

Definition at line 703 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetScore_Matrix(), CAlgorithm_type_Base::m_Score_Matrix, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetScoremat() [1/2]

void CCdd_Base::SetScoremat

(

CCdd_Base::TScoremat &

value

)

Assign a value to Scoremat data member.

Parameters

value

Reference to value.

Definition at line 202 of file Cdd_.cpp.

References CCdd_Base::m_Scoremat, and rapidjson::value.

SetScoremat() [2/2]

CCdd_Base::TScoremat & CCdd_Base::SetScoremat

(

void

)

Assign a value to Scoremat data member.

Returns

Reference to the data value.

Definition at line 207 of file Cdd_.cpp.

References CCdd_Base::m_Scoremat.

SetScoreparams() [1/2]

void CCdd_Base::SetScoreparams

(

CCdd_Base::TScoreparams &

value

)

Assign a value to Scoreparams data member.

Parameters

value

Reference to value.

Definition at line 379 of file Cdd_.cpp.

References CCdd_Base::m_Scoreparams, and rapidjson::value.

SetScoreparams() [2/2]

CCdd_Base::TScoreparams & CCdd_Base::SetScoreparams

(

void

)

Assign a value to Scoreparams data member.

Returns

Reference to the data value.

Definition at line 384 of file Cdd_.cpp.

References CCdd_Base::m_Scoreparams.

SetScores() [1/2]

void CTriangle_Base::SetScores

(

CTriangle_Base::TScores &

value

)

Assign a value to Scores data member.

Parameters

value

Reference to value.

Definition at line 56 of file Triangle_.cpp.

References CTriangle_Base::m_Scores, and rapidjson::value.

SetScores() [2/2]

CTriangle_Base::TScores & CTriangle_Base::SetScores

(

void

)

Assign a value to Scores data member.

Returns

Reference to the data value.

Definition at line 61 of file Triangle_.cpp.

References CTriangle_Base::m_Scores.

SetScoring_Scheme() [1/2]

void CAlgorithm_type_Base::SetScoring_Scheme ( CAlgorithm_type_Base::TScoring_Scheme  value )

inline

Assign a value to Scoring_Scheme data member.

Parameters

value

Value to assign

Definition at line 602 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_Scoring_Scheme, CAlgorithm_type_Base::m_set_State, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetScoring_Scheme() [2/2]

CAlgorithm_type_Base::TScoring_Scheme & CAlgorithm_type_Base::SetScoring_Scheme ( void  )

inline

Assign a value to Scoring_Scheme data member.

Returns

Reference to the data value.

Definition at line 609 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetScoring_Scheme(), CAlgorithm_type_Base::m_Scoring_Scheme, CAlgorithm_type_Base::m_set_State, and CSerialObject::UnassignedByte().

SetScrapbook()

CCdd_descr_Base::TScrapbook & CCdd_descr_Base::SetScrapbook ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 917 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Scrapbook, eDoNotResetVariant, CCdd_descr_Base::m_Scrapbook, and CCdd_descr_Base::Select().

SetScripts()

CCdd_Project_Base::TScripts & CCdd_Project_Base::SetScripts ( void  )

inline

Assign a value to Scripts data member.

Returns

Reference to the data value.

Definition at line 647 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_Scripts, and CCdd_Project_Base::m_set_State.

SetSeqannot() [1/5]

void CDomain_parent_Base::SetSeqannot

(

CDomain_parent_Base::TSeqannot &

value

)

Assign a value to Seqannot data member.

Parameters

value

Reference to value.

Definition at line 83 of file Domain_parent_.cpp.

References CDomain_parent_Base::m_Seqannot, and rapidjson::value.

SetSeqannot() [2/5]

void CUpdate_align_Base::SetSeqannot

(

CUpdate_align_Base::TSeqannot &

value

)

Assign a value to Seqannot data member.

Parameters

value

Reference to value.

Definition at line 76 of file Update_align_.cpp.

References CUpdate_align_Base::m_Seqannot, and rapidjson::value.

Referenced by UpdateViewer::SaveAlignments().

SetSeqannot() [3/5]

CCdd_Base::TSeqannot & CCdd_Base::SetSeqannot ( void  )

inline

Assign a value to Seqannot data member.

Returns

Reference to the data value.

Definition at line 1228 of file Cdd_.hpp.

References CCdd_Base::m_Seqannot, and CCdd_Base::m_set_State.

Referenced by CCdCore::AddSeqAlign(), CCdCore::Clear(), ConsensusMaker::degapCdAlignment(), CCdCore::GetAlignment(), CCdCore::GetSeqAligns(), CCdFromFasta::ImportAlignmentData(), ConsensusMaker::remasterWithConsensus(), and SUApp::Run().

SetSeqannot() [4/5]

CDomain_parent_Base::TSeqannot & CDomain_parent_Base::SetSeqannot

(

void

)

Assign a value to Seqannot data member.

Returns

Reference to the data value.

Definition at line 88 of file Domain_parent_.cpp.

References CDomain_parent_Base::m_Seqannot.

SetSeqannot() [5/5]

CUpdate_align_Base::TSeqannot & CUpdate_align_Base::SetSeqannot

(

void

)

Assign a value to Seqannot data member.

Returns

Reference to the data value.

Definition at line 81 of file Update_align_.cpp.

References CUpdate_align_Base::m_Seqannot.

SetSeqfeat() [1/2]

void CFeature_evidence_Base::SetSeqfeat

(

CFeature_evidence_Base::TSeqfeat &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 183 of file Feature_evidence_.cpp.

References CObject::AddReference(), CFeature_evidence_Base::e_Seqfeat, CFeature_evidence_Base::m_choice, CFeature_evidence_Base::m_object, CFeature_evidence_Base::ResetSelection(), and rapidjson::value.

SetSeqfeat() [2/2]

CFeature_evidence_Base::TSeqfeat & CFeature_evidence_Base::SetSeqfeat

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 177 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::e_Seqfeat, eDoNotResetVariant, CFeature_evidence_Base::m_object, and CFeature_evidence_Base::Select().

SetSeqRange() [1/2]

void CSeqTree_node_Base::C_Children::C_Footprint::SetSeqRange

(

TSeqRange &

value

)

Assign a value to SeqRange data member.

Parameters

value

Reference to value.

Definition at line 61 of file SeqTree_node_.cpp.

References CSeq_interval_Base::Reset(), and rapidjson::value.

SetSeqRange() [2/2]

CSeqTree_node_Base::C_Children::C_Footprint::TSeqRange & CSeqTree_node_Base::C_Children::C_Footprint::SetSeqRange ( void  )

inline

Assign a value to SeqRange data member.

Returns

Reference to the data value.

Definition at line 617 of file SeqTree_node_.hpp.

SetSeqtree() [1/2]

void CCdd_Base::SetSeqtree

(

CCdd_Base::TSeqtree &

value

)

Assign a value to Seqtree data member.

Parameters

value

Reference to value.

Definition at line 396 of file Cdd_.cpp.

References CCdd_Base::m_Seqtree, and rapidjson::value.

Referenced by SeqTreeAPI::loadAndValidateExistingTree(), and SeqTreeAPI::loadExistingTree().

SetSeqtree() [2/2]

CCdd_Base::TSeqtree & CCdd_Base::SetSeqtree

(

void

)

Assign a value to Seqtree data member.

Returns

Reference to the data value.

Definition at line 401 of file Cdd_.cpp.

References CCdd_Base::m_Seqtree.

SetSequences() [1/2]

void CCdd_Base::SetSequences

(

CCdd_Base::TSequences &

value

)

Assign a value to Sequences data member.

Parameters

value

Reference to value.

Definition at line 134 of file Cdd_.cpp.

References CCdd_Base::m_Sequences, and rapidjson::value.

Referenced by AlignmentCollection::AddSequence(), CDRefresher::CDRefresher(), and CSeqAnnotFromFasta::MakeSeqAnnotFromFasta().

SetSequences() [2/2]

CCdd_Base::TSequences & CCdd_Base::SetSequences

(

void

)

Assign a value to Sequences data member.

Returns

Reference to the data value.

Definition at line 139 of file Cdd_.cpp.

References CCdd_Base::m_Sequences.

Referenced by CCdCore::AddSequence(), CCdCore::Clear(), CCdCore::EraseSequence(), CCdCore::GetBioseqForIndex(), and CCdFromFasta::ImportAlignmentData().

SetSiblings() [1/4]

void CCdd_Base::SetSiblings

(

CCdd_Base::TSiblings &

value

)

Assign a value to Siblings data member.

Parameters

value

Reference to value.

Definition at line 270 of file Cdd_.cpp.

References CCdd_Base::m_Siblings, and rapidjson::value.

SetSiblings() [2/4]

void CCdd_tree_Base::SetSiblings

(

CCdd_tree_Base::TSiblings &

value

)

Assign a value to Siblings data member.

Parameters

value

Reference to value.

Definition at line 129 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Siblings, and rapidjson::value.

SetSiblings() [3/4]

CCdd_Base::TSiblings & CCdd_Base::SetSiblings

(

void

)

Assign a value to Siblings data member.

Returns

Reference to the data value.

Definition at line 275 of file Cdd_.cpp.

References CCdd_Base::m_Siblings.

SetSiblings() [4/4]

CCdd_tree_Base::TSiblings & CCdd_tree_Base::SetSiblings

(

void

)

Assign a value to Siblings data member.

Returns

Reference to the data value.

Definition at line 134 of file Cdd_tree_.cpp.

References CCdd_tree_Base::m_Siblings.

SetSource() [1/2]

void CCdd_descr_Base::SetSource

(

const TSource &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 308 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Source, eDoNotResetVariant, CCdd_descr_Base::m_string, CCdd_descr_Base::Select(), and rapidjson::value.

SetSource() [2/2]

CCdd_descr_Base::TSource & CCdd_descr_Base::SetSource ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 864 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Source, eDoNotResetVariant, CCdd_descr_Base::m_string, and CCdd_descr_Base::Select().

SetSource_id() [1/2]

void CCdd_descr_Base::SetSource_id

(

CCdd_descr_Base::TSource_id &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 348 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Source_id, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetSource_id() [2/2]

CCdd_descr_Base::TSource_id & CCdd_descr_Base::SetSource_id

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 342 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Source_id, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetStatus() [1/2]

void CCdd_descr_Base::SetStatus ( CCdd_descr_Base::TStatus  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 891 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Status, eDoNotResetVariant, CCdd_descr_Base::m_Status, CCdd_descr_Base::Select(), and rapidjson::value.

SetStatus() [2/2]

CCdd_descr_Base::TStatus & CCdd_descr_Base::SetStatus ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 884 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Status, eDoNotResetVariant, CCdd_descr_Base::m_Status, and CCdd_descr_Base::Select().

SetStyle_dictionary() [1/2]

void CCdd_Base::SetStyle_dictionary

(

CCdd_Base::TStyle_dictionary &

value

)

Assign a value to Style_dictionary data member.

Parameters

value

Reference to value.

Definition at line 339 of file Cdd_.cpp.

References CCdd_Base::m_Style_dictionary, and rapidjson::value.

SetStyle_dictionary() [2/2]

CCdd_Base::TStyle_dictionary & CCdd_Base::SetStyle_dictionary

(

void

)

Assign a value to Style_dictionary data member.

Returns

Reference to the data value.

Definition at line 344 of file Cdd_.cpp.

References CCdd_Base::m_Style_dictionary.

SetSubelementid() [1/2]

void CCdd_book_ref_Base::SetSubelementid ( CCdd_book_ref_Base::TSubelementid  value )

inline

Assign a value to Subelementid data member.

Parameters

value

Value to assign

Definition at line 552 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State, CCdd_book_ref_Base::m_Subelementid, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetSubelementid() [2/2]

CCdd_book_ref_Base::TSubelementid & CCdd_book_ref_Base::SetSubelementid ( void  )

inline

Assign a value to Subelementid data member.

Returns

Reference to the data value.

Definition at line 559 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetSubelementid(), CCdd_book_ref_Base::m_set_State, CCdd_book_ref_Base::m_Subelementid, and CSerialObject::UnassignedByte().

SetTax_source() [1/2]

void CCdd_descr_Base::SetTax_source

(

CCdd_descr_Base::TTax_source &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 298 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Tax_source, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetTax_source() [2/2]

CCdd_descr_Base::TTax_source & CCdd_descr_Base::SetTax_source

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 292 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Tax_source, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetTextelement() [1/2]

void CCdd_book_ref_Base::SetTextelement ( CCdd_book_ref_Base::TTextelement  value )

inline

Assign a value to Textelement data member.

Parameters

value

Value to assign

Definition at line 458 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::m_set_State, CCdd_book_ref_Base::m_Textelement, and rapidjson::value.

Referenced by CDDBookRefDialog::OnClick().

SetTextelement() [2/2]

CCdd_book_ref_Base::TTextelement & CCdd_book_ref_Base::SetTextelement ( void  )

inline

Assign a value to Textelement data member.

Returns

Reference to the data value.

Definition at line 465 of file Cdd_book_ref_.hpp.

References CCdd_book_ref_Base::IsSetTextelement(), CCdd_book_ref_Base::m_set_State, CCdd_book_ref_Base::m_Textelement, and CSerialObject::UnassignedByte().

SetTitle() [1/2]

void CCdd_descr_Base::SetTitle

(

const TTitle &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 446 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Title, eDoNotResetVariant, CCdd_descr_Base::m_string, CCdd_descr_Base::Select(), and rapidjson::value.

SetTitle() [2/2]

CCdd_descr_Base::TTitle & CCdd_descr_Base::SetTitle ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 1021 of file Cdd_descr_.hpp.

References CCdd_descr_Base::e_Title, eDoNotResetVariant, CCdd_descr_Base::m_string, and CCdd_descr_Base::Select().

SetTop() [1/2]

void CCdd_Viewer_Rect_Base::SetTop ( CCdd_Viewer_Rect_Base::TTop  value )

inline

Assign a value to Top data member.

Parameters

value

Value to assign

Definition at line 310 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State, CCdd_Viewer_Rect_Base::m_Top, and rapidjson::value.

SetTop() [2/2]

CCdd_Viewer_Rect_Base::TTop & CCdd_Viewer_Rect_Base::SetTop ( void  )

inline

Assign a value to Top data member.

Returns

Reference to the data value.

Definition at line 317 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetTop(), CCdd_Viewer_Rect_Base::m_set_State, CCdd_Viewer_Rect_Base::m_Top, and CSerialObject::UnassignedByte().

SetTree_scope() [1/2]

void CAlgorithm_type_Base::SetTree_scope ( CAlgorithm_type_Base::TTree_scope  value )

inline

Assign a value to Tree_scope data member.

Parameters

value

Value to assign

Definition at line 978 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::m_set_State, CAlgorithm_type_Base::m_Tree_scope, and rapidjson::value.

Referenced by SeqTreeAsnizer::convertToAlgType().

SetTree_scope() [2/2]

CAlgorithm_type_Base::TTree_scope & CAlgorithm_type_Base::SetTree_scope ( void  )

inline

Assign a value to Tree_scope data member.

Returns

Reference to the data value.

Definition at line 985 of file Algorithm_type_.hpp.

References CAlgorithm_type_Base::IsSetTree_scope(), CAlgorithm_type_Base::m_set_State, CAlgorithm_type_Base::m_Tree_scope, and CSerialObject::UnassignedByte().

SetTrunc_master() [1/2]

void CCdd_Base::SetTrunc_master

(

CCdd_Base::TTrunc_master &

value

)

Assign a value to Trunc_master data member.

Parameters

value

Reference to value.

Definition at line 168 of file Cdd_.cpp.

References CCdd_Base::m_Trunc_master, and rapidjson::value.

SetTrunc_master() [2/2]

CCdd_Base::TTrunc_master & CCdd_Base::SetTrunc_master

(

void

)

Assign a value to Trunc_master data member.

Returns

Reference to the data value.

Definition at line 173 of file Cdd_.cpp.

References CCdd_Base::m_Trunc_master.

SetType() [1/6]

void CAlign_annot_Base::SetType ( CAlign_annot_Base::TType  value )

inline

Assign a value to Type data member.

Parameters

value

Value to assign

Definition at line 547 of file Align_annot_.hpp.

References CAlign_annot_Base::m_set_State, CAlign_annot_Base::m_Type, and rapidjson::value.

Referenced by CDDAnnotateDialog::EditAnnotation().

SetType() [2/6]

void CCdd_Script_Base::SetType ( CCdd_Script_Base::TType  value )

inline

Assign a value to Type data member.

Parameters

value

Value to assign

Definition at line 280 of file Cdd_Script_.hpp.

References CCdd_Script_Base::m_set_State, CCdd_Script_Base::m_Type, and rapidjson::value.

SetType() [3/6]

void CUpdate_align_Base::SetType ( CUpdate_align_Base::TType  value )

inline

Assign a value to Type data member.

Parameters

value

Value to assign

Definition at line 327 of file Update_align_.hpp.

References CUpdate_align_Base::m_set_State, CUpdate_align_Base::m_Type, and rapidjson::value.

Referenced by UpdateViewer::SaveAlignments().

SetType() [4/6]

CAlign_annot_Base::TType & CAlign_annot_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 554 of file Align_annot_.hpp.

References CAlign_annot_Base::IsSetType(), CAlign_annot_Base::m_set_State, CAlign_annot_Base::m_Type, and CSerialObject::UnassignedByte().

SetType() [5/6]

CCdd_Script_Base::TType & CCdd_Script_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 287 of file Cdd_Script_.hpp.

References CCdd_Script_Base::IsSetType(), CCdd_Script_Base::m_set_State, CCdd_Script_Base::m_Type, and CSerialObject::UnassignedByte().

SetType() [6/6]

CUpdate_align_Base::TType & CUpdate_align_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 334 of file Update_align_.hpp.

References CUpdate_align_Base::IsSetType(), CUpdate_align_Base::m_set_State, CUpdate_align_Base::m_Type, and CSerialObject::UnassignedByte().

SetUid() [1/2]

void CCdd_id_Base::SetUid ( CCdd_id_Base::TUid  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 280 of file Cdd_id_.hpp.

References CCdd_id_Base::e_Uid, eDoNotResetVariant, CCdd_id_Base::m_Uid, CCdd_id_Base::Select(), and rapidjson::value.

SetUid() [2/2]

CCdd_id_Base::TUid & CCdd_id_Base::SetUid ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 273 of file Cdd_id_.hpp.

References CCdd_id_Base::e_Uid, eDoNotResetVariant, CCdd_id_Base::m_Uid, and CCdd_id_Base::Select().

SetUpdate_date() [1/4]

void CCdd_descr_Base::SetUpdate_date

(

CCdd_descr_Base::TUpdate_date &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 326 of file Cdd_descr_.cpp.

References CObject::AddReference(), CCdd_descr_Base::e_Update_date, CCdd_descr_Base::m_choice, CCdd_descr_Base::m_object, CCdd_descr_Base::ResetSelection(), and rapidjson::value.

SetUpdate_date() [2/4]

void CCdd_Project_Base::SetUpdate_date

(

CCdd_Project_Base::TUpdate_date &

value

)

Assign a value to Update_date data member.

Parameters

value

Reference to value.

Definition at line 130 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Update_date, and rapidjson::value.

SetUpdate_date() [3/4]

CCdd_descr_Base::TUpdate_date & CCdd_descr_Base::SetUpdate_date

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 320 of file Cdd_descr_.cpp.

References CCdd_descr_Base::e_Update_date, eDoNotResetVariant, CCdd_descr_Base::m_object, and CCdd_descr_Base::Select().

SetUpdate_date() [4/4]

CCdd_Project_Base::TUpdate_date & CCdd_Project_Base::SetUpdate_date

(

void

)

Assign a value to Update_date data member.

Returns

Reference to the data value.

Definition at line 135 of file Cdd_Project_.cpp.

References CCdd_Project_Base::m_Update_date.

SetUser_annotations() [1/2]

void CCdd_Base::SetUser_annotations

(

CCdd_Base::TUser_annotations &

value

)

Assign a value to User_annotations data member.

Parameters

value

Reference to value.

Definition at line 356 of file Cdd_.cpp.

References CCdd_Base::m_User_annotations, and rapidjson::value.

SetUser_annotations() [2/2]

CCdd_Base::TUser_annotations & CCdd_Base::SetUser_annotations

(

void

)

Assign a value to User_annotations data member.

Returns

Reference to the data value.

Definition at line 361 of file Cdd_.cpp.

References CCdd_Base::m_User_annotations.

SetVersion() [1/2]

void CGlobal_id_Base::SetVersion ( CGlobal_id_Base::TVersion  value )

inline

Assign a value to Version data member.

Parameters

value

Value to assign

Definition at line 416 of file Global_id_.hpp.

References CGlobal_id_Base::m_set_State, CGlobal_id_Base::m_Version, and rapidjson::value.

SetVersion() [2/2]

CGlobal_id_Base::TVersion & CGlobal_id_Base::SetVersion ( void  )

inline

Assign a value to Version data member.

Returns

Reference to the data value.

Definition at line 423 of file Global_id_.hpp.

References CGlobal_id_Base::IsSetVersion(), CGlobal_id_Base::m_set_State, CGlobal_id_Base::m_Version, and CSerialObject::UnassignedByte().

SetViewers()

CCdd_Project_Base::TViewers & CCdd_Project_Base::SetViewers ( void  )

inline

Assign a value to Viewers data member.

Returns

Reference to the data value.

Definition at line 575 of file Cdd_Project_.hpp.

References CCdd_Project_Base::m_set_State, and CCdd_Project_Base::m_Viewers.

SetWidth() [1/2]

void CCdd_Viewer_Rect_Base::SetWidth ( CCdd_Viewer_Rect_Base::TWidth  value )

inline

Assign a value to Width data member.

Parameters

value

Value to assign

Definition at line 404 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::m_set_State, CCdd_Viewer_Rect_Base::m_Width, and rapidjson::value.

SetWidth() [2/2]

CCdd_Viewer_Rect_Base::TWidth & CCdd_Viewer_Rect_Base::SetWidth ( void  )

inline

Assign a value to Width data member.

Returns

Reference to the data value.

Definition at line 411 of file Cdd_Viewer_Rect_.hpp.

References CCdd_Viewer_Rect_Base::IsSetWidth(), CCdd_Viewer_Rect_Base::m_set_State, CCdd_Viewer_Rect_Base::m_Width, and CSerialObject::UnassignedByte().

ThrowInvalidSelection() [1/6]

void CCdd_descr_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 219 of file Cdd_descr_.cpp.

References DIAG_COMPILE_INFO, CCdd_descr_Base::m_choice, and CCdd_descr_Base::sm_SelectionNames.

Referenced by CCdd_descr_Base::CheckSelected().

ThrowInvalidSelection() [2/6]

void CCdd_id_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 95 of file Cdd_id_.cpp.

References DIAG_COMPILE_INFO, CCdd_id_Base::m_choice, and CCdd_id_Base::sm_SelectionNames.

Referenced by CCdd_id_Base::CheckSelected().

ThrowInvalidSelection() [3/6]

void CCdd_pref_node_descr_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 98 of file Cdd_pref_node_descr_.cpp.

References DIAG_COMPILE_INFO, CCdd_pref_node_descr_Base::m_choice, and CCdd_pref_node_descr_Base::sm_SelectionNames.

Referenced by CCdd_pref_node_descr_Base::CheckSelected().

ThrowInvalidSelection() [4/6]

void CFeature_evidence_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 116 of file Feature_evidence_.cpp.

References DIAG_COMPILE_INFO, CFeature_evidence_Base::m_choice, and CFeature_evidence_Base::sm_SelectionNames.

Referenced by CFeature_evidence_Base::CheckSelected().

ThrowInvalidSelection() [5/6]

void CSeqTree_node_Base::C_Children::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 147 of file SeqTree_node_.cpp.

References DIAG_COMPILE_INFO, CSeqTree_node_Base::C_Children::m_choice, and CSeqTree_node_Base::C_Children::sm_SelectionNames.

Referenced by CSeqTree_node_Base::C_Children::CheckSelected().

ThrowInvalidSelection() [6/6]

void CUpdate_comment_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 114 of file Update_comment_.cpp.

References DIAG_COMPILE_INFO, CUpdate_comment_Base::m_choice, and CUpdate_comment_Base::sm_SelectionNames.

Referenced by CUpdate_comment_Base::CheckSelected().

Which() [1/6]

CCdd_descr_Base::E_Choice CCdd_descr_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 744 of file Cdd_descr_.hpp.

References CCdd_descr_Base::m_choice.

Which() [2/6]

CCdd_id_Base::E_Choice CCdd_id_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 231 of file Cdd_id_.hpp.

References CCdd_id_Base::m_choice.

Referenced by SameCDAccession().

Which() [3/6]

CCdd_pref_node_descr_Base::E_Choice CCdd_pref_node_descr_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 235 of file Cdd_pref_node_descr_.hpp.

References CCdd_pref_node_descr_Base::m_choice.

Which() [4/6]

CFeature_evidence_Base::E_Choice CFeature_evidence_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 322 of file Feature_evidence_.hpp.

References CFeature_evidence_Base::m_choice.

Which() [5/6]

CSeqTree_node_Base::C_Children::E_Choice CSeqTree_node_Base::C_Children::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 673 of file SeqTree_node_.hpp.

References CSeqTree_node_Base::C_Children::m_choice.

Which() [6/6]

CUpdate_comment_Base::E_Choice CUpdate_comment_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 324 of file Update_comment_.hpp.

References CUpdate_comment_Base::m_choice.

~C_Children()

CSeqTree_node_Base::C_Children::~C_Children

(

void

)

Definition at line 195 of file SeqTree_node_.cpp.

References CSeqTree_node_Base::Reset().

~C_Footprint()

CSeqTree_node_Base::C_Children::C_Footprint::~C_Footprint

(

void

)

Definition at line 95 of file SeqTree_node_.cpp.

~CAlgorithm_type()

CAlgorithm_type::~CAlgorithm_type

(

void

)

Definition at line 50 of file Algorithm_type.cpp.

~CAlgorithm_type_Base()

CAlgorithm_type_Base::~CAlgorithm_type_Base ( void  )

virtual

Definition at line 156 of file Algorithm_type_.cpp.

~CAlign_annot()

CAlign_annot::~CAlign_annot

(

void

)

Definition at line 50 of file Align_annot.cpp.

~CAlign_annot_Base()

CAlign_annot_Base::~CAlign_annot_Base ( void  )

virtual

Definition at line 128 of file Align_annot_.cpp.

~CAlign_annot_set()

CAlign_annot_set::~CAlign_annot_set

(

void

)

Definition at line 50 of file Align_annot_set.cpp.

~CAlign_annot_set_Base()

CAlign_annot_set_Base::~CAlign_annot_set_Base ( void  )

virtual

Definition at line 74 of file Align_annot_set_.cpp.

~CCdd_Base()

CCdd_Base::~CCdd_Base ( void  )

virtual

Definition at line 479 of file Cdd_.cpp.

~CCdd_book_ref()

CCdd_book_ref::~CCdd_book_ref

(

void

)

Definition at line 50 of file Cdd_book_ref.cpp.

~CCdd_book_ref_Base()

CCdd_book_ref_Base::~CCdd_book_ref_Base ( void  )

virtual

Definition at line 118 of file Cdd_book_ref_.cpp.

~CCdd_descr()

CCdd_descr::~CCdd_descr

(

void

)

Definition at line 50 of file Cdd_descr.cpp.

~CCdd_descr_Base()

CCdd_descr_Base::~CCdd_descr_Base ( void  )

virtual

Definition at line 488 of file Cdd_descr_.cpp.

References CCdd_descr_Base::Reset().

~CCdd_descr_set()

CCdd_descr_set::~CCdd_descr_set

(

void

)

Definition at line 50 of file Cdd_descr_set.cpp.

~CCdd_descr_set_Base()

CCdd_descr_set_Base::~CCdd_descr_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_descr_set_.cpp.

~CCdd_id()

CCdd_id::~CCdd_id

(

void

)

Definition at line 50 of file Cdd_id.cpp.

~CCdd_id_Base()

CCdd_id_Base::~CCdd_id_Base ( void  )

virtual

Definition at line 142 of file Cdd_id_.cpp.

References CCdd_id_Base::Reset().

~CCdd_id_set()

CCdd_id_set::~CCdd_id_set

(

void

)

Definition at line 50 of file Cdd_id_set.cpp.

~CCdd_id_set_Base()

CCdd_id_set_Base::~CCdd_id_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_id_set_.cpp.

~CCdd_org_ref()

CCdd_org_ref::~CCdd_org_ref

(

void

)

Definition at line 50 of file Cdd_org_ref.cpp.

~CCdd_org_ref_Base()

CCdd_org_ref_Base::~CCdd_org_ref_Base ( void  )

virtual

Definition at line 103 of file Cdd_org_ref_.cpp.

~CCdd_org_ref_set()

CCdd_org_ref_set::~CCdd_org_ref_set

(

void

)

Definition at line 50 of file Cdd_org_ref_set.cpp.

~CCdd_org_ref_set_Base()

CCdd_org_ref_set_Base::~CCdd_org_ref_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_org_ref_set_.cpp.

~CCdd_pref_node_descr()

CCdd_pref_node_descr::~CCdd_pref_node_descr

(

void

)

Definition at line 50 of file Cdd_pref_node_descr.cpp.

~CCdd_pref_node_descr_Base()

CCdd_pref_node_descr_Base::~CCdd_pref_node_descr_Base ( void  )

virtual

Definition at line 151 of file Cdd_pref_node_descr_.cpp.

References CCdd_pref_node_descr_Base::Reset().

~CCdd_pref_node_descr_set()

CCdd_pref_node_descr_set::~CCdd_pref_node_descr_set

(

void

)

Definition at line 50 of file Cdd_pref_node_descr_set.cpp.

~CCdd_pref_node_descr_set_Base()

CCdd_pref_node_descr_set_Base::~CCdd_pref_node_descr_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_pref_node_descr_set_.cpp.

~CCdd_pref_nodes()

CCdd_pref_nodes::~CCdd_pref_nodes

(

void

)

Definition at line 50 of file Cdd_pref_nodes.cpp.

~CCdd_pref_nodes_Base()

CCdd_pref_nodes_Base::~CCdd_pref_nodes_Base ( void  )

virtual

Definition at line 148 of file Cdd_pref_nodes_.cpp.

~CCdd_Project()

CCdd_Project::~CCdd_Project

(

void

)

Definition at line 50 of file Cdd_Project.cpp.

~CCdd_Project_Base()

CCdd_Project_Base::~CCdd_Project_Base ( void  )

virtual

Definition at line 183 of file Cdd_Project_.cpp.

~CCdd_repeat()

CCdd_repeat::~CCdd_repeat

(

void

)

Definition at line 50 of file Cdd_repeat.cpp.

~CCdd_repeat_Base()

CCdd_repeat_Base::~CCdd_repeat_Base ( void  )

virtual

Definition at line 95 of file Cdd_repeat_.cpp.

~CCdd_Script()

CCdd_Script::~CCdd_Script

(

void

)

Definition at line 50 of file Cdd_Script.cpp.

~CCdd_Script_Base()

CCdd_Script_Base::~CCdd_Script_Base ( void  )

virtual

Definition at line 100 of file Cdd_Script_.cpp.

~CCdd_set()

CCdd_set::~CCdd_set

(

void

)

Definition at line 50 of file Cdd_set.cpp.

~CCdd_set_Base()

CCdd_set_Base::~CCdd_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_set_.cpp.

~CCdd_tree()

CCdd_tree::~CCdd_tree

(

void

)

Definition at line 50 of file Cdd_tree.cpp.

~CCdd_tree_Base()

CCdd_tree_Base::~CCdd_tree_Base ( void  )

virtual

Definition at line 195 of file Cdd_tree_.cpp.

~CCdd_tree_set()

CCdd_tree_set::~CCdd_tree_set

(

void

)

Definition at line 50 of file Cdd_tree_set.cpp.

~CCdd_tree_set_Base()

CCdd_tree_set_Base::~CCdd_tree_set_Base ( void  )

virtual

Definition at line 74 of file Cdd_tree_set_.cpp.

~CCdd_Viewer()

CCdd_Viewer::~CCdd_Viewer

(

void

)

Definition at line 50 of file Cdd_Viewer.cpp.

~CCdd_Viewer_Base()

CCdd_Viewer_Base::~CCdd_Viewer_Base ( void  )

virtual

Definition at line 120 of file Cdd_Viewer_.cpp.

~CCdd_Viewer_Rect()

CCdd_Viewer_Rect::~CCdd_Viewer_Rect

(

void

)

Definition at line 50 of file Cdd_Viewer_Rect.cpp.

~CCdd_Viewer_Rect_Base()

CCdd_Viewer_Rect_Base::~CCdd_Viewer_Rect_Base ( void  )

virtual

Definition at line 79 of file Cdd_Viewer_Rect_.cpp.

~CDomain_parent()

CDomain_parent::~CDomain_parent

(

void

)

Definition at line 50 of file Domain_parent.cpp.

~CDomain_parent_Base()

CDomain_parent_Base::~CDomain_parent_Base ( void  )

virtual

Definition at line 125 of file Domain_parent_.cpp.

~CFeature_evidence()

CFeature_evidence::~CFeature_evidence

(

void

)

Definition at line 50 of file Feature_evidence.cpp.

~CFeature_evidence_Base()

CFeature_evidence_Base::~CFeature_evidence_Base ( void  )

virtual

Definition at line 238 of file Feature_evidence_.cpp.

References CFeature_evidence_Base::Reset().

~CGlobal_id()

CGlobal_id::~CGlobal_id

(

void

)

Definition at line 50 of file Global_id.cpp.

~CGlobal_id_Base()

CGlobal_id_Base::~CGlobal_id_Base ( void  )

virtual

Definition at line 97 of file Global_id_.cpp.

~CMatrix()

CMatrix::~CMatrix

(

void

)

Definition at line 50 of file Matrix.cpp.

~CMatrix_Base()

CMatrix_Base::~CMatrix_Base ( void  )

virtual

Definition at line 93 of file Matrix_.cpp.

~CNode_annotation()

CNode_annotation::~CNode_annotation

(

void

)

Definition at line 50 of file Node_annotation.cpp.

~CNode_annotation_Base()

CNode_annotation_Base::~CNode_annotation_Base ( void  )

virtual

Definition at line 86 of file Node_annotation_.cpp.

~CReject_id()

CReject_id::~CReject_id

(

void

)

Definition at line 50 of file Reject_id.cpp.

~CReject_id_Base()

CReject_id_Base::~CReject_id_Base ( void  )

virtual

Definition at line 88 of file Reject_id_.cpp.

~CSeqTree_node()

CSeqTree_node::~CSeqTree_node

(

void

)

Definition at line 50 of file SeqTree_node.cpp.

~CSeqTree_node_Base()

CSeqTree_node_Base::~CSeqTree_node_Base ( void  )

virtual

Definition at line 272 of file SeqTree_node_.cpp.

~CSequence_tree()

CSequence_tree::~CSequence_tree

(

void

)

Definition at line 50 of file Sequence_tree.cpp.

~CSequence_tree_Base()

CSequence_tree_Base::~CSequence_tree_Base ( void  )

virtual

Definition at line 119 of file Sequence_tree_.cpp.

~CTriangle()

CTriangle::~CTriangle

(

void

)

Definition at line 50 of file Triangle.cpp.

~CTriangle_Base()

CTriangle_Base::~CTriangle_Base ( void  )

virtual

Definition at line 101 of file Triangle_.cpp.

~CUpdate_align()

CUpdate_align::~CUpdate_align

(

void

)

Definition at line 50 of file Update_align.cpp.

~CUpdate_align_Base()

CUpdate_align_Base::~CUpdate_align_Base ( void  )

virtual

Definition at line 115 of file Update_align_.cpp.

~CUpdate_comment()

CUpdate_comment::~CUpdate_comment

(

void

)

Definition at line 50 of file Update_comment.cpp.

~CUpdate_comment_Base()

CUpdate_comment_Base::~CUpdate_comment_Base ( void  )

virtual

Definition at line 236 of file Update_comment_.cpp.

References CUpdate_comment_Base::Reset().

Variable Documentation

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

m_Accession

string CGlobal_id_Base::m_Accession

private

Definition at line 278 of file Global_id_.hpp.

Referenced by CGlobal_id_Base::GetAccession(), CGlobal_id_Base::ResetAccession(), and CGlobal_id_Base::SetAccession().

m_Accessions

list< string > CCdd_Viewer_Base::m_Accessions

private

Definition at line 245 of file Cdd_Viewer_.hpp.

Referenced by CCdd_Viewer_Base::GetAccessions(), CCdd_Viewer_Base::ResetAccessions(), and CCdd_Viewer_Base::SetAccessions().

m_Active

bool CCdd_org_ref_Base::m_Active

private

Definition at line 272 of file Cdd_org_ref_.hpp.

Referenced by CCdd_org_ref_Base::GetActive(), CCdd_org_ref_Base::ResetActive(), and CCdd_org_ref_Base::SetActive().

m_Algorithm

CRef< TAlgorithm > CSequence_tree_Base::m_Algorithm

private

Definition at line 273 of file Sequence_tree_.hpp.

Referenced by CSequence_tree_Base::GetAlgorithm(), CSequence_tree_Base::IsSetAlgorithm(), CSequence_tree_Base::ResetAlgorithm(), and CSequence_tree_Base::SetAlgorithm().

m_Aliases

list< string > CAlign_annot_Base::m_Aliases

private

Definition at line 402 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetAliases(), CAlign_annot_Base::ResetAliases(), and CAlign_annot_Base::SetAliases().

m_Alignannot

CRef< TAlignannot > CCdd_Base::m_Alignannot

private

Definition at line 1094 of file Cdd_.hpp.

Referenced by CCdd_Base::GetAlignannot(), CCdd_Base::IsSetAlignannot(), CCdd_Base::ResetAlignannot(), and CCdd_Base::SetAlignannot().

m_Ancestors

list< CRef< CDomain_parent > > CCdd_Base::m_Ancestors

private

Definition at line 1097 of file Cdd_.hpp.

Referenced by CCdd_Base::GetAncestors(), CCdd_Base::ResetAncestors(), and CCdd_Base::SetAncestors().

m_Annotation

CRef< TAnnotation > CSeqTree_node_Base::m_Annotation

private

Definition at line 583 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeqTree_node_Base::GetAnnotation(), CSeqTree_node_Base::IsSetAnnotation(), CSeqTree_node_Base::ResetAnnotation(), and CSeqTree_node_Base::SetAnnotation().

m_Avglen

int CCdd_repeat_Base::m_Avglen

private

Definition at line 230 of file Cdd_repeat_.hpp.

Referenced by CCdd_repeat_Base::GetAvglen(), CCdd_repeat_Base::ResetAvglen(), and CCdd_repeat_Base::SetAvglen().

m_Bookname

string CCdd_book_ref_Base::m_Bookname

private

Definition at line 365 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetBookname(), CCdd_book_ref_Base::ResetBookname(), and CCdd_book_ref_Base::SetBookname().

m_CdAccession

string CSequence_tree_Base::m_CdAccession

private

Definition at line 272 of file Sequence_tree_.hpp.

Referenced by CSequence_tree_Base::GetCdAccession(), CSequence_tree_Base::ResetCdAccession(), and CSequence_tree_Base::SetCdAccession().

m_Cdcolor

list< int > CCdd_Project_Base::m_Cdcolor

private

Definition at line 486 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetCdcolor(), CCdd_Project_Base::ResetCdcolor(), and CCdd_Project_Base::SetCdcolor().

m_Cds

list< CRef< CCdd > > CCdd_Project_Base::m_Cds

private

Definition at line 485 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetCds(), CCdd_Project_Base::ResetCds(), and CCdd_Project_Base::SetCds().

m_Celementid

string CCdd_book_ref_Base::m_Celementid

private

Definition at line 369 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetCelementid(), CCdd_book_ref_Base::ResetCelementid(), and CCdd_book_ref_Base::SetCelementid().

m_Children [1/5]

CRef< TChildren > CCdd_Base::m_Children

private

Definition at line 1088 of file Cdd_.hpp.

Referenced by CCdd_Base::GetChildren(), CCdd_Base::IsSetChildren(), CCdd_Base::ResetChildren(), and CCdd_Base::SetChildren().

m_Children [2/5]

CRef< TChildren > CCdd_tree_Base::m_Children

private

Definition at line 402 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetChildren(), CCdd_tree_Base::IsSetChildren(), CCdd_tree_Base::ResetChildren(), and CCdd_tree_Base::SetChildren().

m_Children [3/5]

NCBI_NS_NCBI::CUnionBuffer<TChildren> CSeqTree_node_Base::C_Children::m_Children

Definition at line 354 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_CHOICE_INFO(), CSeqTree_node_Base::C_Children::DoSelect(), CSeqTree_node_Base::C_Children::GetChildren(), CSeqTree_node_Base::GetChildren(), CSeqTree_node_Base::IsSetChildren(), CSeqTree_node_Base::C_Children::ResetSelection(), CSeqTree_node_Base::C_Children::SetChildren(), and CSeqTree_node_Base::SetChildren().

[4/5]

NCBI_NS_NCBI::CUnionBuffer<TChildren> { ... } ::m_Children

Definition at line 354 of file SeqTree_node_.hpp.

m_Children [5/5]

CRef< TChildren > CSeqTree_node_Base::m_Children

private

Definition at line 582 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeqTree_node_Base::ResetChildren(), and CSeqTree_node_Base::SetChildren().

m_choice [1/6]

E_Choice CCdd_descr_Base::m_choice

private

Definition at line 718 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::CheckSelected(), CCdd_descr_Base::DoSelect(), CCdd_descr_Base::IsAttribution(), CCdd_descr_Base::IsBook_ref(), CCdd_descr_Base::IsCategory(), CCdd_descr_Base::IsComment(), CCdd_descr_Base::IsCreate_date(), CCdd_descr_Base::IsCuration_status(), CCdd_descr_Base::IsOld_root(), CCdd_descr_Base::IsOthername(), CCdd_descr_Base::IsReadonly_status(), CCdd_descr_Base::IsReference(), CCdd_descr_Base::IsRepeats(), CCdd_descr_Base::IsScrapbook(), CCdd_descr_Base::IsSource(), CCdd_descr_Base::IsSource_id(), CCdd_descr_Base::IsStatus(), CCdd_descr_Base::IsTax_source(), CCdd_descr_Base::IsTitle(), CCdd_descr_Base::IsUpdate_date(), CCdd_descr_Base::Reset(), CCdd_descr_Base::ResetSelection(), CCdd_descr_Base::SetAttribution(), CCdd_descr_Base::SetBook_ref(), CCdd_descr_Base::SetCreate_date(), CCdd_descr_Base::SetOld_root(), CCdd_descr_Base::SetReference(), CCdd_descr_Base::SetRepeats(), CCdd_descr_Base::SetSource_id(), CCdd_descr_Base::SetTax_source(), CCdd_descr_Base::SetUpdate_date(), CCdd_descr_Base::ThrowInvalidSelection(), and CCdd_descr_Base::Which().

m_choice [2/6]

E_Choice CCdd_id_Base::m_choice

private

Definition at line 209 of file Cdd_id_.hpp.

Referenced by CCdd_id_Base::CheckSelected(), CCdd_id_Base::DoSelect(), CCdd_id_Base::IsGid(), CCdd_id_Base::IsUid(), CCdd_id_Base::Reset(), CCdd_id_Base::ResetSelection(), CCdd_id_Base::SetGid(), CCdd_id_Base::ThrowInvalidSelection(), and CCdd_id_Base::Which().

m_choice [3/6]

E_Choice CCdd_pref_node_descr_Base::m_choice

private

Definition at line 213 of file Cdd_pref_node_descr_.hpp.

Referenced by CCdd_pref_node_descr_Base::CheckSelected(), CCdd_pref_node_descr_Base::DoSelect(), CCdd_pref_node_descr_Base::IsCreate_date(), CCdd_pref_node_descr_Base::IsDescription(), CCdd_pref_node_descr_Base::Reset(), CCdd_pref_node_descr_Base::ResetSelection(), CCdd_pref_node_descr_Base::SetCreate_date(), CCdd_pref_node_descr_Base::ThrowInvalidSelection(), and CCdd_pref_node_descr_Base::Which().

m_choice [4/6]

E_Choice CFeature_evidence_Base::m_choice

private

Definition at line 300 of file Feature_evidence_.hpp.

Referenced by CFeature_evidence_Base::CheckSelected(), CFeature_evidence_Base::DoSelect(), CFeature_evidence_Base::IsBook_ref(), CFeature_evidence_Base::IsBsannot(), CFeature_evidence_Base::IsComment(), CFeature_evidence_Base::IsReference(), CFeature_evidence_Base::IsSeqfeat(), CFeature_evidence_Base::Reset(), CFeature_evidence_Base::ResetSelection(), CFeature_evidence_Base::SetBook_ref(), CFeature_evidence_Base::SetBsannot(), CFeature_evidence_Base::SetReference(), CFeature_evidence_Base::SetSeqfeat(), CFeature_evidence_Base::ThrowInvalidSelection(), and CFeature_evidence_Base::Which().

m_choice [5/6]

E_Choice CSeqTree_node_Base::C_Children::m_choice

private

Definition at line 347 of file SeqTree_node_.hpp.

Referenced by CSeqTree_node_Base::C_Children::CheckSelected(), CSeqTree_node_Base::C_Children::DoSelect(), CSeqTree_node_Base::C_Children::IsChildren(), CSeqTree_node_Base::C_Children::IsFootprint(), CSeqTree_node_Base::C_Children::Reset(), CSeqTree_node_Base::C_Children::ResetSelection(), CSeqTree_node_Base::C_Children::SetFootprint(), CSeqTree_node_Base::C_Children::ThrowInvalidSelection(), and CSeqTree_node_Base::C_Children::Which().

m_choice [6/6]

E_Choice CUpdate_comment_Base::m_choice

private

Definition at line 302 of file Update_comment_.hpp.

Referenced by CUpdate_comment_Base::CheckSelected(), CUpdate_comment_Base::DoSelect(), CUpdate_comment_Base::IsAddthis(), CUpdate_comment_Base::IsComment(), CUpdate_comment_Base::IsReference(), CUpdate_comment_Base::IsReject_loc(), CUpdate_comment_Base::IsReplaces(), CUpdate_comment_Base::Reset(), CUpdate_comment_Base::ResetSelection(), CUpdate_comment_Base::SetAddthis(), CUpdate_comment_Base::SetReference(), CUpdate_comment_Base::SetReject_loc(), CUpdate_comment_Base::SetReplaces(), CUpdate_comment_Base::ThrowInvalidSelection(), and CUpdate_comment_Base::Which().

m_Clustering_Method

int CAlgorithm_type_Base::m_Clustering_Method

private

Definition at line 553 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetClustering_Method(), CAlgorithm_type_Base::ResetClustering_Method(), and CAlgorithm_type_Base::SetClustering_Method().

m_Coloring_scope

int CAlgorithm_type_Base::m_Coloring_scope

private

Definition at line 561 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetColoring_scope(), CAlgorithm_type_Base::ResetColoring_scope(), and CAlgorithm_type_Base::SetColoring_scope().

m_Columns

list< int > CMatrix_Base::m_Columns

private

Definition at line 298 of file Matrix_.hpp.

Referenced by CMatrix_Base::GetColumns(), CMatrix_Base::ResetColumns(), and CMatrix_Base::SetColumns().

m_Commands

string CCdd_Script_Base::m_Commands

private

Definition at line 239 of file Cdd_Script_.hpp.

Referenced by CCdd_Script_Base::GetCommands(), CCdd_Script_Base::ResetCommands(), and CCdd_Script_Base::SetCommands().

m_Count

int CCdd_repeat_Base::m_Count

private

Definition at line 228 of file Cdd_repeat_.hpp.

Referenced by CCdd_repeat_Base::GetCount(), CCdd_repeat_Base::ResetCount(), and CCdd_repeat_Base::SetCount().

m_Create_date

CRef< TCreate_date > CCdd_Project_Base::m_Create_date

private

Definition at line 492 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetCreate_date(), CCdd_Project_Base::IsSetCreate_date(), CCdd_Project_Base::ResetCreate_date(), and CCdd_Project_Base::SetCreate_date().

m_Csubelementid

string CCdd_book_ref_Base::m_Csubelementid

private

Definition at line 370 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetCsubelementid(), CCdd_book_ref_Base::ResetCsubelementid(), and CCdd_book_ref_Base::SetCsubelementid().

m_CTerminalExt

int CAlgorithm_type_Base::m_CTerminalExt

private

Definition at line 559 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetCTerminalExt(), CAlgorithm_type_Base::ResetCTerminalExt(), and CAlgorithm_type_Base::SetCTerminalExt().

m_Ctrl

int CCdd_Viewer_Base::m_Ctrl

private

Definition at line 243 of file Cdd_Viewer_.hpp.

Referenced by CCdd_Viewer_Base::GetCtrl(), CCdd_Viewer_Base::ResetCtrl(), and CCdd_Viewer_Base::SetCtrl().

m_Curation_status [1/2]

TCuration_status CCdd_descr_Base::m_Curation_status

Definition at line 727 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetCuration_status(), and CCdd_descr_Base::SetCuration_status().

[2/2]

TCuration_status { ... } ::m_Curation_status

Definition at line 727 of file Cdd_descr_.hpp.

m_data [1/7]

list< CRef< CAlign_annot > > CAlign_annot_set_Base::m_data

private

Definition at line 139 of file Align_annot_set_.hpp.

Referenced by CAlign_annot_set_Base::Get(), CAlign_annot_set_Base::Reset(), and CAlign_annot_set_Base::Set().

m_data [2/7]

list< CRef< CCdd_descr > > CCdd_descr_set_Base::m_data

private

Definition at line 139 of file Cdd_descr_set_.hpp.

Referenced by CCdd_descr_set_Base::Get(), CCdd_descr_set_Base::Reset(), and CCdd_descr_set_Base::Set().

m_data [3/7]

list< CRef< CCdd_id > > CCdd_id_set_Base::m_data

private

Definition at line 139 of file Cdd_id_set_.hpp.

Referenced by CCdd_id_set_Base::Get(), CCdd_id_set_Base::Reset(), and CCdd_id_set_Base::Set().

m_data [4/7]

list< CRef< CCdd_org_ref > > CCdd_org_ref_set_Base::m_data

private

Definition at line 139 of file Cdd_org_ref_set_.hpp.

Referenced by CCdd_org_ref_set_Base::Get(), CCdd_org_ref_set_Base::Reset(), and CCdd_org_ref_set_Base::Set().

m_data [5/7]

list< CRef< CCdd_pref_node_descr > > CCdd_pref_node_descr_set_Base::m_data

private

Definition at line 139 of file Cdd_pref_node_descr_set_.hpp.

Referenced by CCdd_pref_node_descr_set_Base::Get(), CCdd_pref_node_descr_set_Base::Reset(), and CCdd_pref_node_descr_set_Base::Set().

m_data [6/7]

list< CRef< CCdd > > CCdd_set_Base::m_data

private

Definition at line 139 of file Cdd_set_.hpp.

Referenced by CCdd_set_Base::Get(), CCdd_set_Base::Reset(), and CCdd_set_Base::Set().

m_data [7/7]

list< CRef< CCdd_tree > > CCdd_tree_set_Base::m_data

private

Definition at line 139 of file Cdd_tree_set_.hpp.

Referenced by CCdd_tree_set_Base::Get(), CCdd_tree_set_Base::Reset(), and CCdd_tree_set_Base::Set().

m_Database

string CGlobal_id_Base::m_Database

private

Definition at line 281 of file Global_id_.hpp.

Referenced by CGlobal_id_Base::GetDatabase(), CGlobal_id_Base::ResetDatabase(), and CGlobal_id_Base::SetDatabase().

m_Description [1/6]

string CAlign_annot_Base::m_Description

private

Definition at line 399 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetDescription(), CAlign_annot_Base::ResetDescription(), and CAlign_annot_Base::SetDescription().

m_Description [2/6]

CRef< TDescription > CCdd_Base::m_Description

private

Definition at line 1078 of file Cdd_.hpp.

Referenced by CCdd_Base::GetDescription(), CCdd_Base::IsSetDescription(), CCdd_Base::ResetDescription(), and CCdd_Base::SetDescription().

m_Description [3/6]

CRef< TDescription > CCdd_pref_nodes_Base::m_Description

private

Definition at line 266 of file Cdd_pref_nodes_.hpp.

Referenced by CCdd_pref_nodes_Base::GetDescription(), CCdd_pref_nodes_Base::IsSetDescription(), CCdd_pref_nodes_Base::ResetDescription(), and CCdd_pref_nodes_Base::SetDescription().

m_Description [4/6]

CRef< TDescription > CCdd_tree_Base::m_Description

private

Definition at line 400 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetDescription(), CCdd_tree_Base::IsSetDescription(), CCdd_tree_Base::ResetDescription(), and CCdd_tree_Base::SetDescription().

m_Description [5/6]

list< CRef< CUpdate_comment > > CReject_id_Base::m_Description

private

Definition at line 177 of file Reject_id_.hpp.

Referenced by CReject_id_Base::GetDescription(), CReject_id_Base::ResetDescription(), and CReject_id_Base::SetDescription().

m_Description [6/6]

list< CRef< CUpdate_comment > > CUpdate_align_Base::m_Description

private

Definition at line 238 of file Update_align_.hpp.

Referenced by CUpdate_align_Base::GetDescription(), CUpdate_align_Base::ResetDescription(), and CUpdate_align_Base::SetDescription().

m_Distance [1/2]

CRef< TDistance > CCdd_Base::m_Distance

private

Definition at line 1086 of file Cdd_.hpp.

Referenced by CCdd_Base::GetDistance(), CCdd_Base::IsSetDistance(), CCdd_Base::ResetDistance(), and CCdd_Base::SetDistance().

m_Distance [2/2]

double CSeqTree_node_Base::m_Distance

private

Definition at line 581 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeqTree_node_Base::GetDistance(), CSeqTree_node_Base::ResetDistance(), and CSeqTree_node_Base::SetDistance().

m_Div_ranks

list< int > CTriangle_Base::m_Div_ranks

private

Definition at line 227 of file Triangle_.hpp.

Referenced by CTriangle_Base::GetDiv_ranks(), CTriangle_Base::ResetDiv_ranks(), and CTriangle_Base::SetDiv_ranks().

m_Elementid

int CCdd_book_ref_Base::m_Elementid

private

Definition at line 367 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetElementid(), CCdd_book_ref_Base::ResetElementid(), and CCdd_book_ref_Base::SetElementid().

m_Evidence

list< CRef< CFeature_evidence > > CAlign_annot_Base::m_Evidence

private

Definition at line 400 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetEvidence(), CAlign_annot_Base::ResetEvidence(), and CAlign_annot_Base::SetEvidence().

m_Features

CRef< TFeatures > CCdd_Base::m_Features

private

Definition at line 1080 of file Cdd_.hpp.

Referenced by CCdd_Base::GetFeatures(), CCdd_Base::IsSetFeatures(), CCdd_Base::ResetFeatures(), and CCdd_Base::SetFeatures().

m_GapExtend

int CAlgorithm_type_Base::m_GapExtend

private

Definition at line 556 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetGapExtend(), CAlgorithm_type_Base::ResetGapExtend(), and CAlgorithm_type_Base::SetGapExtend().

m_GapOpen

int CAlgorithm_type_Base::m_GapOpen

private

Definition at line 555 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetGapOpen(), CAlgorithm_type_Base::ResetGapOpen(), and CAlgorithm_type_Base::SetGapOpen().

m_GapScaleFactor

int CAlgorithm_type_Base::m_GapScaleFactor

private

Definition at line 557 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetGapScaleFactor(), CAlgorithm_type_Base::ResetGapScaleFactor(), and CAlgorithm_type_Base::SetGapScaleFactor().

m_Height

int CCdd_Viewer_Rect_Base::m_Height

private

Definition at line 269 of file Cdd_Viewer_Rect_.hpp.

Referenced by CCdd_Viewer_Rect_Base::GetHeight(), CCdd_Viewer_Rect_Base::ResetHeight(), and CCdd_Viewer_Rect_Base::SetHeight().

m_Id [1/3]

CRef< TId > CCdd_Base::m_Id

private

Definition at line 1077 of file Cdd_.hpp.

Referenced by CCdd_Base::GetId(), CCdd_Base::IsSetId(), CCdd_Base::ResetId(), and CCdd_Base::SetId().

m_Id [2/3]

CRef< TId > CCdd_Project_Base::m_Id

private

Definition at line 490 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetId(), CCdd_Project_Base::IsSetId(), CCdd_Project_Base::ResetId(), and CCdd_Project_Base::SetId().

m_Id [3/3]

CRef< TId > CCdd_tree_Base::m_Id

private

Definition at line 399 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetId(), CCdd_tree_Base::IsSetId(), CCdd_tree_Base::ResetId(), and CCdd_tree_Base::SetId().

m_Ids

list< CRef< CSeq_id > > CReject_id_Base::m_Ids

private

Definition at line 178 of file Reject_id_.hpp.

Referenced by CReject_id_Base::GetIds(), CReject_id_Base::ResetIds(), and CReject_id_Base::SetIds().

m_IsAnnotated [1/2]

bool CSeqTree_node_Base::m_IsAnnotated

private

Definition at line 579 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeqTree_node_Base::GetIsAnnotated(), CSeqTree_node_Base::ResetIsAnnotated(), and CSeqTree_node_Base::SetIsAnnotated().

m_IsAnnotated [2/2]

bool CSequence_tree_Base::m_IsAnnotated

private

Definition at line 274 of file Sequence_tree_.hpp.

Referenced by CSequence_tree_Base::GetIsAnnotated(), CSequence_tree_Base::ResetIsAnnotated(), and CSequence_tree_Base::SetIsAnnotated().

m_Left

int CCdd_Viewer_Rect_Base::m_Left

private

Definition at line 267 of file Cdd_Viewer_Rect_.hpp.

Referenced by CCdd_Viewer_Rect_Base::GetLeft(), CCdd_Viewer_Rect_Base::ResetLeft(), and CCdd_Viewer_Rect_Base::SetLeft().

m_Location [1/2]

CRef< TLocation > CAlign_annot_Base::m_Location

private

Definition at line 398 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetLocation(), CAlign_annot_Base::IsSetLocation(), CAlign_annot_Base::ResetLocation(), and CAlign_annot_Base::SetLocation().

m_Location [2/2]

CRef< TLocation > CCdd_repeat_Base::m_Location

private

Definition at line 229 of file Cdd_repeat_.hpp.

Referenced by CCdd_repeat_Base::GetLocation(), CCdd_repeat_Base::IsSetLocation(), CCdd_repeat_Base::ResetLocation(), and CCdd_repeat_Base::SetLocation().

m_Log

string CCdd_Project_Base::m_Log

private

Definition at line 488 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetLog(), CCdd_Project_Base::ResetLog(), and CCdd_Project_Base::SetLog().

m_Master3d

list< CRef< CSeq_id > > CCdd_Base::m_Master3d

private

Definition at line 1093 of file Cdd_.hpp.

Referenced by CCdd_Base::GetMaster3d(), CCdd_Base::ResetMaster3d(), and CCdd_Base::SetMaster3d().

m_Model_organisms

CRef< TModel_organisms > CCdd_pref_nodes_Base::m_Model_organisms

private

Definition at line 264 of file Cdd_pref_nodes_.hpp.

Referenced by CCdd_pref_nodes_Base::GetModel_organisms(), CCdd_pref_nodes_Base::IsSetModel_organisms(), CCdd_pref_nodes_Base::ResetModel_organisms(), and CCdd_pref_nodes_Base::SetModel_organisms().

m_Motif

string CAlign_annot_Base::m_Motif

private

Definition at line 403 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetMotif(), CAlign_annot_Base::ResetMotif(), and CAlign_annot_Base::SetMotif().

m_Motifuse

int CAlign_annot_Base::m_Motifuse

private

Definition at line 404 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetMotifuse(), CAlign_annot_Base::ResetMotifuse(), and CAlign_annot_Base::SetMotifuse().

m_Name [1/4]

string CCdd_Base::m_Name

private

Definition at line 1076 of file Cdd_.hpp.

Referenced by CCdd_Base::GetName(), CCdd_Base::ResetName(), and CCdd_Base::SetName().

m_Name [2/4]

string CCdd_Script_Base::m_Name

private

Definition at line 238 of file Cdd_Script_.hpp.

Referenced by CCdd_Script_Base::GetName(), CCdd_Script_Base::ResetName(), and CCdd_Script_Base::SetName().

m_Name [3/4]

string CCdd_tree_Base::m_Name

private

Definition at line 398 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetName(), CCdd_tree_Base::ResetName(), and CCdd_tree_Base::SetName().

m_Name [4/4]

string CSeqTree_node_Base::m_Name

private

Definition at line 580 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeqTree_node_Base::GetName(), CSeqTree_node_Base::ResetName(), and CSeqTree_node_Base::SetName().

m_Ncolumns

int CMatrix_Base::m_Ncolumns

private

Definition at line 294 of file Matrix_.hpp.

Referenced by CMatrix_Base::GetNcolumns(), CMatrix_Base::ResetNcolumns(), and CMatrix_Base::SetNcolumns().

m_Neighbors [1/2]

CRef< TNeighbors > CCdd_Base::m_Neighbors

private

Definition at line 1090 of file Cdd_.hpp.

Referenced by CCdd_Base::GetNeighbors(), CCdd_Base::IsSetNeighbors(), CCdd_Base::ResetNeighbors(), and CCdd_Base::SetNeighbors().

m_Neighbors [2/2]

CRef< TNeighbors > CCdd_tree_Base::m_Neighbors

private

Definition at line 404 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetNeighbors(), CCdd_tree_Base::IsSetNeighbors(), CCdd_tree_Base::ResetNeighbors(), and CCdd_tree_Base::SetNeighbors().

m_Nelements

int CTriangle_Base::m_Nelements

private

Definition at line 225 of file Triangle_.hpp.

Referenced by CTriangle_Base::GetNelements(), CTriangle_Base::ResetNelements(), and CTriangle_Base::SetNelements().

m_Note

string CNode_annotation_Base::m_Note

private

Definition at line 187 of file Node_annotation_.hpp.

Referenced by CNode_annotation_Base::GetNote(), CNode_annotation_Base::ResetNote(), and CNode_annotation_Base::SetNote().

m_Nrows

int CMatrix_Base::m_Nrows

private

Definition at line 295 of file Matrix_.hpp.

Referenced by CMatrix_Base::GetNrows(), CMatrix_Base::ResetNrows(), and CMatrix_Base::SetNrows().

m_NTerminalExt

int CAlgorithm_type_Base::m_NTerminalExt

private

Definition at line 558 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetNTerminalExt(), CAlgorithm_type_Base::ResetNTerminalExt(), and CAlgorithm_type_Base::SetNTerminalExt().

m_object [1/12]

NCBI_NS_NCBI::CSerialObject* CCdd_descr_Base::m_object

Definition at line 730 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetAttribution(), CCdd_descr_Base::GetBook_ref(), CCdd_descr_Base::GetCreate_date(), CCdd_descr_Base::GetOld_root(), CCdd_descr_Base::GetReference(), CCdd_descr_Base::GetRepeats(), CCdd_descr_Base::GetSource_id(), CCdd_descr_Base::GetTax_source(), CCdd_descr_Base::GetUpdate_date(), CCdd_descr_Base::ResetSelection(), CCdd_descr_Base::SetAttribution(), CCdd_descr_Base::SetBook_ref(), CCdd_descr_Base::SetCreate_date(), CCdd_descr_Base::SetOld_root(), CCdd_descr_Base::SetReference(), CCdd_descr_Base::SetRepeats(), CCdd_descr_Base::SetSource_id(), CCdd_descr_Base::SetTax_source(), and CCdd_descr_Base::SetUpdate_date().

[2/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 730 of file Cdd_descr_.hpp.

m_object [3/12]

NCBI_NS_NCBI::CSerialObject* CCdd_id_Base::m_object

Definition at line 217 of file Cdd_id_.hpp.

Referenced by CCdd_id_Base::DoSelect(), CCdd_id_Base::GetGid(), CCdd_id_Base::ResetSelection(), and CCdd_id_Base::SetGid().

[4/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 217 of file Cdd_id_.hpp.

m_object [5/12]

NCBI_NS_NCBI::CSerialObject* CCdd_pref_node_descr_Base::m_object

Definition at line 221 of file Cdd_pref_node_descr_.hpp.

Referenced by CCdd_pref_node_descr_Base::DoSelect(), CCdd_pref_node_descr_Base::GetCreate_date(), CCdd_pref_node_descr_Base::ResetSelection(), and CCdd_pref_node_descr_Base::SetCreate_date().

[6/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 221 of file Cdd_pref_node_descr_.hpp.

m_object [7/12]

NCBI_NS_NCBI::CSerialObject* CFeature_evidence_Base::m_object

Definition at line 308 of file Feature_evidence_.hpp.

Referenced by CFeature_evidence_Base::DoSelect(), CFeature_evidence_Base::GetBook_ref(), CFeature_evidence_Base::GetBsannot(), CFeature_evidence_Base::GetReference(), CFeature_evidence_Base::GetSeqfeat(), CFeature_evidence_Base::ResetSelection(), CFeature_evidence_Base::SetBook_ref(), CFeature_evidence_Base::SetBsannot(), CFeature_evidence_Base::SetReference(), and CFeature_evidence_Base::SetSeqfeat().

[8/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 308 of file Feature_evidence_.hpp.

[9/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 355 of file SeqTree_node_.hpp.

m_object [10/12]

NCBI_NS_NCBI::CSerialObject* CSeqTree_node_Base::C_Children::m_object

Definition at line 355 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_CHOICE_INFO(), CSeqTree_node_Base::C_Children::DoSelect(), CSeqTree_node_Base::C_Children::GetFootprint(), CSeqTree_node_Base::C_Children::ResetSelection(), and CSeqTree_node_Base::C_Children::SetFootprint().

[11/12]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 310 of file Update_comment_.hpp.

m_object [12/12]

NCBI_NS_NCBI::CSerialObject* CUpdate_comment_Base::m_object

Definition at line 310 of file Update_comment_.hpp.

Referenced by CUpdate_comment_Base::DoSelect(), CUpdate_comment_Base::GetAddthis(), CUpdate_comment_Base::GetReference(), CUpdate_comment_Base::GetReject_loc(), CUpdate_comment_Base::GetReplaces(), CUpdate_comment_Base::ResetSelection(), CUpdate_comment_Base::SetAddthis(), CUpdate_comment_Base::SetReference(), CUpdate_comment_Base::SetReject_loc(), and CUpdate_comment_Base::SetReplaces().

m_Optional_nodes

CRef< TOptional_nodes > CCdd_pref_nodes_Base::m_Optional_nodes

private

Definition at line 265 of file Cdd_pref_nodes_.hpp.

Referenced by CCdd_pref_nodes_Base::GetOptional_nodes(), CCdd_pref_nodes_Base::IsSetOptional_nodes(), CCdd_pref_nodes_Base::ResetOptional_nodes(), and CCdd_pref_nodes_Base::SetOptional_nodes().

m_Parent [1/2]

CRef< TParent > CCdd_Base::m_Parent

private

Definition at line 1087 of file Cdd_.hpp.

Referenced by CCdd_Base::GetParent(), CCdd_Base::IsSetParent(), CCdd_Base::ResetParent(), and CCdd_Base::SetParent().

m_Parent [2/2]

CRef< TParent > CCdd_tree_Base::m_Parent

private

Definition at line 401 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetParent(), CCdd_tree_Base::IsSetParent(), CCdd_tree_Base::ResetParent(), and CCdd_tree_Base::SetParent().

m_Parent_tax_id

int CCdd_org_ref_Base::m_Parent_tax_id

private

Definition at line 273 of file Cdd_org_ref_.hpp.

Referenced by CCdd_org_ref_Base::GetParent_tax_id(), CCdd_org_ref_Base::ResetParent_tax_id(), and CCdd_org_ref_Base::SetParent_tax_id().

m_Parent_type

int CDomain_parent_Base::m_Parent_type

private

Definition at line 254 of file Domain_parent_.hpp.

Referenced by CDomain_parent_Base::GetParent_type(), CDomain_parent_Base::ResetParent_type(), and CDomain_parent_Base::SetParent_type().

m_Parentid

CRef< TParentid > CDomain_parent_Base::m_Parentid

private

Definition at line 255 of file Domain_parent_.hpp.

Referenced by CDomain_parent_Base::GetParentid(), CDomain_parent_Base::IsSetParentid(), CDomain_parent_Base::ResetParentid(), and CDomain_parent_Base::SetParentid().

m_Pending

list< CRef< CUpdate_align > > CCdd_Base::m_Pending

private

Definition at line 1091 of file Cdd_.hpp.

Referenced by CCdd_Base::GetPending(), CCdd_Base::ResetPending(), and CCdd_Base::SetPending().

m_Posfreq

CRef< TPosfreq > CCdd_Base::m_Posfreq

private

Definition at line 1084 of file Cdd_.hpp.

Referenced by CCdd_Base::GetPosfreq(), CCdd_Base::IsSetPosfreq(), CCdd_Base::ResetPosfreq(), and CCdd_Base::SetPosfreq().

m_Preferred_nodes

CRef< TPreferred_nodes > CCdd_pref_nodes_Base::m_Preferred_nodes

private

Definition at line 263 of file Cdd_pref_nodes_.hpp.

Referenced by CCdd_pref_nodes_Base::GetPreferred_nodes(), CCdd_pref_nodes_Base::IsSetPreferred_nodes(), CCdd_pref_nodes_Base::ResetPreferred_nodes(), and CCdd_pref_nodes_Base::SetPreferred_nodes().

m_PresentInChildCD

string CNode_annotation_Base::m_PresentInChildCD

private

Definition at line 186 of file Node_annotation_.hpp.

Referenced by CNode_annotation_Base::GetPresentInChildCD(), CNode_annotation_Base::ResetPresentInChildCD(), and CNode_annotation_Base::SetPresentInChildCD().

m_Profile_range

CRef< TProfile_range > CCdd_Base::m_Profile_range

private

Definition at line 1082 of file Cdd_.hpp.

Referenced by CCdd_Base::GetProfile_range(), CCdd_Base::IsSetProfile_range(), CCdd_Base::ResetProfile_range(), and CCdd_Base::SetProfile_range().

m_Project_id

int CCdd_Project_Base::m_Project_id

private

Definition at line 494 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetProject_id(), CCdd_Project_Base::ResetProject_id(), and CCdd_Project_Base::SetProject_id().

m_Rank

string CCdd_org_ref_Base::m_Rank

private

Definition at line 274 of file Cdd_org_ref_.hpp.

Referenced by CCdd_org_ref_Base::GetRank(), CCdd_org_ref_Base::ResetRank(), and CCdd_org_ref_Base::SetRank().

m_Readonly_status [1/2]

TReadonly_status CCdd_descr_Base::m_Readonly_status

Definition at line 728 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetReadonly_status(), and CCdd_descr_Base::SetReadonly_status().

[2/2]

TReadonly_status { ... } ::m_Readonly_status

Definition at line 728 of file Cdd_descr_.hpp.

m_Rect

CRef< TRect > CCdd_Viewer_Base::m_Rect

private

Definition at line 244 of file Cdd_Viewer_.hpp.

Referenced by CCdd_Viewer_Base::GetRect(), CCdd_Viewer_Base::IsSetRect(), CCdd_Viewer_Base::ResetRect(), and CCdd_Viewer_Base::SetRect().

m_Reference

CRef< TReference > CCdd_org_ref_Base::m_Reference

private

Definition at line 271 of file Cdd_org_ref_.hpp.

Referenced by CCdd_org_ref_Base::GetReference(), CCdd_org_ref_Base::IsSetReference(), CCdd_org_ref_Base::ResetReference(), and CCdd_org_ref_Base::SetReference().

m_Rejects

list< CRef< CReject_id > > CCdd_Base::m_Rejects

private

Definition at line 1092 of file Cdd_.hpp.

Referenced by CCdd_Base::GetRejects(), CCdd_Base::ResetRejects(), and CCdd_Base::SetRejects().

m_Release

string CGlobal_id_Base::m_Release

private

Definition at line 279 of file Global_id_.hpp.

Referenced by CGlobal_id_Base::GetRelease(), CGlobal_id_Base::ResetRelease(), and CGlobal_id_Base::SetRelease().

m_Rids

list< string > CCdd_Project_Base::m_Rids

private

Definition at line 491 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetRids(), CCdd_Project_Base::ResetRids(), and CCdd_Project_Base::SetRids().

m_Root

CRef< TRoot > CSequence_tree_Base::m_Root

private

Definition at line 275 of file Sequence_tree_.hpp.

Referenced by CSequence_tree_Base::GetRoot(), CSequence_tree_Base::IsSetRoot(), CSequence_tree_Base::ResetRoot(), and CSequence_tree_Base::SetRoot().

m_Row_labels

list< string > CMatrix_Base::m_Row_labels

private

Definition at line 296 of file Matrix_.hpp.

Referenced by CMatrix_Base::GetRow_labels(), CMatrix_Base::ResetRow_labels(), and CMatrix_Base::SetRow_labels().

m_RowId

int CSeqTree_node_Base::C_Children::C_Footprint::m_RowId

private

Definition at line 226 of file SeqTree_node_.hpp.

m_Scale_factor

int CMatrix_Base::m_Scale_factor

private

Definition at line 297 of file Matrix_.hpp.

Referenced by CMatrix_Base::GetScale_factor(), CMatrix_Base::ResetScale_factor(), and CMatrix_Base::SetScale_factor().

m_Score_Matrix

int CAlgorithm_type_Base::m_Score_Matrix

private

Definition at line 554 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetScore_Matrix(), CAlgorithm_type_Base::ResetScore_Matrix(), and CAlgorithm_type_Base::SetScore_Matrix().

m_Scoremat

CRef< TScoremat > CCdd_Base::m_Scoremat

private

Definition at line 1085 of file Cdd_.hpp.

Referenced by CCdd_Base::GetScoremat(), CCdd_Base::IsSetScoremat(), CCdd_Base::ResetScoremat(), and CCdd_Base::SetScoremat().

m_Scoreparams

CRef< TScoreparams > CCdd_Base::m_Scoreparams

private

Definition at line 1098 of file Cdd_.hpp.

Referenced by CCdd_Base::GetScoreparams(), CCdd_Base::IsSetScoreparams(), CCdd_Base::ResetScoreparams(), and CCdd_Base::SetScoreparams().

m_Scores

CRef< TScores > CTriangle_Base::m_Scores

private

Definition at line 226 of file Triangle_.hpp.

Referenced by CTriangle_Base::GetScores(), CTriangle_Base::IsSetScores(), CTriangle_Base::ResetScores(), and CTriangle_Base::SetScores().

m_Scoring_Scheme

int CAlgorithm_type_Base::m_Scoring_Scheme

private

Definition at line 552 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetScoring_Scheme(), CAlgorithm_type_Base::ResetScoring_Scheme(), and CAlgorithm_type_Base::SetScoring_Scheme().

m_Scrapbook [1/2]

NCBI_NS_NCBI::CUnionBuffer<TScrapbook> CCdd_descr_Base::m_Scrapbook

Definition at line 726 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetScrapbook(), CCdd_descr_Base::ResetSelection(), and CCdd_descr_Base::SetScrapbook().

[2/2]

NCBI_NS_NCBI::CUnionBuffer<TScrapbook> { ... } ::m_Scrapbook

Definition at line 726 of file Cdd_descr_.hpp.

m_Scripts

list< CRef< CCdd_Script > > CCdd_Project_Base::m_Scripts

private

Definition at line 489 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetScripts(), CCdd_Project_Base::ResetScripts(), and CCdd_Project_Base::SetScripts().

m_Seqannot [1/3]

list< CRef< CSeq_annot > > CCdd_Base::m_Seqannot

private

Definition at line 1079 of file Cdd_.hpp.

Referenced by CCdd_Base::GetSeqannot(), CCdd_Base::ResetSeqannot(), and CCdd_Base::SetSeqannot().

m_Seqannot [2/3]

CRef< TSeqannot > CDomain_parent_Base::m_Seqannot

private

Definition at line 256 of file Domain_parent_.hpp.

Referenced by CDomain_parent_Base::GetSeqannot(), CDomain_parent_Base::IsSetSeqannot(), CDomain_parent_Base::ResetSeqannot(), and CDomain_parent_Base::SetSeqannot().

m_Seqannot [3/3]

CRef< TSeqannot > CUpdate_align_Base::m_Seqannot

private

Definition at line 239 of file Update_align_.hpp.

Referenced by CUpdate_align_Base::GetSeqannot(), CUpdate_align_Base::IsSetSeqannot(), CUpdate_align_Base::ResetSeqannot(), and CUpdate_align_Base::SetSeqannot().

m_SeqRange

CRef< TSeqRange > CSeqTree_node_Base::C_Children::C_Footprint::m_SeqRange

private

Definition at line 225 of file SeqTree_node_.hpp.

Referenced by CSeqTree_node_Base::C_Children::C_Footprint::IsSetSeqRange(), and CSeqTree_node_Base::C_Children::C_Footprint::ResetSeqRange().

m_Seqtree

CRef< TSeqtree > CCdd_Base::m_Seqtree

private

Definition at line 1099 of file Cdd_.hpp.

Referenced by CCdd_Base::GetSeqtree(), CCdd_Base::IsSetSeqtree(), CCdd_Base::ResetSeqtree(), and CCdd_Base::SetSeqtree().

m_Sequences

CRef< TSequences > CCdd_Base::m_Sequences

private

Definition at line 1081 of file Cdd_.hpp.

Referenced by CCdd_Base::GetSequences(), CCdd_Base::IsSetSequences(), CCdd_Base::ResetSequences(), and CCdd_Base::SetSequences().

m_set_State [1/29]

Uint4 CAlgorithm_type_Base::m_set_State[1]

private

Definition at line 551 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::CAlgorithm_type_Base(), CAlgorithm_type_Base::IsSetClustering_Method(), CAlgorithm_type_Base::IsSetColoring_scope(), CAlgorithm_type_Base::IsSetCTerminalExt(), CAlgorithm_type_Base::IsSetGapExtend(), CAlgorithm_type_Base::IsSetGapOpen(), CAlgorithm_type_Base::IsSetGapScaleFactor(), CAlgorithm_type_Base::IsSetNTerminalExt(), CAlgorithm_type_Base::IsSetScore_Matrix(), CAlgorithm_type_Base::IsSetScoring_Scheme(), CAlgorithm_type_Base::IsSetTree_scope(), CAlgorithm_type_Base::ResetClustering_Method(), CAlgorithm_type_Base::ResetColoring_scope(), CAlgorithm_type_Base::ResetCTerminalExt(), CAlgorithm_type_Base::ResetGapExtend(), CAlgorithm_type_Base::ResetGapOpen(), CAlgorithm_type_Base::ResetGapScaleFactor(), CAlgorithm_type_Base::ResetNTerminalExt(), CAlgorithm_type_Base::ResetScore_Matrix(), CAlgorithm_type_Base::ResetScoring_Scheme(), CAlgorithm_type_Base::ResetTree_scope(), CAlgorithm_type_Base::SetClustering_Method(), CAlgorithm_type_Base::SetColoring_scope(), CAlgorithm_type_Base::SetCTerminalExt(), CAlgorithm_type_Base::SetGapExtend(), CAlgorithm_type_Base::SetGapOpen(), CAlgorithm_type_Base::SetGapScaleFactor(), CAlgorithm_type_Base::SetNTerminalExt(), CAlgorithm_type_Base::SetScore_Matrix(), CAlgorithm_type_Base::SetScoring_Scheme(), and CAlgorithm_type_Base::SetTree_scope().

m_set_State [2/29]

Uint4 CAlign_annot_Base::m_set_State[1]

private

Definition at line 397 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::CAlign_annot_Base(), CAlign_annot_Base::IsSetAliases(), CAlign_annot_Base::IsSetDescription(), CAlign_annot_Base::IsSetEvidence(), CAlign_annot_Base::IsSetMotif(), CAlign_annot_Base::IsSetMotifuse(), CAlign_annot_Base::IsSetType(), CAlign_annot_Base::ResetAliases(), CAlign_annot_Base::ResetDescription(), CAlign_annot_Base::ResetEvidence(), CAlign_annot_Base::ResetMotif(), CAlign_annot_Base::ResetMotifuse(), CAlign_annot_Base::ResetType(), CAlign_annot_Base::SetAliases(), CAlign_annot_Base::SetDescription(), CAlign_annot_Base::SetEvidence(), CAlign_annot_Base::SetMotif(), CAlign_annot_Base::SetMotifuse(), and CAlign_annot_Base::SetType().

m_set_State [3/29]

Uint4 CAlign_annot_set_Base::m_set_State[1]

private

Definition at line 138 of file Align_annot_set_.hpp.

Referenced by CAlign_annot_set_Base::CAlign_annot_set_Base(), CAlign_annot_set_Base::IsSet(), CAlign_annot_set_Base::Reset(), and CAlign_annot_set_Base::Set().

m_set_State [4/29]

Uint4 CCdd_book_ref_Base::m_set_State[1]

private

Definition at line 364 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::CCdd_book_ref_Base(), CCdd_book_ref_Base::IsSetBookname(), CCdd_book_ref_Base::IsSetCelementid(), CCdd_book_ref_Base::IsSetCsubelementid(), CCdd_book_ref_Base::IsSetElementid(), CCdd_book_ref_Base::IsSetSubelementid(), CCdd_book_ref_Base::IsSetTextelement(), CCdd_book_ref_Base::ResetBookname(), CCdd_book_ref_Base::ResetCelementid(), CCdd_book_ref_Base::ResetCsubelementid(), CCdd_book_ref_Base::ResetElementid(), CCdd_book_ref_Base::ResetSubelementid(), CCdd_book_ref_Base::ResetTextelement(), CCdd_book_ref_Base::SetBookname(), CCdd_book_ref_Base::SetCelementid(), CCdd_book_ref_Base::SetCsubelementid(), CCdd_book_ref_Base::SetElementid(), CCdd_book_ref_Base::SetSubelementid(), and CCdd_book_ref_Base::SetTextelement().

m_set_State [5/29]

Uint4 CCdd_descr_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_descr_set_.hpp.

Referenced by CCdd_descr_set_Base::CCdd_descr_set_Base(), CCdd_descr_set_Base::IsSet(), CCdd_descr_set_Base::Reset(), and CCdd_descr_set_Base::Set().

m_set_State [6/29]

Uint4 CCdd_id_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_id_set_.hpp.

Referenced by CCdd_id_set_Base::CCdd_id_set_Base(), CCdd_id_set_Base::IsSet(), CCdd_id_set_Base::Reset(), and CCdd_id_set_Base::Set().

m_set_State [7/29]

Uint4 CCdd_org_ref_Base::m_set_State[1]

private

Definition at line 270 of file Cdd_org_ref_.hpp.

Referenced by CCdd_org_ref_Base::CCdd_org_ref_Base(), CCdd_org_ref_Base::IsSetActive(), CCdd_org_ref_Base::IsSetParent_tax_id(), CCdd_org_ref_Base::IsSetRank(), CCdd_org_ref_Base::ResetActive(), CCdd_org_ref_Base::ResetParent_tax_id(), CCdd_org_ref_Base::ResetRank(), CCdd_org_ref_Base::SetActive(), CCdd_org_ref_Base::SetParent_tax_id(), and CCdd_org_ref_Base::SetRank().

m_set_State [8/29]

Uint4 CCdd_org_ref_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_org_ref_set_.hpp.

Referenced by CCdd_org_ref_set_Base::CCdd_org_ref_set_Base(), CCdd_org_ref_set_Base::IsSet(), CCdd_org_ref_set_Base::Reset(), and CCdd_org_ref_set_Base::Set().

m_set_State [9/29]

Uint4 CCdd_pref_node_descr_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_pref_node_descr_set_.hpp.

Referenced by CCdd_pref_node_descr_set_Base::CCdd_pref_node_descr_set_Base(), CCdd_pref_node_descr_set_Base::IsSet(), CCdd_pref_node_descr_set_Base::Reset(), and CCdd_pref_node_descr_set_Base::Set().

m_set_State [10/29]

Uint4 CCdd_pref_nodes_Base::m_set_State[1]

private

Definition at line 262 of file Cdd_pref_nodes_.hpp.

Referenced by CCdd_pref_nodes_Base::CCdd_pref_nodes_Base().

m_set_State [11/29]

Uint4 CCdd_Project_Base::m_set_State[1]

private

Definition at line 484 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::CCdd_Project_Base(), CCdd_Project_Base::IsSetCdcolor(), CCdd_Project_Base::IsSetCds(), CCdd_Project_Base::IsSetLog(), CCdd_Project_Base::IsSetProject_id(), CCdd_Project_Base::IsSetRids(), CCdd_Project_Base::IsSetScripts(), CCdd_Project_Base::IsSetViewers(), CCdd_Project_Base::ResetCdcolor(), CCdd_Project_Base::ResetCds(), CCdd_Project_Base::ResetLog(), CCdd_Project_Base::ResetProject_id(), CCdd_Project_Base::ResetRids(), CCdd_Project_Base::ResetScripts(), CCdd_Project_Base::ResetViewers(), CCdd_Project_Base::SetCdcolor(), CCdd_Project_Base::SetCds(), CCdd_Project_Base::SetLog(), CCdd_Project_Base::SetProject_id(), CCdd_Project_Base::SetRids(), CCdd_Project_Base::SetScripts(), and CCdd_Project_Base::SetViewers().

m_set_State [12/29]

Uint4 CCdd_repeat_Base::m_set_State[1]

private

Definition at line 227 of file Cdd_repeat_.hpp.

Referenced by CCdd_repeat_Base::CCdd_repeat_Base(), CCdd_repeat_Base::IsSetAvglen(), CCdd_repeat_Base::IsSetCount(), CCdd_repeat_Base::ResetAvglen(), CCdd_repeat_Base::ResetCount(), CCdd_repeat_Base::SetAvglen(), and CCdd_repeat_Base::SetCount().

m_set_State [13/29]

Uint4 CCdd_Script_Base::m_set_State[1]

private

Definition at line 236 of file Cdd_Script_.hpp.

Referenced by CCdd_Script_Base::CCdd_Script_Base(), CCdd_Script_Base::IsSetCommands(), CCdd_Script_Base::IsSetName(), CCdd_Script_Base::IsSetType(), CCdd_Script_Base::ResetCommands(), CCdd_Script_Base::ResetName(), CCdd_Script_Base::ResetType(), CCdd_Script_Base::SetCommands(), CCdd_Script_Base::SetName(), and CCdd_Script_Base::SetType().

m_set_State [14/29]

Uint4 CCdd_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_set_.hpp.

Referenced by CCdd_set_Base::CCdd_set_Base(), CCdd_set_Base::IsSet(), CCdd_set_Base::Reset(), and CCdd_set_Base::Set().

m_set_State [15/29]

Uint4 CCdd_tree_Base::m_set_State[1]

private

Definition at line 397 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::CCdd_tree_Base(), CCdd_tree_Base::IsSetName(), CCdd_tree_Base::ResetName(), and CCdd_tree_Base::SetName().

m_set_State [16/29]

Uint4 CCdd_tree_set_Base::m_set_State[1]

private

Definition at line 138 of file Cdd_tree_set_.hpp.

Referenced by CCdd_tree_set_Base::CCdd_tree_set_Base(), CCdd_tree_set_Base::IsSet(), CCdd_tree_set_Base::Reset(), and CCdd_tree_set_Base::Set().

m_set_State [17/29]

Uint4 CCdd_Viewer_Base::m_set_State[1]

private

Definition at line 242 of file Cdd_Viewer_.hpp.

Referenced by CCdd_Viewer_Base::CCdd_Viewer_Base(), CCdd_Viewer_Base::IsSetAccessions(), CCdd_Viewer_Base::IsSetCtrl(), CCdd_Viewer_Base::ResetAccessions(), CCdd_Viewer_Base::ResetCtrl(), CCdd_Viewer_Base::SetAccessions(), and CCdd_Viewer_Base::SetCtrl().

m_set_State [18/29]

Uint4 CCdd_Viewer_Rect_Base::m_set_State[1]

private

Definition at line 265 of file Cdd_Viewer_Rect_.hpp.

Referenced by CCdd_Viewer_Rect_Base::CCdd_Viewer_Rect_Base(), CCdd_Viewer_Rect_Base::IsSetHeight(), CCdd_Viewer_Rect_Base::IsSetLeft(), CCdd_Viewer_Rect_Base::IsSetTop(), CCdd_Viewer_Rect_Base::IsSetWidth(), CCdd_Viewer_Rect_Base::ResetHeight(), CCdd_Viewer_Rect_Base::ResetLeft(), CCdd_Viewer_Rect_Base::ResetTop(), CCdd_Viewer_Rect_Base::ResetWidth(), CCdd_Viewer_Rect_Base::SetHeight(), CCdd_Viewer_Rect_Base::SetLeft(), CCdd_Viewer_Rect_Base::SetTop(), and CCdd_Viewer_Rect_Base::SetWidth().

m_set_State [19/29]

Uint4 CDomain_parent_Base::m_set_State[1]

private

Definition at line 253 of file Domain_parent_.hpp.

Referenced by CDomain_parent_Base::CDomain_parent_Base(), CDomain_parent_Base::IsSetParent_type(), CDomain_parent_Base::ResetParent_type(), and CDomain_parent_Base::SetParent_type().

m_set_State [20/29]

Uint4 CGlobal_id_Base::m_set_State[1]

private

Definition at line 277 of file Global_id_.hpp.

Referenced by CGlobal_id_Base::CGlobal_id_Base(), CGlobal_id_Base::IsSetAccession(), CGlobal_id_Base::IsSetDatabase(), CGlobal_id_Base::IsSetRelease(), CGlobal_id_Base::IsSetVersion(), CGlobal_id_Base::ResetAccession(), CGlobal_id_Base::ResetDatabase(), CGlobal_id_Base::ResetRelease(), CGlobal_id_Base::ResetVersion(), CGlobal_id_Base::SetAccession(), CGlobal_id_Base::SetDatabase(), CGlobal_id_Base::SetRelease(), and CGlobal_id_Base::SetVersion().

m_set_State [21/29]

Uint4 CMatrix_Base::m_set_State

private

Definition at line 293 of file Matrix_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), BEGIN_NAMED_CLASS_INFO(), CMatrix_Base::C_Attlist::C_Attlist(), CMatrix_Base::CMatrix_Base(), CMatrix_Base::C_Attlist::IsSetClass(), CMatrix_Base::IsSetColumns(), CMatrix_Base::IsSetContExp(), CMatrix_Base::C_Attlist::IsSetDefinitionURL(), CMatrix_Base::C_Attlist::IsSetEncoding(), CMatrix_Base::C_Attlist::IsSetHref(), CMatrix_Base::IsSetNcolumns(), CMatrix_Base::IsSetNrows(), CMatrix_Base::IsSetRow_labels(), CMatrix_Base::IsSetScale_factor(), CMatrix_Base::C_Attlist::IsSetStyle(), CMatrix_Base::C_Attlist::IsSetXref(), CMatrix_Base::C_Attlist::ResetClass(), CMatrix_Base::ResetColumns(), CMatrix_Base::ResetContExp(), CMatrix_Base::C_Attlist::ResetDefinitionURL(), CMatrix_Base::C_Attlist::ResetEncoding(), CMatrix_Base::C_Attlist::ResetHref(), CMatrix_Base::ResetNcolumns(), CMatrix_Base::ResetNrows(), CMatrix_Base::ResetRow_labels(), CMatrix_Base::ResetScale_factor(), CMatrix_Base::C_Attlist::ResetStyle(), CMatrix_Base::C_Attlist::ResetXref(), CMatrix_Base::C_Attlist::SetClass(), CMatrix_Base::SetColumns(), CMatrix_Base::SetContExp(), CMatrix_Base::C_Attlist::SetDefinitionURL(), CMatrix_Base::C_Attlist::SetEncoding(), CMatrix_Base::C_Attlist::SetHref(), CMatrix_Base::C_Attlist::SetId(), CMatrix_Base::SetNcolumns(), CMatrix_Base::SetNrows(), CMatrix_Base::SetRow_labels(), CMatrix_Base::SetScale_factor(), CMatrix_Base::C_Attlist::SetStyle(), and CMatrix_Base::C_Attlist::SetXref().

m_set_State [22/29]

Uint4 CNode_annotation_Base::m_set_State[1]

private

Definition at line 185 of file Node_annotation_.hpp.

Referenced by CNode_annotation_Base::CNode_annotation_Base(), CNode_annotation_Base::IsSetNote(), CNode_annotation_Base::IsSetPresentInChildCD(), CNode_annotation_Base::ResetNote(), CNode_annotation_Base::ResetPresentInChildCD(), CNode_annotation_Base::SetNote(), and CNode_annotation_Base::SetPresentInChildCD().

m_set_State [23/29]

Uint4 CReject_id_Base::m_set_State[1]

private

Definition at line 176 of file Reject_id_.hpp.

Referenced by CReject_id_Base::CReject_id_Base(), CReject_id_Base::IsSetDescription(), CReject_id_Base::IsSetIds(), CReject_id_Base::ResetDescription(), CReject_id_Base::ResetIds(), CReject_id_Base::SetDescription(), and CReject_id_Base::SetIds().

m_set_State [24/29]

Uint4 CSeqTree_node_Base::C_Children::C_Footprint::m_set_State[1]

private

Definition at line 224 of file SeqTree_node_.hpp.

Referenced by CSeqTree_node_Base::C_Children::C_Footprint::C_Footprint().

m_set_State [25/29]

Uint4 CSeqTree_node_Base::m_set_State[1]

private

Definition at line 578 of file SeqTree_node_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), BEGIN_NAMED_CLASS_INFO(), CSeqTree_node_Base::CSeqTree_node_Base(), CSeqTree_node_Base::IsSetDistance(), CSeqTree_node_Base::IsSetIsAnnotated(), CSeqTree_node_Base::IsSetName(), CSeqTree_node_Base::C_Children::C_Footprint::IsSetRowId(), CSeqTree_node_Base::ResetDistance(), CSeqTree_node_Base::ResetIsAnnotated(), CSeqTree_node_Base::ResetName(), CSeqTree_node_Base::C_Children::C_Footprint::ResetRowId(), CSeqTree_node_Base::SetDistance(), CSeqTree_node_Base::SetIsAnnotated(), CSeqTree_node_Base::SetName(), and CSeqTree_node_Base::C_Children::C_Footprint::SetRowId().

m_set_State [26/29]

Uint4 CSequence_tree_Base::m_set_State[1]

private

Definition at line 271 of file Sequence_tree_.hpp.

Referenced by CSequence_tree_Base::CSequence_tree_Base(), CSequence_tree_Base::IsSetCdAccession(), CSequence_tree_Base::IsSetIsAnnotated(), CSequence_tree_Base::ResetCdAccession(), CSequence_tree_Base::ResetIsAnnotated(), CSequence_tree_Base::SetCdAccession(), and CSequence_tree_Base::SetIsAnnotated().

m_set_State [27/29]

Uint4 CTriangle_Base::m_set_State[1]

private

Definition at line 224 of file Triangle_.hpp.

Referenced by CTriangle_Base::CTriangle_Base(), CTriangle_Base::IsSetDiv_ranks(), CTriangle_Base::IsSetNelements(), CTriangle_Base::ResetDiv_ranks(), CTriangle_Base::ResetNelements(), CTriangle_Base::SetDiv_ranks(), and CTriangle_Base::SetNelements().

m_set_State [28/29]

Uint4 CUpdate_align_Base::m_set_State[1]

private

Definition at line 237 of file Update_align_.hpp.

Referenced by CUpdate_align_Base::CUpdate_align_Base(), CUpdate_align_Base::IsSetDescription(), CUpdate_align_Base::IsSetType(), CUpdate_align_Base::ResetDescription(), CUpdate_align_Base::ResetType(), CUpdate_align_Base::SetDescription(), and CUpdate_align_Base::SetType().

m_set_State [29/29]

Uint4 CCdd_Base::m_set_State[2]

private

Definition at line 1075 of file Cdd_.hpp.

Referenced by CCdd_Base::CCdd_Base(), CCdd_Base::IsSetAncestors(), CCdd_Base::IsSetMaster3d(), CCdd_Base::IsSetName(), CCdd_Base::IsSetPending(), CCdd_Base::IsSetRejects(), CCdd_Base::IsSetSeqannot(), CCdd_Base::ResetAncestors(), CCdd_Base::ResetMaster3d(), CCdd_Base::ResetName(), CCdd_Base::ResetPending(), CCdd_Base::ResetRejects(), CCdd_Base::ResetSeqannot(), CCdd_Base::SetAncestors(), CCdd_Base::SetMaster3d(), CCdd_Base::SetName(), CCdd_Base::SetPending(), CCdd_Base::SetRejects(), and CCdd_Base::SetSeqannot().

m_Siblings [1/2]

CRef< TSiblings > CCdd_Base::m_Siblings

private

Definition at line 1089 of file Cdd_.hpp.

Referenced by CCdd_Base::GetSiblings(), CCdd_Base::IsSetSiblings(), CCdd_Base::ResetSiblings(), and CCdd_Base::SetSiblings().

m_Siblings [2/2]

CRef< TSiblings > CCdd_tree_Base::m_Siblings

private

Definition at line 403 of file Cdd_tree_.hpp.

Referenced by CCdd_tree_Base::GetSiblings(), CCdd_tree_Base::IsSetSiblings(), CCdd_tree_Base::ResetSiblings(), and CCdd_tree_Base::SetSiblings().

m_Status [1/2]

TStatus CCdd_descr_Base::m_Status

Definition at line 725 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetStatus(), and CCdd_descr_Base::SetStatus().

[2/2]

TStatus { ... } ::m_Status

Definition at line 725 of file Cdd_descr_.hpp.

m_string [1/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CCdd_descr_Base::m_string

Definition at line 729 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::DoSelect(), CCdd_descr_Base::GetCategory(), CCdd_descr_Base::GetComment(), CCdd_descr_Base::GetOthername(), CCdd_descr_Base::GetSource(), CCdd_descr_Base::GetTitle(), CCdd_descr_Base::ResetSelection(), CCdd_descr_Base::SetCategory(), CCdd_descr_Base::SetComment(), CCdd_descr_Base::SetOthername(), CCdd_descr_Base::SetSource(), and CCdd_descr_Base::SetTitle().

[2/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 729 of file Cdd_descr_.hpp.

m_string [3/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CCdd_pref_node_descr_Base::m_string

Definition at line 220 of file Cdd_pref_node_descr_.hpp.

Referenced by CCdd_pref_node_descr_Base::DoSelect(), CCdd_pref_node_descr_Base::GetDescription(), CCdd_pref_node_descr_Base::ResetSelection(), and CCdd_pref_node_descr_Base::SetDescription().

[4/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 220 of file Cdd_pref_node_descr_.hpp.

m_string [5/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CFeature_evidence_Base::m_string

Definition at line 307 of file Feature_evidence_.hpp.

Referenced by CFeature_evidence_Base::DoSelect(), CFeature_evidence_Base::GetComment(), CFeature_evidence_Base::ResetSelection(), and CFeature_evidence_Base::SetComment().

[6/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 307 of file Feature_evidence_.hpp.

[7/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 309 of file Update_comment_.hpp.

m_string [8/8]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CUpdate_comment_Base::m_string

Definition at line 309 of file Update_comment_.hpp.

Referenced by CUpdate_comment_Base::DoSelect(), CUpdate_comment_Base::GetComment(), CUpdate_comment_Base::ResetSelection(), and CUpdate_comment_Base::SetComment().

m_Style_dictionary

CRef< TStyle_dictionary > CCdd_Base::m_Style_dictionary

private

Definition at line 1095 of file Cdd_.hpp.

Referenced by CCdd_Base::GetStyle_dictionary(), CCdd_Base::IsSetStyle_dictionary(), CCdd_Base::ResetStyle_dictionary(), and CCdd_Base::SetStyle_dictionary().

m_Subelementid

int CCdd_book_ref_Base::m_Subelementid

private

Definition at line 368 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetSubelementid(), CCdd_book_ref_Base::ResetSubelementid(), and CCdd_book_ref_Base::SetSubelementid().

m_Textelement

ETextelement CCdd_book_ref_Base::m_Textelement

private

Definition at line 366 of file Cdd_book_ref_.hpp.

Referenced by CCdd_book_ref_Base::GetTextelement(), CCdd_book_ref_Base::ResetTextelement(), and CCdd_book_ref_Base::SetTextelement().

m_Top

int CCdd_Viewer_Rect_Base::m_Top

private

Definition at line 266 of file Cdd_Viewer_Rect_.hpp.

Referenced by CCdd_Viewer_Rect_Base::GetTop(), CCdd_Viewer_Rect_Base::ResetTop(), and CCdd_Viewer_Rect_Base::SetTop().

m_Tree_scope

int CAlgorithm_type_Base::m_Tree_scope

private

Definition at line 560 of file Algorithm_type_.hpp.

Referenced by CAlgorithm_type_Base::GetTree_scope(), CAlgorithm_type_Base::ResetTree_scope(), and CAlgorithm_type_Base::SetTree_scope().

m_Trunc_master

CRef< TTrunc_master > CCdd_Base::m_Trunc_master

private

Definition at line 1083 of file Cdd_.hpp.

Referenced by CCdd_Base::GetTrunc_master(), CCdd_Base::IsSetTrunc_master(), CCdd_Base::ResetTrunc_master(), and CCdd_Base::SetTrunc_master().

m_Type [1/3]

int CAlign_annot_Base::m_Type

private

Definition at line 401 of file Align_annot_.hpp.

Referenced by CAlign_annot_Base::GetType(), CAlign_annot_Base::ResetType(), and CAlign_annot_Base::SetType().

m_Type [2/3]

int CCdd_Script_Base::m_Type

private

Definition at line 237 of file Cdd_Script_.hpp.

Referenced by CCdd_Script_Base::GetType(), CCdd_Script_Base::ResetType(), and CCdd_Script_Base::SetType().

m_Type [3/3]

int CUpdate_align_Base::m_Type

private

Definition at line 240 of file Update_align_.hpp.

Referenced by CUpdate_align_Base::GetType(), CUpdate_align_Base::ResetType(), and CUpdate_align_Base::SetType().

[1/2]

TUid { ... } ::m_Uid

Definition at line 216 of file Cdd_id_.hpp.

m_Uid [2/2]

TUid CCdd_id_Base::m_Uid

Definition at line 216 of file Cdd_id_.hpp.

Referenced by CCdd_id_Base::DoSelect(), CCdd_id_Base::GetUid(), and CCdd_id_Base::SetUid().

m_Update_date

CRef< TUpdate_date > CCdd_Project_Base::m_Update_date

private

Definition at line 493 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetUpdate_date(), CCdd_Project_Base::IsSetUpdate_date(), CCdd_Project_Base::ResetUpdate_date(), and CCdd_Project_Base::SetUpdate_date().

m_User_annotations

CRef< TUser_annotations > CCdd_Base::m_User_annotations

private

Definition at line 1096 of file Cdd_.hpp.

Referenced by CCdd_Base::GetUser_annotations(), CCdd_Base::IsSetUser_annotations(), CCdd_Base::ResetUser_annotations(), and CCdd_Base::SetUser_annotations().

m_Version

int CGlobal_id_Base::m_Version

private

Definition at line 280 of file Global_id_.hpp.

Referenced by CGlobal_id_Base::GetVersion(), CGlobal_id_Base::ResetVersion(), and CGlobal_id_Base::SetVersion().

m_Viewers

list< CRef< CCdd_Viewer > > CCdd_Project_Base::m_Viewers

private

Definition at line 487 of file Cdd_Project_.hpp.

Referenced by CCdd_Project_Base::GetViewers(), CCdd_Project_Base::ResetViewers(), and CCdd_Project_Base::SetViewers().

m_Width

int CCdd_Viewer_Rect_Base::m_Width

private

Definition at line 268 of file Cdd_Viewer_Rect_.hpp.

Referenced by CCdd_Viewer_Rect_Base::GetWidth(), CCdd_Viewer_Rect_Base::ResetWidth(), and CCdd_Viewer_Rect_Base::SetWidth().

sm_SelectionNames [1/6]

const char *const CCdd_descr_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "othername",
    "category",
    "comment",
    "reference",
    "create-date",
    "tax-source",
    "source",
    "status",
    "update-date",
    "scrapbook",
    "source-id",
    "repeats",
    "old-root",
    "curation-status",
    "readonly-status",
    "book-ref",
    "attribution",
    "title"
}

Definition at line 722 of file Cdd_descr_.hpp.

Referenced by CCdd_descr_Base::SelectionName(), and CCdd_descr_Base::ThrowInvalidSelection().

sm_SelectionNames [2/6]

const char *const CCdd_id_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "uid",
    "gid"
}

Definition at line 213 of file Cdd_id_.hpp.

Referenced by CCdd_id_Base::SelectionName(), and CCdd_id_Base::ThrowInvalidSelection().

sm_SelectionNames [3/6]

const char *const CCdd_pref_node_descr_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "create-date",
    "description"
}

Definition at line 217 of file Cdd_pref_node_descr_.hpp.

Referenced by CCdd_pref_node_descr_Base::SelectionName(), and CCdd_pref_node_descr_Base::ThrowInvalidSelection().

sm_SelectionNames [4/6]

const char *const CFeature_evidence_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "comment",
    "reference",
    "bsannot",
    "seqfeat",
    "book-ref"
}

Definition at line 304 of file Feature_evidence_.hpp.

Referenced by CFeature_evidence_Base::SelectionName(), and CFeature_evidence_Base::ThrowInvalidSelection().

sm_SelectionNames [5/6]

const char *const CSeqTree_node_Base::C_Children::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "children",
    "footprint"
}

Definition at line 351 of file SeqTree_node_.hpp.

Referenced by CSeqTree_node_Base::C_Children::SelectionName(), and CSeqTree_node_Base::C_Children::ThrowInvalidSelection().

sm_SelectionNames [6/6]

const char *const CUpdate_comment_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "comment",
    "addthis",
    "replaces",
    "reject-loc",
    "reference"
}

Definition at line 306 of file Update_comment_.hpp.

Referenced by CUpdate_comment_Base::SelectionName(), and CUpdate_comment_Base::ThrowInvalidSelection().