Collaboration diagram for Code generated by DATATOOL from 'seqres.asn' (module 'NCBI-Seqres'):

Classes
class	CByte_graph
	CByte_graph –. More...

class	CByte_graph_Base
	integer from 0-255 More...

class	CInt_graph
	CInt_graph –. More...

class	CInt_graph_Base
	CInt_graph_Base –. More...

class	CReal_graph
	CReal_graph –. More...

class	CReal_graph_Base
	CReal_graph_Base –. More...

class	CSeq_graph_Base
	* Sequence Graph ****************************** * * for values mapped by residue or range to sequence * More...

class	CSeq_graph_Base::C_Graph
	C_Graph –. More...

Typedefs
typedef CByte_graph_Base	CByte_graph::Tparent

typedef CSerialObject	CByte_graph_Base::Tparent

typedef int	CByte_graph_Base::TMax

typedef int	CByte_graph_Base::TMin

typedef int	CByte_graph_Base::TAxis

typedef vector< char >	CByte_graph_Base::TValues

typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CByte_graph_Base::TmemberIndex

typedef CInt_graph_Base	CInt_graph::Tparent

typedef CSerialObject	CInt_graph_Base::Tparent

typedef int	CInt_graph_Base::TMax

typedef int	CInt_graph_Base::TMin

typedef int	CInt_graph_Base::TAxis

typedef vector< int >	CInt_graph_Base::TValues

typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CInt_graph_Base::TmemberIndex

typedef CReal_graph_Base	CReal_graph::Tparent

typedef CSerialObject	CReal_graph_Base::Tparent

typedef double	CReal_graph_Base::TMax

typedef double	CReal_graph_Base::TMin

typedef double	CReal_graph_Base::TAxis

typedef vector< double >	CReal_graph_Base::TValues

typedef Tparent::CMemberIndex< E_memberIndex, 5 >	CReal_graph_Base::TmemberIndex

typedef CSerialObject	CSeq_graph_Base::Tparent

typedef CSerialObject	CSeq_graph_Base::C_Graph::Tparent

typedef CReal_graph	CSeq_graph_Base::C_Graph::TReal

typedef CInt_graph	CSeq_graph_Base::C_Graph::TInt

typedef CByte_graph	CSeq_graph_Base::C_Graph::TByte

typedef string	CSeq_graph_Base::TTitle

typedef string	CSeq_graph_Base::TComment

typedef CSeq_loc	CSeq_graph_Base::TLoc

typedef string	CSeq_graph_Base::TTitle_x

typedef string	CSeq_graph_Base::TTitle_y

typedef TSeqPos	CSeq_graph_Base::TComp

typedef double	CSeq_graph_Base::TA

typedef double	CSeq_graph_Base::TB

typedef TSeqPos	CSeq_graph_Base::TNumval

typedef C_Graph	CSeq_graph_Base::TGraph

typedef Tparent::CMemberIndex< E_memberIndex, 11 >	CSeq_graph_Base::TmemberIndex

Enumerations
enum class	CByte_graph_Base::E_memberIndex { CByte_graph_Base::e__allMandatory = 0 , CByte_graph_Base::e_max , CByte_graph_Base::e_min , CByte_graph_Base::e_axis , CByte_graph_Base::e_values }

enum class	CInt_graph_Base::E_memberIndex { CInt_graph_Base::e__allMandatory = 0 , CInt_graph_Base::e_max , CInt_graph_Base::e_min , CInt_graph_Base::e_axis , CInt_graph_Base::e_values }

enum class	CReal_graph_Base::E_memberIndex { CReal_graph_Base::e__allMandatory = 0 , CReal_graph_Base::e_max , CReal_graph_Base::e_min , CReal_graph_Base::e_axis , CReal_graph_Base::e_values }

enum	CSeq_graph_Base::C_Graph::E_Choice { CSeq_graph_Base::C_Graph::e_not_set = 0 , CSeq_graph_Base::C_Graph::e_Real , CSeq_graph_Base::C_Graph::e_Int , CSeq_graph_Base::C_Graph::e_Byte }
	Choice variants. More...

enum	CSeq_graph_Base::C_Graph::E_ChoiceStopper { CSeq_graph_Base::C_Graph::e_MaxChoice = 4 }
	Maximum+1 value of the choice variant enumerator. More...

enum class	CSeq_graph_Base::E_memberIndex { CSeq_graph_Base::e__allMandatory = 0 , CSeq_graph_Base::e_title , CSeq_graph_Base::e_comment , CSeq_graph_Base::e_loc , CSeq_graph_Base::e_title_x , CSeq_graph_Base::e_title_y , CSeq_graph_Base::e_comp , CSeq_graph_Base::e_a , CSeq_graph_Base::e_b , CSeq_graph_Base::e_numval , CSeq_graph_Base::e_graph }

Functions
	CByte_graph::CByte_graph (void)

	CByte_graph::~CByte_graph (void)

	CByte_graph::CByte_graph (const CByte_graph &value)

CByte_graph &	CByte_graph::operator= (const CByte_graph &value)

	CByte_graph_Base::CByte_graph_Base (void)

virtual	CByte_graph_Base::~CByte_graph_Base (void)

	CByte_graph_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CByte_graph_Base::IsSetMax (void) const
	Check if a value has been assigned to Max data member. More...

bool	CByte_graph_Base::CanGetMax (void) const
	Check if it is safe to call GetMax method. More...

void	CByte_graph_Base::ResetMax (void)
	Reset Max data member. More...

TMax	CByte_graph_Base::GetMax (void) const
	Get the Max member data. More...

void	CByte_graph_Base::SetMax (TMax value)
	Assign a value to Max data member. More...

TMax &	CByte_graph_Base::SetMax (void)
	Assign a value to Max data member. More...

bool	CByte_graph_Base::IsSetMin (void) const
	Check if a value has been assigned to Min data member. More...

bool	CByte_graph_Base::CanGetMin (void) const
	Check if it is safe to call GetMin method. More...

void	CByte_graph_Base::ResetMin (void)
	Reset Min data member. More...

TMin	CByte_graph_Base::GetMin (void) const
	Get the Min member data. More...

void	CByte_graph_Base::SetMin (TMin value)
	Assign a value to Min data member. More...

TMin &	CByte_graph_Base::SetMin (void)
	Assign a value to Min data member. More...

bool	CByte_graph_Base::IsSetAxis (void) const
	Check if a value has been assigned to Axis data member. More...

bool	CByte_graph_Base::CanGetAxis (void) const
	Check if it is safe to call GetAxis method. More...

void	CByte_graph_Base::ResetAxis (void)
	Reset Axis data member. More...

TAxis	CByte_graph_Base::GetAxis (void) const
	Get the Axis member data. More...

void	CByte_graph_Base::SetAxis (TAxis value)
	Assign a value to Axis data member. More...

TAxis &	CByte_graph_Base::SetAxis (void)
	Assign a value to Axis data member. More...

bool	CByte_graph_Base::IsSetValues (void) const
	Check if a value has been assigned to Values data member. More...

bool	CByte_graph_Base::CanGetValues (void) const
	Check if it is safe to call GetValues method. More...

void	CByte_graph_Base::ResetValues (void)
	Reset Values data member. More...

const TValues &	CByte_graph_Base::GetValues (void) const
	Get the Values member data. More...

TValues &	CByte_graph_Base::SetValues (void)
	Assign a value to Values data member. More...

virtual void	CByte_graph_Base::Reset (void)
	Reset the whole object. More...

	CByte_graph_Base::CByte_graph_Base (const CByte_graph_Base &)

CByte_graph_Base &	CByte_graph_Base::operator= (const CByte_graph_Base &)

	CInt_graph::CInt_graph (void)

	CInt_graph::~CInt_graph (void)

	CInt_graph::CInt_graph (const CInt_graph &value)

CInt_graph &	CInt_graph::operator= (const CInt_graph &value)

	CInt_graph_Base::CInt_graph_Base (void)

virtual	CInt_graph_Base::~CInt_graph_Base (void)

	CInt_graph_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CInt_graph_Base::IsSetMax (void) const
	Check if a value has been assigned to Max data member. More...

bool	CInt_graph_Base::CanGetMax (void) const
	Check if it is safe to call GetMax method. More...

void	CInt_graph_Base::ResetMax (void)
	Reset Max data member. More...

TMax	CInt_graph_Base::GetMax (void) const
	Get the Max member data. More...

void	CInt_graph_Base::SetMax (TMax value)
	Assign a value to Max data member. More...

TMax &	CInt_graph_Base::SetMax (void)
	Assign a value to Max data member. More...

bool	CInt_graph_Base::IsSetMin (void) const
	Check if a value has been assigned to Min data member. More...

bool	CInt_graph_Base::CanGetMin (void) const
	Check if it is safe to call GetMin method. More...

void	CInt_graph_Base::ResetMin (void)
	Reset Min data member. More...

TMin	CInt_graph_Base::GetMin (void) const
	Get the Min member data. More...

void	CInt_graph_Base::SetMin (TMin value)
	Assign a value to Min data member. More...

TMin &	CInt_graph_Base::SetMin (void)
	Assign a value to Min data member. More...

bool	CInt_graph_Base::IsSetAxis (void) const
	Check if a value has been assigned to Axis data member. More...

bool	CInt_graph_Base::CanGetAxis (void) const
	Check if it is safe to call GetAxis method. More...

void	CInt_graph_Base::ResetAxis (void)
	Reset Axis data member. More...

TAxis	CInt_graph_Base::GetAxis (void) const
	Get the Axis member data. More...

void	CInt_graph_Base::SetAxis (TAxis value)
	Assign a value to Axis data member. More...

TAxis &	CInt_graph_Base::SetAxis (void)
	Assign a value to Axis data member. More...

bool	CInt_graph_Base::IsSetValues (void) const
	Check if a value has been assigned to Values data member. More...

bool	CInt_graph_Base::CanGetValues (void) const
	Check if it is safe to call GetValues method. More...

void	CInt_graph_Base::ResetValues (void)
	Reset Values data member. More...

const TValues &	CInt_graph_Base::GetValues (void) const
	Get the Values member data. More...

TValues &	CInt_graph_Base::SetValues (void)
	Assign a value to Values data member. More...

virtual void	CInt_graph_Base::Reset (void)
	Reset the whole object. More...

	CInt_graph_Base::CInt_graph_Base (const CInt_graph_Base &)

CInt_graph_Base &	CInt_graph_Base::operator= (const CInt_graph_Base &)

	CReal_graph::CReal_graph (void)

	CReal_graph::~CReal_graph (void)

	CReal_graph::CReal_graph (const CReal_graph &value)

CReal_graph &	CReal_graph::operator= (const CReal_graph &value)

	CReal_graph_Base::CReal_graph_Base (void)

virtual	CReal_graph_Base::~CReal_graph_Base (void)

	CReal_graph_Base::DECLARE_INTERNAL_TYPE_INFO ()

bool	CReal_graph_Base::IsSetMax (void) const
	top of graph Check if a value has been assigned to Max data member. More...

bool	CReal_graph_Base::CanGetMax (void) const
	Check if it is safe to call GetMax method. More...

void	CReal_graph_Base::ResetMax (void)
	Reset Max data member. More...

TMax	CReal_graph_Base::GetMax (void) const
	Get the Max member data. More...

void	CReal_graph_Base::SetMax (TMax value)
	Assign a value to Max data member. More...

TMax &	CReal_graph_Base::SetMax (void)
	Assign a value to Max data member. More...

bool	CReal_graph_Base::IsSetMin (void) const
	bottom of graph Check if a value has been assigned to Min data member. More...

bool	CReal_graph_Base::CanGetMin (void) const
	Check if it is safe to call GetMin method. More...

void	CReal_graph_Base::ResetMin (void)
	Reset Min data member. More...

TMin	CReal_graph_Base::GetMin (void) const
	Get the Min member data. More...

void	CReal_graph_Base::SetMin (TMin value)
	Assign a value to Min data member. More...

TMin &	CReal_graph_Base::SetMin (void)
	Assign a value to Min data member. More...

bool	CReal_graph_Base::IsSetAxis (void) const
	value to draw axis on Check if a value has been assigned to Axis data member. More...

bool	CReal_graph_Base::CanGetAxis (void) const
	Check if it is safe to call GetAxis method. More...

void	CReal_graph_Base::ResetAxis (void)
	Reset Axis data member. More...

TAxis	CReal_graph_Base::GetAxis (void) const
	Get the Axis member data. More...

void	CReal_graph_Base::SetAxis (TAxis value)
	Assign a value to Axis data member. More...

TAxis &	CReal_graph_Base::SetAxis (void)
	Assign a value to Axis data member. More...

bool	CReal_graph_Base::IsSetValues (void) const
	Check if a value has been assigned to Values data member. More...

bool	CReal_graph_Base::CanGetValues (void) const
	Check if it is safe to call GetValues method. More...

void	CReal_graph_Base::ResetValues (void)
	Reset Values data member. More...

const TValues &	CReal_graph_Base::GetValues (void) const
	Get the Values member data. More...

TValues &	CReal_graph_Base::SetValues (void)
	Assign a value to Values data member. More...

virtual void	CReal_graph_Base::Reset (void)
	Reset the whole object. More...

	CReal_graph_Base::CReal_graph_Base (const CReal_graph_Base &)

CReal_graph_Base &	CReal_graph_Base::operator= (const CReal_graph_Base &)

	CSeq_graph_Base::CSeq_graph_Base (void)

virtual	CSeq_graph_Base::~CSeq_graph_Base (void)

	CSeq_graph_Base::DECLARE_INTERNAL_TYPE_INFO ()

	CSeq_graph_Base::C_Graph::C_Graph (void)

	CSeq_graph_Base::C_Graph::~C_Graph (void)

	CSeq_graph_Base::C_Graph::DECLARE_INTERNAL_TYPE_INFO ()

void	CSeq_graph_Base::C_Graph::Reset (void)
	Reset the whole object. More...

void	CSeq_graph_Base::C_Graph::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...

E_Choice	CSeq_graph_Base::C_Graph::Which (void) const
	Which variant is currently selected. More...

void	CSeq_graph_Base::C_Graph::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...

void	CSeq_graph_Base::C_Graph::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...

static string	CSeq_graph_Base::C_Graph::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...

void	CSeq_graph_Base::C_Graph::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...

void	CSeq_graph_Base::C_Graph::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...

bool	CSeq_graph_Base::C_Graph::IsReal (void) const
	Check if variant Real is selected. More...

const TReal &	CSeq_graph_Base::C_Graph::GetReal (void) const
	Get the variant data. More...

TReal &	CSeq_graph_Base::C_Graph::SetReal (void)
	Select the variant. More...

void	CSeq_graph_Base::C_Graph::SetReal (TReal &value)
	Select the variant and set its data. More...

bool	CSeq_graph_Base::C_Graph::IsInt (void) const
	Check if variant Int is selected. More...

const TInt &	CSeq_graph_Base::C_Graph::GetInt (void) const
	Get the variant data. More...

TInt &	CSeq_graph_Base::C_Graph::SetInt (void)
	Select the variant. More...

void	CSeq_graph_Base::C_Graph::SetInt (TInt &value)
	Select the variant and set its data. More...

bool	CSeq_graph_Base::C_Graph::IsByte (void) const
	Check if variant Byte is selected. More...

const TByte &	CSeq_graph_Base::C_Graph::GetByte (void) const
	Get the variant data. More...

TByte &	CSeq_graph_Base::C_Graph::SetByte (void)
	Select the variant. More...

void	CSeq_graph_Base::C_Graph::SetByte (TByte &value)
	Select the variant and set its data. More...

	CSeq_graph_Base::C_Graph::C_Graph (const C_Graph &)

C_Graph &	CSeq_graph_Base::C_Graph::operator= (const C_Graph &)

void	CSeq_graph_Base::C_Graph::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)

bool	CSeq_graph_Base::IsSetTitle (void) const
	Check if a value has been assigned to Title data member. More...

bool	CSeq_graph_Base::CanGetTitle (void) const
	Check if it is safe to call GetTitle method. More...

void	CSeq_graph_Base::ResetTitle (void)
	Reset Title data member. More...

const TTitle &	CSeq_graph_Base::GetTitle (void) const
	Get the Title member data. More...

void	CSeq_graph_Base::SetTitle (const TTitle &value)
	Assign a value to Title data member. More...

void	CSeq_graph_Base::SetTitle (TTitle &&value)

TTitle &	CSeq_graph_Base::SetTitle (void)
	Assign a value to Title data member. More...

bool	CSeq_graph_Base::IsSetComment (void) const
	Check if a value has been assigned to Comment data member. More...

bool	CSeq_graph_Base::CanGetComment (void) const
	Check if it is safe to call GetComment method. More...

void	CSeq_graph_Base::ResetComment (void)
	Reset Comment data member. More...

const TComment &	CSeq_graph_Base::GetComment (void) const
	Get the Comment member data. More...

void	CSeq_graph_Base::SetComment (const TComment &value)
	Assign a value to Comment data member. More...

void	CSeq_graph_Base::SetComment (TComment &&value)

TComment &	CSeq_graph_Base::SetComment (void)
	Assign a value to Comment data member. More...

bool	CSeq_graph_Base::IsSetLoc (void) const
	region this applies to Check if a value has been assigned to Loc data member. More...

bool	CSeq_graph_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...

void	CSeq_graph_Base::ResetLoc (void)
	Reset Loc data member. More...

const TLoc &	CSeq_graph_Base::GetLoc (void) const
	Get the Loc member data. More...

void	CSeq_graph_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...

TLoc &	CSeq_graph_Base::SetLoc (void)
	Assign a value to Loc data member. More...

bool	CSeq_graph_Base::IsSetTitle_x (void) const
	title for x-axis Check if a value has been assigned to Title_x data member. More...

bool	CSeq_graph_Base::CanGetTitle_x (void) const
	Check if it is safe to call GetTitle_x method. More...

void	CSeq_graph_Base::ResetTitle_x (void)
	Reset Title_x data member. More...

const TTitle_x &	CSeq_graph_Base::GetTitle_x (void) const
	Get the Title_x member data. More...

void	CSeq_graph_Base::SetTitle_x (const TTitle_x &value)
	Assign a value to Title_x data member. More...

void	CSeq_graph_Base::SetTitle_x (TTitle_x &&value)

TTitle_x &	CSeq_graph_Base::SetTitle_x (void)
	Assign a value to Title_x data member. More...

bool	CSeq_graph_Base::IsSetTitle_y (void) const
	Check if a value has been assigned to Title_y data member. More...

bool	CSeq_graph_Base::CanGetTitle_y (void) const
	Check if it is safe to call GetTitle_y method. More...

void	CSeq_graph_Base::ResetTitle_y (void)
	Reset Title_y data member. More...

const TTitle_y &	CSeq_graph_Base::GetTitle_y (void) const
	Get the Title_y member data. More...

void	CSeq_graph_Base::SetTitle_y (const TTitle_y &value)
	Assign a value to Title_y data member. More...

void	CSeq_graph_Base::SetTitle_y (TTitle_y &&value)

TTitle_y &	CSeq_graph_Base::SetTitle_y (void)
	Assign a value to Title_y data member. More...

bool	CSeq_graph_Base::IsSetComp (void) const
	compression (residues/value) Check if a value has been assigned to Comp data member. More...

bool	CSeq_graph_Base::CanGetComp (void) const
	Check if it is safe to call GetComp method. More...

void	CSeq_graph_Base::ResetComp (void)
	Reset Comp data member. More...

TComp	CSeq_graph_Base::GetComp (void) const
	Get the Comp member data. More...

void	CSeq_graph_Base::SetComp (TComp value)
	Assign a value to Comp data member. More...

TComp &	CSeq_graph_Base::SetComp (void)
	Assign a value to Comp data member. More...

bool	CSeq_graph_Base::IsSetA (void) const
	for scaling values Check if a value has been assigned to A data member. More...

bool	CSeq_graph_Base::CanGetA (void) const
	Check if it is safe to call GetA method. More...

void	CSeq_graph_Base::ResetA (void)
	Reset A data member. More...

TA	CSeq_graph_Base::GetA (void) const
	Get the A member data. More...

void	CSeq_graph_Base::SetA (TA value)
	Assign a value to A data member. More...

TA &	CSeq_graph_Base::SetA (void)
	Assign a value to A data member. More...

bool	CSeq_graph_Base::IsSetB (void) const
	display = (a x value) + b Check if a value has been assigned to B data member. More...

bool	CSeq_graph_Base::CanGetB (void) const
	Check if it is safe to call GetB method. More...

void	CSeq_graph_Base::ResetB (void)
	Reset B data member. More...

TB	CSeq_graph_Base::GetB (void) const
	Get the B member data. More...

void	CSeq_graph_Base::SetB (TB value)
	Assign a value to B data member. More...

TB &	CSeq_graph_Base::SetB (void)
	Assign a value to B data member. More...

bool	CSeq_graph_Base::IsSetNumval (void) const
	number of values in graph Check if a value has been assigned to Numval data member. More...

bool	CSeq_graph_Base::CanGetNumval (void) const
	Check if it is safe to call GetNumval method. More...

void	CSeq_graph_Base::ResetNumval (void)
	Reset Numval data member. More...

TNumval	CSeq_graph_Base::GetNumval (void) const
	Get the Numval member data. More...

void	CSeq_graph_Base::SetNumval (TNumval value)
	Assign a value to Numval data member. More...

TNumval &	CSeq_graph_Base::SetNumval (void)
	Assign a value to Numval data member. More...

bool	CSeq_graph_Base::IsSetGraph (void) const
	Check if a value has been assigned to Graph data member. More...

bool	CSeq_graph_Base::CanGetGraph (void) const
	Check if it is safe to call GetGraph method. More...

void	CSeq_graph_Base::ResetGraph (void)
	Reset Graph data member. More...

const TGraph &	CSeq_graph_Base::GetGraph (void) const
	Get the Graph member data. More...

void	CSeq_graph_Base::SetGraph (TGraph &value)
	Assign a value to Graph data member. More...

TGraph &	CSeq_graph_Base::SetGraph (void)
	Assign a value to Graph data member. More...

virtual void	CSeq_graph_Base::Reset (void)
	Reset the whole object. More...

	CSeq_graph_Base::CSeq_graph_Base (const CSeq_graph_Base &)

CSeq_graph_Base &	CSeq_graph_Base::operator= (const CSeq_graph_Base &)

Variables
Uint4	CByte_graph_Base::m_set_State [1]

int	CByte_graph_Base::m_Max

int	CByte_graph_Base::m_Min

int	CByte_graph_Base::m_Axis

vector< char >	CByte_graph_Base::m_Values

Uint4	CInt_graph_Base::m_set_State [1]

int	CInt_graph_Base::m_Max

int	CInt_graph_Base::m_Min

int	CInt_graph_Base::m_Axis

vector< int >	CInt_graph_Base::m_Values

Uint4	CReal_graph_Base::m_set_State [1]

double	CReal_graph_Base::m_Max

double	CReal_graph_Base::m_Min

double	CReal_graph_Base::m_Axis

vector< double >	CReal_graph_Base::m_Values

E_Choice	CSeq_graph_Base::C_Graph::m_choice

static const char *const	CSeq_graph_Base::C_Graph::sm_SelectionNames []

NCBI_NS_NCBI::CSerialObject *	CSeq_graph_Base::C_Graph::m_object

Uint4	CSeq_graph_Base::m_set_State [1]

string	CSeq_graph_Base::m_Title

string	CSeq_graph_Base::m_Comment

CRef< TLoc >	CSeq_graph_Base::m_Loc

string	CSeq_graph_Base::m_Title_x

string	CSeq_graph_Base::m_Title_y

TSeqPos	CSeq_graph_Base::m_Comp

double	CSeq_graph_Base::m_A

double	CSeq_graph_Base::m_B

TSeqPos	CSeq_graph_Base::m_Numval

CRef< TGraph >	CSeq_graph_Base::m_Graph

Detailed Description

Typedef Documentation

◆ TA

typedef double CSeq_graph_Base::TA

Definition at line 279 of file Seq_graph_.hpp.

◆ TAxis [1/3]

typedef int CByte_graph_Base::TAxis

Definition at line 88 of file Byte_graph_.hpp.

◆ TAxis [2/3]

typedef int CInt_graph_Base::TAxis

Definition at line 87 of file Int_graph_.hpp.

◆ TAxis [3/3]

typedef double CReal_graph_Base::TAxis

Definition at line 87 of file Real_graph_.hpp.

◆ TB

typedef double CSeq_graph_Base::TB

Definition at line 280 of file Seq_graph_.hpp.

◆ TByte

typedef CByte_graph CSeq_graph_Base::C_Graph::TByte

Definition at line 175 of file Seq_graph_.hpp.

◆ TComment

typedef string CSeq_graph_Base::TComment

Definition at line 274 of file Seq_graph_.hpp.

◆ TComp

typedef TSeqPos CSeq_graph_Base::TComp

Definition at line 278 of file Seq_graph_.hpp.

◆ TGraph

typedef C_Graph CSeq_graph_Base::TGraph

Definition at line 282 of file Seq_graph_.hpp.

◆ TInt

typedef CInt_graph CSeq_graph_Base::C_Graph::TInt

Definition at line 174 of file Seq_graph_.hpp.

◆ TLoc

typedef CSeq_loc CSeq_graph_Base::TLoc

Definition at line 275 of file Seq_graph_.hpp.

◆ TMax [1/3]

typedef int CByte_graph_Base::TMax

Definition at line 86 of file Byte_graph_.hpp.

◆ TMax [2/3]

typedef int CInt_graph_Base::TMax

Definition at line 85 of file Int_graph_.hpp.

◆ TMax [3/3]

typedef double CReal_graph_Base::TMax

Definition at line 85 of file Real_graph_.hpp.

◆ TmemberIndex [1/4]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CByte_graph_Base::TmemberIndex

Definition at line 99 of file Byte_graph_.hpp.

◆ TmemberIndex [2/4]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CInt_graph_Base::TmemberIndex

Definition at line 98 of file Int_graph_.hpp.

◆ TmemberIndex [3/4]

typedef Tparent::CMemberIndex<E_memberIndex, 5> CReal_graph_Base::TmemberIndex

Definition at line 98 of file Real_graph_.hpp.

◆ TmemberIndex [4/4]

typedef Tparent::CMemberIndex<E_memberIndex, 11> CSeq_graph_Base::TmemberIndex

Definition at line 298 of file Seq_graph_.hpp.

◆ TMin [1/3]

typedef int CByte_graph_Base::TMin

Definition at line 87 of file Byte_graph_.hpp.

◆ TMin [2/3]

typedef int CInt_graph_Base::TMin

Definition at line 86 of file Int_graph_.hpp.

◆ TMin [3/3]

typedef double CReal_graph_Base::TMin

Definition at line 86 of file Real_graph_.hpp.

◆ TNumval

typedef TSeqPos CSeq_graph_Base::TNumval

Definition at line 281 of file Seq_graph_.hpp.

◆ Tparent [1/8]

typedef CByte_graph_Base CByte_graph::Tparent

private

Definition at line 67 of file Byte_graph.hpp.

◆ Tparent [2/8]

typedef CSerialObject CByte_graph_Base::Tparent

private

Definition at line 75 of file Byte_graph_.hpp.

◆ Tparent [3/8]

typedef CInt_graph_Base CInt_graph::Tparent

private

Definition at line 67 of file Int_graph.hpp.

◆ Tparent [4/8]

typedef CSerialObject CInt_graph_Base::Tparent

private

Definition at line 74 of file Int_graph_.hpp.

◆ Tparent [5/8]

typedef CReal_graph_Base CReal_graph::Tparent

private

Definition at line 67 of file Real_graph.hpp.

◆ Tparent [6/8]

typedef CSerialObject CReal_graph_Base::Tparent

private

Definition at line 74 of file Real_graph_.hpp.

◆ Tparent [7/8]

typedef CSerialObject CSeq_graph_Base::Tparent

private

Definition at line 85 of file Seq_graph_.hpp.

◆ Tparent [8/8]

typedef CSerialObject CSeq_graph_Base::C_Graph::Tparent

private

Definition at line 102 of file Seq_graph_.hpp.

◆ TReal

typedef CReal_graph CSeq_graph_Base::C_Graph::TReal

Definition at line 173 of file Seq_graph_.hpp.

◆ TTitle

typedef string CSeq_graph_Base::TTitle

Definition at line 273 of file Seq_graph_.hpp.

◆ TTitle_x

typedef string CSeq_graph_Base::TTitle_x

Definition at line 276 of file Seq_graph_.hpp.

◆ TTitle_y

typedef string CSeq_graph_Base::TTitle_y

Definition at line 277 of file Seq_graph_.hpp.

◆ TValues [1/3]

typedef vector< char > CByte_graph_Base::TValues

Definition at line 89 of file Byte_graph_.hpp.

◆ TValues [2/3]

typedef vector< int > CInt_graph_Base::TValues

Definition at line 88 of file Int_graph_.hpp.

◆ TValues [3/3]

typedef vector< double > CReal_graph_Base::TValues

Definition at line 88 of file Real_graph_.hpp.

Enumeration Type Documentation

◆ E_Choice

enum CSeq_graph_Base::C_Graph::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Real
e_Int
e_Byte

Definition at line 114 of file Seq_graph_.hpp.

◆ E_ChoiceStopper

enum CSeq_graph_Base::C_Graph::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Byte+1

Definition at line 121 of file Seq_graph_.hpp.

◆ E_memberIndex [1/4]

enum CByte_graph_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_max
e_min
e_axis
e_values

Definition at line 92 of file Byte_graph_.hpp.

◆ E_memberIndex [2/4]

enum CInt_graph_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_max
e_min
e_axis
e_values

Definition at line 91 of file Int_graph_.hpp.

◆ E_memberIndex [3/4]

enum CReal_graph_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_max
e_min
e_axis
e_values

Definition at line 91 of file Real_graph_.hpp.

◆ E_memberIndex [4/4]

enum CSeq_graph_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_title
e_comment
e_loc
e_title_x
e_title_y
e_comp
e_a
e_b
e_numval
e_graph

Definition at line 285 of file Seq_graph_.hpp.

Function Documentation

◆ C_Graph() [1/2]

CSeq_graph_Base::C_Graph::C_Graph ( const C_Graph & )

private

◆ C_Graph() [2/2]

END_CHOICE_INFO CSeq_graph_Base::C_Graph::C_Graph ( void )

Definition at line 191 of file Seq_graph_.cpp.

◆ CanGetA()

bool CSeq_graph_Base::CanGetA ( void ) const

inline

Check if it is safe to call GetA method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 1034 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetA().

Referenced by CSeq_graph_Base::GetA(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ CanGetAxis() [1/3]

bool CByte_graph_Base::CanGetAxis ( void ) const

inline

Check if it is safe to call GetAxis method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 373 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetAxis().

Referenced by CByte_graph_Base::GetAxis().

◆ CanGetAxis() [2/3]

bool CInt_graph_Base::CanGetAxis ( void ) const

inline

Check if it is safe to call GetAxis method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 372 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetAxis().

Referenced by CInt_graph_Base::GetAxis().

◆ CanGetAxis() [3/3]

bool CReal_graph_Base::CanGetAxis ( void ) const

inline

Check if it is safe to call GetAxis method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 375 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetAxis().

Referenced by CReal_graph_Base::GetAxis().

◆ CanGetB()

bool CSeq_graph_Base::CanGetB ( void ) const

inline

Check if it is safe to call GetB method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 1081 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetB().

Referenced by CSeq_graph_Base::GetB(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ CanGetComment()

bool CSeq_graph_Base::CanGetComment ( void ) const

inline

Check if it is safe to call GetComment method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 816 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetComment().

Referenced by CSeq_graph_Base::GetComment().

◆ CanGetComp()

bool CSeq_graph_Base::CanGetComp ( void ) const

inline

Check if it is safe to call GetComp method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 987 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetComp().

Referenced by CSeq_graph_Base::GetComp(), and CWiggleWriter::xWriteSingleGraphFixedStep().

◆ CanGetGraph()

bool CSeq_graph_Base::CanGetGraph ( void ) const

inline

Check if it is safe to call GetGraph method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 1175 of file Seq_graph_.hpp.

Referenced by CWiggleWriter::xContainsDataByte(), CWiggleWriter::xContainsDataInt(), CWiggleWriter::xContainsDataReal(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ CanGetLoc()

bool CSeq_graph_Base::CanGetLoc ( void ) const

inline

Check if it is safe to call GetLoc method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 863 of file Seq_graph_.hpp.

Referenced by CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), s_UpdateSeqGraphLoc(), CVectorTrimPanel::x_UpdateSeqGraphLoc(), CReportTrim::x_UpdateSeqGraphLoc(), and CWiggleWriter::xWriteSingleGraphFixedStep().

◆ CanGetMax() [1/3]

bool CByte_graph_Base::CanGetMax ( void ) const

inline

Check if it is safe to call GetMax method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 279 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetMax().

Referenced by CByte_graph_Base::GetMax().

◆ CanGetMax() [2/3]

bool CInt_graph_Base::CanGetMax ( void ) const

inline

Check if it is safe to call GetMax method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 278 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetMax().

Referenced by CInt_graph_Base::GetMax().

◆ CanGetMax() [3/3]

bool CReal_graph_Base::CanGetMax ( void ) const

inline

Check if it is safe to call GetMax method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 281 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetMax().

Referenced by CReal_graph_Base::GetMax().

◆ CanGetMin() [1/3]

bool CByte_graph_Base::CanGetMin ( void ) const

inline

Check if it is safe to call GetMin method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 326 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetMin().

Referenced by CByte_graph_Base::GetMin().

◆ CanGetMin() [2/3]

bool CInt_graph_Base::CanGetMin ( void ) const

inline

Check if it is safe to call GetMin method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 325 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetMin().

Referenced by CInt_graph_Base::GetMin().

◆ CanGetMin() [3/3]

bool CReal_graph_Base::CanGetMin ( void ) const

inline

Check if it is safe to call GetMin method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 328 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetMin().

Referenced by CReal_graph_Base::GetMin().

◆ CanGetNumval()

bool CSeq_graph_Base::CanGetNumval ( void ) const

inline

Check if it is safe to call GetNumval method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 1128 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetNumval().

Referenced by CSeq_graph_Base::GetNumval(), CWiggleWriter::xContainsDataByte(), CWiggleWriter::xContainsDataInt(), CWiggleWriter::xContainsDataReal(), CWiggleWriter::xWriteSingleGraph(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ CanGetTitle()

bool CSeq_graph_Base::CanGetTitle ( void ) const

inline

Check if it is safe to call GetTitle method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 769 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle().

Referenced by CSeq_graph_Base::GetTitle(), CTraceDataProxy::LoadData(), and CSGTraceGraphDS::LoadData().

◆ CanGetTitle_x()

bool CSeq_graph_Base::CanGetTitle_x ( void ) const

inline

Check if it is safe to call GetTitle_x method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 893 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle_x().

Referenced by CSeq_graph_Base::GetTitle_x().

◆ CanGetTitle_y()

bool CSeq_graph_Base::CanGetTitle_y ( void ) const

inline

Check if it is safe to call GetTitle_y method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 940 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle_y().

Referenced by CSeq_graph_Base::GetTitle_y().

◆ CanGetValues() [1/3]

bool CByte_graph_Base::CanGetValues ( void ) const

inline

Check if it is safe to call GetValues method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 420 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetValues().

Referenced by CByte_graph_Base::GetValues(), CWiggleWriter::xContainsDataByte(), and CWiggleWriter::xWriteSingleGraphRecordsByte().

◆ CanGetValues() [2/3]

bool CInt_graph_Base::CanGetValues ( void ) const

inline

Check if it is safe to call GetValues method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 419 of file Int_graph_.hpp.

Referenced by CWiggleWriter::xContainsDataInt(), and CWiggleWriter::xWriteSingleGraphRecordsInt().

◆ CanGetValues() [3/3]

bool CReal_graph_Base::CanGetValues ( void ) const

inline

Check if it is safe to call GetValues method.

Returns

true, if the data member is getatable.
false, otherwise.

Definition at line 422 of file Real_graph_.hpp.

Referenced by CWiggleWriter::xContainsDataReal(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ CByte_graph() [1/2]

CByte_graph::CByte_graph ( const CByte_graph & value )

private

◆ CByte_graph() [2/2]

CByte_graph::CByte_graph ( void )

inline

Definition at line 86 of file Byte_graph.hpp.

◆ CByte_graph_Base() [1/2]

CByte_graph_Base::CByte_graph_Base ( const CByte_graph_Base & )

private

◆ CByte_graph_Base() [2/2]

END_CLASS_INFO CByte_graph_Base::CByte_graph_Base ( void )

Definition at line 78 of file Byte_graph_.cpp.

References CByte_graph_Base::m_set_State.

◆ CheckSelected()

void CSeq_graph_Base::C_Graph::CheckSelected ( E_Choice index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index Expected selection.

Definition at line 722 of file Seq_graph_.hpp.

◆ CInt_graph() [1/2]

CInt_graph::CInt_graph ( const CInt_graph & value )

private

◆ CInt_graph() [2/2]

CInt_graph::CInt_graph ( void )

inline

Definition at line 86 of file Int_graph.hpp.

◆ CInt_graph_Base() [1/2]

CInt_graph_Base::CInt_graph_Base ( const CInt_graph_Base & )

private

◆ CInt_graph_Base() [2/2]

END_CLASS_INFO CInt_graph_Base::CInt_graph_Base ( void )

Definition at line 78 of file Int_graph_.cpp.

References CInt_graph_Base::m_set_State.

◆ CReal_graph() [1/2]

CReal_graph::CReal_graph ( const CReal_graph & value )

private

◆ CReal_graph() [2/2]

CReal_graph::CReal_graph ( void )

inline

Definition at line 86 of file Real_graph.hpp.

◆ CReal_graph_Base() [1/2]

CReal_graph_Base::CReal_graph_Base ( const CReal_graph_Base & )

private

◆ CReal_graph_Base() [2/2]

END_CLASS_INFO CReal_graph_Base::CReal_graph_Base ( void )

Definition at line 78 of file Real_graph_.cpp.

References CReal_graph_Base::m_set_State.

◆ CSeq_graph_Base() [1/2]

CSeq_graph_Base::CSeq_graph_Base ( const CSeq_graph_Base & )

private

◆ CSeq_graph_Base() [2/2]

END_CLASS_INFO CSeq_graph_Base::CSeq_graph_Base ( void )

Definition at line 289 of file Seq_graph_.cpp.

References CObject::IsAllocatedInPool(), CSeq_graph_Base::m_set_State, CSeq_graph_Base::ResetGraph(), and CSeq_graph_Base::ResetLoc().

◆ DECLARE_INTERNAL_TYPE_INFO() [1/5]

CByte_graph_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [2/5]

CInt_graph_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [3/5]

CReal_graph_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [4/5]

CSeq_graph_Base::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DECLARE_INTERNAL_TYPE_INFO() [5/5]

CSeq_graph_Base::C_Graph::DECLARE_INTERNAL_TYPE_INFO ( )

◆ DoSelect()

void CSeq_graph_Base::C_Graph::DoSelect	(	E_Choice	index,
		CObjectMemoryPool *	pool = `0`
	)

private

Definition at line 74 of file Seq_graph_.cpp.

References CObject::AddReference().

◆ GetA()

CSeq_graph_Base::TA CSeq_graph_Base::GetA ( void ) const

inline

Get the A member data.

Returns: Copy of the member data.

Definition at line 1047 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetA(), CSeq_graph_Base::m_A, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetA(), CSeq_graph_Handle::GetA(), CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), s_AddGraphToMap(), s_Fingerprint_Seq_graph(), CBamRefSeqInfo::x_LoadRangesCov(), CBedGraphWriter::xWriteSingleGraphByte(), CBedGraphWriter::xWriteSingleGraphInt(), CBedGraphWriter::xWriteSingleGraphReal(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ GetAxis() [1/3]

CByte_graph_Base::TAxis CByte_graph_Base::GetAxis ( void ) const

inline

Get the Axis member data.

Returns: Copy of the member data.

Definition at line 386 of file Byte_graph_.hpp.

References CByte_graph_Base::CanGetAxis(), CByte_graph_Base::m_Axis, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CVectorTrimPanel::x_TrimSeqGraphData(), and CReportTrim::x_TrimSeqGraphData().

◆ GetAxis() [2/3]

CInt_graph_Base::TAxis CInt_graph_Base::GetAxis ( void ) const

inline

Get the Axis member data.

Returns: Copy of the member data.

Definition at line 385 of file Int_graph_.hpp.

References CInt_graph_Base::CanGetAxis(), CInt_graph_Base::m_Axis, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), and CSeq_loc_Mapper_Base::Map().

◆ GetAxis() [3/3]

CReal_graph_Base::TAxis CReal_graph_Base::GetAxis ( void ) const

inline

Get the Axis member data.

Returns: Copy of the member data.

Definition at line 388 of file Real_graph_.hpp.

References CReal_graph_Base::CanGetAxis(), CReal_graph_Base::m_Axis, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and s_Fingerprint_Real_graph().

◆ GetB()

CSeq_graph_Base::TB CSeq_graph_Base::GetB ( void ) const

inline

Get the B member data.

Returns: Copy of the member data.

Definition at line 1094 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetB(), CSeq_graph_Base::m_B, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetB(), CSeq_graph_Handle::GetB(), s_AddGraphToMap(), s_Fingerprint_Seq_graph(), CBamRefSeqInfo::x_LoadRangesCov(), CBedGraphWriter::xWriteSingleGraphByte(), CBedGraphWriter::xWriteSingleGraphInt(), CBedGraphWriter::xWriteSingleGraphReal(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ GetByte()

const CSeq_graph_Base::C_Graph::TByte & CSeq_graph_Base::C_Graph::GetByte ( void ) const

Get the variant data.

Returns: Reference to the data.

Definition at line 153 of file Seq_graph_.cpp.

Referenced by SGraphMaker::AddActualValues(), NSnpAnnot::EstimateSNPCount(), CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CDemoApp::Run(), s_Fingerprint_Seq_graph(), Split_Qscore_SeqGraph_By_DeltaSeq(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CValidError_graph::ValidateSeqGraph(), CValidError_graph::ValidateSeqGraphContext(), CSGAnnotJob::x_AddGraphObject(), CSGAlignStatJob::x_CollectAlignStats(), CSnpJob::x_FetchGraphs(), CBamRefSeqInfo::x_LoadRangesCov(), CSGAlnQualityScore::x_RetrieveQualityMap(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), CValidError_graph::x_ValidateGraphValues(), CWiggleWriter::xContainsDataByte(), CBedGraphWriter::xWriteSingleGraphByte(), and CWiggleWriter::xWriteSingleGraphRecordsByte().

◆ GetComment()

const CSeq_graph_Base::TComment & CSeq_graph_Base::GetComment ( void ) const

inline

Get the Comment member data.

Returns: Reference to the member data.

Definition at line 822 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetComment(), CSeq_graph_Base::m_Comment, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetComment(), CSeq_graph_Handle::GetComment(), and s_Fingerprint_Seq_graph().

◆ GetComp()

CSeq_graph_Base::TComp CSeq_graph_Base::GetComp ( void ) const

inline

Get the Comp member data.

Returns: Copy of the member data.

Definition at line 1000 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetComp(), CSeq_graph_Base::m_Comp, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetComp(), CSeq_graph_Handle::GetComp(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_AddGraphToMap(), sx_AddBits(), CAlignmentAssistant::TrimQualityScores(), CBamRefSeqInfo::x_LoadRangesCov(), CBedGraphWriter::xWriteSingleGraphByte(), CWiggleWriter::xWriteSingleGraphFixedStep(), CBedGraphWriter::xWriteSingleGraphInt(), and CBedGraphWriter::xWriteSingleGraphReal().

◆ GetGraph()

const CSeq_graph_Base::TGraph & CSeq_graph_Base::GetGraph ( void ) const

inline

Get the Graph member data.

Returns: Reference to the member data.

Definition at line 1181 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Graph, and CSeq_graph_Base::ResetGraph().

Referenced by SGraphMaker::AddActualValues(), CMappedGraph::GetGraph(), CSeq_graph_Handle::GetGraph(), CValidError_graph::IsSupportedGraphType(), CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CDemoApp::Run(), s_Fingerprint_Seq_graph(), Split_Qscore_SeqGraph_By_DeltaSeq(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CValidError_graph::ValidateSeqGraph(), CValidError_graph::ValidateSeqGraphContext(), CQualScoreWriter::Write(), CBamRefSeqInfo::x_LoadRangesCov(), CSGAlnQualityScore::x_RetrieveQualityMap(), CValidError_graph::x_ValidateGraphValues(), CQualScoreWriter::x_WriteHeader(), CWiggleWriter::xContainsDataByte(), CWiggleWriter::xContainsDataInt(), CWiggleWriter::xContainsDataReal(), CBedGraphWriter::xWriteSingleGraph(), CBedGraphWriter::xWriteSingleGraphByte(), CBedGraphWriter::xWriteSingleGraphInt(), CBedGraphWriter::xWriteSingleGraphReal(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ GetInt()

const CSeq_graph_Base::C_Graph::TInt & CSeq_graph_Base::C_Graph::GetInt ( void ) const

Get the variant data.

Returns: Reference to the data.

Definition at line 131 of file Seq_graph_.cpp.

Referenced by NSnpAnnot::EstimateSNPCount(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CDemoApp::Run(), s_Fingerprint_Seq_graph(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CSGAnnotJob::x_AddGraphObject(), CSGAlignStatJob::x_CollectAlignStats(), CSnpJob::x_FetchGraphs(), CBamRefSeqInfo::x_LoadRangesCov(), CSGAlnQualityScore::x_RetrieveQualityMap(), CWiggleWriter::xContainsDataInt(), CBedGraphWriter::xWriteSingleGraphInt(), and CWiggleWriter::xWriteSingleGraphRecordsInt().

◆ GetLoc()

const CSeq_graph_Base::TLoc & CSeq_graph_Base::GetLoc ( void ) const

inline

Get the Loc member data.

Returns: Reference to the member data.

Definition at line 869 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Loc, and CSeq_graph_Base::ResetLoc().

Referenced by CSeqsRange::Add(), CSeq_loc_Conversion_Set::Convert(), CSeq_loc_Conversion::Convert(), GetAccessionFromObjects(), CDesktopGraphItem::GetDescription(), CSeq_graph_Handle::GetLoc(), CSeq_loc_Mapper_Base::Map(), CValidError_imp::PostErr(), CDemoApp::Run(), s_AddGraphToMap(), s_CompareTwoSeqGraphs(), s_Fingerprint_Seq_graph(), s_UpdateSeqGraphLoc(), CLDS2_AnnotType_Hook::SkipObject(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CValidError_graph::ValidateGraphsOnBioseq(), CValidError_graph::ValidateSeqGraphContext(), CAnnotObject_Info::x_ProcessGraph(), CSplitDataLoader::x_SplitGraphs(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), CVectorTrimPanel::x_UpdateSeqGraphLoc(), CReportTrim::x_UpdateSeqGraphLoc(), CValidError_graph::x_ValidateGraphLocation(), CValidError_graph::x_ValidateGraphOnDeltaBioseq(), CValidError_graph::x_ValidateGraphValues(), CBedGraphWriter::xWriteSingleGraphByte(), CWiggleWriter::xWriteSingleGraphFixedStep(), CBedGraphWriter::xWriteSingleGraphInt(), and CBedGraphWriter::xWriteSingleGraphReal().

◆ GetMax() [1/3]

CByte_graph_Base::TMax CByte_graph_Base::GetMax ( void ) const

inline

Get the Max member data.

Returns: Copy of the member data.

Definition at line 292 of file Byte_graph_.hpp.

References CByte_graph_Base::CanGetMax(), CByte_graph_Base::m_Max, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), CValidError_graph::x_ValidateGraphValues(), and CValidError_graph::x_ValidateMaxValues().

◆ GetMax() [2/3]

CInt_graph_Base::TMax CInt_graph_Base::GetMax ( void ) const

inline

Get the Max member data.

Returns: Copy of the member data.

Definition at line 291 of file Int_graph_.hpp.

References CInt_graph_Base::CanGetMax(), CInt_graph_Base::m_Max, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), and CSeq_loc_Mapper_Base::Map().

◆ GetMax() [3/3]

CReal_graph_Base::TMax CReal_graph_Base::GetMax ( void ) const

inline

Get the Max member data.

Returns: Copy of the member data.

Definition at line 294 of file Real_graph_.hpp.

References CReal_graph_Base::CanGetMax(), CReal_graph_Base::m_Max, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and s_Fingerprint_Real_graph().

◆ GetMin() [1/3]

CByte_graph_Base::TMin CByte_graph_Base::GetMin ( void ) const

inline

Get the Min member data.

Returns: Copy of the member data.

Definition at line 339 of file Byte_graph_.hpp.

References CByte_graph_Base::CanGetMin(), CByte_graph_Base::m_Min, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), CValidError_graph::x_ValidateGraphValues(), and CValidError_graph::x_ValidateMinValues().

◆ GetMin() [2/3]

CInt_graph_Base::TMin CInt_graph_Base::GetMin ( void ) const

inline

Get the Min member data.

Returns: Copy of the member data.

Definition at line 338 of file Int_graph_.hpp.

References CInt_graph_Base::CanGetMin(), CInt_graph_Base::m_Min, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), and CSeq_loc_Mapper_Base::Map().

◆ GetMin() [3/3]

CReal_graph_Base::TMin CReal_graph_Base::GetMin ( void ) const

inline

Get the Min member data.

Returns: Copy of the member data.

Definition at line 341 of file Real_graph_.hpp.

References CReal_graph_Base::CanGetMin(), CReal_graph_Base::m_Min, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and s_Fingerprint_Real_graph().

◆ GetNumval()

CSeq_graph_Base::TNumval CSeq_graph_Base::GetNumval ( void ) const

inline

Get the Numval member data.

Returns: Copy of the member data.

Definition at line 1141 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetNumval(), CSeq_graph_Base::m_Numval, and CSerialObject::ThrowUnassigned().

Referenced by BOOST_AUTO_TEST_CASE(), CMappedGraph::GetNumval(), CSeq_graph_Handle::GetNumval(), CDemoApp::Run(), sx_AddBits(), CValidError_graph::ValidateGraphsOnBioseq(), CValidError_graph::ValidateSeqGraphContext(), CBamRefSeqInfo::x_LoadRangesCov(), CValidError_graph::x_ValidateGraphOnDeltaBioseq(), CValidError_graph::x_ValidateGraphValues(), CWiggleWriter::xContainsDataByte(), CWiggleWriter::xContainsDataInt(), CWiggleWriter::xContainsDataReal(), CWiggleWriter::xWriteSingleGraph(), CBedGraphWriter::xWriteSingleGraphByte(), CBedGraphWriter::xWriteSingleGraphInt(), CBedGraphWriter::xWriteSingleGraphReal(), CWiggleWriter::xWriteSingleGraphRecordsByte(), CWiggleWriter::xWriteSingleGraphRecordsInt(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ GetReal()

const CSeq_graph_Base::C_Graph::TReal & CSeq_graph_Base::C_Graph::GetReal ( void ) const

Get the variant data.

Returns: Reference to the data.

Definition at line 109 of file Seq_graph_.cpp.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_Fingerprint_Seq_graph(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CSGAnnotJob::x_AddGraphObject(), CSGAlnQualityScore::x_RetrieveQualityMap(), CWiggleWriter::xContainsDataReal(), CBedGraphWriter::xWriteSingleGraphReal(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ GetTitle()

const CSeq_graph_Base::TTitle & CSeq_graph_Base::GetTitle ( void ) const

inline

Get the Title member data.

Returns: Reference to the member data.

Definition at line 775 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetTitle(), CSeq_graph_Base::m_Title, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetTitle(), CSeq_graph_Handle::GetTitle(), CValidError_graph::IsSupportedGraphType(), CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), CValidError_imp::PostErr(), CDemoApp::Run(), s_Fingerprint_Seq_graph(), and Split_Qscore_SeqGraph_By_DeltaSeq().

◆ GetTitle_x()

const CSeq_graph_Base::TTitle_x & CSeq_graph_Base::GetTitle_x ( void ) const

inline

Get the Title_x member data.

Returns: Reference to the member data.

Definition at line 899 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetTitle_x(), CSeq_graph_Base::m_Title_x, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetTitle_x(), CSeq_graph_Handle::GetTitle_x(), and s_Fingerprint_Seq_graph().

◆ GetTitle_y()

const CSeq_graph_Base::TTitle_y & CSeq_graph_Base::GetTitle_y ( void ) const

inline

Get the Title_y member data.

Returns: Reference to the member data.

Definition at line 946 of file Seq_graph_.hpp.

References CSeq_graph_Base::CanGetTitle_y(), CSeq_graph_Base::m_Title_y, and CSerialObject::ThrowUnassigned().

Referenced by CMappedGraph::GetTitle_y(), CSeq_graph_Handle::GetTitle_y(), and s_Fingerprint_Seq_graph().

◆ GetValues() [1/3]

const CByte_graph_Base::TValues & CByte_graph_Base::GetValues ( void ) const

inline

Get the Values member data.

Returns: Reference to the member data.

Definition at line 426 of file Byte_graph_.hpp.

References CByte_graph_Base::CanGetValues(), CByte_graph_Base::m_Values, and CSerialObject::ThrowUnassigned().

Referenced by NSnpAnnot::EstimateSNPCount(), CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_Fingerprint_Byte_graph(), Split_Qscore_SeqGraph_By_DeltaSeq(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CValidError_graph::ValidateSeqGraphContext(), CQualScoreWriter::Write(), CSGAlignStatJob::x_CollectAlignStats(), CSnpJob::x_FetchGraphs(), CSGAlnQualityScore::x_RetrieveQualityMap(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), CValidError_graph::x_ValidateGraphValues(), CQualScoreWriter::x_WriteHeader(), CWiggleWriter::xContainsDataByte(), CBedGraphWriter::xWriteSingleGraphByte(), and CWiggleWriter::xWriteSingleGraphRecordsByte().

◆ GetValues() [2/3]

const CInt_graph_Base::TValues & CInt_graph_Base::GetValues ( void ) const

inline

Get the Values member data.

Returns: Reference to the member data.

Definition at line 425 of file Int_graph_.hpp.

References CInt_graph_Base::m_Values.

Referenced by NSnpAnnot::EstimateSNPCount(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_Fingerprint_Int_graph(), sx_AddBits(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CSGAlignStatJob::x_CollectAlignStats(), CSnpJob::x_FetchGraphs(), CSGAlnQualityScore::x_RetrieveQualityMap(), CWiggleWriter::xContainsDataInt(), CBedGraphWriter::xWriteSingleGraphInt(), and CWiggleWriter::xWriteSingleGraphRecordsInt().

◆ GetValues() [3/3]

const CReal_graph_Base::TValues & CReal_graph_Base::GetValues ( void ) const

inline

Get the Values member data.

Returns: Reference to the member data.

Definition at line 428 of file Real_graph_.hpp.

References CReal_graph_Base::m_Values.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_Fingerprint_Real_graph(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CSGAlnQualityScore::x_RetrieveQualityMap(), CWiggleWriter::xContainsDataReal(), CBedGraphWriter::xWriteSingleGraphReal(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ IsByte()

bool CSeq_graph_Base::C_Graph::IsByte ( void ) const

inline

Check if variant Byte is selected.

Byte type is defined as 'typedef CByte_graph TByte'.

Returns

true, if the variant is selected.
false, otherwise.

Definition at line 757 of file Seq_graph_.hpp.

Referenced by SGraphMaker::AddActualValues(), NSnpAnnot::EstimateSNPCount(), CValidError_graph::IsSupportedGraphType(), CDemoApp::Run(), Split_Qscore_SeqGraph_By_DeltaSeq(), sx_AddBits(), TrimSeqGraph(), CValidError_graph::ValidateSeqGraph(), CValidError_graph::ValidateSeqGraphContext(), CSnpJob::x_FetchGraphs(), CBamRefSeqInfo::x_LoadRangesCov(), CWiggleWriter::xContainsDataByte(), CBedGraphWriter::xWriteSingleGraph(), and CWiggleWriter::xWriteSingleGraphRecordsByte().

◆ IsInt()

bool CSeq_graph_Base::C_Graph::IsInt ( void ) const

inline

Check if variant Int is selected.

Int type is defined as 'typedef CInt_graph TInt'.

Returns

true, if the variant is selected.
false, otherwise.

Definition at line 751 of file Seq_graph_.hpp.

Referenced by CSGAlignStatJob::x_CollectAlignStats(), CWiggleWriter::xContainsDataInt(), CBedGraphWriter::xWriteSingleGraph(), and CWiggleWriter::xWriteSingleGraphRecordsInt().

◆ IsReal()

bool CSeq_graph_Base::C_Graph::IsReal ( void ) const

inline

Check if variant Real is selected.

Real type is defined as 'typedef CReal_graph TReal'.

Returns

true, if the variant is selected.
false, otherwise.

Definition at line 745 of file Seq_graph_.hpp.

Referenced by CWiggleWriter::xContainsDataReal(), CBedGraphWriter::xWriteSingleGraph(), and CWiggleWriter::xWriteSingleGraphRecordsReal().

◆ IsSetA()

bool CSeq_graph_Base::IsSetA ( void ) const

inline

for scaling values Check if a value has been assigned to A data member.

Data member A is optional; its type is defined as 'typedef double TA'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 1028 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetA(), CMappedGraph::IsSetA(), CSeq_graph_Handle::IsSetA(), s_AddGraphToMap(), s_Fingerprint_Seq_graph(), and CSeq_graph_Base::SetA().

◆ IsSetAxis() [1/3]

bool CByte_graph_Base::IsSetAxis ( void ) const

inline

Check if a value has been assigned to Axis data member.

Data member Axis is mandatory; its type is defined as 'typedef int TAxis'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 367 of file Byte_graph_.hpp.

References CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::CanGetAxis(), and CByte_graph_Base::SetAxis().

◆ IsSetAxis() [2/3]

bool CInt_graph_Base::IsSetAxis ( void ) const

inline

Check if a value has been assigned to Axis data member.

Data member Axis is mandatory; its type is defined as 'typedef int TAxis'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 366 of file Int_graph_.hpp.

References CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::CanGetAxis(), and CInt_graph_Base::SetAxis().

◆ IsSetAxis() [3/3]

bool CReal_graph_Base::IsSetAxis ( void ) const

inline

value to draw axis on Check if a value has been assigned to Axis data member.

Data member Axis is mandatory; its type is defined as 'typedef double TAxis'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 369 of file Real_graph_.hpp.

References CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::CanGetAxis(), and CReal_graph_Base::SetAxis().

◆ IsSetB()

bool CSeq_graph_Base::IsSetB ( void ) const

inline

display = (a x value) + b Check if a value has been assigned to B data member.

Data member B is optional; its type is defined as 'typedef double TB'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 1075 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetB(), CMappedGraph::IsSetB(), CSeq_graph_Handle::IsSetB(), s_AddGraphToMap(), s_Fingerprint_Seq_graph(), and CSeq_graph_Base::SetB().

◆ IsSetComment()

bool CSeq_graph_Base::IsSetComment ( void ) const

inline

Check if a value has been assigned to Comment data member.

Data member Comment is optional; its type is defined as 'typedef string TComment'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 810 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetComment(), CMappedGraph::IsSetComment(), CSeq_graph_Handle::IsSetComment(), s_Fingerprint_Seq_graph(), and CSeq_graph_Base::SetComment().

◆ IsSetComp()

bool CSeq_graph_Base::IsSetComp ( void ) const

inline

compression (residues/value) Check if a value has been assigned to Comp data member.

Data member Comp is optional; its type is defined as 'typedef TSeqPos TComp'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 981 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetComp(), CMappedGraph::IsSetComp(), CSeq_graph_Handle::IsSetComp(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_AddGraphToMap(), CSeq_graph_Base::SetComp(), and CAlignmentAssistant::TrimQualityScores().

◆ IsSetGraph()

bool CSeq_graph_Base::IsSetGraph ( void ) const

inline

Check if a value has been assigned to Graph data member.

Data member Graph is mandatory; its type is defined as 'typedef C_Graph TGraph'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 1169 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Graph.

◆ IsSetLoc()

bool CSeq_graph_Base::IsSetLoc ( void ) const

inline

region this applies to Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CSeq_loc TLoc'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 857 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Loc.

Referenced by CModifySeqId::GetCommand(), CSeq_graph_Handle::IsSetLoc(), s_CompareTwoSeqGraphs(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CValidError_graph::ValidateGraphsOnBioseq(), CValidError_graph::ValidateSeqGraphContext(), CAutogeneratedCleanup::x_BasicCleanupSeqGraph(), and CValidError_graph::x_ValidateGraphLocation().

◆ IsSetMax() [1/3]

bool CByte_graph_Base::IsSetMax ( void ) const

inline

Check if a value has been assigned to Max data member.

Data member Max is mandatory; its type is defined as 'typedef int TMax'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 273 of file Byte_graph_.hpp.

References CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::CanGetMax(), and CByte_graph_Base::SetMax().

◆ IsSetMax() [2/3]

bool CInt_graph_Base::IsSetMax ( void ) const

inline

Check if a value has been assigned to Max data member.

Data member Max is mandatory; its type is defined as 'typedef int TMax'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 272 of file Int_graph_.hpp.

References CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::CanGetMax(), and CInt_graph_Base::SetMax().

◆ IsSetMax() [3/3]

bool CReal_graph_Base::IsSetMax ( void ) const

inline

top of graph Check if a value has been assigned to Max data member.

Data member Max is mandatory; its type is defined as 'typedef double TMax'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 275 of file Real_graph_.hpp.

References CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::CanGetMax(), and CReal_graph_Base::SetMax().

◆ IsSetMin() [1/3]

bool CByte_graph_Base::IsSetMin ( void ) const

inline

Check if a value has been assigned to Min data member.

Data member Min is mandatory; its type is defined as 'typedef int TMin'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 320 of file Byte_graph_.hpp.

References CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::CanGetMin(), and CByte_graph_Base::SetMin().

◆ IsSetMin() [2/3]

bool CInt_graph_Base::IsSetMin ( void ) const

inline

Check if a value has been assigned to Min data member.

Data member Min is mandatory; its type is defined as 'typedef int TMin'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 319 of file Int_graph_.hpp.

References CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::CanGetMin(), and CInt_graph_Base::SetMin().

◆ IsSetMin() [3/3]

bool CReal_graph_Base::IsSetMin ( void ) const

inline

bottom of graph Check if a value has been assigned to Min data member.

Data member Min is mandatory; its type is defined as 'typedef double TMin'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 322 of file Real_graph_.hpp.

References CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::CanGetMin(), and CReal_graph_Base::SetMin().

◆ IsSetNumval()

bool CSeq_graph_Base::IsSetNumval ( void ) const

inline

number of values in graph Check if a value has been assigned to Numval data member.

Data member Numval is mandatory; its type is defined as 'typedef TSeqPos TNumval'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 1122 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetNumval(), and CSeq_graph_Base::SetNumval().

◆ IsSetTitle()

bool CSeq_graph_Base::IsSetTitle ( void ) const

inline

Check if a value has been assigned to Title data member.

Data member Title is optional; its type is defined as 'typedef string TTitle'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 763 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetTitle(), CMappedGraph::IsSetTitle(), CSeq_graph_Handle::IsSetTitle(), CValidError_graph::IsSupportedGraphType(), CValidError_imp::PostErr(), CDemoApp::Run(), s_Fingerprint_Seq_graph(), CSeq_graph_Base::SetTitle(), and Split_Qscore_SeqGraph_By_DeltaSeq().

◆ IsSetTitle_x()

bool CSeq_graph_Base::IsSetTitle_x ( void ) const

inline

title for x-axis Check if a value has been assigned to Title_x data member.

Data member Title_x is optional; its type is defined as 'typedef string TTitle_x'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 887 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetTitle_x(), CMappedGraph::IsSetTitle_x(), CSeq_graph_Handle::IsSetTitle_x(), s_Fingerprint_Seq_graph(), and CSeq_graph_Base::SetTitle_x().

◆ IsSetTitle_y()

bool CSeq_graph_Base::IsSetTitle_y ( void ) const

inline

Check if a value has been assigned to Title_y data member.

Data member Title_y is optional; its type is defined as 'typedef string TTitle_y'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 934 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::CanGetTitle_y(), CMappedGraph::IsSetTitle_y(), CSeq_graph_Handle::IsSetTitle_y(), s_Fingerprint_Seq_graph(), and CSeq_graph_Base::SetTitle_y().

◆ IsSetValues() [1/3]

bool CByte_graph_Base::IsSetValues ( void ) const

inline

Check if a value has been assigned to Values data member.

Data member Values is mandatory; its type is defined as 'typedef vector< char > TValues'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 414 of file Byte_graph_.hpp.

References CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::CanGetValues(), and CQualScoreWriter::Write().

◆ IsSetValues() [2/3]

bool CInt_graph_Base::IsSetValues ( void ) const

inline

Check if a value has been assigned to Values data member.

Data member Values is mandatory; its type is defined as 'typedef vector< int > TValues'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 413 of file Int_graph_.hpp.

References CInt_graph_Base::m_set_State.

◆ IsSetValues() [3/3]

bool CReal_graph_Base::IsSetValues ( void ) const

inline

Check if a value has been assigned to Values data member.

Data member Values is mandatory; its type is defined as 'typedef vector< double > TValues'

Returns

true, if a value has been assigned.
false, otherwise.

Definition at line 416 of file Real_graph_.hpp.

References CReal_graph_Base::m_set_State.

◆ operator=() [1/8]

C_Graph& CSeq_graph_Base::C_Graph::operator= ( const C_Graph & )

private

◆ operator=() [2/8]

CByte_graph& CByte_graph::operator= ( const CByte_graph & value )

private

◆ operator=() [3/8]

CByte_graph_Base& CByte_graph_Base::operator= ( const CByte_graph_Base & )

private

◆ operator=() [4/8]

CInt_graph& CInt_graph::operator= ( const CInt_graph & value )

private

◆ operator=() [5/8]

CInt_graph_Base& CInt_graph_Base::operator= ( const CInt_graph_Base & )

private

◆ operator=() [6/8]

CReal_graph& CReal_graph::operator= ( const CReal_graph & value )

private

◆ operator=() [7/8]

CReal_graph_Base& CReal_graph_Base::operator= ( const CReal_graph_Base & )

private

◆ operator=() [8/8]

CSeq_graph_Base& CSeq_graph_Base::operator= ( const CSeq_graph_Base & )

private

◆ Reset() [1/5]

void CByte_graph_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 56 of file Byte_graph_.cpp.

References CByte_graph_Base::ResetAxis(), CByte_graph_Base::ResetMax(), CByte_graph_Base::ResetMin(), and CByte_graph_Base::ResetValues().

◆ Reset() [2/5]

void CInt_graph_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 56 of file Int_graph_.cpp.

References CInt_graph_Base::ResetAxis(), CInt_graph_Base::ResetMax(), CInt_graph_Base::ResetMin(), and CInt_graph_Base::ResetValues().

◆ Reset() [3/5]

void CReal_graph_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 56 of file Real_graph_.cpp.

References CReal_graph_Base::ResetAxis(), CReal_graph_Base::ResetMax(), CReal_graph_Base::ResetMin(), and CReal_graph_Base::ResetValues().

◆ Reset() [4/5]

void CSeq_graph_Base::C_Graph::Reset ( void )

Reset the whole object.

Definition at line 54 of file Seq_graph_.cpp.

References CSeq_graph_Base::C_Graph::e_not_set, CSeq_graph_Base::C_Graph::m_choice, and CSeq_graph_Base::C_Graph::ResetSelection().

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CVectorTrimPanel::x_TrimSeqGraphData(), and CReportTrim::x_TrimSeqGraphData().

◆ Reset() [5/5]

void CSeq_graph_Base::Reset ( void )

virtual

Reset the whole object.

Definition at line 255 of file Seq_graph_.cpp.

References CSeq_graph_Base::ResetA(), CSeq_graph_Base::ResetB(), CSeq_graph_Base::ResetComment(), CSeq_graph_Base::ResetComp(), CSeq_graph_Base::ResetGraph(), CSeq_graph_Base::ResetLoc(), CSeq_graph_Base::ResetNumval(), CSeq_graph_Base::ResetTitle(), CSeq_graph_Base::ResetTitle_x(), and CSeq_graph_Base::ResetTitle_y().

Referenced by CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Graph::SetNvalue(), CSeqEdit_Cmd_ReplaceAnnot_Base::C_Data::C_Graph::SetOvalue(), and CSeq_graph_Base::C_Graph::~C_Graph().

◆ ResetA()

void CSeq_graph_Base::ResetA ( void )

inline

Reset A data member.

Definition at line 1040 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_A, and CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::Reset().

◆ ResetAxis() [1/3]

void CByte_graph_Base::ResetAxis ( void )

inline

Reset Axis data member.

Definition at line 379 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Axis, and CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::Reset().

◆ ResetAxis() [2/3]

void CInt_graph_Base::ResetAxis ( void )

inline

Reset Axis data member.

Definition at line 378 of file Int_graph_.hpp.

References CInt_graph_Base::m_Axis, and CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::Reset().

◆ ResetAxis() [3/3]

void CReal_graph_Base::ResetAxis ( void )

inline

Reset Axis data member.

Definition at line 381 of file Real_graph_.hpp.

References CReal_graph_Base::m_Axis, and CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::Reset().

◆ ResetB()

void CSeq_graph_Base::ResetB ( void )

inline

Reset B data member.

Definition at line 1087 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_B, and CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::Reset().

◆ ResetComment()

void CSeq_graph_Base::ResetComment ( void )

Reset Comment data member.

Definition at line 209 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_Comment, and CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::Reset().

◆ ResetComp()

void CSeq_graph_Base::ResetComp ( void )

inline

Reset Comp data member.

Definition at line 993 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Comp, and CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::Reset().

◆ ResetGraph()

void CSeq_graph_Base::ResetGraph ( void )

Reset Graph data member.

Definition at line 241 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_Graph.

Referenced by CSeq_graph_Base::CSeq_graph_Base(), CSeq_graph_Base::GetGraph(), CSeq_graph_Base::Reset(), and CSeq_graph_Base::SetGraph().

◆ ResetLoc()

void CSeq_graph_Base::ResetLoc ( void )

Reset Loc data member.

Definition at line 215 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_Loc.

Referenced by BOOST_AUTO_TEST_CASE(), CSeq_graph_Base::CSeq_graph_Base(), CSeq_graph_Base::GetLoc(), CSeq_graph_Base::Reset(), CSeq_graph_Base::SetLoc(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ ResetMax() [1/3]

void CByte_graph_Base::ResetMax ( void )

inline

Reset Max data member.

Definition at line 285 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Max, and CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::Reset().

◆ ResetMax() [2/3]

void CInt_graph_Base::ResetMax ( void )

inline

Reset Max data member.

Definition at line 284 of file Int_graph_.hpp.

References CInt_graph_Base::m_Max, and CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::Reset().

◆ ResetMax() [3/3]

void CReal_graph_Base::ResetMax ( void )

inline

Reset Max data member.

Definition at line 287 of file Real_graph_.hpp.

References CReal_graph_Base::m_Max, and CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::Reset().

◆ ResetMin() [1/3]

void CByte_graph_Base::ResetMin ( void )

inline

Reset Min data member.

Definition at line 332 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Min, and CByte_graph_Base::m_set_State.

Referenced by CByte_graph_Base::Reset().

◆ ResetMin() [2/3]

void CInt_graph_Base::ResetMin ( void )

inline

Reset Min data member.

Definition at line 331 of file Int_graph_.hpp.

References CInt_graph_Base::m_Min, and CInt_graph_Base::m_set_State.

Referenced by CInt_graph_Base::Reset().

◆ ResetMin() [3/3]

void CReal_graph_Base::ResetMin ( void )

inline

Reset Min data member.

Definition at line 334 of file Real_graph_.hpp.

References CReal_graph_Base::m_Min, and CReal_graph_Base::m_set_State.

Referenced by CReal_graph_Base::Reset().

◆ ResetNumval()

void CSeq_graph_Base::ResetNumval ( void )

inline

Reset Numval data member.

Definition at line 1134 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Numval, and CSeq_graph_Base::m_set_State.

Referenced by CSeq_graph_Base::Reset().

◆ ResetSelection()

void CSeq_graph_Base::C_Graph::ResetSelection ( void )

Reset the selection (set it to e_not_set).

Definition at line 60 of file Seq_graph_.cpp.

References e_not_set.

Referenced by CSeq_graph_Base::C_Graph::Reset().

◆ ResetTitle()

void CSeq_graph_Base::ResetTitle ( void )

Reset Title data member.

Definition at line 203 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_set_State, and CSeq_graph_Base::m_Title.

Referenced by CSeq_graph_Base::Reset().

◆ ResetTitle_x()

void CSeq_graph_Base::ResetTitle_x ( void )

Reset Title_x data member.

Definition at line 229 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_set_State, and CSeq_graph_Base::m_Title_x.

Referenced by CSeq_graph_Base::Reset().

◆ ResetTitle_y()

void CSeq_graph_Base::ResetTitle_y ( void )

Reset Title_y data member.

Definition at line 235 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_set_State, and CSeq_graph_Base::m_Title_y.

Referenced by CSeq_graph_Base::Reset().

◆ ResetValues() [1/3]

void CByte_graph_Base::ResetValues ( void )

Reset Values data member.

Definition at line 50 of file Byte_graph_.cpp.

References CByte_graph_Base::m_set_State, and CByte_graph_Base::m_Values.

Referenced by BOOST_AUTO_TEST_CASE(), CByte_graph_Base::Reset(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ ResetValues() [2/3]

void CInt_graph_Base::ResetValues ( void )

Reset Values data member.

Definition at line 50 of file Int_graph_.cpp.

References CInt_graph_Base::m_set_State, and CInt_graph_Base::m_Values.

Referenced by CInt_graph_Base::Reset(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ ResetValues() [3/3]

void CReal_graph_Base::ResetValues ( void )

Reset Values data member.

Definition at line 50 of file Real_graph_.cpp.

References CReal_graph_Base::m_set_State, and CReal_graph_Base::m_Values.

Referenced by CReal_graph_Base::Reset(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ Select() [1/2]

void CSeq_graph_Base::C_Graph::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

◆ Select() [2/2]

void CSeq_graph_Base::C_Graph::Select	(	E_Choice	index,
		EResetVariant	reset = `eDoResetVariant`
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

◆ SelectionName()

NCBI_NS_STD::string CSeq_graph_Base::C_Graph::SelectionName ( E_Choice index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index One of possible selection states.

Returns: Name string.

Definition at line 99 of file Seq_graph_.cpp.

◆ SetA() [1/2]

void CSeq_graph_Base::SetA ( CSeq_graph_Base::TA value )

inline

Assign a value to A data member.

Parameters

value Value to assign

Definition at line 1056 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_A, CSeq_graph_Base::m_set_State, and rapidjson::value.

Referenced by CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CBam2Seq_graph::MakeSeq_annot(), CVDBGraphSeqIterator::x_MakeGraph(), and CWiggleReader::xMakeGraph().

◆ SetA() [2/2]

CSeq_graph_Base::TA & CSeq_graph_Base::SetA ( void )

inline

Assign a value to A data member.

Returns: Reference to the data value.

Definition at line 1063 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetA(), CSeq_graph_Base::m_A, CSeq_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetAxis() [1/6]

void CByte_graph_Base::SetAxis ( CByte_graph_Base::TAxis value )

inline

Assign a value to Axis data member.

Parameters

value Value to assign

Definition at line 395 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Axis, CByte_graph_Base::m_set_State, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetAxis() [2/6]

void CInt_graph_Base::SetAxis ( CInt_graph_Base::TAxis value )

inline

Assign a value to Axis data member.

Parameters

value Value to assign

Definition at line 394 of file Int_graph_.hpp.

References CInt_graph_Base::m_Axis, CInt_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetAxis() [3/6]

void CReal_graph_Base::SetAxis ( CReal_graph_Base::TAxis value )

inline

Assign a value to Axis data member.

Parameters

value Value to assign

Definition at line 397 of file Real_graph_.hpp.

References CReal_graph_Base::m_Axis, CReal_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetAxis() [4/6]

CByte_graph_Base::TAxis & CByte_graph_Base::SetAxis ( void )

inline

Assign a value to Axis data member.

Returns: Reference to the data value.

Definition at line 402 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetAxis(), CByte_graph_Base::m_Axis, CByte_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetAxis() [5/6]

CInt_graph_Base::TAxis & CInt_graph_Base::SetAxis ( void )

inline

Assign a value to Axis data member.

Returns: Reference to the data value.

Definition at line 401 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetAxis(), CInt_graph_Base::m_Axis, CInt_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetAxis() [6/6]

CReal_graph_Base::TAxis & CReal_graph_Base::SetAxis ( void )

inline

Assign a value to Axis data member.

Returns: Reference to the data value.

Definition at line 404 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetAxis(), CReal_graph_Base::m_Axis, CReal_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetB() [1/2]

void CSeq_graph_Base::SetB ( CSeq_graph_Base::TB value )

inline

Assign a value to B data member.

Parameters

value Value to assign

Definition at line 1103 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_B, CSeq_graph_Base::m_set_State, and rapidjson::value.

Referenced by CWig2tableApplication::MakeGraph(), CBam2Seq_graph::MakeSeq_annot(), and CWiggleReader::xMakeGraph().

◆ SetB() [2/2]

CSeq_graph_Base::TB & CSeq_graph_Base::SetB ( void )

inline

Assign a value to B data member.

Returns: Reference to the data value.

Definition at line 1110 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetB(), CSeq_graph_Base::m_B, CSeq_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetByte() [1/2]

void CSeq_graph_Base::C_Graph::SetByte ( TByte & value )

Select the variant and set its data.

Parameters

value Reference to the data.

Definition at line 165 of file Seq_graph_.cpp.

References CObject::AddReference(), and rapidjson::value.

◆ SetByte() [2/2]

CSeq_graph_Base::C_Graph::TByte & CSeq_graph_Base::C_Graph::SetByte ( void )

Select the variant.

Returns: Reference to the variant data.

Definition at line 159 of file Seq_graph_.cpp.

References eDoNotResetVariant.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), and CReportTrim::x_TrimSeqGraphData().

◆ SetComment() [1/3]

void CSeq_graph_Base::SetComment ( const TComment & value )

inline

Assign a value to Comment data member.

Parameters

value Value to assign

Definition at line 831 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Comment, CSeq_graph_Base::m_set_State, and rapidjson::value.

Referenced by CVDBGraphSeqIterator::x_MakeGraph().

◆ SetComment() [2/3]

void CSeq_graph_Base::SetComment ( CSeq_graph_Base::TComment && value )

inline

Definition at line 838 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Comment, CSeq_graph_Base::m_set_State, and rapidjson::value.

◆ SetComment() [3/3]

CSeq_graph_Base::TComment & CSeq_graph_Base::SetComment ( void )

inline

Assign a value to Comment data member.

Returns: Reference to the data value.

Definition at line 845 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetComment(), CSeq_graph_Base::m_Comment, CSeq_graph_Base::m_set_State, and CSerialObject::UnassignedString().

◆ SetComp() [1/2]

void CSeq_graph_Base::SetComp ( CSeq_graph_Base::TComp value )

inline

Assign a value to Comp data member.

Parameters

value Value to assign

Definition at line 1009 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Comp, CSeq_graph_Base::m_set_State, and rapidjson::value.

Referenced by CCSraRefSeqIterator::GetCoverageGraph(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), SGraphMaker::x_EndGraph(), CVDBGraphSeqIterator::x_MakeGraph(), and CWiggleReader::xMakeGraph().

◆ SetComp() [2/2]

CSeq_graph_Base::TComp & CSeq_graph_Base::SetComp ( void )

inline

Assign a value to Comp data member.

Returns: Reference to the data value.

Definition at line 1016 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetComp(), CSeq_graph_Base::m_Comp, CSeq_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetGraph() [1/2]

void CSeq_graph_Base::SetGraph ( CSeq_graph_Base::TGraph & value )

Assign a value to Graph data member.

Parameters

value Reference to value.

Definition at line 250 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_Graph, and rapidjson::value.

Referenced by SGraphMaker::AddActualValues(), SGraphMaker::AddActualZeroes(), BOOST_AUTO_TEST_CASE(), BuildGoodByteGraph(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CCSRARefSeqInfo::LoadAnnotPileupChunk(), CBamRefSeqInfo::LoadPileupChunk(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), QSbuf_To_Single_Qscore_SeqGraph(), CRevCompSequencesDlg::RevCompBioSeq(), Split_Qscore_SeqGraph_By_DeltaSeq(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CPhrap_Contig::x_CreateGraph(), SGraphMaker::x_EndGraph(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVDBGraphSeqIterator::x_MakeGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetGraph() [2/2]

CSeq_graph_Base::TGraph & CSeq_graph_Base::SetGraph ( void )

inline

Assign a value to Graph data member.

Returns: Reference to the data value.

Definition at line 1190 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Graph, and CSeq_graph_Base::ResetGraph().

◆ SetInt() [1/2]

void CSeq_graph_Base::C_Graph::SetInt ( TInt & value )

Select the variant and set its data.

Parameters

value Reference to the data.

Definition at line 143 of file Seq_graph_.cpp.

References CObject::AddReference(), and rapidjson::value.

◆ SetInt() [2/2]

CSeq_graph_Base::C_Graph::TInt & CSeq_graph_Base::C_Graph::SetInt ( void )

Select the variant.

Returns: Reference to the variant data.

Definition at line 137 of file Seq_graph_.cpp.

References eDoNotResetVariant.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ SetLoc() [1/2]

void CSeq_graph_Base::SetLoc ( CSeq_graph_Base::TLoc & value )

Assign a value to Loc data member.

Parameters

value Reference to value.

Definition at line 224 of file Seq_graph_.cpp.

References CSeq_graph_Base::m_Loc, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE(), BuildGoodByteGraph(), BuildGoodGraphAnnot(), CModifySeqId::GetCommand(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CCSRARefSeqInfo::LoadAnnotPileupChunk(), CBamRefSeqInfo::LoadPileupChunk(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), QSbuf_To_Single_Qscore_SeqGraph(), CRevCompSequencesDlg::RevCompBioSeq(), s_UpdateSeqGraphLoc(), Split_Qscore_SeqGraph_By_DeltaSeq(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CAutogeneratedCleanup::x_BasicCleanupSeqGraph(), CPhrap_Contig::x_CreateGraph(), SGraphMaker::x_EndGraph(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVDBGraphSeqIterator::x_MakeGraph(), CVectorTrimPanel::x_UpdateSeqGraphLoc(), CReportTrim::x_UpdateSeqGraphLoc(), and CWiggleReader::xMakeGraph().

◆ SetLoc() [2/2]

CSeq_graph_Base::TLoc & CSeq_graph_Base::SetLoc ( void )

inline

Assign a value to Loc data member.

Returns: Reference to the data value.

Definition at line 878 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Loc, and CSeq_graph_Base::ResetLoc().

◆ SetMax() [1/6]

void CByte_graph_Base::SetMax ( CByte_graph_Base::TMax value )

inline

Assign a value to Max data member.

Parameters

value Value to assign

Definition at line 301 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Max, CByte_graph_Base::m_set_State, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetMax() [2/6]

void CInt_graph_Base::SetMax ( CInt_graph_Base::TMax value )

inline

Assign a value to Max data member.

Parameters

value Value to assign

Definition at line 300 of file Int_graph_.hpp.

References CInt_graph_Base::m_Max, CInt_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetMax() [3/6]

void CReal_graph_Base::SetMax ( CReal_graph_Base::TMax value )

inline

Assign a value to Max data member.

Parameters

value Value to assign

Definition at line 303 of file Real_graph_.hpp.

References CReal_graph_Base::m_Max, CReal_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetMax() [4/6]

CByte_graph_Base::TMax & CByte_graph_Base::SetMax ( void )

inline

Assign a value to Max data member.

Returns: Reference to the data value.

Definition at line 308 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetMax(), CByte_graph_Base::m_Max, CByte_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetMax() [5/6]

CInt_graph_Base::TMax & CInt_graph_Base::SetMax ( void )

inline

Assign a value to Max data member.

Returns: Reference to the data value.

Definition at line 307 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetMax(), CInt_graph_Base::m_Max, CInt_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetMax() [6/6]

CReal_graph_Base::TMax & CReal_graph_Base::SetMax ( void )

inline

Assign a value to Max data member.

Returns: Reference to the data value.

Definition at line 310 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetMax(), CReal_graph_Base::m_Max, CReal_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetMin() [1/6]

void CByte_graph_Base::SetMin ( CByte_graph_Base::TMin value )

inline

Assign a value to Min data member.

Parameters

value Value to assign

Definition at line 348 of file Byte_graph_.hpp.

References CByte_graph_Base::m_Min, CByte_graph_Base::m_set_State, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetMin() [2/6]

void CInt_graph_Base::SetMin ( CInt_graph_Base::TMin value )

inline

Assign a value to Min data member.

Parameters

value Value to assign

Definition at line 347 of file Int_graph_.hpp.

References CInt_graph_Base::m_Min, CInt_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetMin() [3/6]

void CReal_graph_Base::SetMin ( CReal_graph_Base::TMin value )

inline

Assign a value to Min data member.

Parameters

value Value to assign

Definition at line 350 of file Real_graph_.hpp.

References CReal_graph_Base::m_Min, CReal_graph_Base::m_set_State, and rapidjson::value.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetMin() [4/6]

CByte_graph_Base::TMin & CByte_graph_Base::SetMin ( void )

inline

Assign a value to Min data member.

Returns: Reference to the data value.

Definition at line 355 of file Byte_graph_.hpp.

References CByte_graph_Base::IsSetMin(), CByte_graph_Base::m_Min, CByte_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetMin() [5/6]

CInt_graph_Base::TMin & CInt_graph_Base::SetMin ( void )

inline

Assign a value to Min data member.

Returns: Reference to the data value.

Definition at line 354 of file Int_graph_.hpp.

References CInt_graph_Base::IsSetMin(), CInt_graph_Base::m_Min, CInt_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetMin() [6/6]

CReal_graph_Base::TMin & CReal_graph_Base::SetMin ( void )

inline

Assign a value to Min data member.

Returns: Reference to the data value.

Definition at line 357 of file Real_graph_.hpp.

References CReal_graph_Base::IsSetMin(), CReal_graph_Base::m_Min, CReal_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetNumval() [1/2]

void CSeq_graph_Base::SetNumval ( CSeq_graph_Base::TNumval value )

inline

Assign a value to Numval data member.

Parameters

value Value to assign

Definition at line 1150 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_Numval, CSeq_graph_Base::m_set_State, and rapidjson::value.

Referenced by BOOST_AUTO_TEST_CASE(), BuildGoodByteGraph(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CCSRARefSeqInfo::LoadAnnotPileupChunk(), CBamRefSeqInfo::LoadPileupChunk(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), QSbuf_To_Single_Qscore_SeqGraph(), Split_Qscore_SeqGraph_By_DeltaSeq(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CPhrap_Contig::x_CreateGraph(), SGraphMaker::x_EndGraph(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVDBGraphSeqIterator::x_MakeGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetNumval() [2/2]

CSeq_graph_Base::TNumval & CSeq_graph_Base::SetNumval ( void )

inline

Assign a value to Numval data member.

Returns: Reference to the data value.

Definition at line 1157 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetNumval(), CSeq_graph_Base::m_Numval, CSeq_graph_Base::m_set_State, and CSerialObject::UnassignedByte().

◆ SetReal() [1/2]

void CSeq_graph_Base::C_Graph::SetReal ( TReal & value )

Select the variant and set its data.

Parameters

value Reference to the data.

Definition at line 121 of file Seq_graph_.cpp.

References CObject::AddReference(), and rapidjson::value.

◆ SetReal() [2/2]

CSeq_graph_Base::C_Graph::TReal & CSeq_graph_Base::C_Graph::SetReal ( void )

Select the variant.

Returns: Reference to the variant data.

Definition at line 115 of file Seq_graph_.cpp.

References eDoNotResetVariant.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), and CAlignmentAssistant::TrimQualityScores().

◆ SetTitle() [1/3]

void CSeq_graph_Base::SetTitle ( const TTitle & value )

inline

Assign a value to Title data member.

Parameters

value Value to assign

Definition at line 784 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title, and rapidjson::value.

Referenced by BuildGoodByteGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CCSRARefSeqInfo::LoadAnnotPileupChunk(), CBamRefSeqInfo::LoadPileupChunk(), CWig2tableApplication::MakeGraph(), QSbuf_To_Single_Qscore_SeqGraph(), Split_Qscore_SeqGraph_By_DeltaSeq(), sx_SetTitle(), CPhrap_Contig::x_CreateGraph(), SGraphMaker::x_EndGraph(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVDBGraphSeqIterator::x_MakeGraph(), and CWiggleReader::xMakeGraph().

◆ SetTitle() [2/3]

void CSeq_graph_Base::SetTitle ( CSeq_graph_Base::TTitle && value )

inline

Definition at line 791 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title, and rapidjson::value.

◆ SetTitle() [3/3]

CSeq_graph_Base::TTitle & CSeq_graph_Base::SetTitle ( void )

inline

Assign a value to Title data member.

Returns: Reference to the data value.

Definition at line 798 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle(), CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title, and CSerialObject::UnassignedString().

◆ SetTitle_x() [1/3]

void CSeq_graph_Base::SetTitle_x ( const TTitle_x & value )

inline

Assign a value to Title_x data member.

Parameters

value Value to assign

Definition at line 908 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_x, and rapidjson::value.

◆ SetTitle_x() [2/3]

void CSeq_graph_Base::SetTitle_x ( CSeq_graph_Base::TTitle_x && value )

inline

Definition at line 915 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_x, and rapidjson::value.

◆ SetTitle_x() [3/3]

CSeq_graph_Base::TTitle_x & CSeq_graph_Base::SetTitle_x ( void )

inline

Assign a value to Title_x data member.

Returns: Reference to the data value.

Definition at line 922 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle_x(), CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_x, and CSerialObject::UnassignedString().

◆ SetTitle_y() [1/3]

void CSeq_graph_Base::SetTitle_y ( const TTitle_y & value )

inline

Assign a value to Title_y data member.

Parameters

value Value to assign

Definition at line 955 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_y, and rapidjson::value.

◆ SetTitle_y() [2/3]

void CSeq_graph_Base::SetTitle_y ( CSeq_graph_Base::TTitle_y && value )

inline

Definition at line 962 of file Seq_graph_.hpp.

References CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_y, and rapidjson::value.

◆ SetTitle_y() [3/3]

CSeq_graph_Base::TTitle_y & CSeq_graph_Base::SetTitle_y ( void )

inline

Assign a value to Title_y data member.

Returns: Reference to the data value.

Definition at line 969 of file Seq_graph_.hpp.

References CSeq_graph_Base::IsSetTitle_y(), CSeq_graph_Base::m_set_State, CSeq_graph_Base::m_Title_y, and CSerialObject::UnassignedString().

◆ SetValues() [1/3]

CByte_graph_Base::TValues & CByte_graph_Base::SetValues ( void )

inline

Assign a value to Values data member.

Returns: Reference to the data value.

Definition at line 435 of file Byte_graph_.hpp.

References CByte_graph_Base::m_set_State, and CByte_graph_Base::m_Values.

Referenced by BOOST_AUTO_TEST_CASE(), CCSraRefSeqIterator::GetCoverageGraph(), CCSraAlignIterator::GetQualityGraph(), CSraRun::GetSpotEntry(), CBamIndex::MakeEstimatedCoverageAnnot(), CWig2tableApplication::MakeGraph(), CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), TrimSeqGraph(), CWGSSeqIterator::x_GetQualityAnnot(), CCSraShortReadIterator::x_GetQualityGraph(), CVectorTrimPanel::x_TrimSeqGraphData(), CReportTrim::x_TrimSeqGraphData(), and CWiggleReader::xMakeGraph().

◆ SetValues() [2/3]

CInt_graph_Base::TValues & CInt_graph_Base::SetValues ( void )

inline

Assign a value to Values data member.

Returns: Reference to the data value.

Definition at line 431 of file Int_graph_.hpp.

References CInt_graph_Base::m_set_State, and CInt_graph_Base::m_Values.

Referenced by CMappedGraph::MakeMappedGraphData(), CBam2Seq_graph::MakeSeq_annot(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ SetValues() [3/3]

CReal_graph_Base::TValues & CReal_graph_Base::SetValues ( void )

inline

Assign a value to Values data member.

Returns: Reference to the data value.

Definition at line 434 of file Real_graph_.hpp.

References CReal_graph_Base::m_set_State, and CReal_graph_Base::m_Values.

Referenced by CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), and CVDBGraphSeqIterator::x_MakeGraph().

◆ ThrowInvalidSelection()

void CSeq_graph_Base::C_Graph::ThrowInvalidSelection ( E_Choice index ) const

Throw 'InvalidSelection' exception.

Parameters

index Expected selection.

Definition at line 104 of file Seq_graph_.cpp.

References DIAG_COMPILE_INFO.

◆ Which()

CSeq_graph_Base::C_Graph::E_Choice CSeq_graph_Base::C_Graph::Which ( void ) const

inline

Which variant is currently selected.

Returns: Choice state enumerator.

Definition at line 716 of file Seq_graph_.hpp.

References CSeq_graph_Base::C_Graph::m_choice.

Referenced by CTraceDataProxy::LoadData(), CSGTraceGraphDS::LoadData(), CMappedGraph::MakeMappedGraphData(), CSeq_loc_Mapper_Base::Map(), s_Fingerprint_Seq_graph(), CEditSeqEndsWithAlign::TrimQualityScores(), CAlignmentAssistant::TrimQualityScores(), CSGAnnotJob::x_AddGraphObject(), CSGAlnQualityScore::x_RetrieveQualityMap(), CVectorTrimPanel::x_TrimSeqGraphData(), and CReportTrim::x_TrimSeqGraphData().

◆ ~C_Graph()

CSeq_graph_Base::C_Graph::~C_Graph ( void )

Definition at line 197 of file Seq_graph_.cpp.

References CSeq_graph_Base::Reset().

◆ ~CByte_graph()

CByte_graph::~CByte_graph ( void )

Definition at line 50 of file Byte_graph.cpp.

◆ ~CByte_graph_Base()

CByte_graph_Base::~CByte_graph_Base ( void )

virtual

Definition at line 85 of file Byte_graph_.cpp.

◆ ~CInt_graph()

CInt_graph::~CInt_graph ( void )

Definition at line 50 of file Int_graph.cpp.

◆ ~CInt_graph_Base()

CInt_graph_Base::~CInt_graph_Base ( void )

virtual

Definition at line 85 of file Int_graph_.cpp.

◆ ~CReal_graph()

CReal_graph::~CReal_graph ( void )

Definition at line 50 of file Real_graph.cpp.

◆ ~CReal_graph_Base()

CReal_graph_Base::~CReal_graph_Base ( void )

virtual

Definition at line 85 of file Real_graph_.cpp.

◆ ~CSeq_graph_Base()

CSeq_graph_Base::~CSeq_graph_Base ( void )

virtual

Definition at line 300 of file Seq_graph_.cpp.

Variable Documentation

◆ m_A

double CSeq_graph_Base::m_A

private

Definition at line 700 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetA(), CSeq_graph_Base::ResetA(), and CSeq_graph_Base::SetA().

◆ m_Axis [1/3]

int CByte_graph_Base::m_Axis

private

Definition at line 259 of file Byte_graph_.hpp.

Referenced by CByte_graph_Base::GetAxis(), CByte_graph_Base::ResetAxis(), and CByte_graph_Base::SetAxis().

◆ m_Axis [2/3]

int CInt_graph_Base::m_Axis

private

Definition at line 258 of file Int_graph_.hpp.

Referenced by CInt_graph_Base::GetAxis(), CInt_graph_Base::ResetAxis(), and CInt_graph_Base::SetAxis().

◆ m_Axis [3/3]

double CReal_graph_Base::m_Axis

private

Definition at line 261 of file Real_graph_.hpp.

Referenced by CReal_graph_Base::GetAxis(), CReal_graph_Base::ResetAxis(), and CReal_graph_Base::SetAxis().

◆ m_B

double CSeq_graph_Base::m_B

private

Definition at line 701 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetB(), CSeq_graph_Base::ResetB(), and CSeq_graph_Base::SetB().

◆ m_choice

E_Choice CSeq_graph_Base::C_Graph::m_choice

private

Definition at line 264 of file Seq_graph_.hpp.

Referenced by CSeq_graph_Base::C_Graph::Reset(), and CSeq_graph_Base::C_Graph::Which().

◆ m_Comment

string CSeq_graph_Base::m_Comment

private

Definition at line 695 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetComment(), CSeq_graph_Base::ResetComment(), and CSeq_graph_Base::SetComment().

◆ m_Comp

TSeqPos CSeq_graph_Base::m_Comp

private

Definition at line 699 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetComp(), CSeq_graph_Base::ResetComp(), and CSeq_graph_Base::SetComp().

◆ m_Graph

CRef< TGraph > CSeq_graph_Base::m_Graph

private

Definition at line 703 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetGraph(), CSeq_graph_Base::IsSetGraph(), CSeq_graph_Base::ResetGraph(), and CSeq_graph_Base::SetGraph().

◆ m_Loc

CRef< TLoc > CSeq_graph_Base::m_Loc

private

Definition at line 696 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetLoc(), CSeq_graph_Base::IsSetLoc(), CSeq_graph_Base::ResetLoc(), and CSeq_graph_Base::SetLoc().

◆ m_Max [1/3]

int CByte_graph_Base::m_Max

private

Definition at line 257 of file Byte_graph_.hpp.

Referenced by CByte_graph_Base::GetMax(), CByte_graph_Base::ResetMax(), and CByte_graph_Base::SetMax().

◆ m_Max [2/3]

int CInt_graph_Base::m_Max

private

Definition at line 256 of file Int_graph_.hpp.

Referenced by CInt_graph_Base::GetMax(), CInt_graph_Base::ResetMax(), and CInt_graph_Base::SetMax().

◆ m_Max [3/3]

double CReal_graph_Base::m_Max

private

Definition at line 259 of file Real_graph_.hpp.

Referenced by CReal_graph_Base::GetMax(), CReal_graph_Base::ResetMax(), and CReal_graph_Base::SetMax().

◆ m_Min [1/3]

int CByte_graph_Base::m_Min

private

Definition at line 258 of file Byte_graph_.hpp.

Referenced by CByte_graph_Base::GetMin(), CByte_graph_Base::ResetMin(), and CByte_graph_Base::SetMin().

◆ m_Min [2/3]

int CInt_graph_Base::m_Min

private

Definition at line 257 of file Int_graph_.hpp.

Referenced by CInt_graph_Base::GetMin(), CInt_graph_Base::ResetMin(), and CInt_graph_Base::SetMin().

◆ m_Min [3/3]

double CReal_graph_Base::m_Min

private

Definition at line 260 of file Real_graph_.hpp.

Referenced by CReal_graph_Base::GetMin(), CReal_graph_Base::ResetMin(), and CReal_graph_Base::SetMin().

◆ m_Numval

TSeqPos CSeq_graph_Base::m_Numval

private

Definition at line 702 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetNumval(), CSeq_graph_Base::ResetNumval(), and CSeq_graph_Base::SetNumval().

◆ m_object

NCBI_NS_NCBI::CSerialObject* CSeq_graph_Base::C_Graph::m_object

private

Definition at line 270 of file Seq_graph_.hpp.

◆ m_set_State [1/4]

Uint4 CByte_graph_Base::m_set_State[1]

private

Definition at line 256 of file Byte_graph_.hpp.

Referenced by CByte_graph_Base::CByte_graph_Base(), CByte_graph_Base::IsSetAxis(), CByte_graph_Base::IsSetMax(), CByte_graph_Base::IsSetMin(), CByte_graph_Base::IsSetValues(), CByte_graph_Base::ResetAxis(), CByte_graph_Base::ResetMax(), CByte_graph_Base::ResetMin(), CByte_graph_Base::ResetValues(), CByte_graph_Base::SetAxis(), CByte_graph_Base::SetMax(), CByte_graph_Base::SetMin(), and CByte_graph_Base::SetValues().

◆ m_set_State [2/4]

Uint4 CInt_graph_Base::m_set_State[1]

private

Definition at line 255 of file Int_graph_.hpp.

Referenced by CInt_graph_Base::CInt_graph_Base(), CInt_graph_Base::IsSetAxis(), CInt_graph_Base::IsSetMax(), CInt_graph_Base::IsSetMin(), CInt_graph_Base::IsSetValues(), CInt_graph_Base::ResetAxis(), CInt_graph_Base::ResetMax(), CInt_graph_Base::ResetMin(), CInt_graph_Base::ResetValues(), CInt_graph_Base::SetAxis(), CInt_graph_Base::SetMax(), CInt_graph_Base::SetMin(), and CInt_graph_Base::SetValues().

◆ m_set_State [3/4]

Uint4 CReal_graph_Base::m_set_State[1]

private

Definition at line 258 of file Real_graph_.hpp.

Referenced by CReal_graph_Base::CReal_graph_Base(), CReal_graph_Base::IsSetAxis(), CReal_graph_Base::IsSetMax(), CReal_graph_Base::IsSetMin(), CReal_graph_Base::IsSetValues(), CReal_graph_Base::ResetAxis(), CReal_graph_Base::ResetMax(), CReal_graph_Base::ResetMin(), CReal_graph_Base::ResetValues(), CReal_graph_Base::SetAxis(), CReal_graph_Base::SetMax(), CReal_graph_Base::SetMin(), and CReal_graph_Base::SetValues().

◆ m_set_State [4/4]

Uint4 CSeq_graph_Base::m_set_State[1]

private

Definition at line 693 of file Seq_graph_.hpp.

◆ m_Title

string CSeq_graph_Base::m_Title

private

Definition at line 694 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetTitle(), CSeq_graph_Base::ResetTitle(), and CSeq_graph_Base::SetTitle().

◆ m_Title_x

string CSeq_graph_Base::m_Title_x

private

Definition at line 697 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetTitle_x(), CSeq_graph_Base::ResetTitle_x(), and CSeq_graph_Base::SetTitle_x().

◆ m_Title_y

string CSeq_graph_Base::m_Title_y

private

Definition at line 698 of file Seq_graph_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSeq_graph_Base::GetTitle_y(), CSeq_graph_Base::ResetTitle_y(), and CSeq_graph_Base::SetTitle_y().

◆ m_Values [1/3]

vector< char > CByte_graph_Base::m_Values

private

Definition at line 260 of file Byte_graph_.hpp.

Referenced by CByte_graph_Base::GetValues(), CByte_graph_Base::ResetValues(), and CByte_graph_Base::SetValues().

◆ m_Values [2/3]

vector< int > CInt_graph_Base::m_Values

private

Definition at line 259 of file Int_graph_.hpp.

Referenced by CInt_graph_Base::GetValues(), CInt_graph_Base::ResetValues(), and CInt_graph_Base::SetValues().

◆ m_Values [3/3]

vector< double > CReal_graph_Base::m_Values

private

Definition at line 262 of file Real_graph_.hpp.

Referenced by CReal_graph_Base::GetValues(), CReal_graph_Base::ResetValues(), and CReal_graph_Base::SetValues().

◆ sm_SelectionNames

const char *const CSeq_graph_Base::C_Graph::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "real",
    "int",
    "byte"
}

Definition at line 268 of file Seq_graph_.hpp.

Classes

Typedefs

Enumerations

Functions

Variables

Detailed Description

Typedef Documentation

◆ TA

◆ TAxis [1/3]

◆ TAxis [2/3]

◆ TAxis [3/3]

◆ TB

◆ TByte

◆ TComment

◆ TComp

◆ TGraph

◆ TInt

◆ TLoc

◆ TMax [1/3]

◆ TMax [2/3]

◆ TMax [3/3]

◆ TmemberIndex [1/4]

◆ TmemberIndex [2/4]

◆ TmemberIndex [3/4]

◆ TmemberIndex [4/4]

◆ TMin [1/3]

◆ TMin [2/3]

◆ TMin [3/3]

◆ TNumval

◆ Tparent [1/8]

◆ Tparent [2/8]

◆ Tparent [3/8]

◆ Tparent [4/8]

◆ Tparent [5/8]

◆ Tparent [6/8]

◆ Tparent [7/8]

◆ Tparent [8/8]

◆ TReal

◆ TTitle

◆ TTitle_x

◆ TTitle_y

◆ TValues [1/3]

◆ TValues [2/3]

◆ TValues [3/3]

Enumeration Type Documentation

◆ E_Choice

◆ E_ChoiceStopper

◆ E_memberIndex [1/4]

◆ E_memberIndex [2/4]

◆ E_memberIndex [3/4]

◆ E_memberIndex [4/4]

Function Documentation

◆ C_Graph() [1/2]

◆ C_Graph() [2/2]

◆ CanGetA()

◆ CanGetAxis() [1/3]

◆ CanGetAxis() [2/3]

◆ CanGetAxis() [3/3]

◆ CanGetB()

◆ CanGetComment()

◆ CanGetComp()

◆ CanGetGraph()

◆ CanGetLoc()

◆ CanGetMax() [1/3]

◆ CanGetMax() [2/3]

◆ CanGetMax() [3/3]

◆ CanGetMin() [1/3]

◆ CanGetMin() [2/3]

◆ CanGetMin() [3/3]

◆ CanGetNumval()

◆ CanGetTitle()

◆ CanGetTitle_x()

◆ CanGetTitle_y()

◆ CanGetValues() [1/3]

◆ CanGetValues() [2/3]

◆ CanGetValues() [3/3]

◆ CByte_graph() [1/2]

◆ CByte_graph() [2/2]

◆ CByte_graph_Base() [1/2]

◆ CByte_graph_Base() [2/2]