Code generated by DATATOOL from 'varrep.asn' (module 'NCBI-VariationIRep')

Collaboration diagram for Code generated by DATATOOL from 'varrep.asn' (module 'NCBI-VariationIRep'):

Classes
class	CAaInterval_Base
	CAaInterval_Base –. More...
class	CAaLocation_Base
	CAaLocation_Base –. More...
class	CAaSite
	CAaSite –. More...
class	CAaSite_Base
	CAaSite_Base –. More...
class	CAaSiteRange
	CAaSiteRange –. More...
class	CAaSiteRange_Base
	CAaSiteRange_Base –. More...
class	CConversion
	CConversion –. More...
class	CConversion_Base
	CConversion_Base –. More...
class	CCount
	CCount –. More...
class	CCount_Base
	CCount_Base –. More...
class	CCount_Base::C_Range
	C_Range –. More...
class	CCount_Base::C_Range::C_Start
	C_Start –. More...
class	CCount_Base::C_Range::C_Stop
	C_Stop –. More...
class	CCtermExtension
	CCtermExtension –. More...
class	CCtermExtension_Base
	CCtermExtension_Base –. More...
class	CDeletion
	CDeletion –. More...
class	CDeletion_Base
	CDeletion_Base –. More...
class	CDelins
	CDelins –. More...
class	CDelins_Base
	CDelins_Base –. More...
class	CDelins_Base::C_Inserted_seq_info
	C_Inserted_seq_info –. More...
class	CDuplication
	CDuplication –. More...
class	CDuplication_Base
	CDuplication_Base –. More...
class	CFrameshift
	CFrameshift –. More...
class	CFrameshift_Base
	CFrameshift_Base –. More...
class	CInsertion
	CInsertion –. More...
class	CInsertion_Base
	CInsertion_Base –. More...
class	CInsertion_Base::C_Seqinfo
	C_Seqinfo –. More...
class	CInversion
	CInversion –. More...
class	CInversion_Base
	CInversion_Base –. More...
class	CNaIdentity
	CNaIdentity –. More...
class	CNaIdentity_Base
	CNaIdentity_Base –. More...
class	CNaSub
	CNaSub –. More...
class	CNaSub_Base
	CNaSub_Base –. More...
class	CNtermExtension
	CNtermExtension –. More...
class	CNtermExtension_Base
	CNtermExtension_Base –. More...
class	CNtInterval
	CNtInterval –. More...
class	CNtInterval_Base
	CNtInterval_Base –. More...
class	CNtIntLimit
	CNtIntLimit –. More...
class	CNtIntLimit_Base
	CNtIntLimit_Base –. More...
class	CNtLocation
	CNtLocation –. More...
class	CNtLocation_Base
	CNtLocation_Base –. More...
class	CNtSite
	CNtSite –. More...
class	CNtSite_Base
	CNtSite_Base –. More...
class	CNtSite_Base::C_Base
	C_Base –. More...
class	CNtSite_Base::C_Offset
	C_Offset –. More...
class	CNtSite_Base::C_Utr
	C_Utr –. More...
class	CNtSiteRange
	CNtSiteRange –. More...
class	CNtSiteRange_Base
	CNtSiteRange_Base –. More...
class	CProteinExtension
	CProteinExtension –. More...
class	CProteinExtension_Base
	CProteinExtension_Base –. More...
class	CProteinSub
	CProteinSub –. More...
class	CProteinSub_Base
	CProteinSub_Base –. More...
class	CRepeat
	CRepeat –. More...
class	CRepeat_Base
	CRepeat_Base –. More...
class	CSeqInterval
	CSeqInterval –. More...
class	CSeqInterval_Base
	CSeqInterval_Base –. More...
class	CSeqLocation
	CSeqLocation –. More...
class	CSeqLocation_Base
	CSeqLocation_Base –. More...
class	CSequenceVariant
	CSequenceVariant –. More...
class	CSequenceVariant_Base
	CSequenceVariant_Base –. More...
class	CSimpleVariant
	CSimpleVariant –. More...
class	CSimpleVariant_Base
	CSimpleVariant_Base –. More...
class	CSimpleVariant_Base::C_Type
	C_Type –. More...
class	CSimpleVariantSeq
	CSimpleVariantSeq –. More...
class	CSimpleVariantSeq_Base
	SimpleVarSeq is deprecated and should go. More...
class	CSubsequence
	CSubsequence –. More...
class	CSubsequence_Base
	CSubsequence_Base –. More...
class	CVariant
	CVariant –. More...
class	CVariant_Base
	CVariant_Base –. More...
class	CVariantExpression
	CVariantExpression –. More...
class	CVariantExpression_Base
	EXPORTS VariantExpression, SimpleVariant;. More...

Typedefs
typedef CSerialObject	CAaInterval_Base::Tparent
typedef CAaSite	CAaInterval_Base::TStart
typedef CAaSite	CAaInterval_Base::TStop
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CAaInterval_Base::TmemberIndex
typedef CSerialObject	CAaLocation_Base::Tparent
typedef CAaSite	CAaLocation_Base::TSite
typedef CAaSiteRange	CAaLocation_Base::TRange
typedef CAaInterval	CAaLocation_Base::TInt
typedef CAaSite_Base	CAaSite::Tparent
typedef CSerialObject	CAaSite_Base::Tparent
typedef TSeqPos	CAaSite_Base::TIndex
typedef string	CAaSite_Base::TAa
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CAaSite_Base::TmemberIndex
typedef CAaSiteRange_Base	CAaSiteRange::Tparent
typedef CSerialObject	CAaSiteRange_Base::Tparent
typedef CAaSite	CAaSiteRange_Base::TStart
typedef CAaSite	CAaSiteRange_Base::TStop
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CAaSiteRange_Base::TmemberIndex
typedef CConversion_Base	CConversion::Tparent
typedef CSerialObject	CConversion_Base::Tparent
typedef CNtLocation	CConversion_Base::TLoc
typedef CNtLocation	CConversion_Base::TOrigin
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CConversion_Base::TmemberIndex
typedef CCount_Base	CCount::Tparent
typedef CSerialObject	CCount_Base::Tparent
typedef CSerialObject	CCount_Base::C_Range::Tparent
typedef CSerialObject	CCount_Base::C_Range::C_Start::Tparent
typedef TSeqPos	CCount_Base::C_Range::C_Start::TVal
typedef CSerialObject	CCount_Base::C_Range::C_Stop::Tparent
typedef TSeqPos	CCount_Base::C_Range::C_Stop::TVal
typedef C_Start	CCount_Base::C_Range::TStart
typedef C_Stop	CCount_Base::C_Range::TStop
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CCount_Base::C_Range::TmemberIndex
typedef TSeqPos	CCount_Base::TVal
typedef TSeqPos	CCount_Base::TFuzzy_val
typedef C_Range	CCount_Base::TRange
typedef CCtermExtension_Base	CCtermExtension::Tparent
typedef CSerialObject	CCtermExtension_Base::Tparent
typedef int	CCtermExtension_Base::TRefStop
typedef string	CCtermExtension_Base::TNewAa
typedef CCount	CCtermExtension_Base::TLength
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CCtermExtension_Base::TmemberIndex
typedef CDeletion_Base	CDeletion::Tparent
typedef CSerialObject	CDeletion_Base::Tparent
typedef CSeqLocation	CDeletion_Base::TLoc
typedef string	CDeletion_Base::TRaw_seq
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CDeletion_Base::TmemberIndex
typedef CDelins_Base	CDelins::Tparent
typedef CSerialObject	CDelins_Base::Tparent
typedef CSerialObject	CDelins_Base::C_Inserted_seq_info::Tparent
typedef string	CDelins_Base::C_Inserted_seq_info::TIdentifier
typedef string	CDelins_Base::C_Inserted_seq_info::TRaw_seq
typedef CCount	CDelins_Base::C_Inserted_seq_info::TCount
typedef CSubsequence	CDelins_Base::C_Inserted_seq_info::TSubseq
typedef CSeqLocation	CDelins_Base::TLoc
typedef string	CDelins_Base::TDeleted_raw_seq
typedef C_Inserted_seq_info	CDelins_Base::TInserted_seq_info
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CDelins_Base::TmemberIndex
typedef CDuplication_Base	CDuplication::Tparent
typedef CSerialObject	CDuplication_Base::Tparent
typedef CSeqLocation	CDuplication_Base::TLoc
typedef string	CDuplication_Base::TRaw_seq
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CDuplication_Base::TmemberIndex
typedef CFrameshift_Base	CFrameshift::Tparent
typedef CSerialObject	CFrameshift_Base::Tparent
typedef CAaSite	CFrameshift_Base::TAasite
typedef CInsertion_Base	CInsertion::Tparent
typedef CSerialObject	CInsertion_Base::Tparent
typedef CSerialObject	CInsertion_Base::C_Seqinfo::Tparent
typedef string	CInsertion_Base::C_Seqinfo::TIdentifier
typedef string	CInsertion_Base::C_Seqinfo::TRaw_seq
typedef CCount	CInsertion_Base::C_Seqinfo::TCount
typedef CSubsequence	CInsertion_Base::C_Seqinfo::TSubseq
typedef CSeqInterval	CInsertion_Base::TInt
typedef C_Seqinfo	CInsertion_Base::TSeqinfo
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CInsertion_Base::TmemberIndex
typedef CInversion_Base	CInversion::Tparent
typedef CSerialObject	CInversion_Base::Tparent
typedef CNtInterval	CInversion_Base::TNtint
typedef string	CInversion_Base::TRaw_seq
typedef int	CInversion_Base::TSize
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CInversion_Base::TmemberIndex
typedef CNaIdentity_Base	CNaIdentity::Tparent
typedef CSerialObject	CNaIdentity_Base::Tparent
typedef CNtLocation	CNaIdentity_Base::TLoc
typedef string	CNaIdentity_Base::TNucleotide
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNaIdentity_Base::TmemberIndex
typedef CNaSub_Base	CNaSub::Tparent
typedef CSerialObject	CNaSub_Base::Tparent
typedef CNtLocation	CNaSub_Base::TLoc
typedef string	CNaSub_Base::TInitial
typedef string	CNaSub_Base::TFinal
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CNaSub_Base::TmemberIndex
typedef CNtermExtension_Base	CNtermExtension::Tparent
typedef CSerialObject	CNtermExtension_Base::Tparent
typedef CCount	CNtermExtension_Base::TNewStart
typedef string	CNtermExtension_Base::TNewAa
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNtermExtension_Base::TmemberIndex
typedef CNtInterval_Base	CNtInterval::Tparent
typedef CSerialObject	CNtInterval_Base::Tparent
typedef CNtIntLimit	CNtInterval_Base::TStart
typedef CNtIntLimit	CNtInterval_Base::TStop
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNtInterval_Base::TmemberIndex
typedef CNtIntLimit_Base	CNtIntLimit::Tparent
typedef CSerialObject	CNtIntLimit_Base::Tparent
typedef CNtSite	CNtIntLimit_Base::TSite
typedef CNtSiteRange	CNtIntLimit_Base::TRange
typedef CNtLocation_Base	CNtLocation::Tparent
typedef CSerialObject	CNtLocation_Base::Tparent
typedef CNtSite	CNtLocation_Base::TSite
typedef CNtSiteRange	CNtLocation_Base::TRange
typedef CNtInterval	CNtLocation_Base::TInt
typedef CNtSite_Base	CNtSite::Tparent
typedef CSerialObject	CNtSite_Base::Tparent
typedef CSerialObject	CNtSite_Base::C_Base::Tparent
typedef TSeqPos	CNtSite_Base::C_Base::TVal
typedef CSerialObject	CNtSite_Base::C_Offset::Tparent
typedef TSignedSeqPos	CNtSite_Base::C_Offset::TVal
typedef CSerialObject	CNtSite_Base::C_Utr::Tparent
typedef string	CNtSite_Base::TSeqid
typedef int	CNtSite_Base::TSeqtype
typedef C_Base	CNtSite_Base::TBase
typedef C_Offset	CNtSite_Base::TOffset
typedef C_Utr	CNtSite_Base::TUtr
typedef bool	CNtSite_Base::TStrand_minus
typedef bool	CNtSite_Base::TFuzzy
typedef bool	CNtSite_Base::TFuzzy_offset
typedef Tparent::CMemberIndex< E_memberIndex, 9 >	CNtSite_Base::TmemberIndex
typedef CNtSiteRange_Base	CNtSiteRange::Tparent
typedef CSerialObject	CNtSiteRange_Base::Tparent
typedef CNtSite	CNtSiteRange_Base::TStart
typedef CNtSite	CNtSiteRange_Base::TStop
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CNtSiteRange_Base::TmemberIndex
typedef CProteinExtension_Base	CProteinExtension::Tparent
typedef CSerialObject	CProteinExtension_Base::Tparent
typedef CNtermExtension	CProteinExtension_Base::TNterm_ext
typedef CCtermExtension	CProteinExtension_Base::TCterm_ext
typedef CProteinSub_Base	CProteinSub::Tparent
typedef CSerialObject	CProteinSub_Base::Tparent
typedef int	CProteinSub_Base::TType
typedef CAaSite	CProteinSub_Base::TInitial
typedef string	CProteinSub_Base::TFinal
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CProteinSub_Base::TmemberIndex
typedef CRepeat_Base	CRepeat::Tparent
typedef CSerialObject	CRepeat_Base::Tparent
typedef CSeqLocation	CRepeat_Base::TLoc
typedef CCount	CRepeat_Base::TCount
typedef string	CRepeat_Base::TRaw_seq
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CRepeat_Base::TmemberIndex
typedef CSeqInterval_Base	CSeqInterval::Tparent
typedef CSerialObject	CSeqInterval_Base::Tparent
typedef CAaInterval	CSeqInterval_Base::TAaint
typedef CNtInterval	CSeqInterval_Base::TNtint
typedef CSeqLocation_Base	CSeqLocation::Tparent
typedef CSerialObject	CSeqLocation_Base::Tparent
typedef CAaLocation	CSeqLocation_Base::TAaloc
typedef CNtLocation	CSeqLocation_Base::TNtloc
typedef CSequenceVariant_Base	CSequenceVariant::Tparent
typedef CSerialObject	CSequenceVariant_Base::Tparent
typedef int	CSequenceVariant_Base::TSeqtype
typedef list< CRef< CVariant > >	CSequenceVariant_Base::TSubvariants
typedef int	CSequenceVariant_Base::TComplex
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CSequenceVariant_Base::TmemberIndex
typedef CSimpleVariant_Base	CSimpleVariant::Tparent
typedef CSerialObject	CSimpleVariant_Base::Tparent
typedef CSerialObject	CSimpleVariant_Base::C_Type::Tparent
typedef CNaIdentity	CSimpleVariant_Base::C_Type::TNa_identity
typedef CNaSub	CSimpleVariant_Base::C_Type::TNa_sub
typedef CProteinSub	CSimpleVariant_Base::C_Type::TProt_sub
typedef CAaLocation	CSimpleVariant_Base::C_Type::TProt_silent
typedef CDeletion	CSimpleVariant_Base::C_Type::TDel
typedef CDuplication	CSimpleVariant_Base::C_Type::TDup
typedef CInversion	CSimpleVariant_Base::C_Type::TInv
typedef CInsertion	CSimpleVariant_Base::C_Type::TIns
typedef CConversion	CSimpleVariant_Base::C_Type::TConv
typedef CDelins	CSimpleVariant_Base::C_Type::TDelins
typedef CRepeat	CSimpleVariant_Base::C_Type::TRepeat
typedef CProteinExtension	CSimpleVariant_Base::C_Type::TProt_ext
typedef CFrameshift	CSimpleVariant_Base::C_Type::TFrameshift
typedef C_Type	CSimpleVariant_Base::TType
typedef bool	CSimpleVariant_Base::TFuzzy
typedef Tparent::CMemberIndex< E_memberIndex, 3 >	CSimpleVariant_Base::TmemberIndex
typedef CSimpleVariantSeq_Base	CSimpleVariantSeq::Tparent
typedef CSerialObject	CSimpleVariantSeq_Base::Tparent
typedef list< CRef< CSimpleVariant > >	CSimpleVariantSeq_Base::TVariants
typedef bool	CSimpleVariantSeq_Base::TSisters
typedef bool	CSimpleVariantSeq_Base::TFuzzy
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CSimpleVariantSeq_Base::TmemberIndex
typedef CSubsequence_Base	CSubsequence::Tparent
typedef CSerialObject	CSubsequence_Base::Tparent
typedef string	CSubsequence_Base::TIdentifier
typedef int	CSubsequence_Base::TType
typedef CSeqInterval	CSubsequence_Base::TInt
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CSubsequence_Base::TmemberIndex
typedef CVariant_Base	CVariant::Tparent
typedef CSerialObject	CVariant_Base::Tparent
typedef CSimpleVariant	CVariant_Base::TSimple
typedef int	CVariant_Base::TSpecial
typedef CVariantExpression_Base	CVariantExpression::Tparent
typedef CSerialObject	CVariantExpression_Base::Tparent
typedef string	CVariantExpression_Base::TInput_expr
typedef string	CVariantExpression_Base::TReference_id
typedef CSequenceVariant	CVariantExpression_Base::TSequence_variant
typedef Tparent::CMemberIndex< E_memberIndex, 4 >	CVariantExpression_Base::TmemberIndex

Enumerations
enum class	CAaInterval_Base::E_memberIndex { CAaInterval_Base::e__allMandatory = 0 , CAaInterval_Base::e_start , CAaInterval_Base::e_stop }
enum	CAaLocation_Base::E_Choice { CAaLocation_Base::e_not_set = 0 , CAaLocation_Base::e_Site , CAaLocation_Base::e_Range , CAaLocation_Base::e_Int }
	Choice variants. More...
enum	CAaLocation_Base::E_ChoiceStopper { CAaLocation_Base::e_MaxChoice = 4 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CAaSite_Base::E_memberIndex { CAaSite_Base::e__allMandatory = 0 , CAaSite_Base::e_index , CAaSite_Base::e_aa }
enum class	CAaSiteRange_Base::E_memberIndex { CAaSiteRange_Base::e__allMandatory = 0 , CAaSiteRange_Base::e_start , CAaSiteRange_Base::e_stop }
enum class	CConversion_Base::E_memberIndex { CConversion_Base::e__allMandatory = 0 , CConversion_Base::e_loc , CConversion_Base::e_origin }
enum	CCount_Base::C_Range::C_Start::E_Choice { CCount_Base::C_Range::C_Start::e_not_set = 0 , CCount_Base::C_Range::C_Start::e_Val , CCount_Base::C_Range::C_Start::e_Unknown }
	Choice variants. More...
enum	CCount_Base::C_Range::C_Start::E_ChoiceStopper { CCount_Base::C_Range::C_Start::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CCount_Base::C_Range::C_Stop::E_Choice { CCount_Base::C_Range::C_Stop::e_not_set = 0 , CCount_Base::C_Range::C_Stop::e_Val , CCount_Base::C_Range::C_Stop::e_Unknown }
	Choice variants. More...
enum	CCount_Base::C_Range::C_Stop::E_ChoiceStopper { CCount_Base::C_Range::C_Stop::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CCount_Base::C_Range::E_memberIndex { CCount_Base::C_Range::e__allMandatory = 0 , CCount_Base::C_Range::e_start , CCount_Base::C_Range::e_stop }
enum	CCount_Base::E_Choice {   CCount_Base::e_not_set = 0 , CCount_Base::e_Unknown , CCount_Base::e_Val , CCount_Base::e_Fuzzy_val ,   CCount_Base::e_Range }
	Choice variants. More...
enum	CCount_Base::E_ChoiceStopper { CCount_Base::e_MaxChoice = 5 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CCtermExtension_Base::E_memberIndex { CCtermExtension_Base::e__allMandatory = 0 , CCtermExtension_Base::e_refStop , CCtermExtension_Base::e_newAa , CCtermExtension_Base::e_length }
enum class	CDeletion_Base::E_memberIndex { CDeletion_Base::e__allMandatory = 0 , CDeletion_Base::e_loc , CDeletion_Base::e_raw_seq }
enum	CDelins_Base::C_Inserted_seq_info::E_Choice {   CDelins_Base::C_Inserted_seq_info::e_not_set = 0 , CDelins_Base::C_Inserted_seq_info::e_Identifier , CDelins_Base::C_Inserted_seq_info::e_Raw_seq , CDelins_Base::C_Inserted_seq_info::e_Count ,   CDelins_Base::C_Inserted_seq_info::e_Subseq }
	Choice variants. More...
enum	CDelins_Base::C_Inserted_seq_info::E_ChoiceStopper { CDelins_Base::C_Inserted_seq_info::e_MaxChoice = 5 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CDelins_Base::E_memberIndex { CDelins_Base::e__allMandatory = 0 , CDelins_Base::e_loc , CDelins_Base::e_deleted_raw_seq , CDelins_Base::e_inserted_seq_info }
enum class	CDuplication_Base::E_memberIndex { CDuplication_Base::e__allMandatory = 0 , CDuplication_Base::e_loc , CDuplication_Base::e_raw_seq }
enum	CFrameshift_Base::E_Choice { CFrameshift_Base::e_not_set = 0 , CFrameshift_Base::e_Aasite , CFrameshift_Base::e_Stopcodon }
	Choice variants. More...
enum	CFrameshift_Base::E_ChoiceStopper { CFrameshift_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CInsertion_Base::C_Seqinfo::E_Choice {   CInsertion_Base::C_Seqinfo::e_not_set = 0 , CInsertion_Base::C_Seqinfo::e_Identifier , CInsertion_Base::C_Seqinfo::e_Raw_seq , CInsertion_Base::C_Seqinfo::e_Count ,   CInsertion_Base::C_Seqinfo::e_Subseq }
	Choice variants. More...
enum	CInsertion_Base::C_Seqinfo::E_ChoiceStopper { CInsertion_Base::C_Seqinfo::e_MaxChoice = 5 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CInsertion_Base::E_memberIndex { CInsertion_Base::e__allMandatory = 0 , CInsertion_Base::e_int , CInsertion_Base::e_seqinfo }
enum class	CInversion_Base::E_memberIndex { CInversion_Base::e__allMandatory = 0 , CInversion_Base::e_ntint , CInversion_Base::e_raw_seq , CInversion_Base::e_size }
enum class	CNaIdentity_Base::E_memberIndex { CNaIdentity_Base::e__allMandatory = 0 , CNaIdentity_Base::e_loc , CNaIdentity_Base::e_nucleotide }
enum class	CNaSub_Base::E_memberIndex { CNaSub_Base::e__allMandatory = 0 , CNaSub_Base::e_loc , CNaSub_Base::e_initial , CNaSub_Base::e_final }
enum class	CNtermExtension_Base::E_memberIndex { CNtermExtension_Base::e__allMandatory = 0 , CNtermExtension_Base::e_newStart , CNtermExtension_Base::e_newAa }
enum class	CNtInterval_Base::E_memberIndex { CNtInterval_Base::e__allMandatory = 0 , CNtInterval_Base::e_start , CNtInterval_Base::e_stop }
enum	CNtIntLimit_Base::E_Choice { CNtIntLimit_Base::e_not_set = 0 , CNtIntLimit_Base::e_Site , CNtIntLimit_Base::e_Range }
	Choice variants. More...
enum	CNtIntLimit_Base::E_ChoiceStopper { CNtIntLimit_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CNtLocation_Base::E_Choice { CNtLocation_Base::e_not_set = 0 , CNtLocation_Base::e_Site , CNtLocation_Base::e_Range , CNtLocation_Base::e_Int }
	Choice variants. More...
enum	CNtLocation_Base::E_ChoiceStopper { CNtLocation_Base::e_MaxChoice = 4 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CNtSite_Base::C_Base::E_Choice { CNtSite_Base::C_Base::e_not_set = 0 , CNtSite_Base::C_Base::e_Val , CNtSite_Base::C_Base::e_Unknown }
	Choice variants. More...
enum	CNtSite_Base::C_Base::E_ChoiceStopper { CNtSite_Base::C_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CNtSite_Base::C_Offset::E_Choice { CNtSite_Base::C_Offset::e_not_set = 0 , CNtSite_Base::C_Offset::e_Val , CNtSite_Base::C_Offset::e_Plus_unknown , CNtSite_Base::C_Offset::e_Minus_unknown }
	Choice variants. More...
enum	CNtSite_Base::C_Offset::E_ChoiceStopper { CNtSite_Base::C_Offset::e_MaxChoice = 4 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CNtSite_Base::C_Utr::E_Choice { CNtSite_Base::C_Utr::e_not_set = 0 , CNtSite_Base::C_Utr::e_Five_prime , CNtSite_Base::C_Utr::e_Three_prime }
	Choice variants. More...
enum	CNtSite_Base::C_Utr::E_ChoiceStopper { CNtSite_Base::C_Utr::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CNtSite_Base::E_memberIndex {   CNtSite_Base::e__allMandatory = 0 , CNtSite_Base::e_seqid , CNtSite_Base::e_seqtype , CNtSite_Base::e_base ,   CNtSite_Base::e_offset , CNtSite_Base::e_utr , CNtSite_Base::e_strand_minus , CNtSite_Base::e_fuzzy ,   CNtSite_Base::e_fuzzy_offset }
enum class	CNtSiteRange_Base::E_memberIndex { CNtSiteRange_Base::e__allMandatory = 0 , CNtSiteRange_Base::e_start , CNtSiteRange_Base::e_stop }
enum	CProteinExtension_Base::E_Choice { CProteinExtension_Base::e_not_set = 0 , CProteinExtension_Base::e_Nterm_ext , CProteinExtension_Base::e_Cterm_ext }
	Choice variants. More...
enum	CProteinExtension_Base::E_ChoiceStopper { CProteinExtension_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CProteinSub_Base::EType { CProteinSub_Base::eType_missense = 0 , CProteinSub_Base::eType_nonsense = 1 , CProteinSub_Base::eType_unknown = 2 }
enum class	CProteinSub_Base::E_memberIndex { CProteinSub_Base::e__allMandatory = 0 , CProteinSub_Base::e_type , CProteinSub_Base::e_initial , CProteinSub_Base::e_final }
enum class	CRepeat_Base::E_memberIndex { CRepeat_Base::e__allMandatory = 0 , CRepeat_Base::e_loc , CRepeat_Base::e_count , CRepeat_Base::e_raw_seq }
enum	CSeqInterval_Base::E_Choice { CSeqInterval_Base::e_not_set = 0 , CSeqInterval_Base::e_Aaint , CSeqInterval_Base::e_Ntint }
	Choice variants. More...
enum	CSeqInterval_Base::E_ChoiceStopper { CSeqInterval_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CSeqLocation_Base::E_Choice { CSeqLocation_Base::e_not_set = 0 , CSeqLocation_Base::e_Aaloc , CSeqLocation_Base::e_Ntloc }
	Choice variants. More...
enum	CSeqLocation_Base::E_ChoiceStopper { CSeqLocation_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum	CSequenceVariant_Base::EComplex { CSequenceVariant_Base::eComplex_mosaic = 1 , CSequenceVariant_Base::eComplex_chimera = 2 }
enum class	CSequenceVariant_Base::E_memberIndex { CSequenceVariant_Base::e__allMandatory = 0 , CSequenceVariant_Base::e_seqtype , CSequenceVariant_Base::e_subvariants , CSequenceVariant_Base::e_complex }
enum	CSimpleVariant_Base::C_Type::E_Choice {   CSimpleVariant_Base::C_Type::e_not_set = 0 , CSimpleVariant_Base::C_Type::e_Na_identity , CSimpleVariant_Base::C_Type::e_Na_sub , CSimpleVariant_Base::C_Type::e_Prot_sub ,   CSimpleVariant_Base::C_Type::e_Prot_silent , CSimpleVariant_Base::C_Type::e_Del , CSimpleVariant_Base::C_Type::e_Dup , CSimpleVariant_Base::C_Type::e_Inv ,   CSimpleVariant_Base::C_Type::e_Ins , CSimpleVariant_Base::C_Type::e_Conv , CSimpleVariant_Base::C_Type::e_Delins , CSimpleVariant_Base::C_Type::e_Repeat ,   CSimpleVariant_Base::C_Type::e_Prot_ext , CSimpleVariant_Base::C_Type::e_Frameshift }
	Choice variants. More...
enum	CSimpleVariant_Base::C_Type::E_ChoiceStopper { CSimpleVariant_Base::C_Type::e_MaxChoice = 14 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CSimpleVariant_Base::E_memberIndex { CSimpleVariant_Base::e__allMandatory = 0 , CSimpleVariant_Base::e_type , CSimpleVariant_Base::e_fuzzy }
enum class	CSimpleVariantSeq_Base::E_memberIndex { CSimpleVariantSeq_Base::e__allMandatory = 0 , CSimpleVariantSeq_Base::e_variants , CSimpleVariantSeq_Base::e_sisters , CSimpleVariantSeq_Base::e_fuzzy }
enum	ESpecialVariant {   eSpecialVariant_unknown = 0 , eSpecialVariant_not_analyzed = 1 , eSpecialVariant_nochange = 2 , eSpecialVariant_nochange_expected = 3 ,   eSpecialVariant_noseq = 4 , eSpecialVariant_noseq_expected = 5 , eSpecialVariant_splice_expected = 6 , eSpecialVariant_splice_possible = 7 }
	Access to ESpecialVariant's attributes (values, names) as defined in spec. More...
enum class	CSubsequence_Base::E_memberIndex { CSubsequence_Base::e__allMandatory = 0 , CSubsequence_Base::e_identifier , CSubsequence_Base::e_type , CSubsequence_Base::e_int }
enum	CVariant_Base::E_Choice { CVariant_Base::e_not_set = 0 , CVariant_Base::e_Simple , CVariant_Base::e_Special }
	Choice variants. More...
enum	CVariant_Base::E_ChoiceStopper { CVariant_Base::e_MaxChoice = 3 }
	Maximum+1 value of the choice variant enumerator. More...
enum class	CVariantExpression_Base::E_memberIndex { CVariantExpression_Base::e__allMandatory = 0 , CVariantExpression_Base::e_input_expr , CVariantExpression_Base::e_reference_id , CVariantExpression_Base::e_sequence_variant }
enum	EVariantSeqType {   eVariantSeqType_g = 0 , eVariantSeqType_m = 1 , eVariantSeqType_c = 2 , eVariantSeqType_r = 3 ,   eVariantSeqType_n = 4 , eVariantSeqType_p = 5 , eVariantSeqType_u = 6 }
	Access to EVariantSeqType's attributes (values, names) as defined in spec. More...

Functions
	CAaInterval_Base::CAaInterval_Base (void)
virtual	CAaInterval_Base::~CAaInterval_Base (void)
	CAaInterval_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CAaInterval_Base::IsSetStart (void) const
	Check if a value has been assigned to Start data member. More...
bool	CAaInterval_Base::CanGetStart (void) const
	Check if it is safe to call GetStart method. More...
void	CAaInterval_Base::ResetStart (void)
	Reset Start data member. More...
const TStart &	CAaInterval_Base::GetStart (void) const
	Get the Start member data. More...
void	CAaInterval_Base::SetStart (TStart &value)
	Assign a value to Start data member. More...
TStart &	CAaInterval_Base::SetStart (void)
	Assign a value to Start data member. More...
bool	CAaInterval_Base::IsSetStop (void) const
	Check if a value has been assigned to Stop data member. More...
bool	CAaInterval_Base::CanGetStop (void) const
	Check if it is safe to call GetStop method. More...
void	CAaInterval_Base::ResetStop (void)
	Reset Stop data member. More...
const TStop &	CAaInterval_Base::GetStop (void) const
	Get the Stop member data. More...
void	CAaInterval_Base::SetStop (TStop &value)
	Assign a value to Stop data member. More...
TStop &	CAaInterval_Base::SetStop (void)
	Assign a value to Stop data member. More...
virtual void	CAaInterval_Base::Reset (void)
	Reset the whole object. More...
	CAaInterval_Base::CAaInterval_Base (const CAaInterval_Base &)
CAaInterval_Base &	CAaInterval_Base::operator= (const CAaInterval_Base &)
	CAaLocation_Base::CAaLocation_Base (void)
virtual	CAaLocation_Base::~CAaLocation_Base (void)
	CAaLocation_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CAaLocation_Base::Reset (void)
	Reset the whole object. More...
virtual void	CAaLocation_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CAaLocation_Base::Which (void) const
	Which variant is currently selected. More...
void	CAaLocation_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CAaLocation_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CAaLocation_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CAaLocation_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CAaLocation_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CAaLocation_Base::IsSite (void) const
	Check if variant Site is selected. More...
const TSite &	CAaLocation_Base::GetSite (void) const
	Get the variant data. More...
TSite &	CAaLocation_Base::SetSite (void)
	Select the variant. More...
void	CAaLocation_Base::SetSite (TSite &value)
	Select the variant and set its data. More...
bool	CAaLocation_Base::IsRange (void) const
	Check if variant Range is selected. More...
const TRange &	CAaLocation_Base::GetRange (void) const
	Get the variant data. More...
TRange &	CAaLocation_Base::SetRange (void)
	Select the variant. More...
void	CAaLocation_Base::SetRange (TRange &value)
	Select the variant and set its data. More...
bool	CAaLocation_Base::IsInt (void) const
	Check if variant Int is selected. More...
const TInt &	CAaLocation_Base::GetInt (void) const
	Get the variant data. More...
TInt &	CAaLocation_Base::SetInt (void)
	Select the variant. More...
void	CAaLocation_Base::SetInt (TInt &value)
	Select the variant and set its data. More...
	CAaLocation_Base::CAaLocation_Base (const CAaLocation_Base &)
CAaLocation_Base &	CAaLocation_Base::operator= (const CAaLocation_Base &)
void	CAaLocation_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CAaSite::CAaSite (void)
	CAaSite::~CAaSite (void)
	CAaSite::CAaSite (const CAaSite &value)
CAaSite &	CAaSite::operator= (const CAaSite &value)
	CAaSite_Base::CAaSite_Base (void)
virtual	CAaSite_Base::~CAaSite_Base (void)
	CAaSite_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CAaSite_Base::IsSetIndex (void) const
	Check if a value has been assigned to Index data member. More...
bool	CAaSite_Base::CanGetIndex (void) const
	Check if it is safe to call GetIndex method. More...
void	CAaSite_Base::ResetIndex (void)
	Reset Index data member. More...
TIndex	CAaSite_Base::GetIndex (void) const
	Get the Index member data. More...
void	CAaSite_Base::SetIndex (TIndex value)
	Assign a value to Index data member. More...
TIndex &	CAaSite_Base::SetIndex (void)
	Assign a value to Index data member. More...
bool	CAaSite_Base::IsSetAa (void) const
	Check if a value has been assigned to Aa data member. More...
bool	CAaSite_Base::CanGetAa (void) const
	Check if it is safe to call GetAa method. More...
void	CAaSite_Base::ResetAa (void)
	Reset Aa data member. More...
const TAa &	CAaSite_Base::GetAa (void) const
	Get the Aa member data. More...
void	CAaSite_Base::SetAa (const TAa &value)
	Assign a value to Aa data member. More...
void	CAaSite_Base::SetAa (TAa &&value)
TAa &	CAaSite_Base::SetAa (void)
	Assign a value to Aa data member. More...
virtual void	CAaSite_Base::Reset (void)
	Reset the whole object. More...
	CAaSite_Base::CAaSite_Base (const CAaSite_Base &)
CAaSite_Base &	CAaSite_Base::operator= (const CAaSite_Base &)
	CAaSiteRange::CAaSiteRange (void)
	CAaSiteRange::~CAaSiteRange (void)
	CAaSiteRange::CAaSiteRange (const CAaSiteRange &value)
CAaSiteRange &	CAaSiteRange::operator= (const CAaSiteRange &value)
	CAaSiteRange_Base::CAaSiteRange_Base (void)
virtual	CAaSiteRange_Base::~CAaSiteRange_Base (void)
	CAaSiteRange_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CAaSiteRange_Base::IsSetStart (void) const
	Check if a value has been assigned to Start data member. More...
bool	CAaSiteRange_Base::CanGetStart (void) const
	Check if it is safe to call GetStart method. More...
void	CAaSiteRange_Base::ResetStart (void)
	Reset Start data member. More...
const TStart &	CAaSiteRange_Base::GetStart (void) const
	Get the Start member data. More...
void	CAaSiteRange_Base::SetStart (TStart &value)
	Assign a value to Start data member. More...
TStart &	CAaSiteRange_Base::SetStart (void)
	Assign a value to Start data member. More...
bool	CAaSiteRange_Base::IsSetStop (void) const
	Check if a value has been assigned to Stop data member. More...
bool	CAaSiteRange_Base::CanGetStop (void) const
	Check if it is safe to call GetStop method. More...
void	CAaSiteRange_Base::ResetStop (void)
	Reset Stop data member. More...
const TStop &	CAaSiteRange_Base::GetStop (void) const
	Get the Stop member data. More...
void	CAaSiteRange_Base::SetStop (TStop &value)
	Assign a value to Stop data member. More...
TStop &	CAaSiteRange_Base::SetStop (void)
	Assign a value to Stop data member. More...
virtual void	CAaSiteRange_Base::Reset (void)
	Reset the whole object. More...
	CAaSiteRange_Base::CAaSiteRange_Base (const CAaSiteRange_Base &)
CAaSiteRange_Base &	CAaSiteRange_Base::operator= (const CAaSiteRange_Base &)
	CConversion::CConversion (void)
	CConversion::~CConversion (void)
	CConversion::CConversion (const CConversion &value)
CConversion &	CConversion::operator= (const CConversion &value)
	CConversion_Base::CConversion_Base (void)
virtual	CConversion_Base::~CConversion_Base (void)
	CConversion_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CConversion_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CConversion_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CConversion_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CConversion_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CConversion_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CConversion_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CConversion_Base::IsSetOrigin (void) const
	Check if a value has been assigned to Origin data member. More...
bool	CConversion_Base::CanGetOrigin (void) const
	Check if it is safe to call GetOrigin method. More...
void	CConversion_Base::ResetOrigin (void)
	Reset Origin data member. More...
const TOrigin &	CConversion_Base::GetOrigin (void) const
	Get the Origin member data. More...
void	CConversion_Base::SetOrigin (TOrigin &value)
	Assign a value to Origin data member. More...
TOrigin &	CConversion_Base::SetOrigin (void)
	Assign a value to Origin data member. More...
virtual void	CConversion_Base::Reset (void)
	Reset the whole object. More...
	CConversion_Base::CConversion_Base (const CConversion_Base &)
CConversion_Base &	CConversion_Base::operator= (const CConversion_Base &)
	CCount::CCount (void)
	CCount::~CCount (void)
	CCount::CCount (const CCount &value)
CCount &	CCount::operator= (const CCount &value)
	CCount_Base::CCount_Base (void)
virtual	CCount_Base::~CCount_Base (void)
	CCount_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CCount_Base::C_Range::C_Range (void)
	CCount_Base::C_Range::~C_Range (void)
	CCount_Base::C_Range::DECLARE_INTERNAL_TYPE_INFO ()
	CCount_Base::C_Range::C_Start::C_Start (void)
	CCount_Base::C_Range::C_Start::~C_Start (void)
	CCount_Base::C_Range::C_Start::DECLARE_INTERNAL_TYPE_INFO ()
void	CCount_Base::C_Range::C_Start::Reset (void)
	Reset the whole object. More...
void	CCount_Base::C_Range::C_Start::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCount_Base::C_Range::C_Start::Which (void) const
	Which variant is currently selected. More...
void	CCount_Base::C_Range::C_Start::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCount_Base::C_Range::C_Start::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCount_Base::C_Range::C_Start::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCount_Base::C_Range::C_Start::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCount_Base::C_Range::C_Start::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCount_Base::C_Range::C_Start::IsVal (void) const
	Check if variant Val is selected. More...
TVal	CCount_Base::C_Range::C_Start::GetVal (void) const
	Get the variant data. More...
TVal &	CCount_Base::C_Range::C_Start::SetVal (void)
	Select the variant. More...
void	CCount_Base::C_Range::C_Start::SetVal (TVal value)
	Select the variant and set its data. More...
bool	CCount_Base::C_Range::C_Start::IsUnknown (void) const
	Check if variant Unknown is selected. More...
void	CCount_Base::C_Range::C_Start::SetUnknown (void)
	Select the variant. More...
	CCount_Base::C_Range::C_Start::C_Start (const C_Start &)
C_Start &	CCount_Base::C_Range::C_Start::operator= (const C_Start &)
void	CCount_Base::C_Range::C_Start::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CCount_Base::C_Range::C_Stop::C_Stop (void)
	CCount_Base::C_Range::C_Stop::~C_Stop (void)
	CCount_Base::C_Range::C_Stop::DECLARE_INTERNAL_TYPE_INFO ()
void	CCount_Base::C_Range::C_Stop::Reset (void)
	Reset the whole object. More...
void	CCount_Base::C_Range::C_Stop::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCount_Base::C_Range::C_Stop::Which (void) const
	Which variant is currently selected. More...
void	CCount_Base::C_Range::C_Stop::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCount_Base::C_Range::C_Stop::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCount_Base::C_Range::C_Stop::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCount_Base::C_Range::C_Stop::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCount_Base::C_Range::C_Stop::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCount_Base::C_Range::C_Stop::IsVal (void) const
	Check if variant Val is selected. More...
TVal	CCount_Base::C_Range::C_Stop::GetVal (void) const
	Get the variant data. More...
TVal &	CCount_Base::C_Range::C_Stop::SetVal (void)
	Select the variant. More...
void	CCount_Base::C_Range::C_Stop::SetVal (TVal value)
	Select the variant and set its data. More...
bool	CCount_Base::C_Range::C_Stop::IsUnknown (void) const
	Check if variant Unknown is selected. More...
void	CCount_Base::C_Range::C_Stop::SetUnknown (void)
	Select the variant. More...
	CCount_Base::C_Range::C_Stop::C_Stop (const C_Stop &)
C_Stop &	CCount_Base::C_Range::C_Stop::operator= (const C_Stop &)
void	CCount_Base::C_Range::C_Stop::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CCount_Base::C_Range::IsSetStart (void) const
	Check if a value has been assigned to Start data member. More...
bool	CCount_Base::C_Range::CanGetStart (void) const
	Check if it is safe to call GetStart method. More...
void	CCount_Base::C_Range::ResetStart (void)
	Reset Start data member. More...
const TStart &	CCount_Base::C_Range::GetStart (void) const
	Get the Start member data. More...
void	CCount_Base::C_Range::SetStart (TStart &value)
	Assign a value to Start data member. More...
TStart &	CCount_Base::C_Range::SetStart (void)
	Assign a value to Start data member. More...
bool	CCount_Base::C_Range::IsSetStop (void) const
	Check if a value has been assigned to Stop data member. More...
bool	CCount_Base::C_Range::CanGetStop (void) const
	Check if it is safe to call GetStop method. More...
void	CCount_Base::C_Range::ResetStop (void)
	Reset Stop data member. More...
const TStop &	CCount_Base::C_Range::GetStop (void) const
	Get the Stop member data. More...
void	CCount_Base::C_Range::SetStop (TStop &value)
	Assign a value to Stop data member. More...
TStop &	CCount_Base::C_Range::SetStop (void)
	Assign a value to Stop data member. More...
void	CCount_Base::C_Range::Reset (void)
	Reset the whole object. More...
	CCount_Base::C_Range::C_Range (const C_Range &)
C_Range &	CCount_Base::C_Range::operator= (const C_Range &)
virtual void	CCount_Base::Reset (void)
	Reset the whole object. More...
virtual void	CCount_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CCount_Base::Which (void) const
	Which variant is currently selected. More...
void	CCount_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CCount_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CCount_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CCount_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CCount_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CCount_Base::IsUnknown (void) const
	Check if variant Unknown is selected. More...
void	CCount_Base::SetUnknown (void)
	Select the variant. More...
bool	CCount_Base::IsVal (void) const
	Check if variant Val is selected. More...
TVal	CCount_Base::GetVal (void) const
	Get the variant data. More...
TVal &	CCount_Base::SetVal (void)
	Select the variant. More...
void	CCount_Base::SetVal (TVal value)
	Select the variant and set its data. More...
bool	CCount_Base::IsFuzzy_val (void) const
	Check if variant Fuzzy_val is selected. More...
TFuzzy_val	CCount_Base::GetFuzzy_val (void) const
	Get the variant data. More...
TFuzzy_val &	CCount_Base::SetFuzzy_val (void)
	Select the variant. More...
void	CCount_Base::SetFuzzy_val (TFuzzy_val value)
	Select the variant and set its data. More...
bool	CCount_Base::IsRange (void) const
	Check if variant Range is selected. More...
const TRange &	CCount_Base::GetRange (void) const
	Get the variant data. More...
TRange &	CCount_Base::SetRange (void)
	Select the variant. More...
void	CCount_Base::SetRange (TRange &value)
	Select the variant and set its data. More...
	CCount_Base::CCount_Base (const CCount_Base &)
CCount_Base &	CCount_Base::operator= (const CCount_Base &)
void	CCount_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CCtermExtension::CCtermExtension (void)
	CCtermExtension::~CCtermExtension (void)
	CCtermExtension::CCtermExtension (const CCtermExtension &value)
CCtermExtension &	CCtermExtension::operator= (const CCtermExtension &value)
	CCtermExtension_Base::CCtermExtension_Base (void)
virtual	CCtermExtension_Base::~CCtermExtension_Base (void)
	CCtermExtension_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CCtermExtension_Base::IsSetRefStop (void) const
	Check if a value has been assigned to RefStop data member. More...
bool	CCtermExtension_Base::CanGetRefStop (void) const
	Check if it is safe to call GetRefStop method. More...
void	CCtermExtension_Base::ResetRefStop (void)
	Reset RefStop data member. More...
TRefStop	CCtermExtension_Base::GetRefStop (void) const
	Get the RefStop member data. More...
void	CCtermExtension_Base::SetRefStop (TRefStop value)
	Assign a value to RefStop data member. More...
TRefStop &	CCtermExtension_Base::SetRefStop (void)
	Assign a value to RefStop data member. More...
bool	CCtermExtension_Base::IsSetNewAa (void) const
	Check if a value has been assigned to NewAa data member. More...
bool	CCtermExtension_Base::CanGetNewAa (void) const
	Check if it is safe to call GetNewAa method. More...
void	CCtermExtension_Base::ResetNewAa (void)
	Reset NewAa data member. More...
const TNewAa &	CCtermExtension_Base::GetNewAa (void) const
	Get the NewAa member data. More...
void	CCtermExtension_Base::SetNewAa (const TNewAa &value)
	Assign a value to NewAa data member. More...
void	CCtermExtension_Base::SetNewAa (TNewAa &&value)
TNewAa &	CCtermExtension_Base::SetNewAa (void)
	Assign a value to NewAa data member. More...
bool	CCtermExtension_Base::IsSetLength (void) const
	Check if a value has been assigned to Length data member. More...
bool	CCtermExtension_Base::CanGetLength (void) const
	Check if it is safe to call GetLength method. More...
void	CCtermExtension_Base::ResetLength (void)
	Reset Length data member. More...
const TLength &	CCtermExtension_Base::GetLength (void) const
	Get the Length member data. More...
void	CCtermExtension_Base::SetLength (TLength &value)
	Assign a value to Length data member. More...
TLength &	CCtermExtension_Base::SetLength (void)
	Assign a value to Length data member. More...
virtual void	CCtermExtension_Base::Reset (void)
	Reset the whole object. More...
	CCtermExtension_Base::CCtermExtension_Base (const CCtermExtension_Base &)
CCtermExtension_Base &	CCtermExtension_Base::operator= (const CCtermExtension_Base &)
	CDeletion::CDeletion (void)
	CDeletion::~CDeletion (void)
	CDeletion::CDeletion (const CDeletion &value)
CDeletion &	CDeletion::operator= (const CDeletion &value)
	CDeletion_Base::CDeletion_Base (void)
virtual	CDeletion_Base::~CDeletion_Base (void)
	CDeletion_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CDeletion_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CDeletion_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CDeletion_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CDeletion_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CDeletion_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CDeletion_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CDeletion_Base::IsSetRaw_seq (void) const
	can optionally specify the deleted sequence Check if a value has been assigned to Raw_seq data member. More...
bool	CDeletion_Base::CanGetRaw_seq (void) const
	Check if it is safe to call GetRaw_seq method. More...
void	CDeletion_Base::ResetRaw_seq (void)
	Reset Raw_seq data member. More...
const TRaw_seq &	CDeletion_Base::GetRaw_seq (void) const
	Get the Raw_seq member data. More...
void	CDeletion_Base::SetRaw_seq (const TRaw_seq &value)
	Assign a value to Raw_seq data member. More...
void	CDeletion_Base::SetRaw_seq (TRaw_seq &&value)
TRaw_seq &	CDeletion_Base::SetRaw_seq (void)
	Assign a value to Raw_seq data member. More...
virtual void	CDeletion_Base::Reset (void)
	Reset the whole object. More...
	CDeletion_Base::CDeletion_Base (const CDeletion_Base &)
CDeletion_Base &	CDeletion_Base::operator= (const CDeletion_Base &)
	CDelins::CDelins (void)
	CDelins::~CDelins (void)
	CDelins::CDelins (const CDelins &value)
CDelins &	CDelins::operator= (const CDelins &value)
	CDelins_Base::CDelins_Base (void)
virtual	CDelins_Base::~CDelins_Base (void)
	CDelins_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CDelins_Base::C_Inserted_seq_info::C_Inserted_seq_info (void)
	CDelins_Base::C_Inserted_seq_info::~C_Inserted_seq_info (void)
	CDelins_Base::C_Inserted_seq_info::DECLARE_INTERNAL_TYPE_INFO ()
void	CDelins_Base::C_Inserted_seq_info::Reset (void)
	Reset the whole object. More...
void	CDelins_Base::C_Inserted_seq_info::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CDelins_Base::C_Inserted_seq_info::Which (void) const
	Which variant is currently selected. More...
void	CDelins_Base::C_Inserted_seq_info::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CDelins_Base::C_Inserted_seq_info::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CDelins_Base::C_Inserted_seq_info::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CDelins_Base::C_Inserted_seq_info::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CDelins_Base::C_Inserted_seq_info::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CDelins_Base::C_Inserted_seq_info::IsIdentifier (void) const
	Check if variant Identifier is selected. More...
const TIdentifier &	CDelins_Base::C_Inserted_seq_info::GetIdentifier (void) const
	Get the variant data. More...
TIdentifier &	CDelins_Base::C_Inserted_seq_info::SetIdentifier (void)
	Select the variant. More...
void	CDelins_Base::C_Inserted_seq_info::SetIdentifier (const TIdentifier &value)
	Select the variant and set its data. More...
bool	CDelins_Base::C_Inserted_seq_info::IsRaw_seq (void) const
	Check if variant Raw_seq is selected. More...
const TRaw_seq &	CDelins_Base::C_Inserted_seq_info::GetRaw_seq (void) const
	Get the variant data. More...
TRaw_seq &	CDelins_Base::C_Inserted_seq_info::SetRaw_seq (void)
	Select the variant. More...
void	CDelins_Base::C_Inserted_seq_info::SetRaw_seq (const TRaw_seq &value)
	Select the variant and set its data. More...
bool	CDelins_Base::C_Inserted_seq_info::IsCount (void) const
	Check if variant Count is selected. More...
const TCount &	CDelins_Base::C_Inserted_seq_info::GetCount (void) const
	Get the variant data. More...
TCount &	CDelins_Base::C_Inserted_seq_info::SetCount (void)
	Select the variant. More...
void	CDelins_Base::C_Inserted_seq_info::SetCount (TCount &value)
	Select the variant and set its data. More...
bool	CDelins_Base::C_Inserted_seq_info::IsSubseq (void) const
	Check if variant Subseq is selected. More...
const TSubseq &	CDelins_Base::C_Inserted_seq_info::GetSubseq (void) const
	Get the variant data. More...
TSubseq &	CDelins_Base::C_Inserted_seq_info::SetSubseq (void)
	Select the variant. More...
void	CDelins_Base::C_Inserted_seq_info::SetSubseq (TSubseq &value)
	Select the variant and set its data. More...
	CDelins_Base::C_Inserted_seq_info::C_Inserted_seq_info (const C_Inserted_seq_info &)
C_Inserted_seq_info &	CDelins_Base::C_Inserted_seq_info::operator= (const C_Inserted_seq_info &)
void	CDelins_Base::C_Inserted_seq_info::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CDelins_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CDelins_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CDelins_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CDelins_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CDelins_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CDelins_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CDelins_Base::IsSetDeleted_raw_seq (void) const
	can optionally specify the deleted sequence Check if a value has been assigned to Deleted_raw_seq data member. More...
bool	CDelins_Base::CanGetDeleted_raw_seq (void) const
	Check if it is safe to call GetDeleted_raw_seq method. More...
void	CDelins_Base::ResetDeleted_raw_seq (void)
	Reset Deleted_raw_seq data member. More...
const TDeleted_raw_seq &	CDelins_Base::GetDeleted_raw_seq (void) const
	Get the Deleted_raw_seq member data. More...
void	CDelins_Base::SetDeleted_raw_seq (const TDeleted_raw_seq &value)
	Assign a value to Deleted_raw_seq data member. More...
void	CDelins_Base::SetDeleted_raw_seq (TDeleted_raw_seq &&value)
TDeleted_raw_seq &	CDelins_Base::SetDeleted_raw_seq (void)
	Assign a value to Deleted_raw_seq data member. More...
bool	CDelins_Base::IsSetInserted_seq_info (void) const
	Check if a value has been assigned to Inserted_seq_info data member. More...
bool	CDelins_Base::CanGetInserted_seq_info (void) const
	Check if it is safe to call GetInserted_seq_info method. More...
void	CDelins_Base::ResetInserted_seq_info (void)
	Reset Inserted_seq_info data member. More...
const TInserted_seq_info &	CDelins_Base::GetInserted_seq_info (void) const
	Get the Inserted_seq_info member data. More...
void	CDelins_Base::SetInserted_seq_info (TInserted_seq_info &value)
	Assign a value to Inserted_seq_info data member. More...
TInserted_seq_info &	CDelins_Base::SetInserted_seq_info (void)
	Assign a value to Inserted_seq_info data member. More...
virtual void	CDelins_Base::Reset (void)
	Reset the whole object. More...
	CDelins_Base::CDelins_Base (const CDelins_Base &)
CDelins_Base &	CDelins_Base::operator= (const CDelins_Base &)
	CDuplication::CDuplication (void)
	CDuplication::~CDuplication (void)
	CDuplication::CDuplication (const CDuplication &value)
CDuplication &	CDuplication::operator= (const CDuplication &value)
	CDuplication_Base::CDuplication_Base (void)
virtual	CDuplication_Base::~CDuplication_Base (void)
	CDuplication_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CDuplication_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CDuplication_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CDuplication_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CDuplication_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CDuplication_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CDuplication_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CDuplication_Base::IsSetRaw_seq (void) const
	can optionally specify the sequence duplicated sequence Check if a value has been assigned to Raw_seq data member. More...
bool	CDuplication_Base::CanGetRaw_seq (void) const
	Check if it is safe to call GetRaw_seq method. More...
void	CDuplication_Base::ResetRaw_seq (void)
	Reset Raw_seq data member. More...
const TRaw_seq &	CDuplication_Base::GetRaw_seq (void) const
	Get the Raw_seq member data. More...
void	CDuplication_Base::SetRaw_seq (const TRaw_seq &value)
	Assign a value to Raw_seq data member. More...
void	CDuplication_Base::SetRaw_seq (TRaw_seq &&value)
TRaw_seq &	CDuplication_Base::SetRaw_seq (void)
	Assign a value to Raw_seq data member. More...
virtual void	CDuplication_Base::Reset (void)
	Reset the whole object. More...
	CDuplication_Base::CDuplication_Base (const CDuplication_Base &)
CDuplication_Base &	CDuplication_Base::operator= (const CDuplication_Base &)
	CFrameshift::CFrameshift (void)
	CFrameshift::~CFrameshift (void)
	CFrameshift::CFrameshift (const CFrameshift &value)
CFrameshift &	CFrameshift::operator= (const CFrameshift &value)
	CFrameshift_Base::CFrameshift_Base (void)
virtual	CFrameshift_Base::~CFrameshift_Base (void)
	CFrameshift_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CFrameshift_Base::Reset (void)
	Reset the whole object. More...
virtual void	CFrameshift_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CFrameshift_Base::Which (void) const
	Which variant is currently selected. More...
void	CFrameshift_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CFrameshift_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CFrameshift_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CFrameshift_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CFrameshift_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CFrameshift_Base::IsAasite (void) const
	Check if variant Aasite is selected. More...
const TAasite &	CFrameshift_Base::GetAasite (void) const
	Get the variant data. More...
TAasite &	CFrameshift_Base::SetAasite (void)
	Select the variant. More...
void	CFrameshift_Base::SetAasite (TAasite &value)
	Select the variant and set its data. More...
bool	CFrameshift_Base::IsStopcodon (void) const
	Check if variant Stopcodon is selected. More...
void	CFrameshift_Base::SetStopcodon (void)
	Select the variant. More...
	CFrameshift_Base::CFrameshift_Base (const CFrameshift_Base &)
CFrameshift_Base &	CFrameshift_Base::operator= (const CFrameshift_Base &)
void	CFrameshift_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CInsertion::CInsertion (void)
	CInsertion::~CInsertion (void)
	CInsertion::CInsertion (const CInsertion &value)
CInsertion &	CInsertion::operator= (const CInsertion &value)
	CInsertion_Base::CInsertion_Base (void)
virtual	CInsertion_Base::~CInsertion_Base (void)
	CInsertion_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CInsertion_Base::C_Seqinfo::C_Seqinfo (void)
	CInsertion_Base::C_Seqinfo::~C_Seqinfo (void)
	CInsertion_Base::C_Seqinfo::DECLARE_INTERNAL_TYPE_INFO ()
void	CInsertion_Base::C_Seqinfo::Reset (void)
	Reset the whole object. More...
void	CInsertion_Base::C_Seqinfo::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CInsertion_Base::C_Seqinfo::Which (void) const
	Which variant is currently selected. More...
void	CInsertion_Base::C_Seqinfo::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CInsertion_Base::C_Seqinfo::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CInsertion_Base::C_Seqinfo::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CInsertion_Base::C_Seqinfo::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CInsertion_Base::C_Seqinfo::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CInsertion_Base::C_Seqinfo::IsIdentifier (void) const
	Check if variant Identifier is selected. More...
const TIdentifier &	CInsertion_Base::C_Seqinfo::GetIdentifier (void) const
	Get the variant data. More...
TIdentifier &	CInsertion_Base::C_Seqinfo::SetIdentifier (void)
	Select the variant. More...
void	CInsertion_Base::C_Seqinfo::SetIdentifier (const TIdentifier &value)
	Select the variant and set its data. More...
bool	CInsertion_Base::C_Seqinfo::IsRaw_seq (void) const
	Check if variant Raw_seq is selected. More...
const TRaw_seq &	CInsertion_Base::C_Seqinfo::GetRaw_seq (void) const
	Get the variant data. More...
TRaw_seq &	CInsertion_Base::C_Seqinfo::SetRaw_seq (void)
	Select the variant. More...
void	CInsertion_Base::C_Seqinfo::SetRaw_seq (const TRaw_seq &value)
	Select the variant and set its data. More...
bool	CInsertion_Base::C_Seqinfo::IsCount (void) const
	Check if variant Count is selected. More...
const TCount &	CInsertion_Base::C_Seqinfo::GetCount (void) const
	Get the variant data. More...
TCount &	CInsertion_Base::C_Seqinfo::SetCount (void)
	Select the variant. More...
void	CInsertion_Base::C_Seqinfo::SetCount (TCount &value)
	Select the variant and set its data. More...
bool	CInsertion_Base::C_Seqinfo::IsSubseq (void) const
	Check if variant Subseq is selected. More...
const TSubseq &	CInsertion_Base::C_Seqinfo::GetSubseq (void) const
	Get the variant data. More...
TSubseq &	CInsertion_Base::C_Seqinfo::SetSubseq (void)
	Select the variant. More...
void	CInsertion_Base::C_Seqinfo::SetSubseq (TSubseq &value)
	Select the variant and set its data. More...
	CInsertion_Base::C_Seqinfo::C_Seqinfo (const C_Seqinfo &)
C_Seqinfo &	CInsertion_Base::C_Seqinfo::operator= (const C_Seqinfo &)
void	CInsertion_Base::C_Seqinfo::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CInsertion_Base::IsSetInt (void) const
	Check if a value has been assigned to Int data member. More...
bool	CInsertion_Base::CanGetInt (void) const
	Check if it is safe to call GetInt method. More...
void	CInsertion_Base::ResetInt (void)
	Reset Int data member. More...
const TInt &	CInsertion_Base::GetInt (void) const
	Get the Int member data. More...
void	CInsertion_Base::SetInt (TInt &value)
	Assign a value to Int data member. More...
TInt &	CInsertion_Base::SetInt (void)
	Assign a value to Int data member. More...
bool	CInsertion_Base::IsSetSeqinfo (void) const
	Check if a value has been assigned to Seqinfo data member. More...
bool	CInsertion_Base::CanGetSeqinfo (void) const
	Check if it is safe to call GetSeqinfo method. More...
void	CInsertion_Base::ResetSeqinfo (void)
	Reset Seqinfo data member. More...
const TSeqinfo &	CInsertion_Base::GetSeqinfo (void) const
	Get the Seqinfo member data. More...
void	CInsertion_Base::SetSeqinfo (TSeqinfo &value)
	Assign a value to Seqinfo data member. More...
TSeqinfo &	CInsertion_Base::SetSeqinfo (void)
	Assign a value to Seqinfo data member. More...
virtual void	CInsertion_Base::Reset (void)
	Reset the whole object. More...
	CInsertion_Base::CInsertion_Base (const CInsertion_Base &)
CInsertion_Base &	CInsertion_Base::operator= (const CInsertion_Base &)
	CInversion::CInversion (void)
	CInversion::~CInversion (void)
	CInversion::CInversion (const CInversion &value)
CInversion &	CInversion::operator= (const CInversion &value)
	CInversion_Base::CInversion_Base (void)
virtual	CInversion_Base::~CInversion_Base (void)
	CInversion_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CInversion_Base::IsSetNtint (void) const
	Check if a value has been assigned to Ntint data member. More...
bool	CInversion_Base::CanGetNtint (void) const
	Check if it is safe to call GetNtint method. More...
void	CInversion_Base::ResetNtint (void)
	Reset Ntint data member. More...
const TNtint &	CInversion_Base::GetNtint (void) const
	Get the Ntint member data. More...
void	CInversion_Base::SetNtint (TNtint &value)
	Assign a value to Ntint data member. More...
TNtint &	CInversion_Base::SetNtint (void)
	Assign a value to Ntint data member. More...
bool	CInversion_Base::IsSetRaw_seq (void) const
	Check if a value has been assigned to Raw_seq data member. More...
bool	CInversion_Base::CanGetRaw_seq (void) const
	Check if it is safe to call GetRaw_seq method. More...
void	CInversion_Base::ResetRaw_seq (void)
	Reset Raw_seq data member. More...
const TRaw_seq &	CInversion_Base::GetRaw_seq (void) const
	Get the Raw_seq member data. More...
void	CInversion_Base::SetRaw_seq (const TRaw_seq &value)
	Assign a value to Raw_seq data member. More...
void	CInversion_Base::SetRaw_seq (TRaw_seq &&value)
TRaw_seq &	CInversion_Base::SetRaw_seq (void)
	Assign a value to Raw_seq data member. More...
bool	CInversion_Base::IsSetSize (void) const
	optionall specify the size of the inverted sequence Check if a value has been assigned to Size data member. More...
bool	CInversion_Base::CanGetSize (void) const
	Check if it is safe to call GetSize method. More...
void	CInversion_Base::ResetSize (void)
	Reset Size data member. More...
TSize	CInversion_Base::GetSize (void) const
	Get the Size member data. More...
void	CInversion_Base::SetSize (TSize value)
	Assign a value to Size data member. More...
TSize &	CInversion_Base::SetSize (void)
	Assign a value to Size data member. More...
virtual void	CInversion_Base::Reset (void)
	Reset the whole object. More...
	CInversion_Base::CInversion_Base (const CInversion_Base &)
CInversion_Base &	CInversion_Base::operator= (const CInversion_Base &)
	CNaIdentity::CNaIdentity (void)
	CNaIdentity::~CNaIdentity (void)
	CNaIdentity::CNaIdentity (const CNaIdentity &value)
CNaIdentity &	CNaIdentity::operator= (const CNaIdentity &value)
	CNaIdentity_Base::CNaIdentity_Base (void)
virtual	CNaIdentity_Base::~CNaIdentity_Base (void)
	CNaIdentity_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNaIdentity_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CNaIdentity_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CNaIdentity_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CNaIdentity_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CNaIdentity_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CNaIdentity_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CNaIdentity_Base::IsSetNucleotide (void) const
	Check if a value has been assigned to Nucleotide data member. More...
bool	CNaIdentity_Base::CanGetNucleotide (void) const
	Check if it is safe to call GetNucleotide method. More...
void	CNaIdentity_Base::ResetNucleotide (void)
	Reset Nucleotide data member. More...
const TNucleotide &	CNaIdentity_Base::GetNucleotide (void) const
	Get the Nucleotide member data. More...
void	CNaIdentity_Base::SetNucleotide (const TNucleotide &value)
	Assign a value to Nucleotide data member. More...
void	CNaIdentity_Base::SetNucleotide (TNucleotide &&value)
TNucleotide &	CNaIdentity_Base::SetNucleotide (void)
	Assign a value to Nucleotide data member. More...
virtual void	CNaIdentity_Base::Reset (void)
	Reset the whole object. More...
	CNaIdentity_Base::CNaIdentity_Base (const CNaIdentity_Base &)
CNaIdentity_Base &	CNaIdentity_Base::operator= (const CNaIdentity_Base &)
	CNaSub::CNaSub (void)
	CNaSub::~CNaSub (void)
	CNaSub::CNaSub (const CNaSub &value)
CNaSub &	CNaSub::operator= (const CNaSub &value)
	CNaSub_Base::CNaSub_Base (void)
virtual	CNaSub_Base::~CNaSub_Base (void)
	CNaSub_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNaSub_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CNaSub_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CNaSub_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CNaSub_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CNaSub_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CNaSub_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CNaSub_Base::IsSetInitial (void) const
	Check if a value has been assigned to Initial data member. More...
bool	CNaSub_Base::CanGetInitial (void) const
	Check if it is safe to call GetInitial method. More...
void	CNaSub_Base::ResetInitial (void)
	Reset Initial data member. More...
const TInitial &	CNaSub_Base::GetInitial (void) const
	Get the Initial member data. More...
void	CNaSub_Base::SetInitial (const TInitial &value)
	Assign a value to Initial data member. More...
void	CNaSub_Base::SetInitial (TInitial &&value)
TInitial &	CNaSub_Base::SetInitial (void)
	Assign a value to Initial data member. More...
bool	CNaSub_Base::IsSetFinal (void) const
	Check if a value has been assigned to Final data member. More...
bool	CNaSub_Base::CanGetFinal (void) const
	Check if it is safe to call GetFinal method. More...
void	CNaSub_Base::ResetFinal (void)
	Reset Final data member. More...
const TFinal &	CNaSub_Base::GetFinal (void) const
	Get the Final member data. More...
void	CNaSub_Base::SetFinal (const TFinal &value)
	Assign a value to Final data member. More...
void	CNaSub_Base::SetFinal (TFinal &&value)
TFinal &	CNaSub_Base::SetFinal (void)
	Assign a value to Final data member. More...
virtual void	CNaSub_Base::Reset (void)
	Reset the whole object. More...
	CNaSub_Base::CNaSub_Base (const CNaSub_Base &)
CNaSub_Base &	CNaSub_Base::operator= (const CNaSub_Base &)
	CNtermExtension::CNtermExtension (void)
	CNtermExtension::~CNtermExtension (void)
	CNtermExtension::CNtermExtension (const CNtermExtension &value)
CNtermExtension &	CNtermExtension::operator= (const CNtermExtension &value)
	CNtermExtension_Base::CNtermExtension_Base (void)
virtual	CNtermExtension_Base::~CNtermExtension_Base (void)
	CNtermExtension_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNtermExtension_Base::IsSetNewStart (void) const
	Check if a value has been assigned to NewStart data member. More...
bool	CNtermExtension_Base::CanGetNewStart (void) const
	Check if it is safe to call GetNewStart method. More...
void	CNtermExtension_Base::ResetNewStart (void)
	Reset NewStart data member. More...
const TNewStart &	CNtermExtension_Base::GetNewStart (void) const
	Get the NewStart member data. More...
void	CNtermExtension_Base::SetNewStart (TNewStart &value)
	Assign a value to NewStart data member. More...
TNewStart &	CNtermExtension_Base::SetNewStart (void)
	Assign a value to NewStart data member. More...
bool	CNtermExtension_Base::IsSetNewAa (void) const
	Check if a value has been assigned to NewAa data member. More...
bool	CNtermExtension_Base::CanGetNewAa (void) const
	Check if it is safe to call GetNewAa method. More...
void	CNtermExtension_Base::ResetNewAa (void)
	Reset NewAa data member. More...
const TNewAa &	CNtermExtension_Base::GetNewAa (void) const
	Get the NewAa member data. More...
void	CNtermExtension_Base::SetNewAa (const TNewAa &value)
	Assign a value to NewAa data member. More...
void	CNtermExtension_Base::SetNewAa (TNewAa &&value)
TNewAa &	CNtermExtension_Base::SetNewAa (void)
	Assign a value to NewAa data member. More...
virtual void	CNtermExtension_Base::Reset (void)
	Reset the whole object. More...
	CNtermExtension_Base::CNtermExtension_Base (const CNtermExtension_Base &)
CNtermExtension_Base &	CNtermExtension_Base::operator= (const CNtermExtension_Base &)
	CNtInterval::CNtInterval (void)
	CNtInterval::~CNtInterval (void)
	CNtInterval::CNtInterval (const CNtInterval &value)
CNtInterval &	CNtInterval::operator= (const CNtInterval &value)
	CNtInterval_Base::CNtInterval_Base (void)
virtual	CNtInterval_Base::~CNtInterval_Base (void)
	CNtInterval_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNtInterval_Base::IsSetStart (void) const
	Check if a value has been assigned to Start data member. More...
bool	CNtInterval_Base::CanGetStart (void) const
	Check if it is safe to call GetStart method. More...
void	CNtInterval_Base::ResetStart (void)
	Reset Start data member. More...
const TStart &	CNtInterval_Base::GetStart (void) const
	Get the Start member data. More...
void	CNtInterval_Base::SetStart (TStart &value)
	Assign a value to Start data member. More...
TStart &	CNtInterval_Base::SetStart (void)
	Assign a value to Start data member. More...
bool	CNtInterval_Base::IsSetStop (void) const
	Check if a value has been assigned to Stop data member. More...
bool	CNtInterval_Base::CanGetStop (void) const
	Check if it is safe to call GetStop method. More...
void	CNtInterval_Base::ResetStop (void)
	Reset Stop data member. More...
const TStop &	CNtInterval_Base::GetStop (void) const
	Get the Stop member data. More...
void	CNtInterval_Base::SetStop (TStop &value)
	Assign a value to Stop data member. More...
TStop &	CNtInterval_Base::SetStop (void)
	Assign a value to Stop data member. More...
virtual void	CNtInterval_Base::Reset (void)
	Reset the whole object. More...
	CNtInterval_Base::CNtInterval_Base (const CNtInterval_Base &)
CNtInterval_Base &	CNtInterval_Base::operator= (const CNtInterval_Base &)
	CNtIntLimit::CNtIntLimit (void)
	CNtIntLimit::~CNtIntLimit (void)
	CNtIntLimit::CNtIntLimit (const CNtIntLimit &value)
CNtIntLimit &	CNtIntLimit::operator= (const CNtIntLimit &value)
	CNtIntLimit_Base::CNtIntLimit_Base (void)
virtual	CNtIntLimit_Base::~CNtIntLimit_Base (void)
	CNtIntLimit_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CNtIntLimit_Base::Reset (void)
	Reset the whole object. More...
virtual void	CNtIntLimit_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CNtIntLimit_Base::Which (void) const
	Which variant is currently selected. More...
void	CNtIntLimit_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CNtIntLimit_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CNtIntLimit_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CNtIntLimit_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CNtIntLimit_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CNtIntLimit_Base::IsSite (void) const
	Check if variant Site is selected. More...
const TSite &	CNtIntLimit_Base::GetSite (void) const
	Get the variant data. More...
TSite &	CNtIntLimit_Base::SetSite (void)
	Select the variant. More...
void	CNtIntLimit_Base::SetSite (TSite &value)
	Select the variant and set its data. More...
bool	CNtIntLimit_Base::IsRange (void) const
	Check if variant Range is selected. More...
const TRange &	CNtIntLimit_Base::GetRange (void) const
	Get the variant data. More...
TRange &	CNtIntLimit_Base::SetRange (void)
	Select the variant. More...
void	CNtIntLimit_Base::SetRange (TRange &value)
	Select the variant and set its data. More...
	CNtIntLimit_Base::CNtIntLimit_Base (const CNtIntLimit_Base &)
CNtIntLimit_Base &	CNtIntLimit_Base::operator= (const CNtIntLimit_Base &)
void	CNtIntLimit_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CNtLocation::CNtLocation (void)
	CNtLocation::~CNtLocation (void)
	CNtLocation::CNtLocation (const CNtLocation &value)
CNtLocation &	CNtLocation::operator= (const CNtLocation &value)
	CNtLocation_Base::CNtLocation_Base (void)
virtual	CNtLocation_Base::~CNtLocation_Base (void)
	CNtLocation_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CNtLocation_Base::Reset (void)
	Reset the whole object. More...
virtual void	CNtLocation_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CNtLocation_Base::Which (void) const
	Which variant is currently selected. More...
void	CNtLocation_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CNtLocation_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CNtLocation_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CNtLocation_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CNtLocation_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CNtLocation_Base::IsSite (void) const
	Check if variant Site is selected. More...
const TSite &	CNtLocation_Base::GetSite (void) const
	Get the variant data. More...
TSite &	CNtLocation_Base::SetSite (void)
	Select the variant. More...
void	CNtLocation_Base::SetSite (TSite &value)
	Select the variant and set its data. More...
bool	CNtLocation_Base::IsRange (void) const
	Check if variant Range is selected. More...
const TRange &	CNtLocation_Base::GetRange (void) const
	Get the variant data. More...
TRange &	CNtLocation_Base::SetRange (void)
	Select the variant. More...
void	CNtLocation_Base::SetRange (TRange &value)
	Select the variant and set its data. More...
bool	CNtLocation_Base::IsInt (void) const
	Check if variant Int is selected. More...
const TInt &	CNtLocation_Base::GetInt (void) const
	Get the variant data. More...
TInt &	CNtLocation_Base::SetInt (void)
	Select the variant. More...
void	CNtLocation_Base::SetInt (TInt &value)
	Select the variant and set its data. More...
	CNtLocation_Base::CNtLocation_Base (const CNtLocation_Base &)
CNtLocation_Base &	CNtLocation_Base::operator= (const CNtLocation_Base &)
void	CNtLocation_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CNtSite::CNtSite (void)
	CNtSite::~CNtSite (void)
	CNtSite::CNtSite (const CNtSite &value)
CNtSite &	CNtSite::operator= (const CNtSite &value)
	CNtSite_Base::CNtSite_Base (void)
virtual	CNtSite_Base::~CNtSite_Base (void)
	CNtSite_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CNtSite_Base::C_Base::C_Base (void)
	CNtSite_Base::C_Base::~C_Base (void)
	CNtSite_Base::C_Base::DECLARE_INTERNAL_TYPE_INFO ()
void	CNtSite_Base::C_Base::Reset (void)
	Reset the whole object. More...
void	CNtSite_Base::C_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CNtSite_Base::C_Base::Which (void) const
	Which variant is currently selected. More...
void	CNtSite_Base::C_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CNtSite_Base::C_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CNtSite_Base::C_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CNtSite_Base::C_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CNtSite_Base::C_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CNtSite_Base::C_Base::IsVal (void) const
	Check if variant Val is selected. More...
TVal	CNtSite_Base::C_Base::GetVal (void) const
	Get the variant data. More...
TVal &	CNtSite_Base::C_Base::SetVal (void)
	Select the variant. More...
void	CNtSite_Base::C_Base::SetVal (TVal value)
	Select the variant and set its data. More...
bool	CNtSite_Base::C_Base::IsUnknown (void) const
	Check if variant Unknown is selected. More...
void	CNtSite_Base::C_Base::SetUnknown (void)
	Select the variant. More...
	CNtSite_Base::C_Base::C_Base (const C_Base &)
C_Base &	CNtSite_Base::C_Base::operator= (const C_Base &)
void	CNtSite_Base::C_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CNtSite_Base::C_Offset::C_Offset (void)
	CNtSite_Base::C_Offset::~C_Offset (void)
	CNtSite_Base::C_Offset::DECLARE_INTERNAL_TYPE_INFO ()
void	CNtSite_Base::C_Offset::Reset (void)
	Reset the whole object. More...
void	CNtSite_Base::C_Offset::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CNtSite_Base::C_Offset::Which (void) const
	Which variant is currently selected. More...
void	CNtSite_Base::C_Offset::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CNtSite_Base::C_Offset::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CNtSite_Base::C_Offset::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CNtSite_Base::C_Offset::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CNtSite_Base::C_Offset::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CNtSite_Base::C_Offset::IsVal (void) const
	Check if variant Val is selected. More...
TVal	CNtSite_Base::C_Offset::GetVal (void) const
	Get the variant data. More...
TVal &	CNtSite_Base::C_Offset::SetVal (void)
	Select the variant. More...
void	CNtSite_Base::C_Offset::SetVal (TVal value)
	Select the variant and set its data. More...
bool	CNtSite_Base::C_Offset::IsPlus_unknown (void) const
	Check if variant Plus_unknown is selected. More...
void	CNtSite_Base::C_Offset::SetPlus_unknown (void)
	Select the variant. More...
bool	CNtSite_Base::C_Offset::IsMinus_unknown (void) const
	Check if variant Minus_unknown is selected. More...
void	CNtSite_Base::C_Offset::SetMinus_unknown (void)
	Select the variant. More...
	CNtSite_Base::C_Offset::C_Offset (const C_Offset &)
C_Offset &	CNtSite_Base::C_Offset::operator= (const C_Offset &)
void	CNtSite_Base::C_Offset::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CNtSite_Base::C_Utr::C_Utr (void)
	CNtSite_Base::C_Utr::~C_Utr (void)
	CNtSite_Base::C_Utr::DECLARE_INTERNAL_TYPE_INFO ()
void	CNtSite_Base::C_Utr::Reset (void)
	Reset the whole object. More...
void	CNtSite_Base::C_Utr::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CNtSite_Base::C_Utr::Which (void) const
	Which variant is currently selected. More...
void	CNtSite_Base::C_Utr::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CNtSite_Base::C_Utr::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CNtSite_Base::C_Utr::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CNtSite_Base::C_Utr::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CNtSite_Base::C_Utr::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CNtSite_Base::C_Utr::IsFive_prime (void) const
	Check if variant Five_prime is selected. More...
void	CNtSite_Base::C_Utr::SetFive_prime (void)
	Select the variant. More...
bool	CNtSite_Base::C_Utr::IsThree_prime (void) const
	Check if variant Three_prime is selected. More...
void	CNtSite_Base::C_Utr::SetThree_prime (void)
	Select the variant. More...
	CNtSite_Base::C_Utr::C_Utr (const C_Utr &)
C_Utr &	CNtSite_Base::C_Utr::operator= (const C_Utr &)
void	CNtSite_Base::C_Utr::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CNtSite_Base::IsSetSeqid (void) const
	Check if a value has been assigned to Seqid data member. More...
bool	CNtSite_Base::CanGetSeqid (void) const
	Check if it is safe to call GetSeqid method. More...
void	CNtSite_Base::ResetSeqid (void)
	Reset Seqid data member. More...
const TSeqid &	CNtSite_Base::GetSeqid (void) const
	Get the Seqid member data. More...
void	CNtSite_Base::SetSeqid (const TSeqid &value)
	Assign a value to Seqid data member. More...
void	CNtSite_Base::SetSeqid (TSeqid &&value)
TSeqid &	CNtSite_Base::SetSeqid (void)
	Assign a value to Seqid data member. More...
bool	CNtSite_Base::IsSetSeqtype (void) const
	Check if a value has been assigned to Seqtype data member. More...
bool	CNtSite_Base::CanGetSeqtype (void) const
	Check if it is safe to call GetSeqtype method. More...
void	CNtSite_Base::ResetSeqtype (void)
	Reset Seqtype data member. More...
TSeqtype	CNtSite_Base::GetSeqtype (void) const
	Get the Seqtype member data. More...
void	CNtSite_Base::SetSeqtype (TSeqtype value)
	Assign a value to Seqtype data member. More...
TSeqtype &	CNtSite_Base::SetSeqtype (void)
	Assign a value to Seqtype data member. More...
bool	CNtSite_Base::IsSetBase (void) const
	Check if a value has been assigned to Base data member. More...
bool	CNtSite_Base::CanGetBase (void) const
	Check if it is safe to call GetBase method. More...
void	CNtSite_Base::ResetBase (void)
	Reset Base data member. More...
const TBase &	CNtSite_Base::GetBase (void) const
	Get the Base member data. More...
void	CNtSite_Base::SetBase (TBase &value)
	Assign a value to Base data member. More...
TBase &	CNtSite_Base::SetBase (void)
	Assign a value to Base data member. More...
bool	CNtSite_Base::IsSetOffset (void) const
	Check if a value has been assigned to Offset data member. More...
bool	CNtSite_Base::CanGetOffset (void) const
	Check if it is safe to call GetOffset method. More...
void	CNtSite_Base::ResetOffset (void)
	Reset Offset data member. More...
const TOffset &	CNtSite_Base::GetOffset (void) const
	Get the Offset member data. More...
void	CNtSite_Base::SetOffset (TOffset &value)
	Assign a value to Offset data member. More...
TOffset &	CNtSite_Base::SetOffset (void)
	Assign a value to Offset data member. More...
bool	CNtSite_Base::IsSetUtr (void) const
	Check if a value has been assigned to Utr data member. More...
bool	CNtSite_Base::CanGetUtr (void) const
	Check if it is safe to call GetUtr method. More...
void	CNtSite_Base::ResetUtr (void)
	Reset Utr data member. More...
const TUtr &	CNtSite_Base::GetUtr (void) const
	Get the Utr member data. More...
void	CNtSite_Base::SetUtr (TUtr &value)
	Assign a value to Utr data member. More...
TUtr &	CNtSite_Base::SetUtr (void)
	Assign a value to Utr data member. More...
bool	CNtSite_Base::IsSetStrand_minus (void) const
	TRUE implies opposite transcriptional orientation to to the reference sequence Check if a value has been assigned to Strand_minus data member. More...
bool	CNtSite_Base::CanGetStrand_minus (void) const
	Check if it is safe to call GetStrand_minus method. More...
void	CNtSite_Base::ResetStrand_minus (void)
	Reset Strand_minus data member. More...
void	CNtSite_Base::SetDefaultStrand_minus (void)
	Assign default value to Strand_minus data member. More...
TStrand_minus	CNtSite_Base::GetStrand_minus (void) const
	Get the Strand_minus member data. More...
void	CNtSite_Base::SetStrand_minus (TStrand_minus value)
	Assign a value to Strand_minus data member. More...
TStrand_minus &	CNtSite_Base::SetStrand_minus (void)
	Assign a value to Strand_minus data member. More...
bool	CNtSite_Base::IsSetFuzzy (void) const
	TRUE implies HGVS subexpression of the form (base + offset), Check if a value has been assigned to Fuzzy data member. More...
bool	CNtSite_Base::CanGetFuzzy (void) const
	Check if it is safe to call GetFuzzy method. More...
void	CNtSite_Base::ResetFuzzy (void)
	Reset Fuzzy data member. More...
void	CNtSite_Base::SetDefaultFuzzy (void)
	Assign default value to Fuzzy data member. More...
TFuzzy	CNtSite_Base::GetFuzzy (void) const
	Get the Fuzzy member data. More...
void	CNtSite_Base::SetFuzzy (TFuzzy value)
	Assign a value to Fuzzy data member. More...
TFuzzy &	CNtSite_Base::SetFuzzy (void)
	Assign a value to Fuzzy data member. More...
bool	CNtSite_Base::IsSetFuzzy_offset (void) const
	TRUE implies HGVS subexpression of the form base+(offset) Check if a value has been assigned to Fuzzy_offset data member. More...
bool	CNtSite_Base::CanGetFuzzy_offset (void) const
	Check if it is safe to call GetFuzzy_offset method. More...
void	CNtSite_Base::ResetFuzzy_offset (void)
	Reset Fuzzy_offset data member. More...
void	CNtSite_Base::SetDefaultFuzzy_offset (void)
	Assign default value to Fuzzy_offset data member. More...
TFuzzy_offset	CNtSite_Base::GetFuzzy_offset (void) const
	Get the Fuzzy_offset member data. More...
void	CNtSite_Base::SetFuzzy_offset (TFuzzy_offset value)
	Assign a value to Fuzzy_offset data member. More...
TFuzzy_offset &	CNtSite_Base::SetFuzzy_offset (void)
	Assign a value to Fuzzy_offset data member. More...
virtual void	CNtSite_Base::Reset (void)
	Reset the whole object. More...
	CNtSite_Base::CNtSite_Base (const CNtSite_Base &)
CNtSite_Base &	CNtSite_Base::operator= (const CNtSite_Base &)
	CNtSiteRange::CNtSiteRange (void)
	CNtSiteRange::~CNtSiteRange (void)
	CNtSiteRange::CNtSiteRange (const CNtSiteRange &value)
CNtSiteRange &	CNtSiteRange::operator= (const CNtSiteRange &value)
	CNtSiteRange_Base::CNtSiteRange_Base (void)
virtual	CNtSiteRange_Base::~CNtSiteRange_Base (void)
	CNtSiteRange_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CNtSiteRange_Base::IsSetStart (void) const
	Check if a value has been assigned to Start data member. More...
bool	CNtSiteRange_Base::CanGetStart (void) const
	Check if it is safe to call GetStart method. More...
void	CNtSiteRange_Base::ResetStart (void)
	Reset Start data member. More...
const TStart &	CNtSiteRange_Base::GetStart (void) const
	Get the Start member data. More...
void	CNtSiteRange_Base::SetStart (TStart &value)
	Assign a value to Start data member. More...
TStart &	CNtSiteRange_Base::SetStart (void)
	Assign a value to Start data member. More...
bool	CNtSiteRange_Base::IsSetStop (void) const
	Check if a value has been assigned to Stop data member. More...
bool	CNtSiteRange_Base::CanGetStop (void) const
	Check if it is safe to call GetStop method. More...
void	CNtSiteRange_Base::ResetStop (void)
	Reset Stop data member. More...
const TStop &	CNtSiteRange_Base::GetStop (void) const
	Get the Stop member data. More...
void	CNtSiteRange_Base::SetStop (TStop &value)
	Assign a value to Stop data member. More...
TStop &	CNtSiteRange_Base::SetStop (void)
	Assign a value to Stop data member. More...
virtual void	CNtSiteRange_Base::Reset (void)
	Reset the whole object. More...
	CNtSiteRange_Base::CNtSiteRange_Base (const CNtSiteRange_Base &)
CNtSiteRange_Base &	CNtSiteRange_Base::operator= (const CNtSiteRange_Base &)
	CProteinExtension::CProteinExtension (void)
	CProteinExtension::~CProteinExtension (void)
	CProteinExtension::CProteinExtension (const CProteinExtension &value)
CProteinExtension &	CProteinExtension::operator= (const CProteinExtension &value)
	CProteinExtension_Base::CProteinExtension_Base (void)
virtual	CProteinExtension_Base::~CProteinExtension_Base (void)
	CProteinExtension_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CProteinExtension_Base::Reset (void)
	Reset the whole object. More...
virtual void	CProteinExtension_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CProteinExtension_Base::Which (void) const
	Which variant is currently selected. More...
void	CProteinExtension_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CProteinExtension_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CProteinExtension_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CProteinExtension_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CProteinExtension_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CProteinExtension_Base::IsNterm_ext (void) const
	Check if variant Nterm_ext is selected. More...
const TNterm_ext &	CProteinExtension_Base::GetNterm_ext (void) const
	Get the variant data. More...
TNterm_ext &	CProteinExtension_Base::SetNterm_ext (void)
	Select the variant. More...
void	CProteinExtension_Base::SetNterm_ext (TNterm_ext &value)
	Select the variant and set its data. More...
bool	CProteinExtension_Base::IsCterm_ext (void) const
	Check if variant Cterm_ext is selected. More...
const TCterm_ext &	CProteinExtension_Base::GetCterm_ext (void) const
	Get the variant data. More...
TCterm_ext &	CProteinExtension_Base::SetCterm_ext (void)
	Select the variant. More...
void	CProteinExtension_Base::SetCterm_ext (TCterm_ext &value)
	Select the variant and set its data. More...
	CProteinExtension_Base::CProteinExtension_Base (const CProteinExtension_Base &)
CProteinExtension_Base &	CProteinExtension_Base::operator= (const CProteinExtension_Base &)
void	CProteinExtension_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CProteinSub::CProteinSub (void)
	CProteinSub::~CProteinSub (void)
	CProteinSub::CProteinSub (const CProteinSub &value)
CProteinSub &	CProteinSub::operator= (const CProteinSub &value)
	CProteinSub_Base::CProteinSub_Base (void)
virtual	CProteinSub_Base::~CProteinSub_Base (void)
	CProteinSub_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CProteinSub_Base::EType (void)
	Access to EType's attributes (values, names) as defined in spec. More...
bool	CProteinSub_Base::IsSetType (void) const
	Check if a value has been assigned to Type data member. More...
bool	CProteinSub_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CProteinSub_Base::ResetType (void)
	Reset Type data member. More...
TType	CProteinSub_Base::GetType (void) const
	Get the Type member data. More...
void	CProteinSub_Base::SetType (TType value)
	Assign a value to Type data member. More...
TType &	CProteinSub_Base::SetType (void)
	Assign a value to Type data member. More...
bool	CProteinSub_Base::IsSetInitial (void) const
	Check if a value has been assigned to Initial data member. More...
bool	CProteinSub_Base::CanGetInitial (void) const
	Check if it is safe to call GetInitial method. More...
void	CProteinSub_Base::ResetInitial (void)
	Reset Initial data member. More...
const TInitial &	CProteinSub_Base::GetInitial (void) const
	Get the Initial member data. More...
void	CProteinSub_Base::SetInitial (TInitial &value)
	Assign a value to Initial data member. More...
TInitial &	CProteinSub_Base::SetInitial (void)
	Assign a value to Initial data member. More...
bool	CProteinSub_Base::IsSetFinal (void) const
	Check if a value has been assigned to Final data member. More...
bool	CProteinSub_Base::CanGetFinal (void) const
	Check if it is safe to call GetFinal method. More...
void	CProteinSub_Base::ResetFinal (void)
	Reset Final data member. More...
const TFinal &	CProteinSub_Base::GetFinal (void) const
	Get the Final member data. More...
void	CProteinSub_Base::SetFinal (const TFinal &value)
	Assign a value to Final data member. More...
void	CProteinSub_Base::SetFinal (TFinal &&value)
TFinal &	CProteinSub_Base::SetFinal (void)
	Assign a value to Final data member. More...
virtual void	CProteinSub_Base::Reset (void)
	Reset the whole object. More...
	CProteinSub_Base::CProteinSub_Base (const CProteinSub_Base &)
CProteinSub_Base &	CProteinSub_Base::operator= (const CProteinSub_Base &)
	CRepeat::CRepeat (void)
	CRepeat::~CRepeat (void)
	CRepeat::CRepeat (const CRepeat &value)
CRepeat &	CRepeat::operator= (const CRepeat &value)
	CRepeat_Base::CRepeat_Base (void)
virtual	CRepeat_Base::~CRepeat_Base (void)
	CRepeat_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CRepeat_Base::IsSetLoc (void) const
	Check if a value has been assigned to Loc data member. More...
bool	CRepeat_Base::CanGetLoc (void) const
	Check if it is safe to call GetLoc method. More...
void	CRepeat_Base::ResetLoc (void)
	Reset Loc data member. More...
const TLoc &	CRepeat_Base::GetLoc (void) const
	Get the Loc member data. More...
void	CRepeat_Base::SetLoc (TLoc &value)
	Assign a value to Loc data member. More...
TLoc &	CRepeat_Base::SetLoc (void)
	Assign a value to Loc data member. More...
bool	CRepeat_Base::IsSetCount (void) const
	Check if a value has been assigned to Count data member. More...
bool	CRepeat_Base::CanGetCount (void) const
	Check if it is safe to call GetCount method. More...
void	CRepeat_Base::ResetCount (void)
	Reset Count data member. More...
const TCount &	CRepeat_Base::GetCount (void) const
	Get the Count member data. More...
void	CRepeat_Base::SetCount (TCount &value)
	Assign a value to Count data member. More...
TCount &	CRepeat_Base::SetCount (void)
	Assign a value to Count data member. More...
bool	CRepeat_Base::IsSetRaw_seq (void) const
	Used if ntloc is a site, not an interval Check if a value has been assigned to Raw_seq data member. More...
bool	CRepeat_Base::CanGetRaw_seq (void) const
	Check if it is safe to call GetRaw_seq method. More...
void	CRepeat_Base::ResetRaw_seq (void)
	Reset Raw_seq data member. More...
const TRaw_seq &	CRepeat_Base::GetRaw_seq (void) const
	Get the Raw_seq member data. More...
void	CRepeat_Base::SetRaw_seq (const TRaw_seq &value)
	Assign a value to Raw_seq data member. More...
void	CRepeat_Base::SetRaw_seq (TRaw_seq &&value)
TRaw_seq &	CRepeat_Base::SetRaw_seq (void)
	Assign a value to Raw_seq data member. More...
virtual void	CRepeat_Base::Reset (void)
	Reset the whole object. More...
	CRepeat_Base::CRepeat_Base (const CRepeat_Base &)
CRepeat_Base &	CRepeat_Base::operator= (const CRepeat_Base &)
	CSeqInterval::CSeqInterval (void)
	CSeqInterval::~CSeqInterval (void)
	CSeqInterval::CSeqInterval (const CSeqInterval &value)
CSeqInterval &	CSeqInterval::operator= (const CSeqInterval &value)
	CSeqInterval_Base::CSeqInterval_Base (void)
virtual	CSeqInterval_Base::~CSeqInterval_Base (void)
	CSeqInterval_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CSeqInterval_Base::Reset (void)
	Reset the whole object. More...
virtual void	CSeqInterval_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CSeqInterval_Base::Which (void) const
	Which variant is currently selected. More...
void	CSeqInterval_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CSeqInterval_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CSeqInterval_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CSeqInterval_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CSeqInterval_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CSeqInterval_Base::IsAaint (void) const
	Check if variant Aaint is selected. More...
const TAaint &	CSeqInterval_Base::GetAaint (void) const
	Get the variant data. More...
TAaint &	CSeqInterval_Base::SetAaint (void)
	Select the variant. More...
void	CSeqInterval_Base::SetAaint (TAaint &value)
	Select the variant and set its data. More...
bool	CSeqInterval_Base::IsNtint (void) const
	Check if variant Ntint is selected. More...
const TNtint &	CSeqInterval_Base::GetNtint (void) const
	Get the variant data. More...
TNtint &	CSeqInterval_Base::SetNtint (void)
	Select the variant. More...
void	CSeqInterval_Base::SetNtint (TNtint &value)
	Select the variant and set its data. More...
	CSeqInterval_Base::CSeqInterval_Base (const CSeqInterval_Base &)
CSeqInterval_Base &	CSeqInterval_Base::operator= (const CSeqInterval_Base &)
void	CSeqInterval_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CSeqLocation::CSeqLocation (void)
	CSeqLocation::~CSeqLocation (void)
	CSeqLocation::CSeqLocation (const CSeqLocation &value)
CSeqLocation &	CSeqLocation::operator= (const CSeqLocation &value)
	CSeqLocation_Base::CSeqLocation_Base (void)
virtual	CSeqLocation_Base::~CSeqLocation_Base (void)
	CSeqLocation_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CSeqLocation_Base::Reset (void)
	Reset the whole object. More...
virtual void	CSeqLocation_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CSeqLocation_Base::Which (void) const
	Which variant is currently selected. More...
void	CSeqLocation_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CSeqLocation_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CSeqLocation_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CSeqLocation_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CSeqLocation_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CSeqLocation_Base::IsAaloc (void) const
	Check if variant Aaloc is selected. More...
const TAaloc &	CSeqLocation_Base::GetAaloc (void) const
	Get the variant data. More...
TAaloc &	CSeqLocation_Base::SetAaloc (void)
	Select the variant. More...
void	CSeqLocation_Base::SetAaloc (TAaloc &value)
	Select the variant and set its data. More...
bool	CSeqLocation_Base::IsNtloc (void) const
	Check if variant Ntloc is selected. More...
const TNtloc &	CSeqLocation_Base::GetNtloc (void) const
	Get the variant data. More...
TNtloc &	CSeqLocation_Base::SetNtloc (void)
	Select the variant. More...
void	CSeqLocation_Base::SetNtloc (TNtloc &value)
	Select the variant and set its data. More...
	CSeqLocation_Base::CSeqLocation_Base (const CSeqLocation_Base &)
CSeqLocation_Base &	CSeqLocation_Base::operator= (const CSeqLocation_Base &)
void	CSeqLocation_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CSequenceVariant::CSequenceVariant (void)
	CSequenceVariant::~CSequenceVariant (void)
	CSequenceVariant::CSequenceVariant (const CSequenceVariant &value)
CSequenceVariant &	CSequenceVariant::operator= (const CSequenceVariant &value)
	CSequenceVariant_Base::CSequenceVariant_Base (void)
virtual	CSequenceVariant_Base::~CSequenceVariant_Base (void)
	CSequenceVariant_Base::DECLARE_INTERNAL_TYPE_INFO ()
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	CSequenceVariant_Base::EComplex (void)
	Access to EComplex's attributes (values, names) as defined in spec. More...
bool	CSequenceVariant_Base::IsSetSeqtype (void) const
	Check if a value has been assigned to Seqtype data member. More...
bool	CSequenceVariant_Base::CanGetSeqtype (void) const
	Check if it is safe to call GetSeqtype method. More...
void	CSequenceVariant_Base::ResetSeqtype (void)
	Reset Seqtype data member. More...
TSeqtype	CSequenceVariant_Base::GetSeqtype (void) const
	Get the Seqtype member data. More...
void	CSequenceVariant_Base::SetSeqtype (TSeqtype value)
	Assign a value to Seqtype data member. More...
TSeqtype &	CSequenceVariant_Base::SetSeqtype (void)
	Assign a value to Seqtype data member. More...
bool	CSequenceVariant_Base::IsSetSubvariants (void) const
	Check if a value has been assigned to Subvariants data member. More...
bool	CSequenceVariant_Base::CanGetSubvariants (void) const
	Check if it is safe to call GetSubvariants method. More...
void	CSequenceVariant_Base::ResetSubvariants (void)
	Reset Subvariants data member. More...
const TSubvariants &	CSequenceVariant_Base::GetSubvariants (void) const
	Get the Subvariants member data. More...
TSubvariants &	CSequenceVariant_Base::SetSubvariants (void)
	Assign a value to Subvariants data member. More...
bool	CSequenceVariant_Base::IsSetComplex (void) const
	Check if a value has been assigned to Complex data member. More...
bool	CSequenceVariant_Base::CanGetComplex (void) const
	Check if it is safe to call GetComplex method. More...
void	CSequenceVariant_Base::ResetComplex (void)
	Reset Complex data member. More...
TComplex	CSequenceVariant_Base::GetComplex (void) const
	Get the Complex member data. More...
void	CSequenceVariant_Base::SetComplex (TComplex value)
	Assign a value to Complex data member. More...
TComplex &	CSequenceVariant_Base::SetComplex (void)
	Assign a value to Complex data member. More...
virtual void	CSequenceVariant_Base::Reset (void)
	Reset the whole object. More...
	CSequenceVariant_Base::CSequenceVariant_Base (const CSequenceVariant_Base &)
CSequenceVariant_Base &	CSequenceVariant_Base::operator= (const CSequenceVariant_Base &)
	CSimpleVariant::CSimpleVariant (void)
	CSimpleVariant::~CSimpleVariant (void)
	CSimpleVariant::CSimpleVariant (const CSimpleVariant &value)
CSimpleVariant &	CSimpleVariant::operator= (const CSimpleVariant &value)
	CSimpleVariant_Base::CSimpleVariant_Base (void)
virtual	CSimpleVariant_Base::~CSimpleVariant_Base (void)
	CSimpleVariant_Base::DECLARE_INTERNAL_TYPE_INFO ()
	CSimpleVariant_Base::C_Type::C_Type (void)
	CSimpleVariant_Base::C_Type::~C_Type (void)
	CSimpleVariant_Base::C_Type::DECLARE_INTERNAL_TYPE_INFO ()
void	CSimpleVariant_Base::C_Type::Reset (void)
	Reset the whole object. More...
void	CSimpleVariant_Base::C_Type::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CSimpleVariant_Base::C_Type::Which (void) const
	Which variant is currently selected. More...
void	CSimpleVariant_Base::C_Type::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CSimpleVariant_Base::C_Type::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CSimpleVariant_Base::C_Type::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CSimpleVariant_Base::C_Type::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CSimpleVariant_Base::C_Type::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CSimpleVariant_Base::C_Type::IsNa_identity (void) const
	Check if variant Na_identity is selected. More...
const TNa_identity &	CSimpleVariant_Base::C_Type::GetNa_identity (void) const
	Get the variant data. More...
TNa_identity &	CSimpleVariant_Base::C_Type::SetNa_identity (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetNa_identity (TNa_identity &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsNa_sub (void) const
	Check if variant Na_sub is selected. More...
const TNa_sub &	CSimpleVariant_Base::C_Type::GetNa_sub (void) const
	Get the variant data. More...
TNa_sub &	CSimpleVariant_Base::C_Type::SetNa_sub (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetNa_sub (TNa_sub &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsProt_sub (void) const
	Check if variant Prot_sub is selected. More...
const TProt_sub &	CSimpleVariant_Base::C_Type::GetProt_sub (void) const
	Get the variant data. More...
TProt_sub &	CSimpleVariant_Base::C_Type::SetProt_sub (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetProt_sub (TProt_sub &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsProt_silent (void) const
	Check if variant Prot_silent is selected. More...
const TProt_silent &	CSimpleVariant_Base::C_Type::GetProt_silent (void) const
	Get the variant data. More...
TProt_silent &	CSimpleVariant_Base::C_Type::SetProt_silent (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetProt_silent (TProt_silent &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsDel (void) const
	Check if variant Del is selected. More...
const TDel &	CSimpleVariant_Base::C_Type::GetDel (void) const
	Get the variant data. More...
TDel &	CSimpleVariant_Base::C_Type::SetDel (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetDel (TDel &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsDup (void) const
	Check if variant Dup is selected. More...
const TDup &	CSimpleVariant_Base::C_Type::GetDup (void) const
	Get the variant data. More...
TDup &	CSimpleVariant_Base::C_Type::SetDup (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetDup (TDup &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsInv (void) const
	Check if variant Inv is selected. More...
const TInv &	CSimpleVariant_Base::C_Type::GetInv (void) const
	Get the variant data. More...
TInv &	CSimpleVariant_Base::C_Type::SetInv (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetInv (TInv &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsIns (void) const
	Check if variant Ins is selected. More...
const TIns &	CSimpleVariant_Base::C_Type::GetIns (void) const
	Get the variant data. More...
TIns &	CSimpleVariant_Base::C_Type::SetIns (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetIns (TIns &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsConv (void) const
	Check if variant Conv is selected. More...
const TConv &	CSimpleVariant_Base::C_Type::GetConv (void) const
	Get the variant data. More...
TConv &	CSimpleVariant_Base::C_Type::SetConv (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetConv (TConv &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsDelins (void) const
	Check if variant Delins is selected. More...
const TDelins &	CSimpleVariant_Base::C_Type::GetDelins (void) const
	Get the variant data. More...
TDelins &	CSimpleVariant_Base::C_Type::SetDelins (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetDelins (TDelins &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsRepeat (void) const
	Check if variant Repeat is selected. More...
const TRepeat &	CSimpleVariant_Base::C_Type::GetRepeat (void) const
	Get the variant data. More...
TRepeat &	CSimpleVariant_Base::C_Type::SetRepeat (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetRepeat (TRepeat &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsProt_ext (void) const
	Check if variant Prot_ext is selected. More...
const TProt_ext &	CSimpleVariant_Base::C_Type::GetProt_ext (void) const
	Get the variant data. More...
TProt_ext &	CSimpleVariant_Base::C_Type::SetProt_ext (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetProt_ext (TProt_ext &value)
	Select the variant and set its data. More...
bool	CSimpleVariant_Base::C_Type::IsFrameshift (void) const
	Check if variant Frameshift is selected. More...
const TFrameshift &	CSimpleVariant_Base::C_Type::GetFrameshift (void) const
	Get the variant data. More...
TFrameshift &	CSimpleVariant_Base::C_Type::SetFrameshift (void)
	Select the variant. More...
void	CSimpleVariant_Base::C_Type::SetFrameshift (TFrameshift &value)
	Select the variant and set its data. More...
	CSimpleVariant_Base::C_Type::C_Type (const C_Type &)
C_Type &	CSimpleVariant_Base::C_Type::operator= (const C_Type &)
void	CSimpleVariant_Base::C_Type::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
bool	CSimpleVariant_Base::IsSetType (void) const
	Check if a value has been assigned to Type data member. More...
bool	CSimpleVariant_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CSimpleVariant_Base::ResetType (void)
	Reset Type data member. More...
const TType &	CSimpleVariant_Base::GetType (void) const
	Get the Type member data. More...
void	CSimpleVariant_Base::SetType (TType &value)
	Assign a value to Type data member. More...
TType &	CSimpleVariant_Base::SetType (void)
	Assign a value to Type data member. More...
bool	CSimpleVariant_Base::IsSetFuzzy (void) const
	Check if a value has been assigned to Fuzzy data member. More...
bool	CSimpleVariant_Base::CanGetFuzzy (void) const
	Check if it is safe to call GetFuzzy method. More...
void	CSimpleVariant_Base::ResetFuzzy (void)
	Reset Fuzzy data member. More...
void	CSimpleVariant_Base::SetDefaultFuzzy (void)
	Assign default value to Fuzzy data member. More...
TFuzzy	CSimpleVariant_Base::GetFuzzy (void) const
	Get the Fuzzy member data. More...
void	CSimpleVariant_Base::SetFuzzy (TFuzzy value)
	Assign a value to Fuzzy data member. More...
TFuzzy &	CSimpleVariant_Base::SetFuzzy (void)
	Assign a value to Fuzzy data member. More...
virtual void	CSimpleVariant_Base::Reset (void)
	Reset the whole object. More...
	CSimpleVariant_Base::CSimpleVariant_Base (const CSimpleVariant_Base &)
CSimpleVariant_Base &	CSimpleVariant_Base::operator= (const CSimpleVariant_Base &)
	CSimpleVariantSeq::CSimpleVariantSeq (void)
	CSimpleVariantSeq::~CSimpleVariantSeq (void)
	CSimpleVariantSeq::CSimpleVariantSeq (const CSimpleVariantSeq &value)
CSimpleVariantSeq &	CSimpleVariantSeq::operator= (const CSimpleVariantSeq &value)
	CSimpleVariantSeq_Base::CSimpleVariantSeq_Base (void)
virtual	CSimpleVariantSeq_Base::~CSimpleVariantSeq_Base (void)
	CSimpleVariantSeq_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CSimpleVariantSeq_Base::IsSetVariants (void) const
	Check if a value has been assigned to Variants data member. More...
bool	CSimpleVariantSeq_Base::CanGetVariants (void) const
	Check if it is safe to call GetVariants method. More...
void	CSimpleVariantSeq_Base::ResetVariants (void)
	Reset Variants data member. More...
const TVariants &	CSimpleVariantSeq_Base::GetVariants (void) const
	Get the Variants member data. More...
TVariants &	CSimpleVariantSeq_Base::SetVariants (void)
	Assign a value to Variants data member. More...
bool	CSimpleVariantSeq_Base::IsSetSisters (void) const
	Check if a value has been assigned to Sisters data member. More...
bool	CSimpleVariantSeq_Base::CanGetSisters (void) const
	Check if it is safe to call GetSisters method. More...
void	CSimpleVariantSeq_Base::ResetSisters (void)
	Reset Sisters data member. More...
void	CSimpleVariantSeq_Base::SetDefaultSisters (void)
	Assign default value to Sisters data member. More...
TSisters	CSimpleVariantSeq_Base::GetSisters (void) const
	Get the Sisters member data. More...
void	CSimpleVariantSeq_Base::SetSisters (TSisters value)
	Assign a value to Sisters data member. More...
TSisters &	CSimpleVariantSeq_Base::SetSisters (void)
	Assign a value to Sisters data member. More...
bool	CSimpleVariantSeq_Base::IsSetFuzzy (void) const
	Check if a value has been assigned to Fuzzy data member. More...
bool	CSimpleVariantSeq_Base::CanGetFuzzy (void) const
	Check if it is safe to call GetFuzzy method. More...
void	CSimpleVariantSeq_Base::ResetFuzzy (void)
	Reset Fuzzy data member. More...
void	CSimpleVariantSeq_Base::SetDefaultFuzzy (void)
	Assign default value to Fuzzy data member. More...
TFuzzy	CSimpleVariantSeq_Base::GetFuzzy (void) const
	Get the Fuzzy member data. More...
void	CSimpleVariantSeq_Base::SetFuzzy (TFuzzy value)
	Assign a value to Fuzzy data member. More...
TFuzzy &	CSimpleVariantSeq_Base::SetFuzzy (void)
	Assign a value to Fuzzy data member. More...
virtual void	CSimpleVariantSeq_Base::Reset (void)
	Reset the whole object. More...
	CSimpleVariantSeq_Base::CSimpleVariantSeq_Base (const CSimpleVariantSeq_Base &)
CSimpleVariantSeq_Base &	CSimpleVariantSeq_Base::operator= (const CSimpleVariantSeq_Base &)
	CSubsequence::CSubsequence (void)
	CSubsequence::~CSubsequence (void)
	CSubsequence::CSubsequence (const CSubsequence &value)
CSubsequence &	CSubsequence::operator= (const CSubsequence &value)
	CSubsequence_Base::CSubsequence_Base (void)
virtual	CSubsequence_Base::~CSubsequence_Base (void)
	CSubsequence_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CSubsequence_Base::IsSetIdentifier (void) const
	For example, an accession id Check if a value has been assigned to Identifier data member. More...
bool	CSubsequence_Base::CanGetIdentifier (void) const
	Check if it is safe to call GetIdentifier method. More...
void	CSubsequence_Base::ResetIdentifier (void)
	Reset Identifier data member. More...
const TIdentifier &	CSubsequence_Base::GetIdentifier (void) const
	Get the Identifier member data. More...
void	CSubsequence_Base::SetIdentifier (const TIdentifier &value)
	Assign a value to Identifier data member. More...
void	CSubsequence_Base::SetIdentifier (TIdentifier &&value)
TIdentifier &	CSubsequence_Base::SetIdentifier (void)
	Assign a value to Identifier data member. More...
bool	CSubsequence_Base::IsSetType (void) const
	Check if a value has been assigned to Type data member. More...
bool	CSubsequence_Base::CanGetType (void) const
	Check if it is safe to call GetType method. More...
void	CSubsequence_Base::ResetType (void)
	Reset Type data member. More...
TType	CSubsequence_Base::GetType (void) const
	Get the Type member data. More...
void	CSubsequence_Base::SetType (TType value)
	Assign a value to Type data member. More...
TType &	CSubsequence_Base::SetType (void)
	Assign a value to Type data member. More...
bool	CSubsequence_Base::IsSetInt (void) const
	Check if a value has been assigned to Int data member. More...
bool	CSubsequence_Base::CanGetInt (void) const
	Check if it is safe to call GetInt method. More...
void	CSubsequence_Base::ResetInt (void)
	Reset Int data member. More...
const TInt &	CSubsequence_Base::GetInt (void) const
	Get the Int member data. More...
void	CSubsequence_Base::SetInt (TInt &value)
	Assign a value to Int data member. More...
TInt &	CSubsequence_Base::SetInt (void)
	Assign a value to Int data member. More...
virtual void	CSubsequence_Base::Reset (void)
	Reset the whole object. More...
	CSubsequence_Base::CSubsequence_Base (const CSubsequence_Base &)
CSubsequence_Base &	CSubsequence_Base::operator= (const CSubsequence_Base &)
	CVariant::CVariant (void)
	CVariant::~CVariant (void)
	CVariant::CVariant (const CVariant &value)
CVariant &	CVariant::operator= (const CVariant &value)
	CVariant_Base::CVariant_Base (void)
virtual	CVariant_Base::~CVariant_Base (void)
	CVariant_Base::DECLARE_INTERNAL_TYPE_INFO ()
virtual void	CVariant_Base::Reset (void)
	Reset the whole object. More...
virtual void	CVariant_Base::ResetSelection (void)
	Reset the selection (set it to e_not_set). More...
E_Choice	CVariant_Base::Which (void) const
	Which variant is currently selected. More...
void	CVariant_Base::CheckSelected (E_Choice index) const
	Verify selection, throw exception if it differs from the expected. More...
void	CVariant_Base::ThrowInvalidSelection (E_Choice index) const
	Throw 'InvalidSelection' exception. More...
static string	CVariant_Base::SelectionName (E_Choice index)
	Retrieve selection name (for diagnostic purposes). More...
void	CVariant_Base::Select (E_Choice index, EResetVariant reset=eDoResetVariant)
	Select the requested variant if needed. More...
void	CVariant_Base::Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)
	Select the requested variant if needed, allocating CObject variants from memory pool. More...
bool	CVariant_Base::IsSimple (void) const
	Check if variant Simple is selected. More...
const TSimple &	CVariant_Base::GetSimple (void) const
	Get the variant data. More...
TSimple &	CVariant_Base::SetSimple (void)
	Select the variant. More...
void	CVariant_Base::SetSimple (TSimple &value)
	Select the variant and set its data. More...
bool	CVariant_Base::IsSpecial (void) const
	Check if variant Special is selected. More...
TSpecial	CVariant_Base::GetSpecial (void) const
	Get the variant data. More...
TSpecial &	CVariant_Base::SetSpecial (void)
	Select the variant. More...
void	CVariant_Base::SetSpecial (TSpecial value)
	Select the variant and set its data. More...
	CVariant_Base::CVariant_Base (const CVariant_Base &)
CVariant_Base &	CVariant_Base::operator= (const CVariant_Base &)
void	CVariant_Base::DoSelect (E_Choice index, CObjectMemoryPool *pool=0)
	CVariantExpression::CVariantExpression (void)
	CVariantExpression::~CVariantExpression (void)
	CVariantExpression::CVariantExpression (const CVariantExpression &value)
CVariantExpression &	CVariantExpression::operator= (const CVariantExpression &value)
	CVariantExpression_Base::CVariantExpression_Base (void)
virtual	CVariantExpression_Base::~CVariantExpression_Base (void)
	CVariantExpression_Base::DECLARE_INTERNAL_TYPE_INFO ()
bool	CVariantExpression_Base::IsSetInput_expr (void) const
	contains the input expression to be parsed Check if a value has been assigned to Input_expr data member. More...
bool	CVariantExpression_Base::CanGetInput_expr (void) const
	Check if it is safe to call GetInput_expr method. More...
void	CVariantExpression_Base::ResetInput_expr (void)
	Reset Input_expr data member. More...
const TInput_expr &	CVariantExpression_Base::GetInput_expr (void) const
	Get the Input_expr member data. More...
void	CVariantExpression_Base::SetInput_expr (const TInput_expr &value)
	Assign a value to Input_expr data member. More...
void	CVariantExpression_Base::SetInput_expr (TInput_expr &&value)
TInput_expr &	CVariantExpression_Base::SetInput_expr (void)
	Assign a value to Input_expr data member. More...
bool	CVariantExpression_Base::IsSetReference_id (void) const
	contains the accession id or other identifier for the reference sequence Check if a value has been assigned to Reference_id data member. More...
bool	CVariantExpression_Base::CanGetReference_id (void) const
	Check if it is safe to call GetReference_id method. More...
void	CVariantExpression_Base::ResetReference_id (void)
	Reset Reference_id data member. More...
const TReference_id &	CVariantExpression_Base::GetReference_id (void) const
	Get the Reference_id member data. More...
void	CVariantExpression_Base::SetReference_id (const TReference_id &value)
	Assign a value to Reference_id data member. More...
void	CVariantExpression_Base::SetReference_id (TReference_id &&value)
TReference_id &	CVariantExpression_Base::SetReference_id (void)
	Assign a value to Reference_id data member. More...
bool	CVariantExpression_Base::IsSetSequence_variant (void) const
	Check if a value has been assigned to Sequence_variant data member. More...
bool	CVariantExpression_Base::CanGetSequence_variant (void) const
	Check if it is safe to call GetSequence_variant method. More...
void	CVariantExpression_Base::ResetSequence_variant (void)
	Reset Sequence_variant data member. More...
const TSequence_variant &	CVariantExpression_Base::GetSequence_variant (void) const
	Get the Sequence_variant member data. More...
void	CVariantExpression_Base::SetSequence_variant (TSequence_variant &value)
	Assign a value to Sequence_variant data member. More...
TSequence_variant &	CVariantExpression_Base::SetSequence_variant (void)
	Assign a value to Sequence_variant data member. More...
virtual void	CVariantExpression_Base::Reset (void)
	Reset the whole object. More...
	CVariantExpression_Base::CVariantExpression_Base (const CVariantExpression_Base &)
CVariantExpression_Base &	CVariantExpression_Base::operator= (const CVariantExpression_Base &)

Variables
Uint4	CAaInterval_Base::m_set_State [1]
CRef< TStart >	CAaInterval_Base::m_Start
CRef< TStop >	CAaInterval_Base::m_Stop
E_Choice	CAaLocation_Base::m_choice
static const char *const	CAaLocation_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CAaLocation_Base::m_object
Uint4	CAaSite_Base::m_set_State [1]
TSeqPos	CAaSite_Base::m_Index
string	CAaSite_Base::m_Aa
Uint4	CAaSiteRange_Base::m_set_State [1]
CRef< TStart >	CAaSiteRange_Base::m_Start
CRef< TStop >	CAaSiteRange_Base::m_Stop
Uint4	CConversion_Base::m_set_State [1]
CRef< TLoc >	CConversion_Base::m_Loc
CRef< TOrigin >	CConversion_Base::m_Origin
E_Choice	CCount_Base::C_Range::C_Start::m_choice
static const char *const	CCount_Base::C_Range::C_Start::sm_SelectionNames []
TVal   CCount_Base::C_Range::C_Start::m_Val
union {
TVal   CCount_Base::C_Range::C_Start::m_Val
};
E_Choice	CCount_Base::C_Range::C_Stop::m_choice
static const char *const	CCount_Base::C_Range::C_Stop::sm_SelectionNames []
TVal   CCount_Base::C_Range::C_Stop::m_Val
union {
TVal   CCount_Base::C_Range::C_Stop::m_Val
};
Uint4	CCount_Base::C_Range::m_set_State [1]
CRef< TStart >	CCount_Base::C_Range::m_Start
CRef< TStop >	CCount_Base::C_Range::m_Stop
E_Choice	CCount_Base::m_choice
static const char *const	CCount_Base::sm_SelectionNames []
TVal   CCount_Base::m_Val
TFuzzy_val   CCount_Base::m_Fuzzy_val
NCBI_NS_NCBI::CSerialObject *   CCount_Base::m_object
union {
TVal   CCount_Base::m_Val
TFuzzy_val   CCount_Base::m_Fuzzy_val
NCBI_NS_NCBI::CSerialObject *   CCount_Base::m_object
};
Uint4	CCtermExtension_Base::m_set_State [1]
int	CCtermExtension_Base::m_RefStop
string	CCtermExtension_Base::m_NewAa
CRef< TLength >	CCtermExtension_Base::m_Length
Uint4	CDeletion_Base::m_set_State [1]
CRef< TLoc >	CDeletion_Base::m_Loc
string	CDeletion_Base::m_Raw_seq
E_Choice	CDelins_Base::C_Inserted_seq_info::m_choice
static const char *const	CDelins_Base::C_Inserted_seq_info::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CDelins_Base::C_Inserted_seq_info::m_string
NCBI_NS_NCBI::CSerialObject *   CDelins_Base::C_Inserted_seq_info::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CDelins_Base::C_Inserted_seq_info::m_string
NCBI_NS_NCBI::CSerialObject *   CDelins_Base::C_Inserted_seq_info::m_object
};
Uint4	CDelins_Base::m_set_State [1]
CRef< TLoc >	CDelins_Base::m_Loc
string	CDelins_Base::m_Deleted_raw_seq
CRef< TInserted_seq_info >	CDelins_Base::m_Inserted_seq_info
Uint4	CDuplication_Base::m_set_State [1]
CRef< TLoc >	CDuplication_Base::m_Loc
string	CDuplication_Base::m_Raw_seq
E_Choice	CFrameshift_Base::m_choice
static const char *const	CFrameshift_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *   CFrameshift_Base::m_object
union {
NCBI_NS_NCBI::CSerialObject *   CFrameshift_Base::m_object
};
E_Choice	CInsertion_Base::C_Seqinfo::m_choice
static const char *const	CInsertion_Base::C_Seqinfo::sm_SelectionNames []
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CInsertion_Base::C_Seqinfo::m_string
NCBI_NS_NCBI::CSerialObject *   CInsertion_Base::C_Seqinfo::m_object
union {
NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string >   CInsertion_Base::C_Seqinfo::m_string
NCBI_NS_NCBI::CSerialObject *   CInsertion_Base::C_Seqinfo::m_object
};
Uint4	CInsertion_Base::m_set_State [1]
CRef< TInt >	CInsertion_Base::m_Int
CRef< TSeqinfo >	CInsertion_Base::m_Seqinfo
Uint4	CInversion_Base::m_set_State [1]
CRef< TNtint >	CInversion_Base::m_Ntint
string	CInversion_Base::m_Raw_seq
int	CInversion_Base::m_Size
Uint4	CNaIdentity_Base::m_set_State [1]
CRef< TLoc >	CNaIdentity_Base::m_Loc
string	CNaIdentity_Base::m_Nucleotide
Uint4	CNaSub_Base::m_set_State [1]
CRef< TLoc >	CNaSub_Base::m_Loc
string	CNaSub_Base::m_Initial
string	CNaSub_Base::m_Final
Uint4	CNtermExtension_Base::m_set_State [1]
CRef< TNewStart >	CNtermExtension_Base::m_NewStart
string	CNtermExtension_Base::m_NewAa
Uint4	CNtInterval_Base::m_set_State [1]
CRef< TStart >	CNtInterval_Base::m_Start
CRef< TStop >	CNtInterval_Base::m_Stop
E_Choice	CNtIntLimit_Base::m_choice
static const char *const	CNtIntLimit_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CNtIntLimit_Base::m_object
E_Choice	CNtLocation_Base::m_choice
static const char *const	CNtLocation_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CNtLocation_Base::m_object
E_Choice	CNtSite_Base::C_Base::m_choice
static const char *const	CNtSite_Base::C_Base::sm_SelectionNames []
TVal   CNtSite_Base::C_Base::m_Val
union {
TVal   CNtSite_Base::C_Base::m_Val
};
E_Choice	CNtSite_Base::C_Offset::m_choice
static const char *const	CNtSite_Base::C_Offset::sm_SelectionNames []
TVal   CNtSite_Base::C_Offset::m_Val
union {
TVal   CNtSite_Base::C_Offset::m_Val
};
E_Choice	CNtSite_Base::C_Utr::m_choice
static const char *const	CNtSite_Base::C_Utr::sm_SelectionNames []
Uint4	CNtSite_Base::m_set_State [1]
string	CNtSite_Base::m_Seqid
int	CNtSite_Base::m_Seqtype
CRef< TBase >	CNtSite_Base::m_Base
CRef< TOffset >	CNtSite_Base::m_Offset
CRef< TUtr >	CNtSite_Base::m_Utr
bool	CNtSite_Base::m_Strand_minus
bool	CNtSite_Base::m_Fuzzy
bool	CNtSite_Base::m_Fuzzy_offset
Uint4	CNtSiteRange_Base::m_set_State [1]
CRef< TStart >	CNtSiteRange_Base::m_Start
CRef< TStop >	CNtSiteRange_Base::m_Stop
E_Choice	CProteinExtension_Base::m_choice
static const char *const	CProteinExtension_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CProteinExtension_Base::m_object
Uint4	CProteinSub_Base::m_set_State [1]
int	CProteinSub_Base::m_Type
CRef< TInitial >	CProteinSub_Base::m_Initial
string	CProteinSub_Base::m_Final
Uint4	CRepeat_Base::m_set_State [1]
CRef< TLoc >	CRepeat_Base::m_Loc
CRef< TCount >	CRepeat_Base::m_Count
string	CRepeat_Base::m_Raw_seq
E_Choice	CSeqInterval_Base::m_choice
static const char *const	CSeqInterval_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CSeqInterval_Base::m_object
E_Choice	CSeqLocation_Base::m_choice
static const char *const	CSeqLocation_Base::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CSeqLocation_Base::m_object
Uint4	CSequenceVariant_Base::m_set_State [1]
int	CSequenceVariant_Base::m_Seqtype
list< CRef< CVariant > >	CSequenceVariant_Base::m_Subvariants
int	CSequenceVariant_Base::m_Complex
E_Choice	CSimpleVariant_Base::C_Type::m_choice
static const char *const	CSimpleVariant_Base::C_Type::sm_SelectionNames []
NCBI_NS_NCBI::CSerialObject *	CSimpleVariant_Base::C_Type::m_object
Uint4	CSimpleVariant_Base::m_set_State [1]
CRef< TType >	CSimpleVariant_Base::m_Type
bool	CSimpleVariant_Base::m_Fuzzy
Uint4	CSimpleVariantSeq_Base::m_set_State [1]
list< CRef< CSimpleVariant > >	CSimpleVariantSeq_Base::m_Variants
bool	CSimpleVariantSeq_Base::m_Sisters
bool	CSimpleVariantSeq_Base::m_Fuzzy
Uint4	CSubsequence_Base::m_set_State [1]
string	CSubsequence_Base::m_Identifier
int	CSubsequence_Base::m_Type
CRef< TInt >	CSubsequence_Base::m_Int
E_Choice	CVariant_Base::m_choice
static const char *const	CVariant_Base::sm_SelectionNames []
TSpecial   CVariant_Base::m_Special
NCBI_NS_NCBI::CSerialObject *   CVariant_Base::m_object
union {
TSpecial   CVariant_Base::m_Special
NCBI_NS_NCBI::CSerialObject *   CVariant_Base::m_object
};
Uint4	CVariantExpression_Base::m_set_State [1]
string	CVariantExpression_Base::m_Input_expr
string	CVariantExpression_Base::m_Reference_id
CRef< TSequence_variant >	CVariantExpression_Base::m_Sequence_variant

Detailed Description

Typedef Documentation

TAa

typedef string CAaSite_Base::TAa

Definition at line 86 of file AaSite_.hpp.

TAaint

typedef CAaInterval CSeqInterval_Base::TAaint

Definition at line 145 of file SeqInterval_.hpp.

TAaloc

typedef CAaLocation CSeqLocation_Base::TAaloc

Definition at line 145 of file SeqLocation_.hpp.

TAasite

typedef CAaSite CFrameshift_Base::TAasite

Definition at line 144 of file Frameshift_.hpp.

TBase

typedef C_Base CNtSite_Base::TBase

Definition at line 488 of file NtSite_.hpp.

TComplex

typedef int CSequenceVariant_Base::TComplex

Definition at line 100 of file SequenceVariant_.hpp.

TConv

typedef CConversion CSimpleVariant_Base::C_Type::TConv

Definition at line 192 of file SimpleVariant_.hpp.

TCount [1/3]

typedef CCount CDelins_Base::C_Inserted_seq_info::TCount

Definition at line 171 of file Delins_.hpp.

TCount [2/3]

typedef CCount CInsertion_Base::C_Seqinfo::TCount

Definition at line 171 of file Insertion_.hpp.

TCount [3/3]

typedef CCount CRepeat_Base::TCount

Definition at line 91 of file Repeat_.hpp.

TCterm_ext

typedef CCtermExtension CProteinExtension_Base::TCterm_ext

Definition at line 146 of file ProteinExtension_.hpp.

TDel

typedef CDeletion CSimpleVariant_Base::C_Type::TDel

Definition at line 188 of file SimpleVariant_.hpp.

TDeleted_raw_seq

typedef string CDelins_Base::TDeleted_raw_seq

Definition at line 302 of file Delins_.hpp.

TDelins

typedef CDelins CSimpleVariant_Base::C_Type::TDelins

Definition at line 193 of file SimpleVariant_.hpp.

TDup

typedef CDuplication CSimpleVariant_Base::C_Type::TDup

Definition at line 189 of file SimpleVariant_.hpp.

TFinal [1/2]

typedef string CNaSub_Base::TFinal

Definition at line 91 of file NaSub_.hpp.

TFinal [2/2]

typedef string CProteinSub_Base::TFinal

Definition at line 100 of file ProteinSub_.hpp.

TFrameshift

typedef CFrameshift CSimpleVariant_Base::C_Type::TFrameshift

Definition at line 196 of file SimpleVariant_.hpp.

TFuzzy [1/3]

typedef bool CNtSite_Base::TFuzzy

Definition at line 492 of file NtSite_.hpp.

TFuzzy [2/3]

typedef bool CSimpleVariant_Base::TFuzzy

Definition at line 555 of file SimpleVariant_.hpp.

TFuzzy [3/3]

typedef bool CSimpleVariantSeq_Base::TFuzzy

Definition at line 92 of file SimpleVariantSeq_.hpp.

TFuzzy_offset

typedef bool CNtSite_Base::TFuzzy_offset

Definition at line 493 of file NtSite_.hpp.

TFuzzy_val

typedef TSeqPos CCount_Base::TFuzzy_val

Definition at line 535 of file Count_.hpp.

TIdentifier [1/3]

typedef string CDelins_Base::C_Inserted_seq_info::TIdentifier

Definition at line 169 of file Delins_.hpp.

TIdentifier [2/3]

typedef string CInsertion_Base::C_Seqinfo::TIdentifier

Definition at line 169 of file Insertion_.hpp.

TIdentifier [3/3]

typedef string CSubsequence_Base::TIdentifier

Definition at line 90 of file Subsequence_.hpp.

TIndex

typedef TSeqPos CAaSite_Base::TIndex

Definition at line 85 of file AaSite_.hpp.

TInitial [1/2]

typedef string CNaSub_Base::TInitial

Definition at line 90 of file NaSub_.hpp.

TInitial [2/2]

typedef CAaSite CProteinSub_Base::TInitial

Definition at line 99 of file ProteinSub_.hpp.

TInput_expr

typedef string CVariantExpression_Base::TInput_expr

Definition at line 90 of file VariantExpression_.hpp.

TIns

typedef CInsertion CSimpleVariant_Base::C_Type::TIns

Definition at line 191 of file SimpleVariant_.hpp.

TInserted_seq_info

typedef C_Inserted_seq_info CDelins_Base::TInserted_seq_info

Definition at line 303 of file Delins_.hpp.

TInt [1/4]

typedef CAaInterval CAaLocation_Base::TInt

Definition at line 149 of file AaLocation_.hpp.

TInt [2/4]

typedef CSeqInterval CInsertion_Base::TInt

Definition at line 301 of file Insertion_.hpp.

TInt [3/4]

typedef CNtInterval CNtLocation_Base::TInt

Definition at line 149 of file NtLocation_.hpp.

TInt [4/4]

typedef CSeqInterval CSubsequence_Base::TInt

Definition at line 92 of file Subsequence_.hpp.

TInv

typedef CInversion CSimpleVariant_Base::C_Type::TInv

Definition at line 190 of file SimpleVariant_.hpp.

TLength

typedef CCount CCtermExtension_Base::TLength

Definition at line 91 of file CtermExtension_.hpp.

TLoc [1/7]

typedef CNtLocation CConversion_Base::TLoc

Definition at line 85 of file Conversion_.hpp.

TLoc [2/7]

typedef CSeqLocation CDeletion_Base::TLoc

Definition at line 89 of file Deletion_.hpp.

TLoc [3/7]

typedef CSeqLocation CDelins_Base::TLoc

Definition at line 301 of file Delins_.hpp.

TLoc [4/7]

typedef CSeqLocation CDuplication_Base::TLoc

Definition at line 89 of file Duplication_.hpp.

TLoc [5/7]

typedef CNtLocation CNaIdentity_Base::TLoc

Definition at line 89 of file NaIdentity_.hpp.

TLoc [6/7]

typedef CNtLocation CNaSub_Base::TLoc

Definition at line 89 of file NaSub_.hpp.

TLoc [7/7]

typedef CSeqLocation CRepeat_Base::TLoc

Definition at line 90 of file Repeat_.hpp.

TmemberIndex [1/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CAaInterval_Base::TmemberIndex

Definition at line 94 of file AaInterval_.hpp.

TmemberIndex [2/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CAaSite_Base::TmemberIndex

Definition at line 94 of file AaSite_.hpp.

TmemberIndex [3/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CAaSiteRange_Base::TmemberIndex

Definition at line 94 of file AaSiteRange_.hpp.

TmemberIndex [4/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CConversion_Base::TmemberIndex

Definition at line 94 of file Conversion_.hpp.

TmemberIndex [5/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CCount_Base::C_Range::TmemberIndex

Definition at line 379 of file Count_.hpp.

TmemberIndex [6/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CCtermExtension_Base::TmemberIndex

Definition at line 100 of file CtermExtension_.hpp.

TmemberIndex [7/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CDeletion_Base::TmemberIndex

Definition at line 98 of file Deletion_.hpp.

TmemberIndex [8/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CDelins_Base::TmemberIndex

Definition at line 312 of file Delins_.hpp.

TmemberIndex [9/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CDuplication_Base::TmemberIndex

Definition at line 98 of file Duplication_.hpp.

TmemberIndex [10/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CInsertion_Base::TmemberIndex

Definition at line 310 of file Insertion_.hpp.

TmemberIndex [11/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CInversion_Base::TmemberIndex

Definition at line 100 of file Inversion_.hpp.

TmemberIndex [12/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNaIdentity_Base::TmemberIndex

Definition at line 98 of file NaIdentity_.hpp.

TmemberIndex [13/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CNaSub_Base::TmemberIndex

Definition at line 100 of file NaSub_.hpp.

TmemberIndex [14/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNtermExtension_Base::TmemberIndex

Definition at line 98 of file NtermExtension_.hpp.

TmemberIndex [15/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNtInterval_Base::TmemberIndex

Definition at line 94 of file NtInterval_.hpp.

TmemberIndex [16/24]

typedef Tparent::CMemberIndex<E_memberIndex, 9> CNtSite_Base::TmemberIndex

Definition at line 507 of file NtSite_.hpp.

TmemberIndex [17/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CNtSiteRange_Base::TmemberIndex

Definition at line 94 of file NtSiteRange_.hpp.

TmemberIndex [18/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CProteinSub_Base::TmemberIndex

Definition at line 109 of file ProteinSub_.hpp.

TmemberIndex [19/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CRepeat_Base::TmemberIndex

Definition at line 101 of file Repeat_.hpp.

TmemberIndex [20/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CSequenceVariant_Base::TmemberIndex

Definition at line 109 of file SequenceVariant_.hpp.

TmemberIndex [21/24]

typedef Tparent::CMemberIndex<E_memberIndex, 3> CSimpleVariant_Base::TmemberIndex

Definition at line 563 of file SimpleVariant_.hpp.

TmemberIndex [22/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CSimpleVariantSeq_Base::TmemberIndex

Definition at line 101 of file SimpleVariantSeq_.hpp.

TmemberIndex [23/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CSubsequence_Base::TmemberIndex

Definition at line 101 of file Subsequence_.hpp.

TmemberIndex [24/24]

typedef Tparent::CMemberIndex<E_memberIndex, 4> CVariantExpression_Base::TmemberIndex

Definition at line 101 of file VariantExpression_.hpp.

TNa_identity

typedef CNaIdentity CSimpleVariant_Base::C_Type::TNa_identity

Definition at line 184 of file SimpleVariant_.hpp.

TNa_sub

typedef CNaSub CSimpleVariant_Base::C_Type::TNa_sub

Definition at line 185 of file SimpleVariant_.hpp.

TNewAa [1/2]

typedef string CCtermExtension_Base::TNewAa

Definition at line 90 of file CtermExtension_.hpp.

TNewAa [2/2]

typedef string CNtermExtension_Base::TNewAa

Definition at line 90 of file NtermExtension_.hpp.

TNewStart

typedef CCount CNtermExtension_Base::TNewStart

Definition at line 89 of file NtermExtension_.hpp.

TNterm_ext

typedef CNtermExtension CProteinExtension_Base::TNterm_ext

Definition at line 145 of file ProteinExtension_.hpp.

TNtint [1/2]

typedef CNtInterval CInversion_Base::TNtint

Definition at line 89 of file Inversion_.hpp.

TNtint [2/2]

typedef CNtInterval CSeqInterval_Base::TNtint

Definition at line 146 of file SeqInterval_.hpp.

TNtloc

typedef CNtLocation CSeqLocation_Base::TNtloc

Definition at line 146 of file SeqLocation_.hpp.

TNucleotide

typedef string CNaIdentity_Base::TNucleotide

Definition at line 90 of file NaIdentity_.hpp.

TOffset

typedef C_Offset CNtSite_Base::TOffset

Definition at line 489 of file NtSite_.hpp.

TOrigin

typedef CNtLocation CConversion_Base::TOrigin

Definition at line 86 of file Conversion_.hpp.

Tparent [1/71]

typedef CSerialObject CAaInterval_Base::Tparent

private

Definition at line 74 of file AaInterval_.hpp.

Tparent [2/71]

typedef CSerialObject CAaLocation_Base::Tparent

private

Definition at line 76 of file AaLocation_.hpp.

Tparent [3/71]

typedef CAaSite_Base CAaSite::Tparent

private

Definition at line 67 of file AaSite.hpp.

Tparent [4/71]

typedef CSerialObject CAaSite_Base::Tparent

private

Definition at line 74 of file AaSite_.hpp.

Tparent [5/71]

typedef CAaSiteRange_Base CAaSiteRange::Tparent

private

Definition at line 67 of file AaSiteRange.hpp.

Tparent [6/71]

typedef CSerialObject CAaSiteRange_Base::Tparent

private

Definition at line 74 of file AaSiteRange_.hpp.

Tparent [7/71]

typedef CConversion_Base CConversion::Tparent

private

Definition at line 67 of file Conversion.hpp.

Tparent [8/71]

typedef CSerialObject CConversion_Base::Tparent

private

Definition at line 74 of file Conversion_.hpp.

Tparent [9/71]

typedef CCount_Base CCount::Tparent

private

Definition at line 67 of file Count.hpp.

Tparent [10/71]

typedef CSerialObject CCount_Base::Tparent

private

Definition at line 70 of file Count_.hpp.

Tparent [11/71]

typedef CSerialObject CCount_Base::C_Range::Tparent

private

Definition at line 87 of file Count_.hpp.

Tparent [12/71]

typedef CSerialObject CCount_Base::C_Range::C_Start::Tparent

private

Definition at line 104 of file Count_.hpp.

Tparent [13/71]

typedef CSerialObject CCount_Base::C_Range::C_Stop::Tparent

private

Definition at line 240 of file Count_.hpp.

Tparent [14/71]

typedef CCtermExtension_Base CCtermExtension::Tparent

private

Definition at line 67 of file CtermExtension.hpp.

Tparent [15/71]

typedef CSerialObject CCtermExtension_Base::Tparent

private

Definition at line 78 of file CtermExtension_.hpp.

Tparent [16/71]

typedef CDeletion_Base CDeletion::Tparent

private

Definition at line 67 of file Deletion.hpp.

Tparent [17/71]

typedef CSerialObject CDeletion_Base::Tparent

private

Definition at line 78 of file Deletion_.hpp.

Tparent [18/71]

typedef CDelins_Base CDelins::Tparent

private

Definition at line 67 of file Delins.hpp.

Tparent [19/71]

typedef CSerialObject CDelins_Base::Tparent

private

Definition at line 80 of file Delins_.hpp.

Tparent [20/71]

typedef CSerialObject CDelins_Base::C_Inserted_seq_info::Tparent

private

Definition at line 97 of file Delins_.hpp.

Tparent [21/71]

typedef CDuplication_Base CDuplication::Tparent

private

Definition at line 67 of file Duplication.hpp.

Tparent [22/71]

typedef CSerialObject CDuplication_Base::Tparent

private

Definition at line 78 of file Duplication_.hpp.

Tparent [23/71]

typedef CFrameshift_Base CFrameshift::Tparent

private

Definition at line 67 of file Frameshift.hpp.

Tparent [24/71]

typedef CSerialObject CFrameshift_Base::Tparent

private

Definition at line 74 of file Frameshift_.hpp.

Tparent [25/71]

typedef CInsertion_Base CInsertion::Tparent

private

Definition at line 67 of file Insertion.hpp.

Tparent [26/71]

typedef CSerialObject CInsertion_Base::Tparent

private

Definition at line 80 of file Insertion_.hpp.

Tparent [27/71]

typedef CSerialObject CInsertion_Base::C_Seqinfo::Tparent

private

Definition at line 97 of file Insertion_.hpp.

Tparent [28/71]

typedef CInversion_Base CInversion::Tparent

private

Definition at line 67 of file Inversion.hpp.

Tparent [29/71]

typedef CSerialObject CInversion_Base::Tparent

private

Definition at line 78 of file Inversion_.hpp.

Tparent [30/71]

typedef CNaIdentity_Base CNaIdentity::Tparent

private

Definition at line 67 of file NaIdentity.hpp.

Tparent [31/71]

typedef CSerialObject CNaIdentity_Base::Tparent

private

Definition at line 78 of file NaIdentity_.hpp.

Tparent [32/71]

typedef CNaSub_Base CNaSub::Tparent

private

Definition at line 67 of file NaSub.hpp.

Tparent [33/71]

typedef CSerialObject CNaSub_Base::Tparent

private

Definition at line 78 of file NaSub_.hpp.

Tparent [34/71]

typedef CNtermExtension_Base CNtermExtension::Tparent

private

Definition at line 67 of file NtermExtension.hpp.

Tparent [35/71]

typedef CSerialObject CNtermExtension_Base::Tparent

private

Definition at line 78 of file NtermExtension_.hpp.

Tparent [36/71]

typedef CNtInterval_Base CNtInterval::Tparent

private

Definition at line 67 of file NtInterval.hpp.

Tparent [37/71]

typedef CSerialObject CNtInterval_Base::Tparent

private

Definition at line 74 of file NtInterval_.hpp.

Tparent [38/71]

typedef CNtIntLimit_Base CNtIntLimit::Tparent

private

Definition at line 67 of file NtIntLimit.hpp.

Tparent [39/71]

typedef CSerialObject CNtIntLimit_Base::Tparent

private

Definition at line 75 of file NtIntLimit_.hpp.

Tparent [40/71]

typedef CNtLocation_Base CNtLocation::Tparent

private

Definition at line 67 of file NtLocation.hpp.

Tparent [41/71]

typedef CSerialObject CNtLocation_Base::Tparent

private

Definition at line 76 of file NtLocation_.hpp.

Tparent [42/71]

typedef CNtSite_Base CNtSite::Tparent

private

Definition at line 67 of file NtSite.hpp.

Tparent [43/71]

typedef CSerialObject CNtSite_Base::Tparent

private

Definition at line 75 of file NtSite_.hpp.

Tparent [44/71]

typedef CSerialObject CNtSite_Base::C_Base::Tparent

private

Definition at line 92 of file NtSite_.hpp.

Tparent [45/71]

typedef CSerialObject CNtSite_Base::C_Offset::Tparent

private

Definition at line 228 of file NtSite_.hpp.

Tparent [46/71]

typedef CSerialObject CNtSite_Base::C_Utr::Tparent

private

Definition at line 376 of file NtSite_.hpp.

Tparent [47/71]

typedef CNtSiteRange_Base CNtSiteRange::Tparent

private

Definition at line 67 of file NtSiteRange.hpp.

Tparent [48/71]

typedef CSerialObject CNtSiteRange_Base::Tparent

private

Definition at line 74 of file NtSiteRange_.hpp.

Tparent [49/71]

typedef CProteinExtension_Base CProteinExtension::Tparent

private

Definition at line 67 of file ProteinExtension.hpp.

Tparent [50/71]

typedef CSerialObject CProteinExtension_Base::Tparent

private

Definition at line 75 of file ProteinExtension_.hpp.

Tparent [51/71]

typedef CProteinSub_Base CProteinSub::Tparent

private

Definition at line 67 of file ProteinSub.hpp.

Tparent [52/71]

typedef CSerialObject CProteinSub_Base::Tparent

private

Definition at line 78 of file ProteinSub_.hpp.

Tparent [53/71]

typedef CRepeat_Base CRepeat::Tparent

private

Definition at line 67 of file Repeat.hpp.

Tparent [54/71]

typedef CSerialObject CRepeat_Base::Tparent

private

Definition at line 79 of file Repeat_.hpp.

Tparent [55/71]

typedef CSeqInterval_Base CSeqInterval::Tparent

private

Definition at line 67 of file SeqInterval.hpp.

Tparent [56/71]

typedef CSerialObject CSeqInterval_Base::Tparent

private

Definition at line 75 of file SeqInterval_.hpp.

Tparent [57/71]

typedef CSeqLocation_Base CSeqLocation::Tparent

private

Definition at line 67 of file SeqLocation.hpp.

Tparent [58/71]

typedef CSerialObject CSeqLocation_Base::Tparent

private

Definition at line 75 of file SeqLocation_.hpp.

Tparent [59/71]

typedef CSequenceVariant_Base CSequenceVariant::Tparent

private

Definition at line 67 of file SequenceVariant.hpp.

Tparent [60/71]

typedef CSerialObject CSequenceVariant_Base::Tparent

private

Definition at line 79 of file SequenceVariant_.hpp.

Tparent [61/71]

typedef CSimpleVariant_Base CSimpleVariant::Tparent

private

Definition at line 67 of file SimpleVariant.hpp.

Tparent [62/71]

typedef CSerialObject CSimpleVariant_Base::Tparent

private

Definition at line 86 of file SimpleVariant_.hpp.

Tparent [63/71]

typedef CSerialObject CSimpleVariant_Base::C_Type::Tparent

private

Definition at line 103 of file SimpleVariant_.hpp.

Tparent [64/71]

typedef CSimpleVariantSeq_Base CSimpleVariantSeq::Tparent

private

Definition at line 67 of file SimpleVariantSeq.hpp.

Tparent [65/71]

typedef CSerialObject CSimpleVariantSeq_Base::Tparent

private

Definition at line 79 of file SimpleVariantSeq_.hpp.

Tparent [66/71]

typedef CSubsequence_Base CSubsequence::Tparent

private

Definition at line 67 of file Subsequence.hpp.

Tparent [67/71]

typedef CSerialObject CSubsequence_Base::Tparent

private

Definition at line 79 of file Subsequence_.hpp.

Tparent [68/71]

typedef CVariant_Base CVariant::Tparent

private

Definition at line 67 of file Variant.hpp.

Tparent [69/71]

typedef CSerialObject CVariant_Base::Tparent

private

Definition at line 78 of file Variant_.hpp.

Tparent [70/71]

typedef CVariantExpression_Base CVariantExpression::Tparent

private

Definition at line 67 of file VariantExpression.hpp.

Tparent [71/71]

typedef CSerialObject CVariantExpression_Base::Tparent

private

Definition at line 79 of file VariantExpression_.hpp.

TProt_ext

typedef CProteinExtension CSimpleVariant_Base::C_Type::TProt_ext

Definition at line 195 of file SimpleVariant_.hpp.

TProt_silent

typedef CAaLocation CSimpleVariant_Base::C_Type::TProt_silent

Definition at line 187 of file SimpleVariant_.hpp.

TProt_sub

typedef CProteinSub CSimpleVariant_Base::C_Type::TProt_sub

Definition at line 186 of file SimpleVariant_.hpp.

TRange [1/4]

typedef CAaSiteRange CAaLocation_Base::TRange

Definition at line 148 of file AaLocation_.hpp.

TRange [2/4]

typedef C_Range CCount_Base::TRange

Definition at line 536 of file Count_.hpp.

TRange [3/4]

typedef CNtSiteRange CNtIntLimit_Base::TRange

Definition at line 146 of file NtIntLimit_.hpp.

TRange [4/4]

typedef CNtSiteRange CNtLocation_Base::TRange

Definition at line 148 of file NtLocation_.hpp.

TRaw_seq [1/6]

typedef string CDeletion_Base::TRaw_seq

Definition at line 90 of file Deletion_.hpp.

TRaw_seq [2/6]

typedef string CDelins_Base::C_Inserted_seq_info::TRaw_seq

Definition at line 170 of file Delins_.hpp.

TRaw_seq [3/6]

typedef string CDuplication_Base::TRaw_seq

Definition at line 90 of file Duplication_.hpp.

TRaw_seq [4/6]

typedef string CInsertion_Base::C_Seqinfo::TRaw_seq

Definition at line 170 of file Insertion_.hpp.

TRaw_seq [5/6]

typedef string CInversion_Base::TRaw_seq

Definition at line 90 of file Inversion_.hpp.

TRaw_seq [6/6]

typedef string CRepeat_Base::TRaw_seq

Definition at line 92 of file Repeat_.hpp.

TReference_id

typedef string CVariantExpression_Base::TReference_id

Definition at line 91 of file VariantExpression_.hpp.

TRefStop

typedef int CCtermExtension_Base::TRefStop

Definition at line 89 of file CtermExtension_.hpp.

TRepeat

typedef CRepeat CSimpleVariant_Base::C_Type::TRepeat

Definition at line 194 of file SimpleVariant_.hpp.

TSeqid

typedef string CNtSite_Base::TSeqid

Definition at line 486 of file NtSite_.hpp.

TSeqinfo

typedef C_Seqinfo CInsertion_Base::TSeqinfo

Definition at line 302 of file Insertion_.hpp.

TSeqtype [1/2]

typedef int CNtSite_Base::TSeqtype

Definition at line 487 of file NtSite_.hpp.

TSeqtype [2/2]

typedef int CSequenceVariant_Base::TSeqtype

Definition at line 98 of file SequenceVariant_.hpp.

TSequence_variant

typedef CSequenceVariant CVariantExpression_Base::TSequence_variant

Definition at line 92 of file VariantExpression_.hpp.

TSimple

typedef CSimpleVariant CVariant_Base::TSimple

Definition at line 148 of file Variant_.hpp.

TSisters

typedef bool CSimpleVariantSeq_Base::TSisters

Definition at line 91 of file SimpleVariantSeq_.hpp.

TSite [1/3]

typedef CAaSite CAaLocation_Base::TSite

Definition at line 147 of file AaLocation_.hpp.

TSite [2/3]

typedef CNtSite CNtIntLimit_Base::TSite

Definition at line 145 of file NtIntLimit_.hpp.

TSite [3/3]

typedef CNtSite CNtLocation_Base::TSite

Definition at line 147 of file NtLocation_.hpp.

TSize

typedef int CInversion_Base::TSize

Definition at line 91 of file Inversion_.hpp.

TSpecial

typedef int CVariant_Base::TSpecial

Definition at line 149 of file Variant_.hpp.

TStart [1/5]

typedef CAaSite CAaInterval_Base::TStart

Definition at line 85 of file AaInterval_.hpp.

TStart [2/5]

typedef CAaSite CAaSiteRange_Base::TStart

Definition at line 85 of file AaSiteRange_.hpp.

TStart [3/5]

typedef C_Start CCount_Base::C_Range::TStart

Definition at line 370 of file Count_.hpp.

TStart [4/5]

typedef CNtIntLimit CNtInterval_Base::TStart

Definition at line 85 of file NtInterval_.hpp.

TStart [5/5]

typedef CNtSite CNtSiteRange_Base::TStart

Definition at line 85 of file NtSiteRange_.hpp.

TStop [1/5]

typedef CAaSite CAaInterval_Base::TStop

Definition at line 86 of file AaInterval_.hpp.

TStop [2/5]

typedef CAaSite CAaSiteRange_Base::TStop

Definition at line 86 of file AaSiteRange_.hpp.

TStop [3/5]

typedef C_Stop CCount_Base::C_Range::TStop

Definition at line 371 of file Count_.hpp.

TStop [4/5]

typedef CNtIntLimit CNtInterval_Base::TStop

Definition at line 86 of file NtInterval_.hpp.

TStop [5/5]

typedef CNtSite CNtSiteRange_Base::TStop

Definition at line 86 of file NtSiteRange_.hpp.

TStrand_minus

typedef bool CNtSite_Base::TStrand_minus

Definition at line 491 of file NtSite_.hpp.

TSubseq [1/2]

typedef CSubsequence CDelins_Base::C_Inserted_seq_info::TSubseq

Definition at line 172 of file Delins_.hpp.

TSubseq [2/2]

typedef CSubsequence CInsertion_Base::C_Seqinfo::TSubseq

Definition at line 172 of file Insertion_.hpp.

TSubvariants

typedef list< CRef< CVariant > > CSequenceVariant_Base::TSubvariants

Definition at line 99 of file SequenceVariant_.hpp.

TType [1/3]

typedef int CProteinSub_Base::TType

Definition at line 98 of file ProteinSub_.hpp.

TType [2/3]

typedef C_Type CSimpleVariant_Base::TType

Definition at line 554 of file SimpleVariant_.hpp.

TType [3/3]

typedef int CSubsequence_Base::TType

Definition at line 91 of file Subsequence_.hpp.

TUtr

typedef C_Utr CNtSite_Base::TUtr

Definition at line 490 of file NtSite_.hpp.

TVal [1/5]

typedef TSeqPos CCount_Base::C_Range::C_Start::TVal

Definition at line 174 of file Count_.hpp.

TVal [2/5]

typedef TSeqPos CCount_Base::C_Range::C_Stop::TVal

Definition at line 310 of file Count_.hpp.

TVal [3/5]

typedef TSeqPos CCount_Base::TVal

Definition at line 534 of file Count_.hpp.

TVal [4/5]

typedef TSeqPos CNtSite_Base::C_Base::TVal

Definition at line 162 of file NtSite_.hpp.

TVal [5/5]

typedef TSignedSeqPos CNtSite_Base::C_Offset::TVal

Definition at line 299 of file NtSite_.hpp.

TVariants

typedef list< CRef< CSimpleVariant > > CSimpleVariantSeq_Base::TVariants

Definition at line 90 of file SimpleVariantSeq_.hpp.

Enumeration Type Documentation

E_Choice [1/17]

enum CAaLocation_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Site
e_Range
e_Int

Definition at line 88 of file AaLocation_.hpp.

E_Choice [2/17]

enum CCount_Base::C_Range::C_Start::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Val
e_Unknown

Definition at line 116 of file Count_.hpp.

E_Choice [3/17]

enum CCount_Base::C_Range::C_Stop::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Val
e_Unknown

Definition at line 252 of file Count_.hpp.

E_Choice [4/17]

enum CCount_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Unknown
e_Val
e_Fuzzy_val
e_Range

Definition at line 474 of file Count_.hpp.

E_Choice [5/17]

enum CDelins_Base::C_Inserted_seq_info::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Identifier	A sequence identifier (e.g. an accession id)
e_Raw_seq	The actual nucleotide / amino-acid sequence.
e_Count	The number of elements inserted.
e_Subseq	A subsequence specified by an id, type descriptor, and a range.

Definition at line 109 of file Delins_.hpp.

E_Choice [6/17]

enum CFrameshift_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Aasite
e_Stopcodon

Definition at line 86 of file Frameshift_.hpp.

E_Choice [7/17]

enum CInsertion_Base::C_Seqinfo::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Identifier	A sequence identifier (e.g. an accession id)
e_Raw_seq	The actual nucleotide / amino-acid sequence.
e_Count	The number of elements inserted.
e_Subseq	A subsequence specified by an id, type descriptor, and a range.

Definition at line 109 of file Insertion_.hpp.

E_Choice [8/17]

enum CNtIntLimit_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Site
e_Range

Definition at line 87 of file NtIntLimit_.hpp.

E_Choice [9/17]

enum CNtLocation_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Site
e_Range
e_Int

Definition at line 88 of file NtLocation_.hpp.

E_Choice [10/17]

enum CNtSite_Base::C_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Val
e_Unknown

Definition at line 104 of file NtSite_.hpp.

E_Choice [11/17]

enum CNtSite_Base::C_Offset::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Val
e_Plus_unknown
e_Minus_unknown

Definition at line 240 of file NtSite_.hpp.

E_Choice [12/17]

enum CNtSite_Base::C_Utr::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Five_prime
e_Three_prime

Definition at line 388 of file NtSite_.hpp.

E_Choice [13/17]

enum CProteinExtension_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Nterm_ext
e_Cterm_ext

Definition at line 87 of file ProteinExtension_.hpp.

E_Choice [14/17]

enum CSeqInterval_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Aaint
e_Ntint

Definition at line 87 of file SeqInterval_.hpp.

E_Choice [15/17]

enum CSeqLocation_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Aaloc
e_Ntloc

Definition at line 87 of file SeqLocation_.hpp.

E_Choice [16/17]

enum CSimpleVariant_Base::C_Type::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Na_identity
e_Na_sub
e_Prot_sub
e_Prot_silent
e_Del
e_Dup
e_Inv
e_Ins
e_Conv
e_Delins
e_Repeat	short-sequence repeat (ssr)
e_Prot_ext
e_Frameshift

Definition at line 115 of file SimpleVariant_.hpp.

E_Choice [17/17]

enum CVariant_Base::E_Choice

Choice variants.

Enumerator
e_not_set	No variant selected.
e_Simple
e_Special

Definition at line 90 of file Variant_.hpp.

E_ChoiceStopper [1/17]

enum CAaLocation_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Int+1

Definition at line 95 of file AaLocation_.hpp.

E_ChoiceStopper [2/17]

enum CCount_Base::C_Range::C_Start::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Unknown+1

Definition at line 122 of file Count_.hpp.

E_ChoiceStopper [3/17]

enum CCount_Base::C_Range::C_Stop::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Unknown+1

Definition at line 258 of file Count_.hpp.

E_ChoiceStopper [4/17]

enum CCount_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Range+1

Definition at line 482 of file Count_.hpp.

E_ChoiceStopper [5/17]

enum CDelins_Base::C_Inserted_seq_info::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Subseq+1

Definition at line 117 of file Delins_.hpp.

E_ChoiceStopper [6/17]

enum CFrameshift_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Stopcodon+1

Definition at line 92 of file Frameshift_.hpp.

E_ChoiceStopper [7/17]

enum CInsertion_Base::C_Seqinfo::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Subseq+1

Definition at line 117 of file Insertion_.hpp.

E_ChoiceStopper [8/17]

enum CNtIntLimit_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Range+1

Definition at line 93 of file NtIntLimit_.hpp.

E_ChoiceStopper [9/17]

enum CNtLocation_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Int+1

Definition at line 95 of file NtLocation_.hpp.

E_ChoiceStopper [10/17]

enum CNtSite_Base::C_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Unknown+1

Definition at line 110 of file NtSite_.hpp.

E_ChoiceStopper [11/17]

enum CNtSite_Base::C_Offset::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Minus_unknown+1

Definition at line 247 of file NtSite_.hpp.

E_ChoiceStopper [12/17]

enum CNtSite_Base::C_Utr::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Three_prime+1

Definition at line 394 of file NtSite_.hpp.

E_ChoiceStopper [13/17]

enum CProteinExtension_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Cterm_ext+1

Definition at line 93 of file ProteinExtension_.hpp.

E_ChoiceStopper [14/17]

enum CSeqInterval_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Ntint+1

Definition at line 93 of file SeqInterval_.hpp.

E_ChoiceStopper [15/17]

enum CSeqLocation_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Ntloc+1

Definition at line 93 of file SeqLocation_.hpp.

E_ChoiceStopper [16/17]

enum CSimpleVariant_Base::C_Type::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Frameshift+1

Definition at line 132 of file SimpleVariant_.hpp.

E_ChoiceStopper [17/17]

enum CVariant_Base::E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

Enumerator
e_MaxChoice	== e_Special+1

Definition at line 96 of file Variant_.hpp.

E_memberIndex [1/24]

enum CAaInterval_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_start
e_stop

Definition at line 89 of file AaInterval_.hpp.

E_memberIndex [2/24]

enum CAaSite_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_index
e_aa

Definition at line 89 of file AaSite_.hpp.

E_memberIndex [3/24]

enum CAaSiteRange_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_start
e_stop

Definition at line 89 of file AaSiteRange_.hpp.

E_memberIndex [4/24]

enum CConversion_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_origin

Definition at line 89 of file Conversion_.hpp.

E_memberIndex [5/24]

enum CCount_Base::C_Range::E_memberIndex

strong

Enumerator
e__allMandatory
e_start
e_stop

Definition at line 374 of file Count_.hpp.

E_memberIndex [6/24]

enum CCtermExtension_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_refStop
e_newAa
e_length

Definition at line 94 of file CtermExtension_.hpp.

E_memberIndex [7/24]

enum CDeletion_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_raw_seq

Definition at line 93 of file Deletion_.hpp.

E_memberIndex [8/24]

enum CDelins_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_deleted_raw_seq
e_inserted_seq_info

Definition at line 306 of file Delins_.hpp.

E_memberIndex [9/24]

enum CDuplication_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_raw_seq

Definition at line 93 of file Duplication_.hpp.

E_memberIndex [10/24]

enum CInsertion_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_int
e_seqinfo

Definition at line 305 of file Insertion_.hpp.

E_memberIndex [11/24]

enum CInversion_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_ntint
e_raw_seq
e_size

Definition at line 94 of file Inversion_.hpp.

E_memberIndex [12/24]

enum CNaIdentity_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_nucleotide

Definition at line 93 of file NaIdentity_.hpp.

E_memberIndex [13/24]

enum CNaSub_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_initial
e_final

Definition at line 94 of file NaSub_.hpp.

E_memberIndex [14/24]

enum CNtermExtension_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_newStart
e_newAa

Definition at line 93 of file NtermExtension_.hpp.

E_memberIndex [15/24]

enum CNtInterval_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_start
e_stop

Definition at line 89 of file NtInterval_.hpp.

E_memberIndex [16/24]

enum CNtSite_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_seqid
e_seqtype
e_base
e_offset
e_utr
e_strand_minus
e_fuzzy
e_fuzzy_offset

Definition at line 496 of file NtSite_.hpp.

E_memberIndex [17/24]

enum CNtSiteRange_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_start
e_stop

Definition at line 89 of file NtSiteRange_.hpp.

E_memberIndex [18/24]

enum CProteinSub_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_type
e_initial
e_final

Definition at line 103 of file ProteinSub_.hpp.

E_memberIndex [19/24]

enum CRepeat_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_loc
e_count
e_raw_seq

Definition at line 95 of file Repeat_.hpp.

E_memberIndex [20/24]

enum CSequenceVariant_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_seqtype
e_subvariants
e_complex

Definition at line 103 of file SequenceVariant_.hpp.

E_memberIndex [21/24]

enum CSimpleVariant_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_type
e_fuzzy

Definition at line 558 of file SimpleVariant_.hpp.

E_memberIndex [22/24]

enum CSimpleVariantSeq_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_variants
e_sisters
e_fuzzy

Definition at line 95 of file SimpleVariantSeq_.hpp.

E_memberIndex [23/24]

enum CSubsequence_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_identifier
e_type
e_int

Definition at line 95 of file Subsequence_.hpp.

E_memberIndex [24/24]

enum CVariantExpression_Base::E_memberIndex

strong

Enumerator
e__allMandatory
e_input_expr
e_reference_id
e_sequence_variant

Definition at line 95 of file VariantExpression_.hpp.

EComplex

enum CSequenceVariant_Base::EComplex

Enumerator
eComplex_mosaic
eComplex_chimera

Definition at line 89 of file SequenceVariant_.hpp.

ESpecialVariant

enum ESpecialVariant

Access to ESpecialVariant's attributes (values, names) as defined in spec.

Enumerator
eSpecialVariant_unknown	?
eSpecialVariant_not_analyzed	(?) Not sure about this
eSpecialVariant_nochange	=
eSpecialVariant_nochange_expected	(=)
eSpecialVariant_noseq	0
eSpecialVariant_noseq_expected	0?
eSpecialVariant_splice_expected	spl?
eSpecialVariant_splice_possible	(spl?)

Definition at line 63 of file SpecialVariant_.hpp.

EType

enum CProteinSub_Base::EType

(

void

)

Enumerator
eType_missense
eType_nonsense
eType_unknown

Definition at line 88 of file ProteinSub_.hpp.

EVariantSeqType

enum EVariantSeqType

Access to EVariantSeqType's attributes (values, names) as defined in spec.

Enumerator
eVariantSeqType_g	genomic
eVariantSeqType_m	mitochondrial
eVariantSeqType_c	coding
eVariantSeqType_r	rna
eVariantSeqType_n	non-coding rna
eVariantSeqType_p	protein
eVariantSeqType_u	unknown

Definition at line 63 of file VariantSeqType_.hpp.

Function Documentation

C_Base() [1/2]

CNtSite_Base::C_Base::C_Base ( const C_Base &  )

private

C_Base() [2/2]

END_CHOICE_INFO CNtSite_Base::C_Base::C_Base

(

void

)

Definition at line 104 of file NtSite_.cpp.

C_Inserted_seq_info() [1/2]

CDelins_Base::C_Inserted_seq_info::C_Inserted_seq_info ( const C_Inserted_seq_info &  )

private

C_Inserted_seq_info() [2/2]

END_CHOICE_INFO CDelins_Base::C_Inserted_seq_info::C_Inserted_seq_info

(

void

)

Definition at line 186 of file Delins_.cpp.

C_Offset() [1/2]

CNtSite_Base::C_Offset::C_Offset ( const C_Offset &  )

private

C_Offset() [2/2]

END_CHOICE_INFO CNtSite_Base::C_Offset::C_Offset

(

void

)

Definition at line 172 of file NtSite_.cpp.

C_Range() [1/2]

CCount_Base::C_Range::C_Range ( const C_Range &  )

private

C_Range() [2/2]

END_CLASS_INFO CCount_Base::C_Range::C_Range

(

void

)

Definition at line 229 of file Count_.cpp.

References CObject::IsAllocatedInPool(), CCount_Base::C_Range::m_set_State, CCount_Base::C_Range::ResetStart(), and CCount_Base::C_Range::ResetStop().

Referenced by BEGIN_NAMED_BASE_CHOICE_INFO(), and CCount_Base::DoSelect().

C_Seqinfo() [1/2]

CInsertion_Base::C_Seqinfo::C_Seqinfo ( const C_Seqinfo &  )

private

C_Seqinfo() [2/2]

END_CHOICE_INFO CInsertion_Base::C_Seqinfo::C_Seqinfo

(

void

)

Definition at line 186 of file Insertion_.cpp.

C_Start() [1/2]

CCount_Base::C_Range::C_Start::C_Start ( const C_Start &  )

private

C_Start() [2/2]

END_CHOICE_INFO CCount_Base::C_Range::C_Start::C_Start

(

void

)

Definition at line 104 of file Count_.cpp.

C_Stop() [1/2]

CCount_Base::C_Range::C_Stop::C_Stop ( const C_Stop &  )

private

C_Stop() [2/2]

END_CHOICE_INFO CCount_Base::C_Range::C_Stop::C_Stop

(

void

)

Definition at line 170 of file Count_.cpp.

C_Type() [1/2]

CSimpleVariant_Base::C_Type::C_Type ( const C_Type &  )

private

C_Type() [2/2]

END_CHOICE_INFO CSimpleVariant_Base::C_Type::C_Type

(

void

)

Definition at line 480 of file SimpleVariant_.cpp.

C_Utr() [1/2]

CNtSite_Base::C_Utr::C_Utr ( const C_Utr &  )

private

C_Utr() [2/2]

END_CHOICE_INFO CNtSite_Base::C_Utr::C_Utr

(

void

)

Definition at line 231 of file NtSite_.cpp.

CAaInterval_Base() [1/2]

CAaInterval_Base::CAaInterval_Base ( const CAaInterval_Base &  )

private

CAaInterval_Base() [2/2]

END_CLASS_INFO CAaInterval_Base::CAaInterval_Base

(

void

)

Definition at line 97 of file AaInterval_.cpp.

References CObject::IsAllocatedInPool(), CAaInterval_Base::m_set_State, CAaInterval_Base::ResetStart(), and CAaInterval_Base::ResetStop().

CAaLocation_Base() [1/2]

CAaLocation_Base::CAaLocation_Base ( const CAaLocation_Base &  )

private

CAaLocation_Base() [2/2]

END_CHOICE_INFO CAaLocation_Base::CAaLocation_Base

(

void

)

Definition at line 189 of file AaLocation_.cpp.

CAaSite() [1/2]

CAaSite::CAaSite ( const CAaSite &  value )

private

CAaSite() [2/2]

CAaSite::CAaSite ( void  )

inline

Definition at line 86 of file AaSite.hpp.

CAaSite_Base() [1/2]

CAaSite_Base::CAaSite_Base ( const CAaSite_Base &  )

private

CAaSite_Base() [2/2]

END_CLASS_INFO CAaSite_Base::CAaSite_Base

(

void

)

Definition at line 74 of file AaSite_.cpp.

References CAaSite_Base::m_set_State.

CAaSiteRange() [1/2]

CAaSiteRange::CAaSiteRange ( const CAaSiteRange &  value )

private

CAaSiteRange() [2/2]

CAaSiteRange::CAaSiteRange ( void  )

inline

Definition at line 86 of file AaSiteRange.hpp.

CAaSiteRange_Base() [1/2]

CAaSiteRange_Base::CAaSiteRange_Base ( const CAaSiteRange_Base &  )

private

CAaSiteRange_Base() [2/2]

END_CLASS_INFO CAaSiteRange_Base::CAaSiteRange_Base

(

void

)

Definition at line 97 of file AaSiteRange_.cpp.

References CObject::IsAllocatedInPool(), CAaSiteRange_Base::m_set_State, CAaSiteRange_Base::ResetStart(), and CAaSiteRange_Base::ResetStop().

CanGetAa()

bool CAaSite_Base::CanGetAa ( void  ) const

inline

Check if it is safe to call GetAa method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 252 of file AaSite_.hpp.

References CAaSite_Base::IsSetAa().

Referenced by CAaSite_Base::GetAa().

CanGetBase()

bool CNtSite_Base::CanGetBase ( void  ) const

inline

Check if it is safe to call GetBase method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1154 of file NtSite_.hpp.

CanGetComplex()

bool CSequenceVariant_Base::CanGetComplex ( void  ) const

inline

Check if it is safe to call GetComplex method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 323 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::IsSetComplex().

Referenced by CSequenceVariant_Base::GetComplex().

CanGetCount()

bool CRepeat_Base::CanGetCount ( void  ) const

inline

Check if it is safe to call GetCount method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 281 of file Repeat_.hpp.

CanGetDeleted_raw_seq()

bool CDelins_Base::CanGetDeleted_raw_seq ( void  ) const

inline

Check if it is safe to call GetDeleted_raw_seq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 573 of file Delins_.hpp.

References CDelins_Base::IsSetDeleted_raw_seq().

Referenced by CDelins_Base::GetDeleted_raw_seq().

CanGetFinal() [1/2]

bool CNaSub_Base::CanGetFinal ( void  ) const

inline

Check if it is safe to call GetFinal method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 327 of file NaSub_.hpp.

References CNaSub_Base::IsSetFinal().

Referenced by CNaSub_Base::GetFinal().

CanGetFinal() [2/2]

bool CProteinSub_Base::CanGetFinal ( void  ) const

inline

Check if it is safe to call GetFinal method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 335 of file ProteinSub_.hpp.

References CProteinSub_Base::IsSetFinal().

Referenced by CProteinSub_Base::GetFinal().

CanGetFuzzy() [1/3]

bool CNtSite_Base::CanGetFuzzy ( void  ) const

inline

Check if it is safe to call GetFuzzy method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1276 of file NtSite_.hpp.

CanGetFuzzy() [2/3]

bool CSimpleVariant_Base::CanGetFuzzy ( void  ) const

inline

Check if it is safe to call GetFuzzy method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 813 of file SimpleVariant_.hpp.

CanGetFuzzy() [3/3]

bool CSimpleVariantSeq_Base::CanGetFuzzy ( void  ) const

inline

Check if it is safe to call GetFuzzy method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 324 of file SimpleVariantSeq_.hpp.

CanGetFuzzy_offset()

bool CNtSite_Base::CanGetFuzzy_offset ( void  ) const

inline

Check if it is safe to call GetFuzzy_offset method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1326 of file NtSite_.hpp.

CanGetIdentifier()

bool CSubsequence_Base::CanGetIdentifier ( void  ) const

inline

Check if it is safe to call GetIdentifier method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 251 of file Subsequence_.hpp.

References CSubsequence_Base::IsSetIdentifier().

Referenced by CSubsequence_Base::GetIdentifier().

CanGetIndex()

bool CAaSite_Base::CanGetIndex ( void  ) const

inline

Check if it is safe to call GetIndex method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 205 of file AaSite_.hpp.

References CAaSite_Base::IsSetIndex().

Referenced by CAaSite_Base::GetIndex().

CanGetInitial() [1/2]

bool CNaSub_Base::CanGetInitial ( void  ) const

inline

Check if it is safe to call GetInitial method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 280 of file NaSub_.hpp.

References CNaSub_Base::IsSetInitial().

Referenced by CNaSub_Base::GetInitial().

CanGetInitial() [2/2]

bool CProteinSub_Base::CanGetInitial ( void  ) const

inline

Check if it is safe to call GetInitial method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 305 of file ProteinSub_.hpp.

CanGetInput_expr()

bool CVariantExpression_Base::CanGetInput_expr ( void  ) const

inline

Check if it is safe to call GetInput_expr method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 253 of file VariantExpression_.hpp.

References CVariantExpression_Base::IsSetInput_expr().

Referenced by CVariantExpression_Base::GetInput_expr().

CanGetInserted_seq_info()

bool CDelins_Base::CanGetInserted_seq_info ( void  ) const

inline

Check if it is safe to call GetInserted_seq_info method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 620 of file Delins_.hpp.

CanGetInt() [1/2]

bool CInsertion_Base::CanGetInt ( void  ) const

inline

Check if it is safe to call GetInt method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 501 of file Insertion_.hpp.

CanGetInt() [2/2]

bool CSubsequence_Base::CanGetInt ( void  ) const

inline

Check if it is safe to call GetInt method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 345 of file Subsequence_.hpp.

CanGetLength()

bool CCtermExtension_Base::CanGetLength ( void  ) const

inline

Check if it is safe to call GetLength method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 343 of file CtermExtension_.hpp.

CanGetLoc() [1/7]

bool CConversion_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 204 of file Conversion_.hpp.

CanGetLoc() [2/7]

bool CDeletion_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 210 of file Deletion_.hpp.

CanGetLoc() [3/7]

bool CDelins_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 543 of file Delins_.hpp.

CanGetLoc() [4/7]

bool CDuplication_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 210 of file Duplication_.hpp.

CanGetLoc() [5/7]

bool CNaIdentity_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 209 of file NaIdentity_.hpp.

CanGetLoc() [6/7]

bool CNaSub_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 250 of file NaSub_.hpp.

CanGetLoc() [7/7]

bool CRepeat_Base::CanGetLoc ( void  ) const

inline

Check if it is safe to call GetLoc method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 251 of file Repeat_.hpp.

CanGetNewAa() [1/2]

bool CCtermExtension_Base::CanGetNewAa ( void  ) const

inline

Check if it is safe to call GetNewAa method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 296 of file CtermExtension_.hpp.

References CCtermExtension_Base::IsSetNewAa().

Referenced by CCtermExtension_Base::GetNewAa().

CanGetNewAa() [2/2]

bool CNtermExtension_Base::CanGetNewAa ( void  ) const

inline

Check if it is safe to call GetNewAa method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 239 of file NtermExtension_.hpp.

References CNtermExtension_Base::IsSetNewAa().

Referenced by CNtermExtension_Base::GetNewAa().

CanGetNewStart()

bool CNtermExtension_Base::CanGetNewStart ( void  ) const

inline

Check if it is safe to call GetNewStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 209 of file NtermExtension_.hpp.

CanGetNtint()

bool CInversion_Base::CanGetNtint ( void  ) const

inline

Check if it is safe to call GetNtint method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 250 of file Inversion_.hpp.

CanGetNucleotide()

bool CNaIdentity_Base::CanGetNucleotide ( void  ) const

inline

Check if it is safe to call GetNucleotide method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 239 of file NaIdentity_.hpp.

References CNaIdentity_Base::IsSetNucleotide().

Referenced by CNaIdentity_Base::GetNucleotide().

CanGetOffset()

bool CNtSite_Base::CanGetOffset ( void  ) const

inline

Check if it is safe to call GetOffset method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1184 of file NtSite_.hpp.

References CNtSite_Base::IsSetOffset().

Referenced by CNtSite_Base::GetOffset().

CanGetOrigin()

bool CConversion_Base::CanGetOrigin ( void  ) const

inline

Check if it is safe to call GetOrigin method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 234 of file Conversion_.hpp.

CanGetRaw_seq() [1/4]

bool CDeletion_Base::CanGetRaw_seq ( void  ) const

inline

Check if it is safe to call GetRaw_seq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 240 of file Deletion_.hpp.

References CDeletion_Base::IsSetRaw_seq().

Referenced by CDeletion_Base::GetRaw_seq().

CanGetRaw_seq() [2/4]

bool CDuplication_Base::CanGetRaw_seq ( void  ) const

inline

Check if it is safe to call GetRaw_seq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 240 of file Duplication_.hpp.

References CDuplication_Base::IsSetRaw_seq().

Referenced by CDuplication_Base::GetRaw_seq().

CanGetRaw_seq() [3/4]

bool CInversion_Base::CanGetRaw_seq ( void  ) const

inline

Check if it is safe to call GetRaw_seq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 280 of file Inversion_.hpp.

References CInversion_Base::IsSetRaw_seq().

Referenced by CInversion_Base::GetRaw_seq().

CanGetRaw_seq() [4/4]

bool CRepeat_Base::CanGetRaw_seq ( void  ) const

inline

Check if it is safe to call GetRaw_seq method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 311 of file Repeat_.hpp.

References CRepeat_Base::IsSetRaw_seq().

Referenced by CRepeat_Base::GetRaw_seq().

CanGetReference_id()

bool CVariantExpression_Base::CanGetReference_id ( void  ) const

inline

Check if it is safe to call GetReference_id method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 300 of file VariantExpression_.hpp.

References CVariantExpression_Base::IsSetReference_id().

Referenced by CVariantExpression_Base::GetReference_id().

CanGetRefStop()

bool CCtermExtension_Base::CanGetRefStop ( void  ) const

inline

Check if it is safe to call GetRefStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 249 of file CtermExtension_.hpp.

References CCtermExtension_Base::IsSetRefStop().

Referenced by CCtermExtension_Base::GetRefStop().

CanGetSeqid()

bool CNtSite_Base::CanGetSeqid ( void  ) const

inline

Check if it is safe to call GetSeqid method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1060 of file NtSite_.hpp.

References CNtSite_Base::IsSetSeqid().

Referenced by CNtSite_Base::GetSeqid().

CanGetSeqinfo()

bool CInsertion_Base::CanGetSeqinfo ( void  ) const

inline

Check if it is safe to call GetSeqinfo method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 531 of file Insertion_.hpp.

CanGetSeqtype() [1/2]

bool CNtSite_Base::CanGetSeqtype ( void  ) const

inline

Check if it is safe to call GetSeqtype method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1107 of file NtSite_.hpp.

References CNtSite_Base::IsSetSeqtype().

Referenced by CNtSite_Base::GetSeqtype().

CanGetSeqtype() [2/2]

bool CSequenceVariant_Base::CanGetSeqtype ( void  ) const

inline

Check if it is safe to call GetSeqtype method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 251 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::IsSetSeqtype().

Referenced by CSequenceVariant_Base::GetSeqtype().

CanGetSequence_variant()

bool CVariantExpression_Base::CanGetSequence_variant ( void  ) const

inline

Check if it is safe to call GetSequence_variant method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 347 of file VariantExpression_.hpp.

CanGetSisters()

bool CSimpleVariantSeq_Base::CanGetSisters ( void  ) const

inline

Check if it is safe to call GetSisters method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 274 of file SimpleVariantSeq_.hpp.

CanGetSize()

bool CInversion_Base::CanGetSize ( void  ) const

inline

Check if it is safe to call GetSize method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 327 of file Inversion_.hpp.

References CInversion_Base::IsSetSize().

Referenced by CInversion_Base::GetSize().

CanGetStart() [1/5]

bool CAaInterval_Base::CanGetStart ( void  ) const

inline

Check if it is safe to call GetStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 204 of file AaInterval_.hpp.

CanGetStart() [2/5]

bool CAaSiteRange_Base::CanGetStart ( void  ) const

inline

Check if it is safe to call GetStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 204 of file AaSiteRange_.hpp.

CanGetStart() [3/5]

bool CCount_Base::C_Range::CanGetStart ( void  ) const

inline

Check if it is safe to call GetStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 803 of file Count_.hpp.

CanGetStart() [4/5]

bool CNtInterval_Base::CanGetStart ( void  ) const

inline

Check if it is safe to call GetStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 204 of file NtInterval_.hpp.

CanGetStart() [5/5]

bool CNtSiteRange_Base::CanGetStart ( void  ) const

inline

Check if it is safe to call GetStart method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 204 of file NtSiteRange_.hpp.

CanGetStop() [1/5]

bool CAaInterval_Base::CanGetStop ( void  ) const

inline

Check if it is safe to call GetStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 234 of file AaInterval_.hpp.

CanGetStop() [2/5]

bool CAaSiteRange_Base::CanGetStop ( void  ) const

inline

Check if it is safe to call GetStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 234 of file AaSiteRange_.hpp.

CanGetStop() [3/5]

bool CCount_Base::C_Range::CanGetStop ( void  ) const

inline

Check if it is safe to call GetStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 833 of file Count_.hpp.

CanGetStop() [4/5]

bool CNtInterval_Base::CanGetStop ( void  ) const

inline

Check if it is safe to call GetStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 234 of file NtInterval_.hpp.

CanGetStop() [5/5]

bool CNtSiteRange_Base::CanGetStop ( void  ) const

inline

Check if it is safe to call GetStop method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 234 of file NtSiteRange_.hpp.

CanGetStrand_minus()

bool CNtSite_Base::CanGetStrand_minus ( void  ) const

inline

Check if it is safe to call GetStrand_minus method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1226 of file NtSite_.hpp.

CanGetSubvariants()

bool CSequenceVariant_Base::CanGetSubvariants ( void  ) const

inline

Check if it is safe to call GetSubvariants method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 298 of file SequenceVariant_.hpp.

CanGetType() [1/3]

bool CProteinSub_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 258 of file ProteinSub_.hpp.

References CProteinSub_Base::IsSetType().

Referenced by CProteinSub_Base::GetType().

CanGetType() [2/3]

bool CSimpleVariant_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 783 of file SimpleVariant_.hpp.

CanGetType() [3/3]

bool CSubsequence_Base::CanGetType ( void  ) const

inline

Check if it is safe to call GetType method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 298 of file Subsequence_.hpp.

References CSubsequence_Base::IsSetType().

Referenced by CSubsequence_Base::GetType().

CanGetUtr()

bool CNtSite_Base::CanGetUtr ( void  ) const

inline

Check if it is safe to call GetUtr method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 1205 of file NtSite_.hpp.

References CNtSite_Base::IsSetUtr().

Referenced by CNtSite_Base::GetUtr().

CanGetVariants()

bool CSimpleVariantSeq_Base::CanGetVariants ( void  ) const

inline

Check if it is safe to call GetVariants method.

Returns

• true, if the data member is getatable.
• false, otherwise.

Definition at line 249 of file SimpleVariantSeq_.hpp.

CConversion() [1/2]

CConversion::CConversion ( const CConversion &  value )

private

CConversion() [2/2]

CConversion::CConversion ( void  )

inline

Definition at line 86 of file Conversion.hpp.

CConversion_Base() [1/2]

CConversion_Base::CConversion_Base ( const CConversion_Base &  )

private

CConversion_Base() [2/2]

END_CLASS_INFO CConversion_Base::CConversion_Base

(

void

)

Definition at line 97 of file Conversion_.cpp.

References CObject::IsAllocatedInPool(), CConversion_Base::m_set_State, CConversion_Base::ResetLoc(), and CConversion_Base::ResetOrigin().

CCount() [1/2]

CCount::CCount ( const CCount &  value )

private

CCount() [2/2]

CCount::CCount ( void  )

inline

Definition at line 86 of file Count.hpp.

CCount_Base() [1/2]

CCount_Base::CCount_Base ( const CCount_Base &  )

private

CCount_Base() [2/2]

END_CHOICE_INFO CCount_Base::CCount_Base

(

void

)

Definition at line 336 of file Count_.cpp.

CCtermExtension() [1/2]

CCtermExtension::CCtermExtension ( const CCtermExtension &  value )

private

CCtermExtension() [2/2]

CCtermExtension::CCtermExtension ( void  )

inline

Definition at line 86 of file CtermExtension.hpp.

CCtermExtension_Base() [1/2]

CCtermExtension_Base::CCtermExtension_Base ( const CCtermExtension_Base &  )

private

CCtermExtension_Base() [2/2]

END_CLASS_INFO CCtermExtension_Base::CCtermExtension_Base

(

void

)

Definition at line 91 of file CtermExtension_.cpp.

References CObject::IsAllocatedInPool(), CCtermExtension_Base::m_set_State, and CCtermExtension_Base::ResetLength().

CDeletion() [1/2]

CDeletion::CDeletion ( const CDeletion &  value )

private

CDeletion() [2/2]

CDeletion::CDeletion ( void  )

inline

Definition at line 86 of file Deletion.hpp.

CDeletion_Base() [1/2]

CDeletion_Base::CDeletion_Base ( const CDeletion_Base &  )

private

CDeletion_Base() [2/2]

END_CLASS_INFO CDeletion_Base::CDeletion_Base

(

void

)

Definition at line 89 of file Deletion_.cpp.

References CObject::IsAllocatedInPool(), CDeletion_Base::m_set_State, and CDeletion_Base::ResetLoc().

CDelins() [1/2]

CDelins::CDelins ( const CDelins &  value )

private

CDelins() [2/2]

CDelins::CDelins ( void  )

inline

Definition at line 86 of file Delins.hpp.

CDelins_Base() [1/2]

CDelins_Base::CDelins_Base ( const CDelins_Base &  )

private

CDelins_Base() [2/2]

END_CLASS_INFO CDelins_Base::CDelins_Base

(

void

)

Definition at line 252 of file Delins_.cpp.

References CObject::IsAllocatedInPool(), CDelins_Base::m_set_State, CDelins_Base::ResetInserted_seq_info(), and CDelins_Base::ResetLoc().

CDuplication() [1/2]

CDuplication::CDuplication ( const CDuplication &  value )

private

CDuplication() [2/2]

CDuplication::CDuplication ( void  )

inline

Definition at line 86 of file Duplication.hpp.

CDuplication_Base() [1/2]

CDuplication_Base::CDuplication_Base ( const CDuplication_Base &  )

private

CDuplication_Base() [2/2]

END_CLASS_INFO CDuplication_Base::CDuplication_Base

(

void

)

Definition at line 89 of file Duplication_.cpp.

References CObject::IsAllocatedInPool(), CDuplication_Base::m_set_State, and CDuplication_Base::ResetLoc().

CFrameshift() [1/2]

CFrameshift::CFrameshift ( const CFrameshift &  value )

private

CFrameshift() [2/2]

CFrameshift::CFrameshift ( void  )

inline

Definition at line 86 of file Frameshift.hpp.

CFrameshift_Base() [1/2]

CFrameshift_Base::CFrameshift_Base ( const CFrameshift_Base &  )

private

CFrameshift_Base() [2/2]

END_CHOICE_INFO CFrameshift_Base::CFrameshift_Base

(

void

)

Definition at line 133 of file Frameshift_.cpp.

CheckSelected() [1/17]

void CAaLocation_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 263 of file AaLocation_.hpp.

References CAaLocation_Base::m_choice, and CAaLocation_Base::ThrowInvalidSelection().

Referenced by CAaLocation_Base::GetInt(), CAaLocation_Base::GetRange(), and CAaLocation_Base::GetSite().

CheckSelected() [2/17]

void CCount_Base::C_Range::C_Start::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 667 of file Count_.hpp.

References CCount_Base::m_choice, and CCount_Base::ThrowInvalidSelection().

CheckSelected() [3/17]

void CCount_Base::C_Range::C_Stop::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 735 of file Count_.hpp.

References CCount_Base::m_choice, and CCount_Base::ThrowInvalidSelection().

CheckSelected() [4/17]

void CCount_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 863 of file Count_.hpp.

References CCount_Base::m_choice, and CCount_Base::ThrowInvalidSelection().

Referenced by CCount_Base::GetFuzzy_val(), CCount_Base::GetRange(), CCount_Base::C_Range::C_Start::GetVal(), CCount_Base::C_Range::C_Stop::GetVal(), and CCount_Base::GetVal().

CheckSelected() [5/17]

void CDelins_Base::C_Inserted_seq_info::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 462 of file Delins_.hpp.

CheckSelected() [6/17]

void CFrameshift_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 219 of file Frameshift_.hpp.

References CFrameshift_Base::m_choice, and CFrameshift_Base::ThrowInvalidSelection().

Referenced by CFrameshift_Base::GetAasite().

CheckSelected() [7/17]

void CInsertion_Base::C_Seqinfo::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 420 of file Insertion_.hpp.

CheckSelected() [8/17]

void CNtIntLimit_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 234 of file NtIntLimit_.hpp.

References CNtIntLimit_Base::m_choice, and CNtIntLimit_Base::ThrowInvalidSelection().

Referenced by CNtIntLimit_Base::GetRange(), and CNtIntLimit_Base::GetSite().

CheckSelected() [9/17]

void CNtLocation_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 263 of file NtLocation_.hpp.

References CNtLocation_Base::m_choice, and CNtLocation_Base::ThrowInvalidSelection().

Referenced by CNtLocation_Base::GetInt(), CNtLocation_Base::GetRange(), and CNtLocation_Base::GetSite().

CheckSelected() [10/17]

void CNtSite_Base::C_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 859 of file NtSite_.hpp.

CheckSelected() [11/17]

void CNtSite_Base::C_Offset::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 927 of file NtSite_.hpp.

CheckSelected() [12/17]

void CNtSite_Base::C_Utr::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 1007 of file NtSite_.hpp.

CheckSelected() [13/17]

void CProteinExtension_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 234 of file ProteinExtension_.hpp.

References CProteinExtension_Base::m_choice, and CProteinExtension_Base::ThrowInvalidSelection().

Referenced by CProteinExtension_Base::GetCterm_ext(), and CProteinExtension_Base::GetNterm_ext().

CheckSelected() [14/17]

void CSeqInterval_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 234 of file SeqInterval_.hpp.

References CSeqInterval_Base::m_choice, and CSeqInterval_Base::ThrowInvalidSelection().

Referenced by CSeqInterval_Base::GetAaint(), and CSeqInterval_Base::GetNtint().

CheckSelected() [15/17]

void CSeqLocation_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 234 of file SeqLocation_.hpp.

References CSeqLocation_Base::m_choice, and CSeqLocation_Base::ThrowInvalidSelection().

Referenced by CSeqLocation_Base::GetAaloc(), and CSeqLocation_Base::GetNtloc().

CheckSelected() [16/17]

void CSimpleVariant_Base::C_Type::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 676 of file SimpleVariant_.hpp.

CheckSelected() [17/17]

void CVariant_Base::CheckSelected ( E_Choice  index ) const

inline

Verify selection, throw exception if it differs from the expected.

Parameters

index

Expected selection.

Definition at line 241 of file Variant_.hpp.

References CVariant_Base::m_choice, and CVariant_Base::ThrowInvalidSelection().

Referenced by CVariant_Base::GetSimple(), and CVariant_Base::GetSpecial().

CInsertion() [1/2]

CInsertion::CInsertion ( const CInsertion &  value )

private

CInsertion() [2/2]

CInsertion::CInsertion ( void  )

inline

Definition at line 86 of file Insertion.hpp.

CInsertion_Base() [1/2]

CInsertion_Base::CInsertion_Base ( const CInsertion_Base &  )

private

CInsertion_Base() [2/2]

END_CLASS_INFO CInsertion_Base::CInsertion_Base

(

void

)

Definition at line 244 of file Insertion_.cpp.

References CObject::IsAllocatedInPool(), CInsertion_Base::m_set_State, CInsertion_Base::ResetInt(), and CInsertion_Base::ResetSeqinfo().

CInversion() [1/2]

CInversion::CInversion ( const CInversion &  value )

private

CInversion() [2/2]

CInversion::CInversion ( void  )

inline

Definition at line 86 of file Inversion.hpp.

CInversion_Base() [1/2]

CInversion_Base::CInversion_Base ( const CInversion_Base &  )

private

CInversion_Base() [2/2]

END_CLASS_INFO CInversion_Base::CInversion_Base

(

void

)

Definition at line 91 of file Inversion_.cpp.

References CObject::IsAllocatedInPool(), CInversion_Base::m_set_State, and CInversion_Base::ResetNtint().

CNaIdentity() [1/2]

CNaIdentity::CNaIdentity ( const CNaIdentity &  value )

private

CNaIdentity() [2/2]

CNaIdentity::CNaIdentity ( void  )

inline

Definition at line 86 of file NaIdentity.hpp.

CNaIdentity_Base() [1/2]

CNaIdentity_Base::CNaIdentity_Base ( const CNaIdentity_Base &  )

private

CNaIdentity_Base() [2/2]

END_CLASS_INFO CNaIdentity_Base::CNaIdentity_Base

(

void

)

Definition at line 89 of file NaIdentity_.cpp.

References CObject::IsAllocatedInPool(), CNaIdentity_Base::m_set_State, and CNaIdentity_Base::ResetLoc().

CNaSub() [1/2]

CNaSub::CNaSub ( const CNaSub &  value )

private

CNaSub() [2/2]

CNaSub::CNaSub ( void  )

inline

Definition at line 86 of file NaSub.hpp.

CNaSub_Base() [1/2]

CNaSub_Base::CNaSub_Base ( const CNaSub_Base &  )

private

CNaSub_Base() [2/2]

END_CLASS_INFO CNaSub_Base::CNaSub_Base

(

void

)

Definition at line 97 of file NaSub_.cpp.

References CObject::IsAllocatedInPool(), CNaSub_Base::m_set_State, and CNaSub_Base::ResetLoc().

CNtermExtension() [1/2]

CNtermExtension::CNtermExtension ( const CNtermExtension &  value )

private

CNtermExtension() [2/2]

CNtermExtension::CNtermExtension ( void  )

inline

Definition at line 86 of file NtermExtension.hpp.

CNtermExtension_Base() [1/2]

CNtermExtension_Base::CNtermExtension_Base ( const CNtermExtension_Base &  )

private

CNtermExtension_Base() [2/2]

END_CLASS_INFO CNtermExtension_Base::CNtermExtension_Base

(

void

)

Definition at line 89 of file NtermExtension_.cpp.

References CObject::IsAllocatedInPool(), CNtermExtension_Base::m_set_State, and CNtermExtension_Base::ResetNewStart().

CNtInterval() [1/2]

CNtInterval::CNtInterval ( const CNtInterval &  value )

private

CNtInterval() [2/2]

CNtInterval::CNtInterval ( void  )

inline

Definition at line 86 of file NtInterval.hpp.

CNtInterval_Base() [1/2]

CNtInterval_Base::CNtInterval_Base ( const CNtInterval_Base &  )

private

CNtInterval_Base() [2/2]

END_CLASS_INFO CNtInterval_Base::CNtInterval_Base

(

void

)

Definition at line 97 of file NtInterval_.cpp.

References CObject::IsAllocatedInPool(), CNtInterval_Base::m_set_State, CNtInterval_Base::ResetStart(), and CNtInterval_Base::ResetStop().

CNtIntLimit() [1/2]

CNtIntLimit::CNtIntLimit ( const CNtIntLimit &  value )

private

CNtIntLimit() [2/2]

CNtIntLimit::CNtIntLimit ( void  )

inline

Definition at line 86 of file NtIntLimit.hpp.

CNtIntLimit_Base() [1/2]

CNtIntLimit_Base::CNtIntLimit_Base ( const CNtIntLimit_Base &  )

private

CNtIntLimit_Base() [2/2]

END_CHOICE_INFO CNtIntLimit_Base::CNtIntLimit_Base

(

void

)

Definition at line 160 of file NtIntLimit_.cpp.

CNtLocation() [1/2]

CNtLocation::CNtLocation ( const CNtLocation &  value )

private

CNtLocation() [2/2]

CNtLocation::CNtLocation ( void  )

inline

Definition at line 86 of file NtLocation.hpp.

CNtLocation_Base() [1/2]

CNtLocation_Base::CNtLocation_Base ( const CNtLocation_Base &  )

private

CNtLocation_Base() [2/2]

END_CHOICE_INFO CNtLocation_Base::CNtLocation_Base

(

void

)

Definition at line 189 of file NtLocation_.cpp.

CNtSite() [1/2]

CNtSite::CNtSite ( const CNtSite &  value )

private

CNtSite() [2/2]

CNtSite::CNtSite ( void  )

inline

Definition at line 86 of file NtSite.hpp.

CNtSite_Base() [1/2]

CNtSite_Base::CNtSite_Base ( const CNtSite_Base &  )

private

CNtSite_Base() [2/2]

END_CLASS_INFO CNtSite_Base::CNtSite_Base

(

void

)

Definition at line 327 of file NtSite_.cpp.

References CObject::IsAllocatedInPool(), CNtSite_Base::m_set_State, and CNtSite_Base::ResetBase().

CNtSiteRange() [1/2]

CNtSiteRange::CNtSiteRange ( const CNtSiteRange &  value )

private

CNtSiteRange() [2/2]

CNtSiteRange::CNtSiteRange ( void  )

inline

Definition at line 86 of file NtSiteRange.hpp.

CNtSiteRange_Base() [1/2]

CNtSiteRange_Base::CNtSiteRange_Base ( const CNtSiteRange_Base &  )

private

CNtSiteRange_Base() [2/2]

END_CLASS_INFO CNtSiteRange_Base::CNtSiteRange_Base

(

void

)

Definition at line 97 of file NtSiteRange_.cpp.

References CObject::IsAllocatedInPool(), CNtSiteRange_Base::m_set_State, CNtSiteRange_Base::ResetStart(), and CNtSiteRange_Base::ResetStop().

CProteinExtension() [1/2]

CProteinExtension::CProteinExtension ( const CProteinExtension &  value )

private

CProteinExtension() [2/2]

CProteinExtension::CProteinExtension ( void  )

inline

Definition at line 86 of file ProteinExtension.hpp.

CProteinExtension_Base() [1/2]

CProteinExtension_Base::CProteinExtension_Base ( const CProteinExtension_Base &  )

private

CProteinExtension_Base() [2/2]

END_CHOICE_INFO CProteinExtension_Base::CProteinExtension_Base

(

void

)

Definition at line 160 of file ProteinExtension_.cpp.

CProteinSub() [1/2]

CProteinSub::CProteinSub ( const CProteinSub &  value )

private

CProteinSub() [2/2]

CProteinSub::CProteinSub ( void  )

inline

Definition at line 86 of file ProteinSub.hpp.

CProteinSub_Base() [1/2]

CProteinSub_Base::CProteinSub_Base ( const CProteinSub_Base &  )

private

CProteinSub_Base() [2/2]

END_CLASS_INFO CProteinSub_Base::CProteinSub_Base

(

void

)

Definition at line 101 of file ProteinSub_.cpp.

References CObject::IsAllocatedInPool(), CProteinSub_Base::m_set_State, and CProteinSub_Base::ResetInitial().

CRepeat() [1/2]

CRepeat::CRepeat ( const CRepeat &  value )

private

CRepeat() [2/2]

CRepeat::CRepeat ( void  )

inline

Definition at line 86 of file Repeat.hpp.

CRepeat_Base() [1/2]

CRepeat_Base::CRepeat_Base ( const CRepeat_Base &  )

private

CRepeat_Base() [2/2]

END_CLASS_INFO CRepeat_Base::CRepeat_Base

(

void

)

Definition at line 106 of file Repeat_.cpp.

References CObject::IsAllocatedInPool(), CRepeat_Base::m_set_State, CRepeat_Base::ResetCount(), and CRepeat_Base::ResetLoc().

CSeqInterval() [1/2]

CSeqInterval::CSeqInterval ( const CSeqInterval &  value )

private

CSeqInterval() [2/2]

CSeqInterval::CSeqInterval ( void  )

inline

Definition at line 86 of file SeqInterval.hpp.

CSeqInterval_Base() [1/2]

CSeqInterval_Base::CSeqInterval_Base ( const CSeqInterval_Base &  )

private

CSeqInterval_Base() [2/2]

END_CHOICE_INFO CSeqInterval_Base::CSeqInterval_Base

(

void

)

Definition at line 160 of file SeqInterval_.cpp.

CSeqLocation() [1/2]

CSeqLocation::CSeqLocation ( const CSeqLocation &  value )

private

CSeqLocation() [2/2]

CSeqLocation::CSeqLocation ( void  )

inline

Definition at line 86 of file SeqLocation.hpp.

CSeqLocation_Base() [1/2]

CSeqLocation_Base::CSeqLocation_Base ( const CSeqLocation_Base &  )

private

CSeqLocation_Base() [2/2]

END_CHOICE_INFO CSeqLocation_Base::CSeqLocation_Base

(

void

)

Definition at line 160 of file SeqLocation_.cpp.

CSequenceVariant() [1/2]

CSequenceVariant::CSequenceVariant ( const CSequenceVariant &  value )

private

CSequenceVariant() [2/2]

CSequenceVariant::CSequenceVariant ( void  )

inline

Definition at line 86 of file SequenceVariant.hpp.

CSequenceVariant_Base() [1/2]

CSequenceVariant_Base::CSequenceVariant_Base ( const CSequenceVariant_Base &  )

private

CSequenceVariant_Base() [2/2]

END_CLASS_INFO CSequenceVariant_Base::CSequenceVariant_Base

(

void

)

Definition at line 86 of file SequenceVariant_.cpp.

References CSequenceVariant_Base::m_set_State.

CSimpleVariant() [1/2]

CSimpleVariant::CSimpleVariant ( const CSimpleVariant &  value )

private

CSimpleVariant() [2/2]

CSimpleVariant::CSimpleVariant ( void  )

inline

Definition at line 86 of file SimpleVariant.hpp.

CSimpleVariant_Base() [1/2]

CSimpleVariant_Base::CSimpleVariant_Base ( const CSimpleVariant_Base &  )

private

CSimpleVariant_Base() [2/2]

END_CLASS_INFO CSimpleVariant_Base::CSimpleVariant_Base

(

void

)

Definition at line 524 of file SimpleVariant_.cpp.

References CObject::IsAllocatedInPool(), CSimpleVariant_Base::m_set_State, and CSimpleVariant_Base::ResetType().

CSimpleVariantSeq() [1/2]

CSimpleVariantSeq::CSimpleVariantSeq ( const CSimpleVariantSeq &  value )

private

CSimpleVariantSeq() [2/2]

CSimpleVariantSeq::CSimpleVariantSeq ( void  )

inline

Definition at line 86 of file SimpleVariantSeq.hpp.

CSimpleVariantSeq_Base() [1/2]

CSimpleVariantSeq_Base::CSimpleVariantSeq_Base ( const CSimpleVariantSeq_Base &  )

private

CSimpleVariantSeq_Base() [2/2]

END_CLASS_INFO CSimpleVariantSeq_Base::CSimpleVariantSeq_Base

(

void

)

Definition at line 77 of file SimpleVariantSeq_.cpp.

References CSimpleVariantSeq_Base::m_set_State.

CSubsequence() [1/2]

CSubsequence::CSubsequence ( const CSubsequence &  value )

private

CSubsequence() [2/2]

CSubsequence::CSubsequence ( void  )

inline

Definition at line 86 of file Subsequence.hpp.

CSubsequence_Base() [1/2]

CSubsequence_Base::CSubsequence_Base ( const CSubsequence_Base &  )

private

CSubsequence_Base() [2/2]

END_CLASS_INFO CSubsequence_Base::CSubsequence_Base

(

void

)

Definition at line 91 of file Subsequence_.cpp.

References CObject::IsAllocatedInPool(), CSubsequence_Base::m_set_State, and CSubsequence_Base::ResetInt().

CVariant() [1/2]

CVariant::CVariant ( const CVariant &  value )

private

CVariant() [2/2]

CVariant::CVariant ( void  )

inline

Definition at line 86 of file Variant.hpp.

Referenced by CVariant::BigDateTime(), CVariant::BigInt(), CVariant::Binary(), CVariant::Bit(), CVariant::Char(), CVariant::DateTime(), CVariant::Double(), CVariant::Float(), CVariant::Int(), CVariant::LongBinary(), CVariant::LongChar(), CVariant::Numeric(), CVariant::SmallDateTime(), CVariant::SmallInt(), CVariant::TinyInt(), CVariant::VarBinary(), CVariant::VarBinaryMax(), CVariant::VarChar(), and CVariant::VarCharMax().

CVariant_Base() [1/2]

CVariant_Base::CVariant_Base ( const CVariant_Base &  )

private

CVariant_Base() [2/2]

END_CHOICE_INFO CVariant_Base::CVariant_Base

(

void

)

Definition at line 136 of file Variant_.cpp.

CVariantExpression() [1/2]

CVariantExpression::CVariantExpression ( const CVariantExpression &  value )

private

CVariantExpression() [2/2]

CVariantExpression::CVariantExpression ( void  )

inline

Definition at line 86 of file VariantExpression.hpp.

CVariantExpression_Base() [1/2]

CVariantExpression_Base::CVariantExpression_Base ( const CVariantExpression_Base &  )

private

CVariantExpression_Base() [2/2]

END_CLASS_INFO CVariantExpression_Base::CVariantExpression_Base

(

void

)

Definition at line 97 of file VariantExpression_.cpp.

References CObject::IsAllocatedInPool(), CVariantExpression_Base::m_set_State, and CVariantExpression_Base::ResetSequence_variant().

DECLARE_INTERNAL_TYPE_INFO() [1/41]

CAaInterval_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [2/41]

CAaLocation_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [3/41]

CAaSite_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [4/41]

CAaSiteRange_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [5/41]

CConversion_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [6/41]

CCount_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [7/41]

CCount_Base::C_Range::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [8/41]

CCount_Base::C_Range::C_Start::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [9/41]

CCount_Base::C_Range::C_Stop::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [10/41]

CCtermExtension_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [11/41]

CDeletion_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [12/41]

CDelins_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [13/41]

CDelins_Base::C_Inserted_seq_info::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [14/41]

CDuplication_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [15/41]

CFrameshift_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [16/41]

CInsertion_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [17/41]

CInsertion_Base::C_Seqinfo::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [18/41]

CInversion_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [19/41]

CNaIdentity_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [20/41]

CNaSub_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [21/41]

CNtermExtension_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [22/41]

CNtInterval_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [23/41]

CNtIntLimit_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [24/41]

CNtLocation_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [25/41]

CNtSite_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [26/41]

CNtSite_Base::C_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [27/41]

CNtSite_Base::C_Offset::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [28/41]

CNtSite_Base::C_Utr::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [29/41]

CNtSiteRange_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [30/41]

CProteinExtension_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [31/41]

CProteinSub_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [32/41]

CRepeat_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [33/41]

CSeqInterval_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [34/41]

CSeqLocation_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [35/41]

CSequenceVariant_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [36/41]

CSimpleVariant_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [37/41]

CSimpleVariant_Base::C_Type::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [38/41]

CSimpleVariantSeq_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [39/41]

CSubsequence_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [40/41]

CVariant_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DECLARE_INTERNAL_TYPE_INFO() [41/41]

CVariantExpression_Base::DECLARE_INTERNAL_TYPE_INFO

(

)

DoSelect() [1/17]

void CAaLocation_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 73 of file AaLocation_.cpp.

References CObject::AddReference(), CAaLocation_Base::e_Int, CAaLocation_Base::e_Range, CAaLocation_Base::e_Site, CAaLocation_Base::m_choice, and CAaLocation_Base::m_object.

DoSelect() [2/17]

void CCount_Base::C_Range::C_Start::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 61 of file Count_.cpp.

References CCount_Base::e_Val, CCount_Base::m_choice, and CCount_Base::m_Val.

DoSelect() [3/17]

void CCount_Base::C_Range::C_Stop::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 127 of file Count_.cpp.

References CCount_Base::e_Val, CCount_Base::m_choice, and CCount_Base::m_Val.

DoSelect() [4/17]

void CCount_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 262 of file Count_.cpp.

References CObject::AddReference(), CCount_Base::C_Range::C_Range(), CCount_Base::e_Fuzzy_val, CCount_Base::e_Range, CCount_Base::e_Val, CCount_Base::m_choice, CCount_Base::m_Fuzzy_val, CCount_Base::m_object, and CCount_Base::m_Val.

DoSelect() [5/17]

void CDelins_Base::C_Inserted_seq_info::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 76 of file Delins_.cpp.

References CObject::AddReference().

DoSelect() [6/17]

void CFrameshift_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 69 of file Frameshift_.cpp.

References CObject::AddReference(), CFrameshift_Base::e_Aasite, CFrameshift_Base::m_choice, and CFrameshift_Base::m_object.

DoSelect() [7/17]

void CInsertion_Base::C_Seqinfo::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 76 of file Insertion_.cpp.

References CObject::AddReference().

DoSelect() [8/17]

void CNtIntLimit_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 71 of file NtIntLimit_.cpp.

References CObject::AddReference(), CNtIntLimit_Base::e_Range, CNtIntLimit_Base::e_Site, CNtIntLimit_Base::m_choice, and CNtIntLimit_Base::m_object.

DoSelect() [9/17]

void CNtLocation_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 73 of file NtLocation_.cpp.

References CObject::AddReference(), CNtLocation_Base::e_Int, CNtLocation_Base::e_Range, CNtLocation_Base::e_Site, CNtLocation_Base::m_choice, and CNtLocation_Base::m_object.

DoSelect() [10/17]

void CNtSite_Base::C_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 61 of file NtSite_.cpp.

DoSelect() [11/17]

void CNtSite_Base::C_Offset::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 127 of file NtSite_.cpp.

DoSelect() [12/17]

void CNtSite_Base::C_Utr::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 195 of file NtSite_.cpp.

DoSelect() [13/17]

void CProteinExtension_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 71 of file ProteinExtension_.cpp.

References CObject::AddReference(), CProteinExtension_Base::e_Cterm_ext, CProteinExtension_Base::e_Nterm_ext, CProteinExtension_Base::m_choice, and CProteinExtension_Base::m_object.

DoSelect() [14/17]

void CSeqInterval_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 71 of file SeqInterval_.cpp.

References CObject::AddReference(), CSeqInterval_Base::e_Aaint, CSeqInterval_Base::e_Ntint, CSeqInterval_Base::m_choice, and CSeqInterval_Base::m_object.

DoSelect() [15/17]

void CSeqLocation_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 71 of file SeqLocation_.cpp.

References CObject::AddReference(), CSeqLocation_Base::e_Aaloc, CSeqLocation_Base::e_Ntloc, CSeqLocation_Base::m_choice, and CSeqLocation_Base::m_object.

DoSelect() [16/17]

void CSimpleVariant_Base::C_Type::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 93 of file SimpleVariant_.cpp.

References CObject::AddReference().

DoSelect() [17/17]

void CVariant_Base::DoSelect ( E_Choice  index, CObjectMemoryPool *  pool = 0  )

private

Definition at line 69 of file Variant_.cpp.

References CObject::AddReference(), CVariant_Base::e_Simple, CVariant_Base::e_Special, int, CVariant_Base::m_choice, CVariant_Base::m_object, and CVariant_Base::m_Special.

EComplex()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CSequenceVariant_Base::EComplex ( void  )

static

Access to EComplex's attributes (values, names) as defined in spec.

EType()

static const NCBI_NS_NCBI::CEnumeratedTypeValues* ENUM_METHOD_NAME() CProteinSub_Base::EType ( void  )

static

Access to EType's attributes (values, names) as defined in spec.

GetAa()

const CAaSite_Base::TAa & CAaSite_Base::GetAa ( void  ) const

inline

Get the Aa member data.

Returns

Reference to the member data.

Definition at line 258 of file AaSite_.hpp.

References CAaSite_Base::CanGetAa(), CAaSite_Base::m_Aa, and CSerialObject::ThrowUnassigned().

Referenced by CAaInterval::GetString(), CAaLocation::GetString(), IsMet1(), CHgvsProtIrepReader::x_CreateFrameshiftVarref(), and CHgvsProtIrepReader::x_CreateProteinSubstVarref().

GetAaint()

const CSeqInterval_Base::TAaint & CSeqInterval_Base::GetAaint

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 102 of file SeqInterval_.cpp.

References CSeqInterval_Base::CheckSelected(), CSeqInterval_Base::e_Aaint, and CSeqInterval_Base::m_object.

Referenced by CHgvsProtIrepReader::x_CreateInsertionVarref().

GetAaloc()

const CSeqLocation_Base::TAaloc & CSeqLocation_Base::GetAaloc

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 102 of file SeqLocation_.cpp.

References CSeqLocation_Base::CheckSelected(), CSeqLocation_Base::e_Aaloc, and CSeqLocation_Base::m_object.

Referenced by CHgvsProtIrepReader::x_CreateDelinsVarref(), CHgvsProtIrepReader::x_CreateProteinDelVarref(), CHgvsProtIrepReader::x_CreateProteinDupVarref(), and CHgvsProtIrepReader::x_CreateSSRVarref().

GetAasite()

const CFrameshift_Base::TAasite & CFrameshift_Base::GetAasite

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 97 of file Frameshift_.cpp.

References CFrameshift_Base::CheckSelected(), CFrameshift_Base::e_Aasite, and CFrameshift_Base::m_object.

Referenced by CHgvsProtIrepReader::x_CreateFrameshiftVarref().

GetBase()

const CNtSite_Base::TBase & CNtSite_Base::GetBase ( void  ) const

inline

Get the Base member data.

Returns

Reference to the member data.

Definition at line 1160 of file NtSite_.hpp.

References CNtSite_Base::m_Base, and CNtSite_Base::ResetBase().

Referenced by CIntronOffsetHelper::GetIntronOffset(), CNaSeqlocHelper::x_ComputeSiteIndex(), and CNaSeqlocHelper::x_CreateSeqloc().

GetComplex()

CSequenceVariant_Base::TComplex CSequenceVariant_Base::GetComplex ( void  ) const

inline

Get the Complex member data.

Returns

Copy of the member data.

Definition at line 336 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::CanGetComplex(), CSequenceVariant_Base::m_Complex, and CSerialObject::ThrowUnassigned().

GetConv()

const CSimpleVariant_Base::C_Type::TConv & CSimpleVariant_Base::C_Type::GetConv

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 344 of file SimpleVariant_.cpp.

GetCount() [1/3]

const CDelins_Base::C_Inserted_seq_info::TCount & CDelins_Base::C_Inserted_seq_info::GetCount

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 125 of file Delins_.cpp.

Referenced by CHgvsProtIrepReader::x_CreateDelinsSubvarref().

GetCount() [2/3]

const CInsertion_Base::C_Seqinfo::TCount & CInsertion_Base::C_Seqinfo::GetCount

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 125 of file Insertion_.cpp.

Referenced by CHgvsProtIrepReader::x_CreateInsertionSubvarref().

GetCount() [3/3]

const CRepeat_Base::TCount & CRepeat_Base::GetCount ( void  ) const

inline

Get the Count member data.

Returns

Reference to the member data.

Definition at line 287 of file Repeat_.hpp.

References CRepeat_Base::m_Count, and CRepeat_Base::ResetCount().

Referenced by CHgvsNaIrepReader::x_CreateSSRVarref(), and CHgvsProtIrepReader::x_CreateSSRVarref().

GetCterm_ext()

const CProteinExtension_Base::TCterm_ext & CProteinExtension_Base::GetCterm_ext

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 124 of file ProteinExtension_.cpp.

References CProteinExtension_Base::CheckSelected(), CProteinExtension_Base::e_Cterm_ext, and CProteinExtension_Base::m_object.

GetDel()

const CSimpleVariant_Base::C_Type::TDel & CSimpleVariant_Base::C_Type::GetDel

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 256 of file SimpleVariant_.cpp.

GetDeleted_raw_seq()

const CDelins_Base::TDeleted_raw_seq & CDelins_Base::GetDeleted_raw_seq ( void  ) const

inline

Get the Deleted_raw_seq member data.

Returns

Reference to the member data.

Definition at line 579 of file Delins_.hpp.

References CDelins_Base::CanGetDeleted_raw_seq(), CDelins_Base::m_Deleted_raw_seq, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateDelinsVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

GetDelins()

const CSimpleVariant_Base::C_Type::TDelins & CSimpleVariant_Base::C_Type::GetDelins

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 366 of file SimpleVariant_.cpp.

GetDup()

const CSimpleVariant_Base::C_Type::TDup & CSimpleVariant_Base::C_Type::GetDup

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 278 of file SimpleVariant_.cpp.

GetFinal() [1/2]

const CNaSub_Base::TFinal & CNaSub_Base::GetFinal ( void  ) const

inline

Get the Final member data.

Returns

Reference to the member data.

Definition at line 333 of file NaSub_.hpp.

References CNaSub_Base::CanGetFinal(), CNaSub_Base::m_Final, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateSubstVarref().

GetFinal() [2/2]

const CProteinSub_Base::TFinal & CProteinSub_Base::GetFinal ( void  ) const

inline

Get the Final member data.

Returns

Reference to the member data.

Definition at line 341 of file ProteinSub_.hpp.

References CProteinSub_Base::CanGetFinal(), CProteinSub_Base::m_Final, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsProtIrepReader::x_CreateProteinSubstVarref().

GetFrameshift()

const CSimpleVariant_Base::C_Type::TFrameshift & CSimpleVariant_Base::C_Type::GetFrameshift

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 432 of file SimpleVariant_.cpp.

GetFuzzy() [1/3]

CNtSite_Base::TFuzzy CNtSite_Base::GetFuzzy ( void  ) const

inline

Get the Fuzzy member data.

Returns

Copy of the member data.

Definition at line 1295 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy.

Referenced by CNaSeqlocHelper::x_CreateSeqloc().

GetFuzzy() [2/3]

CSimpleVariant_Base::TFuzzy CSimpleVariant_Base::GetFuzzy ( void  ) const

inline

Get the Fuzzy member data.

Returns

Copy of the member data.

Definition at line 832 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Fuzzy.

Referenced by CHgvsNaIrepReader::x_CreateVarref(), and CHgvsProtIrepReader::x_CreateVarref().

GetFuzzy() [3/3]

CSimpleVariantSeq_Base::TFuzzy CSimpleVariantSeq_Base::GetFuzzy ( void  ) const

inline

Get the Fuzzy member data.

Returns

Copy of the member data.

Definition at line 343 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_Fuzzy.

GetFuzzy_offset()

CNtSite_Base::TFuzzy_offset CNtSite_Base::GetFuzzy_offset ( void  ) const

inline

Get the Fuzzy_offset member data.

Returns

Copy of the member data.

Definition at line 1345 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy_offset.

Referenced by CIntronOffsetHelper::GetIntronOffset().

GetFuzzy_val()

CCount_Base::TFuzzy_val CCount_Base::GetFuzzy_val ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 931 of file Count_.hpp.

References CCount_Base::CheckSelected(), CCount_Base::e_Fuzzy_val, and CCount_Base::m_Fuzzy_val.

GetIdentifier() [1/3]

const CDelins_Base::C_Inserted_seq_info::TIdentifier & CDelins_Base::C_Inserted_seq_info::GetIdentifier ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 491 of file Delins_.hpp.

GetIdentifier() [2/3]

const CInsertion_Base::C_Seqinfo::TIdentifier & CInsertion_Base::C_Seqinfo::GetIdentifier ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 449 of file Insertion_.hpp.

GetIdentifier() [3/3]

const CSubsequence_Base::TIdentifier & CSubsequence_Base::GetIdentifier ( void  ) const

inline

Get the Identifier member data.

Returns

Reference to the member data.

Definition at line 257 of file Subsequence_.hpp.

References CSubsequence_Base::CanGetIdentifier(), CSubsequence_Base::m_Identifier, and CSerialObject::ThrowUnassigned().

GetIndex()

CAaSite_Base::TIndex CAaSite_Base::GetIndex ( void  ) const

inline

Get the Index member data.

Returns

Copy of the member data.

Definition at line 218 of file AaSite_.hpp.

References CAaSite_Base::CanGetIndex(), CAaSite_Base::m_Index, and CSerialObject::ThrowUnassigned().

Referenced by CProtSeqlocHelper::CreateSeqloc(), IsMet1(), s_IntervalLimitsReversed(), and CAaInterval::size().

GetInitial() [1/2]

const CNaSub_Base::TInitial & CNaSub_Base::GetInitial ( void  ) const

inline

Get the Initial member data.

Returns

Reference to the member data.

Definition at line 286 of file NaSub_.hpp.

References CNaSub_Base::CanGetInitial(), CNaSub_Base::m_Initial, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateSubstVarref().

GetInitial() [2/2]

const CProteinSub_Base::TInitial & CProteinSub_Base::GetInitial ( void  ) const

inline

Get the Initial member data.

Returns

Reference to the member data.

Definition at line 311 of file ProteinSub_.hpp.

References CProteinSub_Base::m_Initial, and CProteinSub_Base::ResetInitial().

Referenced by CHgvsProtIrepReader::x_CreateProteinSubstVarref().

GetInput_expr()

const CVariantExpression_Base::TInput_expr & CVariantExpression_Base::GetInput_expr ( void  ) const

inline

Get the Input_expr member data.

Returns

Reference to the member data.

Definition at line 259 of file VariantExpression_.hpp.

References CVariantExpression_Base::CanGetInput_expr(), CVariantExpression_Base::m_Input_expr, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::CreateSeqfeat(), and CHgvsProtIrepReader::CreateSeqfeat().

GetIns()

const CSimpleVariant_Base::C_Type::TIns & CSimpleVariant_Base::C_Type::GetIns

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 322 of file SimpleVariant_.cpp.

GetInserted_seq_info()

const CDelins_Base::TInserted_seq_info & CDelins_Base::GetInserted_seq_info ( void  ) const

inline

Get the Inserted_seq_info member data.

Returns

Reference to the member data.

Definition at line 626 of file Delins_.hpp.

References CDelins_Base::m_Inserted_seq_info, and CDelins_Base::ResetInserted_seq_info().

Referenced by CHgvsNaIrepReader::x_CreateDelinsVarref(), CHgvsProtIrepReader::x_CreateDelinsVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

GetInt() [1/4]

const CAaLocation_Base::TInt & CAaLocation_Base::GetInt

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 152 of file AaLocation_.cpp.

References CAaLocation_Base::CheckSelected(), CAaLocation_Base::e_Int, and CAaLocation_Base::m_object.

Referenced by CProtSeqlocHelper::CreateSeqloc(), CAaLocation::GetString(), CAaLocation::size(), CHgvsProtIrepReader::x_CreateIdentitySubvarref(), and CHgvsProtIrepReader::x_CreateVarrefFromLoc().

GetInt() [2/4]

const CInsertion_Base::TInt & CInsertion_Base::GetInt ( void  ) const

inline

Get the Int member data.

Returns

Reference to the member data.

Definition at line 507 of file Insertion_.hpp.

References CInsertion_Base::m_Int, and CInsertion_Base::ResetInt().

Referenced by CHgvsNaIrepReader::x_CreateInsertionVarref(), and CHgvsProtIrepReader::x_CreateInsertionVarref().

GetInt() [3/4]

const CNtLocation_Base::TInt & CNtLocation_Base::GetInt

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 152 of file NtLocation_.cpp.

References CNtLocation_Base::CheckSelected(), CNtLocation_Base::e_Int, and CNtLocation_Base::m_object.

Referenced by CNaSeqlocHelper::CreateSeqloc(), CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), and s_SetSequenceInfo().

GetInt() [4/4]

const CSubsequence_Base::TInt & CSubsequence_Base::GetInt ( void  ) const

inline

Get the Int member data.

Returns

Reference to the member data.

Definition at line 351 of file Subsequence_.hpp.

References CSubsequence_Base::m_Int, and CSubsequence_Base::ResetInt().

GetInv()

const CSimpleVariant_Base::C_Type::TInv & CSimpleVariant_Base::C_Type::GetInv

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 300 of file SimpleVariant_.cpp.

GetLength()

const CCtermExtension_Base::TLength & CCtermExtension_Base::GetLength ( void  ) const

inline

Get the Length member data.

Returns

Reference to the member data.

Definition at line 349 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_Length, and CCtermExtension_Base::ResetLength().

GetLoc() [1/7]

const CConversion_Base::TLoc & CConversion_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 210 of file Conversion_.hpp.

References CConversion_Base::m_Loc, and CConversion_Base::ResetLoc().

GetLoc() [2/7]

const CDeletion_Base::TLoc & CDeletion_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 216 of file Deletion_.hpp.

References CDeletion_Base::m_Loc, and CDeletion_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateDeletionVarref(), and CHgvsProtIrepReader::x_CreateProteinDelVarref().

GetLoc() [3/7]

const CDelins_Base::TLoc & CDelins_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 549 of file Delins_.hpp.

References CDelins_Base::m_Loc, and CDelins_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateDelinsVarref(), CHgvsProtIrepReader::x_CreateDelinsVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

GetLoc() [4/7]

const CDuplication_Base::TLoc & CDuplication_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 216 of file Duplication_.hpp.

References CDuplication_Base::m_Loc, and CDuplication_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateDuplicationVarref(), and CHgvsProtIrepReader::x_CreateProteinDupVarref().

GetLoc() [5/7]

const CNaIdentity_Base::TLoc & CNaIdentity_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 215 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_Loc, and CNaIdentity_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateNaIdentityVarref().

GetLoc() [6/7]

const CNaSub_Base::TLoc & CNaSub_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 256 of file NaSub_.hpp.

References CNaSub_Base::m_Loc, and CNaSub_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateSubstVarref().

GetLoc() [7/7]

const CRepeat_Base::TLoc & CRepeat_Base::GetLoc ( void  ) const

inline

Get the Loc member data.

Returns

Reference to the member data.

Definition at line 257 of file Repeat_.hpp.

References CRepeat_Base::m_Loc, and CRepeat_Base::ResetLoc().

Referenced by CHgvsNaIrepReader::x_CreateSSRVarref(), and CHgvsProtIrepReader::x_CreateSSRVarref().

GetNa_identity()

const CSimpleVariant_Base::C_Type::TNa_identity & CSimpleVariant_Base::C_Type::GetNa_identity

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 168 of file SimpleVariant_.cpp.

GetNa_sub()

const CSimpleVariant_Base::C_Type::TNa_sub & CSimpleVariant_Base::C_Type::GetNa_sub

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 190 of file SimpleVariant_.cpp.

GetNewAa() [1/2]

const CCtermExtension_Base::TNewAa & CCtermExtension_Base::GetNewAa ( void  ) const

inline

Get the NewAa member data.

Returns

Reference to the member data.

Definition at line 302 of file CtermExtension_.hpp.

References CCtermExtension_Base::CanGetNewAa(), CCtermExtension_Base::m_NewAa, and CSerialObject::ThrowUnassigned().

GetNewAa() [2/2]

const CNtermExtension_Base::TNewAa & CNtermExtension_Base::GetNewAa ( void  ) const

inline

Get the NewAa member data.

Returns

Reference to the member data.

Definition at line 245 of file NtermExtension_.hpp.

References CNtermExtension_Base::CanGetNewAa(), CNtermExtension_Base::m_NewAa, and CSerialObject::ThrowUnassigned().

GetNewStart()

const CNtermExtension_Base::TNewStart & CNtermExtension_Base::GetNewStart ( void  ) const

inline

Get the NewStart member data.

Returns

Reference to the member data.

Definition at line 215 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_NewStart, and CNtermExtension_Base::ResetNewStart().

GetNterm_ext()

const CProteinExtension_Base::TNterm_ext & CProteinExtension_Base::GetNterm_ext

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 102 of file ProteinExtension_.cpp.

References CProteinExtension_Base::CheckSelected(), CProteinExtension_Base::e_Nterm_ext, and CProteinExtension_Base::m_object.

GetNtint() [1/2]

const CInversion_Base::TNtint & CInversion_Base::GetNtint ( void  ) const

inline

Get the Ntint member data.

Returns

Reference to the member data.

Definition at line 256 of file Inversion_.hpp.

References CInversion_Base::m_Ntint, and CInversion_Base::ResetNtint().

Referenced by CHgvsNaIrepReader::x_CreateInversionVarref().

GetNtint() [2/2]

const CSeqInterval_Base::TNtint & CSeqInterval_Base::GetNtint

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 124 of file SeqInterval_.cpp.

References CSeqInterval_Base::CheckSelected(), CSeqInterval_Base::e_Ntint, and CSeqInterval_Base::m_object.

Referenced by CHgvsNaIrepReader::x_CreateInsertionVarref().

GetNtloc()

const CSeqLocation_Base::TNtloc & CSeqLocation_Base::GetNtloc

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 124 of file SeqLocation_.cpp.

References CSeqLocation_Base::CheckSelected(), CSeqLocation_Base::e_Ntloc, and CSeqLocation_Base::m_object.

Referenced by CHgvsNaIrepReader::x_CreateDeletionVarref(), CHgvsNaIrepReader::x_CreateDelinsVarref(), CHgvsNaIrepReader::x_CreateDuplicationVarref(), CHgvsNaIrepReader::x_CreateSSRVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

GetNucleotide()

const CNaIdentity_Base::TNucleotide & CNaIdentity_Base::GetNucleotide ( void  ) const

inline

Get the Nucleotide member data.

Returns

Reference to the member data.

Definition at line 245 of file NaIdentity_.hpp.

References CNaIdentity_Base::CanGetNucleotide(), CNaIdentity_Base::m_Nucleotide, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateNaIdentityVarref().

GetOffset()

const CNtSite_Base::TOffset & CNtSite_Base::GetOffset ( void  ) const

inline

Get the Offset member data.

Returns

Reference to the member data.

Definition at line 1190 of file NtSite_.hpp.

References CNtSite_Base::CanGetOffset(), CNtSite_Base::m_Offset, and CSerialObject::ThrowUnassigned().

Referenced by CIntronOffsetHelper::GetIntronOffset().

GetOrigin()

const CConversion_Base::TOrigin & CConversion_Base::GetOrigin ( void  ) const

inline

Get the Origin member data.

Returns

Reference to the member data.

Definition at line 240 of file Conversion_.hpp.

References CConversion_Base::m_Origin, and CConversion_Base::ResetOrigin().

GetProt_ext()

const CSimpleVariant_Base::C_Type::TProt_ext & CSimpleVariant_Base::C_Type::GetProt_ext

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 410 of file SimpleVariant_.cpp.

GetProt_silent()

const CSimpleVariant_Base::C_Type::TProt_silent & CSimpleVariant_Base::C_Type::GetProt_silent

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 234 of file SimpleVariant_.cpp.

GetProt_sub()

const CSimpleVariant_Base::C_Type::TProt_sub & CSimpleVariant_Base::C_Type::GetProt_sub

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 212 of file SimpleVariant_.cpp.

GetRange() [1/4]

const CAaLocation_Base::TRange & CAaLocation_Base::GetRange

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 130 of file AaLocation_.cpp.

References CAaLocation_Base::CheckSelected(), CAaLocation_Base::e_Range, and CAaLocation_Base::m_object.

GetRange() [2/4]

const CCount_Base::TRange & CCount_Base::GetRange

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 298 of file Count_.cpp.

References CCount_Base::CheckSelected(), CCount_Base::e_Range, and CCount_Base::m_object.

GetRange() [3/4]

const CNtIntLimit_Base::TRange & CNtIntLimit_Base::GetRange

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 124 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::CheckSelected(), CNtIntLimit_Base::e_Range, and CNtIntLimit_Base::m_object.

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), CNaSeqlocHelper::x_ComputeSiteIndex(), CHgvsNaIrepReader::x_CreateConversionVarref(), CNaSeqlocHelper::x_CreateSeqloc(), and CNaSeqlocHelper::x_GetStrand().

GetRange() [4/4]

const CNtLocation_Base::TRange & CNtLocation_Base::GetRange

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 130 of file NtLocation_.cpp.

References CNtLocation_Base::CheckSelected(), CNtLocation_Base::e_Range, and CNtLocation_Base::m_object.

Referenced by CNaSeqlocHelper::CreateSeqloc().

GetRaw_seq() [1/6]

const CDeletion_Base::TRaw_seq & CDeletion_Base::GetRaw_seq ( void  ) const

inline

Get the Raw_seq member data.

Returns

Reference to the member data.

Definition at line 246 of file Deletion_.hpp.

References CDeletion_Base::CanGetRaw_seq(), CDeletion_Base::m_Raw_seq, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateDeletionVarref().

GetRaw_seq() [2/6]

const CDelins_Base::C_Inserted_seq_info::TRaw_seq & CDelins_Base::C_Inserted_seq_info::GetRaw_seq ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 511 of file Delins_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateDelinsSubvarref(), CHgvsNaIrepReader::x_CreateDelinsVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

GetRaw_seq() [3/6]

const CDuplication_Base::TRaw_seq & CDuplication_Base::GetRaw_seq ( void  ) const

inline

Get the Raw_seq member data.

Returns

Reference to the member data.

Definition at line 246 of file Duplication_.hpp.

References CDuplication_Base::CanGetRaw_seq(), CDuplication_Base::m_Raw_seq, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateDuplicationVarref().

GetRaw_seq() [4/6]

const CInsertion_Base::C_Seqinfo::TRaw_seq & CInsertion_Base::C_Seqinfo::GetRaw_seq ( void  ) const

inline

Get the variant data.

Returns

Reference to the data.

Definition at line 469 of file Insertion_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateInsertionSubvarref(), and CHgvsNaIrepReader::x_CreateInsertionVarref().

GetRaw_seq() [5/6]

const CInversion_Base::TRaw_seq & CInversion_Base::GetRaw_seq ( void  ) const

inline

Get the Raw_seq member data.

Returns

Reference to the member data.

Definition at line 286 of file Inversion_.hpp.

References CInversion_Base::CanGetRaw_seq(), CInversion_Base::m_Raw_seq, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateInversionVarref().

GetRaw_seq() [6/6]

const CRepeat_Base::TRaw_seq & CRepeat_Base::GetRaw_seq ( void  ) const

inline

Get the Raw_seq member data.

Returns

Reference to the member data.

Definition at line 317 of file Repeat_.hpp.

References CRepeat_Base::CanGetRaw_seq(), CRepeat_Base::m_Raw_seq, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateSSRVarref().

GetReference_id()

const CVariantExpression_Base::TReference_id & CVariantExpression_Base::GetReference_id ( void  ) const

inline

Get the Reference_id member data.

Returns

Reference to the member data.

Definition at line 306 of file VariantExpression_.hpp.

References CVariantExpression_Base::CanGetReference_id(), CVariantExpression_Base::m_Reference_id, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::CreateSeqfeat(), and CHgvsProtIrepReader::CreateSeqfeat().

GetRefStop()

CCtermExtension_Base::TRefStop CCtermExtension_Base::GetRefStop ( void  ) const

inline

Get the RefStop member data.

Returns

Copy of the member data.

Definition at line 262 of file CtermExtension_.hpp.

References CCtermExtension_Base::CanGetRefStop(), CCtermExtension_Base::m_RefStop, and CSerialObject::ThrowUnassigned().

GetRepeat()

const CSimpleVariant_Base::C_Type::TRepeat & CSimpleVariant_Base::C_Type::GetRepeat

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 388 of file SimpleVariant_.cpp.

GetSeqid()

const CNtSite_Base::TSeqid & CNtSite_Base::GetSeqid ( void  ) const

inline

Get the Seqid member data.

Returns

Reference to the member data.

Definition at line 1066 of file NtSite_.hpp.

References CNtSite_Base::CanGetSeqid(), CNtSite_Base::m_Seqid, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateConversionVarref().

GetSeqinfo()

const CInsertion_Base::TSeqinfo & CInsertion_Base::GetSeqinfo ( void  ) const

inline

Get the Seqinfo member data.

Returns

Reference to the member data.

Definition at line 537 of file Insertion_.hpp.

References CInsertion_Base::m_Seqinfo, and CInsertion_Base::ResetSeqinfo().

Referenced by CHgvsNaIrepReader::x_CreateInsertionVarref(), and CHgvsProtIrepReader::x_CreateInsertionVarref().

GetSeqtype() [1/2]

CNtSite_Base::TSeqtype CNtSite_Base::GetSeqtype ( void  ) const

inline

Get the Seqtype member data.

Returns

Copy of the member data.

Definition at line 1120 of file NtSite_.hpp.

References CNtSite_Base::CanGetSeqtype(), CNtSite_Base::m_Seqtype, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateConversionVarref().

GetSeqtype() [2/2]

CSequenceVariant_Base::TSeqtype CSequenceVariant_Base::GetSeqtype ( void  ) const

inline

Get the Seqtype member data.

Returns

Copy of the member data.

Definition at line 264 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::CanGetSeqtype(), CSequenceVariant_Base::m_Seqtype, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::CreateSeqfeat().

GetSequence_variant()

const CVariantExpression_Base::TSequence_variant & CVariantExpression_Base::GetSequence_variant ( void  ) const

inline

Get the Sequence_variant member data.

Returns

Reference to the member data.

Definition at line 353 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Sequence_variant, and CVariantExpression_Base::ResetSequence_variant().

Referenced by CHgvsNaIrepReader::CreateSeqfeat(), and CHgvsProtIrepReader::CreateSeqfeat().

GetSimple()

const CVariant_Base::TSimple & CVariant_Base::GetSimple

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 100 of file Variant_.cpp.

References CVariant_Base::CheckSelected(), CVariant_Base::e_Simple, and CVariant_Base::m_object.

GetSisters()

CSimpleVariantSeq_Base::TSisters CSimpleVariantSeq_Base::GetSisters ( void  ) const

inline

Get the Sisters member data.

Returns

Copy of the member data.

Definition at line 293 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_Sisters.

GetSite() [1/3]

const CAaLocation_Base::TSite & CAaLocation_Base::GetSite

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 108 of file AaLocation_.cpp.

References CAaLocation_Base::CheckSelected(), CAaLocation_Base::e_Site, and CAaLocation_Base::m_object.

Referenced by CProtSeqlocHelper::CreateSeqloc(), and CAaLocation::GetString().

GetSite() [2/3]

const CNtIntLimit_Base::TSite & CNtIntLimit_Base::GetSite

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 102 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::CheckSelected(), CNtIntLimit_Base::e_Site, and CNtIntLimit_Base::m_object.

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), CNaSeqlocHelper::x_ComputeSiteIndex(), CHgvsNaIrepReader::x_CreateConversionVarref(), CNaSeqlocHelper::x_CreateSeqloc(), and CNaSeqlocHelper::x_GetStrand().

GetSite() [3/3]

const CNtLocation_Base::TSite & CNtLocation_Base::GetSite

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 108 of file NtLocation_.cpp.

References CNtLocation_Base::CheckSelected(), CNtLocation_Base::e_Site, and CNtLocation_Base::m_object.

Referenced by CNaSeqlocHelper::CreateSeqloc(), CIntronOffsetHelper::GetStartIntronOffset(), CHgvsNaIrepReader::x_CreateNaIdentityVarref(), and CHgvsNaIrepReader::x_CreateSubstVarref().

GetSize()

CInversion_Base::TSize CInversion_Base::GetSize ( void  ) const

inline

Get the Size member data.

Returns

Copy of the member data.

Definition at line 340 of file Inversion_.hpp.

References CInversion_Base::CanGetSize(), CInversion_Base::m_Size, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsNaIrepReader::x_CreateInversionVarref().

GetSpecial()

CVariant_Base::TSpecial CVariant_Base::GetSpecial ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 276 of file Variant_.hpp.

References CVariant_Base::CheckSelected(), CVariant_Base::e_Special, and CVariant_Base::m_Special.

GetStart() [1/5]

const CAaInterval_Base::TStart & CAaInterval_Base::GetStart ( void  ) const

inline

Get the Start member data.

Returns

Reference to the member data.

Definition at line 210 of file AaInterval_.hpp.

References CAaInterval_Base::m_Start, and CAaInterval_Base::ResetStart().

Referenced by CProtSeqlocHelper::CreateSeqloc(), CAaInterval::GetString(), s_IntervalLimitsReversed(), CAaInterval::size(), CHgvsProtIrepReader::x_CreateIdentitySubvarref(), and CHgvsProtIrepReader::x_CreateVarrefFromLoc().

GetStart() [2/5]

const CAaSiteRange_Base::TStart & CAaSiteRange_Base::GetStart ( void  ) const

inline

Get the Start member data.

Returns

Reference to the member data.

Definition at line 210 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Start, and CAaSiteRange_Base::ResetStart().

GetStart() [3/5]

const CCount_Base::C_Range::TStart & CCount_Base::C_Range::GetStart ( void  ) const

inline

Get the Start member data.

Returns

Reference to the member data.

Definition at line 809 of file Count_.hpp.

References CCount_Base::C_Range::m_Start, and CCount_Base::C_Range::ResetStart().

GetStart() [4/5]

const CNtInterval_Base::TStart & CNtInterval_Base::GetStart ( void  ) const

inline

Get the Start member data.

Returns

Reference to the member data.

Definition at line 210 of file NtInterval_.hpp.

References CNtInterval_Base::m_Start, and CNtInterval_Base::ResetStart().

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), s_SetSequenceInfo(), CNaSeqlocHelper::x_CreateSeqloc(), and CNaSeqlocHelper::x_GetStrand().

GetStart() [5/5]

const CNtSiteRange_Base::TStart & CNtSiteRange_Base::GetStart ( void  ) const

inline

Get the Start member data.

Returns

Reference to the member data.

Definition at line 210 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Start, and CNtSiteRange_Base::ResetStart().

Referenced by CIntronOffsetHelper::GetIntronOffset(), CNaSeqlocHelper::x_ComputeSiteIndex(), CHgvsNaIrepReader::x_CreateConversionVarref(), CNaSeqlocHelper::x_CreateIntFuzz(), CNaSeqlocHelper::x_CreateSeqloc(), and CNaSeqlocHelper::x_GetStrand().

GetStop() [1/5]

const CAaInterval_Base::TStop & CAaInterval_Base::GetStop ( void  ) const

inline

Get the Stop member data.

Returns

Reference to the member data.

Definition at line 240 of file AaInterval_.hpp.

References CAaInterval_Base::m_Stop, and CAaInterval_Base::ResetStop().

Referenced by CProtSeqlocHelper::CreateSeqloc(), CAaInterval::GetString(), s_IntervalLimitsReversed(), CAaInterval::size(), CHgvsProtIrepReader::x_CreateIdentitySubvarref(), and CHgvsProtIrepReader::x_CreateVarrefFromLoc().

GetStop() [2/5]

const CAaSiteRange_Base::TStop & CAaSiteRange_Base::GetStop ( void  ) const

inline

Get the Stop member data.

Returns

Reference to the member data.

Definition at line 240 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Stop, and CAaSiteRange_Base::ResetStop().

GetStop() [3/5]

const CCount_Base::C_Range::TStop & CCount_Base::C_Range::GetStop ( void  ) const

inline

Get the Stop member data.

Returns

Reference to the member data.

Definition at line 839 of file Count_.hpp.

References CCount_Base::C_Range::m_Stop, and CCount_Base::C_Range::ResetStop().

GetStop() [4/5]

const CNtInterval_Base::TStop & CNtInterval_Base::GetStop ( void  ) const

inline

Get the Stop member data.

Returns

Reference to the member data.

Definition at line 240 of file NtInterval_.hpp.

References CNtInterval_Base::m_Stop, and CNtInterval_Base::ResetStop().

Referenced by CIntronOffsetHelper::GetStopIntronOffset(), s_SetSequenceInfo(), and CNaSeqlocHelper::x_CreateSeqloc().

GetStop() [5/5]

const CNtSiteRange_Base::TStop & CNtSiteRange_Base::GetStop ( void  ) const

inline

Get the Stop member data.

Returns

Reference to the member data.

Definition at line 240 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Stop, and CNtSiteRange_Base::ResetStop().

Referenced by CIntronOffsetHelper::GetIntronOffset(), CNaSeqlocHelper::x_ComputeSiteIndex(), CNaSeqlocHelper::x_CreateIntFuzz(), and CNaSeqlocHelper::x_CreateSeqloc().

GetStrand_minus()

CNtSite_Base::TStrand_minus CNtSite_Base::GetStrand_minus ( void  ) const

inline

Get the Strand_minus member data.

Returns

Copy of the member data.

Definition at line 1245 of file NtSite_.hpp.

References CNtSite_Base::m_Strand_minus.

Referenced by CNaSeqlocHelper::x_GetStrand().

GetSubseq() [1/2]

const CDelins_Base::C_Inserted_seq_info::TSubseq & CDelins_Base::C_Inserted_seq_info::GetSubseq

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 147 of file Delins_.cpp.

GetSubseq() [2/2]

const CInsertion_Base::C_Seqinfo::TSubseq & CInsertion_Base::C_Seqinfo::GetSubseq

(

void

)

const

Get the variant data.

Returns

Reference to the data.

Definition at line 147 of file Insertion_.cpp.

GetSubvariants()

const CSequenceVariant_Base::TSubvariants & CSequenceVariant_Base::GetSubvariants ( void  ) const

inline

Get the Subvariants member data.

Returns

Reference to the member data.

Definition at line 304 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_Subvariants.

Referenced by CHgvsNaIrepReader::CreateSeqfeat(), and CHgvsProtIrepReader::CreateSeqfeat().

GetType() [1/3]

CProteinSub_Base::TType CProteinSub_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Copy of the member data.

Definition at line 271 of file ProteinSub_.hpp.

References CProteinSub_Base::CanGetType(), CProteinSub_Base::m_Type, and CSerialObject::ThrowUnassigned().

Referenced by CHgvsProtIrepReader::x_CreateProteinSubstVarref().

GetType() [2/3]

const CSimpleVariant_Base::TType & CSimpleVariant_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Reference to the member data.

Definition at line 789 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Type, and CSimpleVariant_Base::ResetType().

Referenced by CProtSeqlocHelper::CreateSeqloc(), CNaSeqlocHelper::CreateSeqloc(), CHgvsNaIrepReader::x_CreateVarref(), and CHgvsProtIrepReader::x_CreateVarref().

GetType() [3/3]

CSubsequence_Base::TType CSubsequence_Base::GetType ( void  ) const

inline

Get the Type member data.

Returns

Copy of the member data.

Definition at line 311 of file Subsequence_.hpp.

References CSubsequence_Base::CanGetType(), CSubsequence_Base::m_Type, and CSerialObject::ThrowUnassigned().

GetUtr()

const CNtSite_Base::TUtr & CNtSite_Base::GetUtr ( void  ) const

inline

Get the Utr member data.

Returns

Reference to the member data.

Definition at line 1211 of file NtSite_.hpp.

References CNtSite_Base::CanGetUtr(), CNtSite_Base::m_Utr, and CSerialObject::ThrowUnassigned().

Referenced by CNaSeqlocHelper::x_ComputeSiteIndex().

GetVal() [1/5]

CCount_Base::C_Range::C_Start::TVal CCount_Base::C_Range::C_Start::GetVal ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 696 of file Count_.hpp.

References CCount_Base::CheckSelected(), CCount_Base::e_Val, and CCount_Base::m_Val.

GetVal() [2/5]

CCount_Base::C_Range::C_Stop::TVal CCount_Base::C_Range::C_Stop::GetVal ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 764 of file Count_.hpp.

References CCount_Base::CheckSelected(), CCount_Base::e_Val, and CCount_Base::m_Val.

GetVal() [3/5]

CCount_Base::TVal CCount_Base::GetVal ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 904 of file Count_.hpp.

References CCount_Base::CheckSelected(), CCount_Base::e_Val, and CCount_Base::m_Val.

GetVal() [4/5]

CNtSite_Base::C_Base::TVal CNtSite_Base::C_Base::GetVal ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 888 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset(), and CNaSeqlocHelper::x_ComputeSiteIndex().

GetVal() [5/5]

CNtSite_Base::C_Offset::TVal CNtSite_Base::C_Offset::GetVal ( void  ) const

inline

Get the variant data.

Returns

Copy of the variant data.

Definition at line 956 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset().

GetVariants()

const CSimpleVariantSeq_Base::TVariants & CSimpleVariantSeq_Base::GetVariants ( void  ) const

inline

Get the Variants member data.

Returns

Reference to the member data.

Definition at line 255 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_Variants.

IsAaint()

bool CSeqInterval_Base::IsAaint ( void  ) const

inline

Check if variant Aaint is selected.

Aaint type is defined as 'typedef CAaInterval TAaint'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 257 of file SeqInterval_.hpp.

References CSeqInterval_Base::e_Aaint, and CSeqInterval_Base::m_choice.

IsAaloc()

bool CSeqLocation_Base::IsAaloc ( void  ) const

inline

Check if variant Aaloc is selected.

Aaloc type is defined as 'typedef CAaLocation TAaloc'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 257 of file SeqLocation_.hpp.

References CSeqLocation_Base::e_Aaloc, and CSeqLocation_Base::m_choice.

IsAasite()

bool CFrameshift_Base::IsAasite ( void  ) const

inline

Check if variant Aasite is selected.

Aasite type is defined as 'typedef CAaSite TAasite'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 242 of file Frameshift_.hpp.

References CFrameshift_Base::e_Aasite, and CFrameshift_Base::m_choice.

IsConv()

bool CSimpleVariant_Base::C_Type::IsConv ( void  ) const

inline

Check if variant Conv is selected.

Conv type is defined as 'typedef CConversion TConv'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 747 of file SimpleVariant_.hpp.

IsCount() [1/2]

bool CDelins_Base::C_Inserted_seq_info::IsCount ( void  ) const

inline

Check if variant Count is selected.

Count type is defined as 'typedef CCount TCount'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 525 of file Delins_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateDelinsSubvarref().

IsCount() [2/2]

bool CInsertion_Base::C_Seqinfo::IsCount ( void  ) const

inline

Check if variant Count is selected.

Count type is defined as 'typedef CCount TCount'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 483 of file Insertion_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateInsertionSubvarref().

IsCterm_ext()

bool CProteinExtension_Base::IsCterm_ext ( void  ) const

inline

Check if variant Cterm_ext is selected.

Cterm_ext type is defined as 'typedef CCtermExtension TCterm_ext'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 263 of file ProteinExtension_.hpp.

References CProteinExtension_Base::e_Cterm_ext, and CProteinExtension_Base::m_choice.

IsDel()

bool CSimpleVariant_Base::C_Type::IsDel ( void  ) const

inline

Check if variant Del is selected.

Del type is defined as 'typedef CDeletion TDel'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 723 of file SimpleVariant_.hpp.

IsDelins()

bool CSimpleVariant_Base::C_Type::IsDelins ( void  ) const

inline

Check if variant Delins is selected.

Delins type is defined as 'typedef CDelins TDelins'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 753 of file SimpleVariant_.hpp.

IsDup()

bool CSimpleVariant_Base::C_Type::IsDup ( void  ) const

inline

Check if variant Dup is selected.

Dup type is defined as 'typedef CDuplication TDup'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 729 of file SimpleVariant_.hpp.

IsFive_prime()

bool CNtSite_Base::C_Utr::IsFive_prime ( void  ) const

inline

Check if variant Five_prime is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 1030 of file NtSite_.hpp.

Referenced by CNaSeqlocHelper::x_ComputeSiteIndex().

IsFrameshift()

bool CSimpleVariant_Base::C_Type::IsFrameshift ( void  ) const

inline

Check if variant Frameshift is selected.

Frameshift type is defined as 'typedef CFrameshift TFrameshift'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 771 of file SimpleVariant_.hpp.

IsFuzzy_val()

bool CCount_Base::IsFuzzy_val ( void  ) const

inline

Check if variant Fuzzy_val is selected.

Fuzzy_val type is defined as 'typedef TSeqPos TFuzzy_val'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 925 of file Count_.hpp.

References CCount_Base::e_Fuzzy_val, and CCount_Base::m_choice.

IsIdentifier() [1/2]

bool CDelins_Base::C_Inserted_seq_info::IsIdentifier ( void  ) const

inline

Check if variant Identifier is selected.

Identifier type is defined as 'typedef string TIdentifier'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 485 of file Delins_.hpp.

IsIdentifier() [2/2]

bool CInsertion_Base::C_Seqinfo::IsIdentifier ( void  ) const

inline

Check if variant Identifier is selected.

Identifier type is defined as 'typedef string TIdentifier'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 443 of file Insertion_.hpp.

IsIns()

bool CSimpleVariant_Base::C_Type::IsIns ( void  ) const

inline

Check if variant Ins is selected.

Ins type is defined as 'typedef CInsertion TIns'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 741 of file SimpleVariant_.hpp.

IsInt() [1/2]

bool CAaLocation_Base::IsInt ( void  ) const

inline

Check if variant Int is selected.

Int type is defined as 'typedef CAaInterval TInt'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 298 of file AaLocation_.hpp.

References CAaLocation_Base::e_Int, and CAaLocation_Base::m_choice.

Referenced by CProtSeqlocHelper::CreateSeqloc(), CHgvsProtIrepReader::x_CreateIdentitySubvarref(), and CHgvsProtIrepReader::x_CreateVarrefFromLoc().

IsInt() [2/2]

bool CNtLocation_Base::IsInt ( void  ) const

inline

Check if variant Int is selected.

Int type is defined as 'typedef CNtInterval TInt'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 298 of file NtLocation_.hpp.

References CNtLocation_Base::e_Int, and CNtLocation_Base::m_choice.

Referenced by CNaSeqlocHelper::CreateSeqloc(), CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), and s_SetSequenceInfo().

IsInv()

bool CSimpleVariant_Base::C_Type::IsInv ( void  ) const

inline

Check if variant Inv is selected.

Inv type is defined as 'typedef CInversion TInv'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 735 of file SimpleVariant_.hpp.

IsMinus_unknown()

bool CNtSite_Base::C_Offset::IsMinus_unknown ( void  ) const

inline

Check if variant Minus_unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 989 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset().

IsNa_identity()

bool CSimpleVariant_Base::C_Type::IsNa_identity ( void  ) const

inline

Check if variant Na_identity is selected.

Na_identity type is defined as 'typedef CNaIdentity TNa_identity'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 699 of file SimpleVariant_.hpp.

IsNa_sub()

bool CSimpleVariant_Base::C_Type::IsNa_sub ( void  ) const

inline

Check if variant Na_sub is selected.

Na_sub type is defined as 'typedef CNaSub TNa_sub'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 705 of file SimpleVariant_.hpp.

IsNterm_ext()

bool CProteinExtension_Base::IsNterm_ext ( void  ) const

inline

Check if variant Nterm_ext is selected.

Nterm_ext type is defined as 'typedef CNtermExtension TNterm_ext'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 257 of file ProteinExtension_.hpp.

References CProteinExtension_Base::e_Nterm_ext, and CProteinExtension_Base::m_choice.

IsNtint()

bool CSeqInterval_Base::IsNtint ( void  ) const

inline

Check if variant Ntint is selected.

Ntint type is defined as 'typedef CNtInterval TNtint'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 263 of file SeqInterval_.hpp.

References CSeqInterval_Base::e_Ntint, and CSeqInterval_Base::m_choice.

IsNtloc()

bool CSeqLocation_Base::IsNtloc ( void  ) const

inline

Check if variant Ntloc is selected.

Ntloc type is defined as 'typedef CNtLocation TNtloc'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 263 of file SeqLocation_.hpp.

References CSeqLocation_Base::e_Ntloc, and CSeqLocation_Base::m_choice.

IsPlus_unknown()

bool CNtSite_Base::C_Offset::IsPlus_unknown ( void  ) const

inline

Check if variant Plus_unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 977 of file NtSite_.hpp.

IsProt_ext()

bool CSimpleVariant_Base::C_Type::IsProt_ext ( void  ) const

inline

Check if variant Prot_ext is selected.

Prot_ext type is defined as 'typedef CProteinExtension TProt_ext'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 765 of file SimpleVariant_.hpp.

IsProt_silent()

bool CSimpleVariant_Base::C_Type::IsProt_silent ( void  ) const

inline

Check if variant Prot_silent is selected.

Prot_silent type is defined as 'typedef CAaLocation TProt_silent'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 717 of file SimpleVariant_.hpp.

IsProt_sub()

bool CSimpleVariant_Base::C_Type::IsProt_sub ( void  ) const

inline

Check if variant Prot_sub is selected.

Prot_sub type is defined as 'typedef CProteinSub TProt_sub'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 711 of file SimpleVariant_.hpp.

IsRange() [1/4]

bool CAaLocation_Base::IsRange ( void  ) const

inline

Check if variant Range is selected.

Range type is defined as 'typedef CAaSiteRange TRange'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 292 of file AaLocation_.hpp.

References CAaLocation_Base::e_Range, and CAaLocation_Base::m_choice.

IsRange() [2/4]

bool CCount_Base::IsRange ( void  ) const

inline

Check if variant Range is selected.

Range type is defined as 'typedef C_Range TRange'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 952 of file Count_.hpp.

References CCount_Base::e_Range, and CCount_Base::m_choice.

IsRange() [3/4]

bool CNtIntLimit_Base::IsRange ( void  ) const

inline

Check if variant Range is selected.

Range type is defined as 'typedef CNtSiteRange TRange'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 263 of file NtIntLimit_.hpp.

References CNtIntLimit_Base::e_Range, and CNtIntLimit_Base::m_choice.

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), CHgvsNaIrepReader::x_CreateConversionVarref(), and CNaSeqlocHelper::x_CreateSeqloc().

IsRange() [4/4]

bool CNtLocation_Base::IsRange ( void  ) const

inline

Check if variant Range is selected.

Range type is defined as 'typedef CNtSiteRange TRange'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 292 of file NtLocation_.hpp.

References CNtLocation_Base::e_Range, and CNtLocation_Base::m_choice.

Referenced by AssignNtInterval(), CNaSeqlocHelper::CreateSeqloc(), and s_SetSequenceInfo().

IsRaw_seq() [1/2]

bool CDelins_Base::C_Inserted_seq_info::IsRaw_seq ( void  ) const

inline

Check if variant Raw_seq is selected.

Raw_seq type is defined as 'typedef string TRaw_seq'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 505 of file Delins_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateDelinsSubvarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

IsRaw_seq() [2/2]

bool CInsertion_Base::C_Seqinfo::IsRaw_seq ( void  ) const

inline

Check if variant Raw_seq is selected.

Raw_seq type is defined as 'typedef string TRaw_seq'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 463 of file Insertion_.hpp.

Referenced by CHgvsProtIrepReader::x_CreateInsertionSubvarref().

IsRepeat()

bool CSimpleVariant_Base::C_Type::IsRepeat ( void  ) const

inline

Check if variant Repeat is selected.

Repeat type is defined as 'typedef CRepeat TRepeat'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 759 of file SimpleVariant_.hpp.

IsSetAa()

bool CAaSite_Base::IsSetAa ( void  ) const

inline

Check if a value has been assigned to Aa data member.

Data member Aa is mandatory; its type is defined as 'typedef string TAa'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 246 of file AaSite_.hpp.

References CAaSite_Base::m_set_State.

Referenced by CAaSite_Base::CanGetAa(), IsMet1(), and CAaSite_Base::SetAa().

IsSetBase()

bool CNtSite_Base::IsSetBase ( void  ) const

inline

Check if a value has been assigned to Base data member.

Data member Base is mandatory; its type is defined as 'typedef C_Base TBase'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1148 of file NtSite_.hpp.

References CNtSite_Base::m_Base.

Referenced by CIntronOffsetHelper::GetIntronOffset(), and CNaSeqlocHelper::x_ComputeSiteIndex().

IsSetComplex()

bool CSequenceVariant_Base::IsSetComplex ( void  ) const

inline

Check if a value has been assigned to Complex data member.

Data member Complex is optional; its type is defined as 'typedef int TComplex'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 317 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_set_State.

Referenced by CSequenceVariant_Base::CanGetComplex(), and CSequenceVariant_Base::SetComplex().

IsSetCount()

bool CRepeat_Base::IsSetCount ( void  ) const

inline

Check if a value has been assigned to Count data member.

Data member Count is mandatory; its type is defined as 'typedef CCount TCount'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 275 of file Repeat_.hpp.

References CRepeat_Base::m_Count.

IsSetDeleted_raw_seq()

bool CDelins_Base::IsSetDeleted_raw_seq ( void  ) const

inline

can optionally specify the deleted sequence Check if a value has been assigned to Deleted_raw_seq data member.

Data member Deleted_raw_seq is optional; its type is defined as 'typedef string TDeleted_raw_seq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 567 of file Delins_.hpp.

References CDelins_Base::m_set_State.

Referenced by CDelins_Base::CanGetDeleted_raw_seq(), CDelins_Base::SetDeleted_raw_seq(), CHgvsNaIrepReader::x_CreateDelinsVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

IsSetFinal() [1/2]

bool CNaSub_Base::IsSetFinal ( void  ) const

inline

Check if a value has been assigned to Final data member.

Data member Final is mandatory; its type is defined as 'typedef string TFinal'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 321 of file NaSub_.hpp.

References CNaSub_Base::m_set_State.

Referenced by CNaSub_Base::CanGetFinal(), and CNaSub_Base::SetFinal().

IsSetFinal() [2/2]

bool CProteinSub_Base::IsSetFinal ( void  ) const

inline

Check if a value has been assigned to Final data member.

Data member Final is optional; its type is defined as 'typedef string TFinal'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 329 of file ProteinSub_.hpp.

References CProteinSub_Base::m_set_State.

Referenced by CProteinSub_Base::CanGetFinal(), and CProteinSub_Base::SetFinal().

IsSetFuzzy() [1/3]

bool CNtSite_Base::IsSetFuzzy ( void  ) const

inline

TRUE implies HGVS subexpression of the form (base + offset), Check if a value has been assigned to Fuzzy data member.

Data member Fuzzy is optional with default false; its type is defined as 'typedef bool TFuzzy'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1270 of file NtSite_.hpp.

References CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::SetFuzzy(), and CNaSeqlocHelper::x_CreateSeqloc().

IsSetFuzzy() [2/3]

bool CSimpleVariant_Base::IsSetFuzzy ( void  ) const

inline

Check if a value has been assigned to Fuzzy data member.

Data member Fuzzy is optional with default false; its type is defined as 'typedef bool TFuzzy'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 807 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_set_State.

Referenced by CSimpleVariant_Base::SetFuzzy(), CHgvsNaIrepReader::x_CreateVarref(), and CHgvsProtIrepReader::x_CreateVarref().

IsSetFuzzy() [3/3]

bool CSimpleVariantSeq_Base::IsSetFuzzy ( void  ) const

inline

Check if a value has been assigned to Fuzzy data member.

Data member Fuzzy is optional with default false; its type is defined as 'typedef bool TFuzzy'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 318 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State.

Referenced by CSimpleVariantSeq_Base::SetFuzzy().

IsSetFuzzy_offset()

bool CNtSite_Base::IsSetFuzzy_offset ( void  ) const

inline

TRUE implies HGVS subexpression of the form base+(offset) Check if a value has been assigned to Fuzzy_offset data member.

Data member Fuzzy_offset is optional with default false; its type is defined as 'typedef bool TFuzzy_offset'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1320 of file NtSite_.hpp.

References CNtSite_Base::m_set_State.

Referenced by CIntronOffsetHelper::GetIntronOffset(), and CNtSite_Base::SetFuzzy_offset().

IsSetIdentifier()

bool CSubsequence_Base::IsSetIdentifier ( void  ) const

inline

For example, an accession id Check if a value has been assigned to Identifier data member.

Data member Identifier is mandatory; its type is defined as 'typedef string TIdentifier'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 245 of file Subsequence_.hpp.

References CSubsequence_Base::m_set_State.

Referenced by CSubsequence_Base::CanGetIdentifier(), and CSubsequence_Base::SetIdentifier().

IsSetIndex()

bool CAaSite_Base::IsSetIndex ( void  ) const

inline

Check if a value has been assigned to Index data member.

Data member Index is mandatory; its type is defined as 'typedef TSeqPos TIndex'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 199 of file AaSite_.hpp.

References CAaSite_Base::m_set_State.

Referenced by CAaSite_Base::CanGetIndex(), IsMet1(), and CAaSite_Base::SetIndex().

IsSetInitial() [1/2]

bool CNaSub_Base::IsSetInitial ( void  ) const

inline

Check if a value has been assigned to Initial data member.

Data member Initial is mandatory; its type is defined as 'typedef string TInitial'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 274 of file NaSub_.hpp.

References CNaSub_Base::m_set_State.

Referenced by CNaSub_Base::CanGetInitial(), and CNaSub_Base::SetInitial().

IsSetInitial() [2/2]

bool CProteinSub_Base::IsSetInitial ( void  ) const

inline

Check if a value has been assigned to Initial data member.

Data member Initial is mandatory; its type is defined as 'typedef CAaSite TInitial'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 299 of file ProteinSub_.hpp.

References CProteinSub_Base::m_Initial.

IsSetInput_expr()

bool CVariantExpression_Base::IsSetInput_expr ( void  ) const

inline

contains the input expression to be parsed Check if a value has been assigned to Input_expr data member.

Data member Input_expr is mandatory; its type is defined as 'typedef string TInput_expr'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 247 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_set_State.

Referenced by CVariantExpression_Base::CanGetInput_expr(), and CVariantExpression_Base::SetInput_expr().

IsSetInserted_seq_info()

bool CDelins_Base::IsSetInserted_seq_info ( void  ) const

inline

Check if a value has been assigned to Inserted_seq_info data member.

Data member Inserted_seq_info is mandatory; its type is defined as 'typedef C_Inserted_seq_info TInserted_seq_info'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 614 of file Delins_.hpp.

References CDelins_Base::m_Inserted_seq_info.

IsSetInt() [1/2]

bool CInsertion_Base::IsSetInt ( void  ) const

inline

Check if a value has been assigned to Int data member.

Data member Int is mandatory; its type is defined as 'typedef CSeqInterval TInt'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 495 of file Insertion_.hpp.

References CInsertion_Base::m_Int.

IsSetInt() [2/2]

bool CSubsequence_Base::IsSetInt ( void  ) const

inline

Check if a value has been assigned to Int data member.

Data member Int is mandatory; its type is defined as 'typedef CSeqInterval TInt'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 339 of file Subsequence_.hpp.

References CSubsequence_Base::m_Int.

IsSetLength()

bool CCtermExtension_Base::IsSetLength ( void  ) const

inline

Check if a value has been assigned to Length data member.

Data member Length is mandatory; its type is defined as 'typedef CCount TLength'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 337 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_Length.

IsSetLoc() [1/7]

bool CConversion_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CNtLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 198 of file Conversion_.hpp.

References CConversion_Base::m_Loc.

IsSetLoc() [2/7]

bool CDeletion_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CSeqLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 204 of file Deletion_.hpp.

References CDeletion_Base::m_Loc.

IsSetLoc() [3/7]

bool CDelins_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CSeqLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 537 of file Delins_.hpp.

References CDelins_Base::m_Loc.

IsSetLoc() [4/7]

bool CDuplication_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CSeqLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 204 of file Duplication_.hpp.

References CDuplication_Base::m_Loc.

IsSetLoc() [5/7]

bool CNaIdentity_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CNtLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 203 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_Loc.

IsSetLoc() [6/7]

bool CNaSub_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CNtLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 244 of file NaSub_.hpp.

References CNaSub_Base::m_Loc.

IsSetLoc() [7/7]

bool CRepeat_Base::IsSetLoc ( void  ) const

inline

Check if a value has been assigned to Loc data member.

Data member Loc is mandatory; its type is defined as 'typedef CSeqLocation TLoc'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 245 of file Repeat_.hpp.

References CRepeat_Base::m_Loc.

IsSetNewAa() [1/2]

bool CCtermExtension_Base::IsSetNewAa ( void  ) const

inline

Check if a value has been assigned to NewAa data member.

Data member NewAa is mandatory; its type is defined as 'typedef string TNewAa'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 290 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_set_State.

Referenced by CCtermExtension_Base::CanGetNewAa(), and CCtermExtension_Base::SetNewAa().

IsSetNewAa() [2/2]

bool CNtermExtension_Base::IsSetNewAa ( void  ) const

inline

Check if a value has been assigned to NewAa data member.

Data member NewAa is optional; its type is defined as 'typedef string TNewAa'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 233 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_set_State.

Referenced by CNtermExtension_Base::CanGetNewAa(), and CNtermExtension_Base::SetNewAa().

IsSetNewStart()

bool CNtermExtension_Base::IsSetNewStart ( void  ) const

inline

Check if a value has been assigned to NewStart data member.

Data member NewStart is mandatory; its type is defined as 'typedef CCount TNewStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 203 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_NewStart.

IsSetNtint()

bool CInversion_Base::IsSetNtint ( void  ) const

inline

Check if a value has been assigned to Ntint data member.

Data member Ntint is mandatory; its type is defined as 'typedef CNtInterval TNtint'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 244 of file Inversion_.hpp.

References CInversion_Base::m_Ntint.

IsSetNucleotide()

bool CNaIdentity_Base::IsSetNucleotide ( void  ) const

inline

Check if a value has been assigned to Nucleotide data member.

Data member Nucleotide is optional; its type is defined as 'typedef string TNucleotide'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 233 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_set_State.

Referenced by CNaIdentity_Base::CanGetNucleotide(), CNaIdentity_Base::SetNucleotide(), and CHgvsNaIrepReader::x_CreateNaIdentityVarref().

IsSetOffset()

bool CNtSite_Base::IsSetOffset ( void  ) const

inline

Check if a value has been assigned to Offset data member.

Data member Offset is optional; its type is defined as 'typedef C_Offset TOffset'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1178 of file NtSite_.hpp.

References CNtSite_Base::m_Offset.

Referenced by CNtSite_Base::CanGetOffset(), CIntronOffsetHelper::GetIntronOffset(), and CNaSeqlocHelper::x_CreateSeqloc().

IsSetOrigin()

bool CConversion_Base::IsSetOrigin ( void  ) const

inline

Check if a value has been assigned to Origin data member.

Data member Origin is mandatory; its type is defined as 'typedef CNtLocation TOrigin'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 228 of file Conversion_.hpp.

References CConversion_Base::m_Origin.

IsSetRaw_seq() [1/4]

bool CDeletion_Base::IsSetRaw_seq ( void  ) const

inline

can optionally specify the deleted sequence Check if a value has been assigned to Raw_seq data member.

Data member Raw_seq is optional; its type is defined as 'typedef string TRaw_seq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 234 of file Deletion_.hpp.

References CDeletion_Base::m_set_State.

Referenced by CDeletion_Base::CanGetRaw_seq(), CDeletion_Base::SetRaw_seq(), and CHgvsNaIrepReader::x_CreateDeletionVarref().

IsSetRaw_seq() [2/4]

bool CDuplication_Base::IsSetRaw_seq ( void  ) const

inline

can optionally specify the sequence duplicated sequence Check if a value has been assigned to Raw_seq data member.

Data member Raw_seq is optional; its type is defined as 'typedef string TRaw_seq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 234 of file Duplication_.hpp.

References CDuplication_Base::m_set_State.

Referenced by CDuplication_Base::CanGetRaw_seq(), CDuplication_Base::SetRaw_seq(), and CHgvsNaIrepReader::x_CreateDuplicationVarref().

IsSetRaw_seq() [3/4]

bool CInversion_Base::IsSetRaw_seq ( void  ) const

inline

Check if a value has been assigned to Raw_seq data member.

Data member Raw_seq is optional; its type is defined as 'typedef string TRaw_seq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 274 of file Inversion_.hpp.

References CInversion_Base::m_set_State.

Referenced by CInversion_Base::CanGetRaw_seq(), CInversion_Base::SetRaw_seq(), and CHgvsNaIrepReader::x_CreateInversionVarref().

IsSetRaw_seq() [4/4]

bool CRepeat_Base::IsSetRaw_seq ( void  ) const

inline

Used if ntloc is a site, not an interval Check if a value has been assigned to Raw_seq data member.

Data member Raw_seq is optional; its type is defined as 'typedef string TRaw_seq'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 305 of file Repeat_.hpp.

References CRepeat_Base::m_set_State.

Referenced by CRepeat_Base::CanGetRaw_seq(), CRepeat_Base::SetRaw_seq(), and CHgvsNaIrepReader::x_CreateSSRVarref().

IsSetReference_id()

bool CVariantExpression_Base::IsSetReference_id ( void  ) const

inline

contains the accession id or other identifier for the reference sequence Check if a value has been assigned to Reference_id data member.

Data member Reference_id is mandatory; its type is defined as 'typedef string TReference_id'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 294 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_set_State.

Referenced by CVariantExpression_Base::CanGetReference_id(), and CVariantExpression_Base::SetReference_id().

IsSetRefStop()

bool CCtermExtension_Base::IsSetRefStop ( void  ) const

inline

Check if a value has been assigned to RefStop data member.

Data member RefStop is mandatory; its type is defined as 'typedef int TRefStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 243 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_set_State.

Referenced by CCtermExtension_Base::CanGetRefStop(), and CCtermExtension_Base::SetRefStop().

IsSetSeqid()

bool CNtSite_Base::IsSetSeqid ( void  ) const

inline

Check if a value has been assigned to Seqid data member.

Data member Seqid is optional; its type is defined as 'typedef string TSeqid'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1054 of file NtSite_.hpp.

References CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::CanGetSeqid(), and CNtSite_Base::SetSeqid().

IsSetSeqinfo()

bool CInsertion_Base::IsSetSeqinfo ( void  ) const

inline

Check if a value has been assigned to Seqinfo data member.

Data member Seqinfo is mandatory; its type is defined as 'typedef C_Seqinfo TSeqinfo'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 525 of file Insertion_.hpp.

References CInsertion_Base::m_Seqinfo.

IsSetSeqtype() [1/2]

bool CNtSite_Base::IsSetSeqtype ( void  ) const

inline

Check if a value has been assigned to Seqtype data member.

Data member Seqtype is optional; its type is defined as 'typedef int TSeqtype'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1101 of file NtSite_.hpp.

References CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::CanGetSeqtype(), and CNtSite_Base::SetSeqtype().

IsSetSeqtype() [2/2]

bool CSequenceVariant_Base::IsSetSeqtype ( void  ) const

inline

Check if a value has been assigned to Seqtype data member.

Data member Seqtype is mandatory; its type is defined as 'typedef int TSeqtype'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 245 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_set_State.

Referenced by CSequenceVariant_Base::CanGetSeqtype(), and CSequenceVariant_Base::SetSeqtype().

IsSetSequence_variant()

bool CVariantExpression_Base::IsSetSequence_variant ( void  ) const

inline

Check if a value has been assigned to Sequence_variant data member.

Data member Sequence_variant is mandatory; its type is defined as 'typedef CSequenceVariant TSequence_variant'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 341 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Sequence_variant.

IsSetSisters()

bool CSimpleVariantSeq_Base::IsSetSisters ( void  ) const

inline

Check if a value has been assigned to Sisters data member.

Data member Sisters is optional with default false; its type is defined as 'typedef bool TSisters'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 268 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State.

Referenced by CSimpleVariantSeq_Base::SetSisters().

IsSetSize()

bool CInversion_Base::IsSetSize ( void  ) const

inline

optionall specify the size of the inverted sequence Check if a value has been assigned to Size data member.

Data member Size is optional; its type is defined as 'typedef int TSize'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 321 of file Inversion_.hpp.

References CInversion_Base::m_set_State.

Referenced by CInversion_Base::CanGetSize(), CInversion_Base::SetSize(), and CHgvsNaIrepReader::x_CreateInversionVarref().

IsSetStart() [1/5]

bool CAaInterval_Base::IsSetStart ( void  ) const

inline

Check if a value has been assigned to Start data member.

Data member Start is mandatory; its type is defined as 'typedef CAaSite TStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 198 of file AaInterval_.hpp.

References CAaInterval_Base::m_Start.

Referenced by CProtSeqlocHelper::CreateSeqloc().

IsSetStart() [2/5]

bool CAaSiteRange_Base::IsSetStart ( void  ) const

inline

Check if a value has been assigned to Start data member.

Data member Start is mandatory; its type is defined as 'typedef CAaSite TStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 198 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Start.

IsSetStart() [3/5]

bool CCount_Base::C_Range::IsSetStart ( void  ) const

inline

Check if a value has been assigned to Start data member.

Data member Start is mandatory; its type is defined as 'typedef C_Start TStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 797 of file Count_.hpp.

References CCount_Base::C_Range::m_Start.

IsSetStart() [4/5]

bool CNtInterval_Base::IsSetStart ( void  ) const

inline

Check if a value has been assigned to Start data member.

Data member Start is mandatory; its type is defined as 'typedef CNtIntLimit TStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 198 of file NtInterval_.hpp.

References CNtInterval_Base::m_Start.

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), and CNaSeqlocHelper::x_CreateSeqloc().

IsSetStart() [5/5]

bool CNtSiteRange_Base::IsSetStart ( void  ) const

inline

Check if a value has been assigned to Start data member.

Data member Start is mandatory; its type is defined as 'typedef CNtSite TStart'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 198 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Start.

IsSetStop() [1/5]

bool CAaInterval_Base::IsSetStop ( void  ) const

inline

Check if a value has been assigned to Stop data member.

Data member Stop is mandatory; its type is defined as 'typedef CAaSite TStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 228 of file AaInterval_.hpp.

References CAaInterval_Base::m_Stop.

Referenced by CProtSeqlocHelper::CreateSeqloc().

IsSetStop() [2/5]

bool CAaSiteRange_Base::IsSetStop ( void  ) const

inline

Check if a value has been assigned to Stop data member.

Data member Stop is mandatory; its type is defined as 'typedef CAaSite TStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 228 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Stop.

IsSetStop() [3/5]

bool CCount_Base::C_Range::IsSetStop ( void  ) const

inline

Check if a value has been assigned to Stop data member.

Data member Stop is mandatory; its type is defined as 'typedef C_Stop TStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 827 of file Count_.hpp.

References CCount_Base::C_Range::m_Stop.

IsSetStop() [4/5]

bool CNtInterval_Base::IsSetStop ( void  ) const

inline

Check if a value has been assigned to Stop data member.

Data member Stop is mandatory; its type is defined as 'typedef CNtIntLimit TStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 228 of file NtInterval_.hpp.

References CNtInterval_Base::m_Stop.

Referenced by CIntronOffsetHelper::GetStopIntronOffset(), and CNaSeqlocHelper::x_CreateSeqloc().

IsSetStop() [5/5]

bool CNtSiteRange_Base::IsSetStop ( void  ) const

inline

Check if a value has been assigned to Stop data member.

Data member Stop is mandatory; its type is defined as 'typedef CNtSite TStop'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 228 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Stop.

IsSetStrand_minus()

bool CNtSite_Base::IsSetStrand_minus ( void  ) const

inline

TRUE implies opposite transcriptional orientation to to the reference sequence Check if a value has been assigned to Strand_minus data member.

Data member Strand_minus is optional with default false; its type is defined as 'typedef bool TStrand_minus'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1220 of file NtSite_.hpp.

References CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::SetStrand_minus().

IsSetSubvariants()

bool CSequenceVariant_Base::IsSetSubvariants ( void  ) const

inline

Check if a value has been assigned to Subvariants data member.

Data member Subvariants is mandatory; its type is defined as 'typedef list< CRef< CVariant > > TSubvariants'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 292 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_set_State.

IsSetType() [1/3]

bool CProteinSub_Base::IsSetType ( void  ) const

inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef int TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 252 of file ProteinSub_.hpp.

References CProteinSub_Base::m_set_State.

Referenced by CProteinSub_Base::CanGetType(), and CProteinSub_Base::SetType().

IsSetType() [2/3]

bool CSimpleVariant_Base::IsSetType ( void  ) const

inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef C_Type TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 777 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Type.

IsSetType() [3/3]

bool CSubsequence_Base::IsSetType ( void  ) const

inline

Check if a value has been assigned to Type data member.

Data member Type is mandatory; its type is defined as 'typedef int TType'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 292 of file Subsequence_.hpp.

References CSubsequence_Base::m_set_State.

Referenced by CSubsequence_Base::CanGetType(), and CSubsequence_Base::SetType().

IsSetUtr()

bool CNtSite_Base::IsSetUtr ( void  ) const

inline

Check if a value has been assigned to Utr data member.

Data member Utr is optional; its type is defined as 'typedef C_Utr TUtr'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 1199 of file NtSite_.hpp.

References CNtSite_Base::m_Utr.

Referenced by CNtSite_Base::CanGetUtr(), and CNaSeqlocHelper::x_ComputeSiteIndex().

IsSetVariants()

bool CSimpleVariantSeq_Base::IsSetVariants ( void  ) const

inline

Check if a value has been assigned to Variants data member.

Data member Variants is mandatory; its type is defined as 'typedef list< CRef< CSimpleVariant > > TVariants'

Returns

• true, if a value has been assigned.
• false, otherwise.

Definition at line 243 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State.

IsSimple()

bool CVariant_Base::IsSimple ( void  ) const

inline

Check if variant Simple is selected.

Simple type is defined as 'typedef CSimpleVariant TSimple'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 264 of file Variant_.hpp.

References CVariant_Base::e_Simple, and CVariant_Base::m_choice.

IsSite() [1/3]

bool CAaLocation_Base::IsSite ( void  ) const

inline

Check if variant Site is selected.

Site type is defined as 'typedef CAaSite TSite'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 286 of file AaLocation_.hpp.

References CAaLocation_Base::e_Site, and CAaLocation_Base::m_choice.

Referenced by CProtSeqlocHelper::CreateSeqloc(), CAaLocation::GetString(), CAaLocation::size(), CHgvsProtIrepReader::x_CreateIdentitySubvarref(), and CHgvsProtIrepReader::x_CreateVarrefFromLoc().

IsSite() [2/3]

bool CNtIntLimit_Base::IsSite ( void  ) const

inline

Check if variant Site is selected.

Site type is defined as 'typedef CNtSite TSite'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 257 of file NtIntLimit_.hpp.

References CNtIntLimit_Base::e_Site, and CNtIntLimit_Base::m_choice.

Referenced by CIntronOffsetHelper::GetStartIntronOffset(), CIntronOffsetHelper::GetStopIntronOffset(), s_SetSequenceInfo(), CNaSeqlocHelper::x_ComputeSiteIndex(), CHgvsNaIrepReader::x_CreateConversionVarref(), CNaSeqlocHelper::x_CreateSeqloc(), and CNaSeqlocHelper::x_GetStrand().

IsSite() [3/3]

bool CNtLocation_Base::IsSite ( void  ) const

inline

Check if variant Site is selected.

Site type is defined as 'typedef CNtSite TSite'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 286 of file NtLocation_.hpp.

References CNtLocation_Base::e_Site, and CNtLocation_Base::m_choice.

Referenced by AssignNtInterval(), CNaSeqlocHelper::CreateSeqloc(), CIntronOffsetHelper::GetStartIntronOffset(), s_SetSequenceInfo(), CHgvsNaIrepReader::x_CreateSubstVarref(), and CHgvsNaIrepReader::x_LooksLikePolymorphism().

IsSpecial()

bool CVariant_Base::IsSpecial ( void  ) const

inline

Check if variant Special is selected.

Special type is defined as 'typedef int TSpecial'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 270 of file Variant_.hpp.

References CVariant_Base::e_Special, and CVariant_Base::m_choice.

IsStopcodon()

bool CFrameshift_Base::IsStopcodon ( void  ) const

inline

Check if variant Stopcodon is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 248 of file Frameshift_.hpp.

References CFrameshift_Base::e_Stopcodon, and CFrameshift_Base::m_choice.

IsSubseq() [1/2]

bool CDelins_Base::C_Inserted_seq_info::IsSubseq ( void  ) const

inline

Check if variant Subseq is selected.

Subseq type is defined as 'typedef CSubsequence TSubseq'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 531 of file Delins_.hpp.

IsSubseq() [2/2]

bool CInsertion_Base::C_Seqinfo::IsSubseq ( void  ) const

inline

Check if variant Subseq is selected.

Subseq type is defined as 'typedef CSubsequence TSubseq'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 489 of file Insertion_.hpp.

IsThree_prime()

bool CNtSite_Base::C_Utr::IsThree_prime ( void  ) const

inline

Check if variant Three_prime is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 1042 of file NtSite_.hpp.

Referenced by CNaSeqlocHelper::x_ComputeSiteIndex().

IsUnknown() [1/4]

bool CCount_Base::C_Range::C_Start::IsUnknown ( void  ) const

inline

Check if variant Unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 717 of file Count_.hpp.

References CCount_Base::e_Unknown, and CCount_Base::m_choice.

IsUnknown() [2/4]

bool CCount_Base::C_Range::C_Stop::IsUnknown ( void  ) const

inline

Check if variant Unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 785 of file Count_.hpp.

References CCount_Base::e_Unknown, and CCount_Base::m_choice.

IsUnknown() [3/4]

bool CCount_Base::IsUnknown ( void  ) const

inline

Check if variant Unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 886 of file Count_.hpp.

References CCount_Base::e_Unknown, and CCount_Base::m_choice.

IsUnknown() [4/4]

bool CNtSite_Base::C_Base::IsUnknown ( void  ) const

inline

Check if variant Unknown is selected.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 909 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset(), and CNaSeqlocHelper::x_CreateSeqloc().

IsVal() [1/5]

bool CCount_Base::C_Range::C_Start::IsVal ( void  ) const

inline

Check if variant Val is selected.

Val type is defined as 'typedef TSeqPos TVal'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 690 of file Count_.hpp.

References CCount_Base::e_Val, and CCount_Base::m_choice.

IsVal() [2/5]

bool CCount_Base::C_Range::C_Stop::IsVal ( void  ) const

inline

Check if variant Val is selected.

Val type is defined as 'typedef TSeqPos TVal'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 758 of file Count_.hpp.

References CCount_Base::e_Val, and CCount_Base::m_choice.

IsVal() [3/5]

bool CCount_Base::IsVal ( void  ) const

inline

Check if variant Val is selected.

Val type is defined as 'typedef TSeqPos TVal'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 898 of file Count_.hpp.

References CCount_Base::e_Val, and CCount_Base::m_choice.

IsVal() [4/5]

bool CNtSite_Base::C_Base::IsVal ( void  ) const

inline

Check if variant Val is selected.

Val type is defined as 'typedef TSeqPos TVal'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 882 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset(), and CNaSeqlocHelper::x_ComputeSiteIndex().

IsVal() [5/5]

bool CNtSite_Base::C_Offset::IsVal ( void  ) const

inline

Check if variant Val is selected.

Val type is defined as 'typedef TSignedSeqPos TVal'.

Returns

• true, if the variant is selected.
• false, otherwise.

Definition at line 950 of file NtSite_.hpp.

Referenced by CIntronOffsetHelper::GetIntronOffset().

operator=() [1/71]

C_Base& CNtSite_Base::C_Base::operator= ( const C_Base &  )

private

operator=() [2/71]

C_Inserted_seq_info& CDelins_Base::C_Inserted_seq_info::operator= ( const C_Inserted_seq_info &  )

private

operator=() [3/71]

C_Offset& CNtSite_Base::C_Offset::operator= ( const C_Offset &  )

private

operator=() [4/71]

C_Range& CCount_Base::C_Range::operator= ( const C_Range &  )

private

operator=() [5/71]

C_Seqinfo& CInsertion_Base::C_Seqinfo::operator= ( const C_Seqinfo &  )

private

operator=() [6/71]

C_Start& CCount_Base::C_Range::C_Start::operator= ( const C_Start &  )

private

operator=() [7/71]

C_Stop& CCount_Base::C_Range::C_Stop::operator= ( const C_Stop &  )

private

operator=() [8/71]

C_Type& CSimpleVariant_Base::C_Type::operator= ( const C_Type &  )

private

operator=() [9/71]

C_Utr& CNtSite_Base::C_Utr::operator= ( const C_Utr &  )

private

operator=() [10/71]

CAaInterval_Base& CAaInterval_Base::operator= ( const CAaInterval_Base &  )

private

operator=() [11/71]

CAaLocation_Base& CAaLocation_Base::operator= ( const CAaLocation_Base &  )

private

operator=() [12/71]

CAaSite& CAaSite::operator= ( const CAaSite &  value )

private

operator=() [13/71]

CAaSite_Base& CAaSite_Base::operator= ( const CAaSite_Base &  )

private

operator=() [14/71]

CAaSiteRange& CAaSiteRange::operator= ( const CAaSiteRange &  value )

private

operator=() [15/71]

CAaSiteRange_Base& CAaSiteRange_Base::operator= ( const CAaSiteRange_Base &  )

private

operator=() [16/71]

CConversion& CConversion::operator= ( const CConversion &  value )

private

operator=() [17/71]

CConversion_Base& CConversion_Base::operator= ( const CConversion_Base &  )

private

operator=() [18/71]

CCount& CCount::operator= ( const CCount &  value )

private

operator=() [19/71]

CCount_Base& CCount_Base::operator= ( const CCount_Base &  )

private

operator=() [20/71]

CCtermExtension& CCtermExtension::operator= ( const CCtermExtension &  value )

private

operator=() [21/71]

CCtermExtension_Base& CCtermExtension_Base::operator= ( const CCtermExtension_Base &  )

private

operator=() [22/71]

CDeletion& CDeletion::operator= ( const CDeletion &  value )

private

operator=() [23/71]

CDeletion_Base& CDeletion_Base::operator= ( const CDeletion_Base &  )

private

operator=() [24/71]

CDelins& CDelins::operator= ( const CDelins &  value )

private

operator=() [25/71]

CDelins_Base& CDelins_Base::operator= ( const CDelins_Base &  )

private

operator=() [26/71]

CDuplication& CDuplication::operator= ( const CDuplication &  value )

private

operator=() [27/71]

CDuplication_Base& CDuplication_Base::operator= ( const CDuplication_Base &  )

private

operator=() [28/71]

CFrameshift& CFrameshift::operator= ( const CFrameshift &  value )

private

operator=() [29/71]

CFrameshift_Base& CFrameshift_Base::operator= ( const CFrameshift_Base &  )

private

operator=() [30/71]

CInsertion& CInsertion::operator= ( const CInsertion &  value )

private

operator=() [31/71]

CInsertion_Base& CInsertion_Base::operator= ( const CInsertion_Base &  )

private

operator=() [32/71]

CInversion& CInversion::operator= ( const CInversion &  value )

private

operator=() [33/71]

CInversion_Base& CInversion_Base::operator= ( const CInversion_Base &  )

private

operator=() [34/71]

CNaIdentity& CNaIdentity::operator= ( const CNaIdentity &  value )

private

operator=() [35/71]

CNaIdentity_Base& CNaIdentity_Base::operator= ( const CNaIdentity_Base &  )

private

operator=() [36/71]

CNaSub& CNaSub::operator= ( const CNaSub &  value )

private

operator=() [37/71]

CNaSub_Base& CNaSub_Base::operator= ( const CNaSub_Base &  )

private

operator=() [38/71]

CNtermExtension& CNtermExtension::operator= ( const CNtermExtension &  value )

private

operator=() [39/71]

CNtermExtension_Base& CNtermExtension_Base::operator= ( const CNtermExtension_Base &  )

private

operator=() [40/71]

CNtInterval& CNtInterval::operator= ( const CNtInterval &  value )

private

operator=() [41/71]

CNtInterval_Base& CNtInterval_Base::operator= ( const CNtInterval_Base &  )

private

operator=() [42/71]

CNtIntLimit& CNtIntLimit::operator= ( const CNtIntLimit &  value )

private

operator=() [43/71]

CNtIntLimit_Base& CNtIntLimit_Base::operator= ( const CNtIntLimit_Base &  )

private

operator=() [44/71]

CNtLocation& CNtLocation::operator= ( const CNtLocation &  value )

private

operator=() [45/71]

CNtLocation_Base& CNtLocation_Base::operator= ( const CNtLocation_Base &  )

private

operator=() [46/71]

CNtSite& CNtSite::operator= ( const CNtSite &  value )

private

operator=() [47/71]

CNtSite_Base& CNtSite_Base::operator= ( const CNtSite_Base &  )

private

operator=() [48/71]

CNtSiteRange& CNtSiteRange::operator= ( const CNtSiteRange &  value )

private

operator=() [49/71]

CNtSiteRange_Base& CNtSiteRange_Base::operator= ( const CNtSiteRange_Base &  )

private

operator=() [50/71]

CProteinExtension& CProteinExtension::operator= ( const CProteinExtension &  value )

private

operator=() [51/71]

CProteinExtension_Base& CProteinExtension_Base::operator= ( const CProteinExtension_Base &  )

private

operator=() [52/71]

CProteinSub& CProteinSub::operator= ( const CProteinSub &  value )

private

operator=() [53/71]

CProteinSub_Base& CProteinSub_Base::operator= ( const CProteinSub_Base &  )

private

operator=() [54/71]

CRepeat& CRepeat::operator= ( const CRepeat &  value )

private

operator=() [55/71]

CRepeat_Base& CRepeat_Base::operator= ( const CRepeat_Base &  )

private

operator=() [56/71]

CSeqInterval& CSeqInterval::operator= ( const CSeqInterval &  value )

private

operator=() [57/71]

CSeqInterval_Base& CSeqInterval_Base::operator= ( const CSeqInterval_Base &  )

private

operator=() [58/71]

CSeqLocation& CSeqLocation::operator= ( const CSeqLocation &  value )

private

operator=() [59/71]

CSeqLocation_Base& CSeqLocation_Base::operator= ( const CSeqLocation_Base &  )

private

operator=() [60/71]

CSequenceVariant& CSequenceVariant::operator= ( const CSequenceVariant &  value )

private

operator=() [61/71]

CSequenceVariant_Base& CSequenceVariant_Base::operator= ( const CSequenceVariant_Base &  )

private

operator=() [62/71]

CSimpleVariant& CSimpleVariant::operator= ( const CSimpleVariant &  value )

private

operator=() [63/71]

CSimpleVariant_Base& CSimpleVariant_Base::operator= ( const CSimpleVariant_Base &  )

private

operator=() [64/71]

CSimpleVariantSeq& CSimpleVariantSeq::operator= ( const CSimpleVariantSeq &  value )

private

operator=() [65/71]

CSimpleVariantSeq_Base& CSimpleVariantSeq_Base::operator= ( const CSimpleVariantSeq_Base &  )

private

operator=() [66/71]

CSubsequence& CSubsequence::operator= ( const CSubsequence &  value )

private

operator=() [67/71]

CSubsequence_Base& CSubsequence_Base::operator= ( const CSubsequence_Base &  )

private

operator=() [68/71]

CVariant& CVariant::operator= ( const CVariant &  value )

private

operator=() [69/71]

CVariant_Base& CVariant_Base::operator= ( const CVariant_Base &  )

private

operator=() [70/71]

CVariantExpression& CVariantExpression::operator= ( const CVariantExpression &  value )

private

operator=() [71/71]

CVariantExpression_Base& CVariantExpression_Base::operator= ( const CVariantExpression_Base &  )

private

Reset() [1/41]

void CAaInterval_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 79 of file AaInterval_.cpp.

References CAaInterval_Base::ResetStart(), and CAaInterval_Base::ResetStop().

Reset() [2/41]

void CAaLocation_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 53 of file AaLocation_.cpp.

References CAaLocation_Base::e_not_set, CAaLocation_Base::m_choice, and CAaLocation_Base::ResetSelection().

Referenced by CAaLocation_Base::~CAaLocation_Base().

Reset() [3/41]

void CAaSite_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 56 of file AaSite_.cpp.

References CAaSite_Base::ResetAa(), and CAaSite_Base::ResetIndex().

Reset() [4/41]

void CAaSiteRange_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 79 of file AaSiteRange_.cpp.

References CAaSiteRange_Base::ResetStart(), and CAaSiteRange_Base::ResetStop().

Reset() [5/41]

void CConversion_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 79 of file Conversion_.cpp.

References CConversion_Base::ResetLoc(), and CConversion_Base::ResetOrigin().

Reset() [6/41]

void CCount_Base::C_Range::C_Start::Reset

(

void

)

Reset the whole object.

Definition at line 50 of file Count_.cpp.

References CCount_Base::C_Range::C_Start::e_not_set, CCount_Base::C_Range::C_Start::m_choice, and CCount_Base::C_Range::C_Start::ResetSelection().

Reset() [7/41]

void CCount_Base::C_Range::C_Stop::Reset

(

void

)

Reset the whole object.

Definition at line 116 of file Count_.cpp.

References CCount_Base::e_not_set, CCount_Base::m_choice, and CCount_Base::ResetSelection().

Reset() [8/41]

void CCount_Base::C_Range::Reset

(

void

)

Reset the whole object.

Definition at line 210 of file Count_.cpp.

References CCount_Base::C_Range::ResetStart(), and CCount_Base::C_Range::ResetStop().

Referenced by CCount_Base::C_Range::C_Start::~C_Start(), and CCount_Base::C_Range::C_Stop::~C_Stop().

Reset() [9/41]

void CCount_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 244 of file Count_.cpp.

References CCount_Base::e_not_set, CCount_Base::m_choice, and CCount_Base::ResetSelection().

Referenced by CCount_Base::~CCount_Base().

Reset() [10/41]

void CCtermExtension_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file CtermExtension_.cpp.

References CCtermExtension_Base::ResetLength(), CCtermExtension_Base::ResetNewAa(), and CCtermExtension_Base::ResetRefStop().

Reset() [11/41]

void CDeletion_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file Deletion_.cpp.

References CDeletion_Base::ResetLoc(), and CDeletion_Base::ResetRaw_seq().

Reset() [12/41]

void CDelins_Base::C_Inserted_seq_info::Reset

(

void

)

Reset the whole object.

Definition at line 53 of file Delins_.cpp.

References CDelins_Base::C_Inserted_seq_info::e_not_set, CDelins_Base::C_Inserted_seq_info::m_choice, and CDelins_Base::C_Inserted_seq_info::ResetSelection().

Reset() [13/41]

void CDelins_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 232 of file Delins_.cpp.

References CDelins_Base::ResetDeleted_raw_seq(), CDelins_Base::ResetInserted_seq_info(), and CDelins_Base::ResetLoc().

Referenced by CDelins_Base::C_Inserted_seq_info::~C_Inserted_seq_info().

Reset() [14/41]

void CDuplication_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file Duplication_.cpp.

References CDuplication_Base::ResetLoc(), and CDuplication_Base::ResetRaw_seq().

Reset() [15/41]

void CFrameshift_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 51 of file Frameshift_.cpp.

References CFrameshift_Base::e_not_set, CFrameshift_Base::m_choice, and CFrameshift_Base::ResetSelection().

Referenced by CFrameshift_Base::~CFrameshift_Base().

Reset() [16/41]

void CInsertion_Base::C_Seqinfo::Reset

(

void

)

Reset the whole object.

Definition at line 53 of file Insertion_.cpp.

References CInsertion_Base::C_Seqinfo::e_not_set, CInsertion_Base::C_Seqinfo::m_choice, and CInsertion_Base::C_Seqinfo::ResetSelection().

Reset() [17/41]

void CInsertion_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 226 of file Insertion_.cpp.

References CInsertion_Base::ResetInt(), and CInsertion_Base::ResetSeqinfo().

Referenced by CInsertion_Base::C_Seqinfo::~C_Seqinfo().

Reset() [18/41]

void CInversion_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file Inversion_.cpp.

References CInversion_Base::ResetNtint(), CInversion_Base::ResetRaw_seq(), and CInversion_Base::ResetSize().

Reset() [19/41]

void CNaIdentity_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file NaIdentity_.cpp.

References CNaIdentity_Base::ResetLoc(), and CNaIdentity_Base::ResetNucleotide().

Reset() [20/41]

void CNaSub_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 77 of file NaSub_.cpp.

References CNaSub_Base::ResetFinal(), CNaSub_Base::ResetInitial(), and CNaSub_Base::ResetLoc().

Reset() [21/41]

void CNtermExtension_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file NtermExtension_.cpp.

References CNtermExtension_Base::ResetNewAa(), and CNtermExtension_Base::ResetNewStart().

Reset() [22/41]

void CNtInterval_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 79 of file NtInterval_.cpp.

References CNtInterval_Base::ResetStart(), and CNtInterval_Base::ResetStop().

Reset() [23/41]

void CNtIntLimit_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 52 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::e_not_set, CNtIntLimit_Base::m_choice, and CNtIntLimit_Base::ResetSelection().

Referenced by CNtIntLimit_Base::~CNtIntLimit_Base().

Reset() [24/41]

void CNtLocation_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 53 of file NtLocation_.cpp.

References CNtLocation_Base::e_not_set, CNtLocation_Base::m_choice, and CNtLocation_Base::ResetSelection().

Referenced by CNtLocation_Base::~CNtLocation_Base().

Reset() [25/41]

void CNtSite_Base::C_Base::Reset

(

void

)

Reset the whole object.

Definition at line 50 of file NtSite_.cpp.

References CNtSite_Base::C_Base::e_not_set, CNtSite_Base::C_Base::m_choice, and CNtSite_Base::C_Base::ResetSelection().

Reset() [26/41]

void CNtSite_Base::C_Offset::Reset

(

void

)

Reset the whole object.

Definition at line 116 of file NtSite_.cpp.

References e_not_set.

Reset() [27/41]

void CNtSite_Base::C_Utr::Reset

(

void

)

Reset the whole object.

Definition at line 184 of file NtSite_.cpp.

References e_not_set.

Reset() [28/41]

void CNtSite_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 297 of file NtSite_.cpp.

References CNtSite_Base::ResetBase(), CNtSite_Base::ResetFuzzy(), CNtSite_Base::ResetFuzzy_offset(), CNtSite_Base::ResetOffset(), CNtSite_Base::ResetSeqid(), CNtSite_Base::ResetSeqtype(), CNtSite_Base::ResetStrand_minus(), and CNtSite_Base::ResetUtr().

Referenced by CNtSite_Base::C_Base::~C_Base(), CNtSite_Base::C_Offset::~C_Offset(), and CNtSite_Base::C_Utr::~C_Utr().

Reset() [29/41]

void CNtSiteRange_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 79 of file NtSiteRange_.cpp.

References CNtSiteRange_Base::ResetStart(), and CNtSiteRange_Base::ResetStop().

Reset() [30/41]

void CProteinExtension_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 52 of file ProteinExtension_.cpp.

References CProteinExtension_Base::e_not_set, CProteinExtension_Base::m_choice, and CProteinExtension_Base::ResetSelection().

Referenced by CProteinExtension_Base::~CProteinExtension_Base().

Reset() [31/41]

void CProteinSub_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 81 of file ProteinSub_.cpp.

References CProteinSub_Base::ResetFinal(), CProteinSub_Base::ResetInitial(), and CProteinSub_Base::ResetType().

Reset() [32/41]

void CRepeat_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 86 of file Repeat_.cpp.

References CRepeat_Base::ResetCount(), CRepeat_Base::ResetLoc(), and CRepeat_Base::ResetRaw_seq().

Reset() [33/41]

void CSeqInterval_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 52 of file SeqInterval_.cpp.

References CSeqInterval_Base::e_not_set, CSeqInterval_Base::m_choice, and CSeqInterval_Base::ResetSelection().

Referenced by CSeqInterval_Base::~CSeqInterval_Base().

Reset() [34/41]

void CSeqLocation_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 52 of file SeqLocation_.cpp.

References CSeqLocation_Base::e_not_set, CSeqLocation_Base::m_choice, and CSeqLocation_Base::ResetSelection().

Referenced by CSeqLocation_Base::~CSeqLocation_Base().

Reset() [35/41]

void CSequenceVariant_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 66 of file SequenceVariant_.cpp.

References CSequenceVariant_Base::ResetComplex(), CSequenceVariant_Base::ResetSeqtype(), and CSequenceVariant_Base::ResetSubvariants().

Reset() [36/41]

void CSimpleVariant_Base::C_Type::Reset

(

void

)

Reset the whole object.

Definition at line 63 of file SimpleVariant_.cpp.

References CSimpleVariant_Base::C_Type::e_not_set, CSimpleVariant_Base::C_Type::m_choice, and CSimpleVariant_Base::C_Type::ResetSelection().

Reset() [37/41]

void CSimpleVariant_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 506 of file SimpleVariant_.cpp.

References CSimpleVariant_Base::ResetFuzzy(), and CSimpleVariant_Base::ResetType().

Referenced by CSimpleVariant_Base::C_Type::~C_Type().

Reset() [38/41]

void CSimpleVariantSeq_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 57 of file SimpleVariantSeq_.cpp.

References CSimpleVariantSeq_Base::ResetFuzzy(), CSimpleVariantSeq_Base::ResetSisters(), and CSimpleVariantSeq_Base::ResetVariants().

Reset() [39/41]

void CSubsequence_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 71 of file Subsequence_.cpp.

References CSubsequence_Base::ResetIdentifier(), CSubsequence_Base::ResetInt(), and CSubsequence_Base::ResetType().

Reset() [40/41]

void CVariant_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 51 of file Variant_.cpp.

References CVariant_Base::e_not_set, CVariant_Base::m_choice, and CVariant_Base::ResetSelection().

Referenced by CVariant_Base::~CVariant_Base().

Reset() [41/41]

void CVariantExpression_Base::Reset ( void  )

virtual

Reset the whole object.

Definition at line 77 of file VariantExpression_.cpp.

References CVariantExpression_Base::ResetInput_expr(), CVariantExpression_Base::ResetReference_id(), and CVariantExpression_Base::ResetSequence_variant().

ResetAa()

void CAaSite_Base::ResetAa

(

void

)

Reset Aa data member.

Definition at line 50 of file AaSite_.cpp.

References CAaSite_Base::m_Aa, and CAaSite_Base::m_set_State.

Referenced by CAaSite_Base::Reset().

ResetBase()

void CNtSite_Base::ResetBase

(

void

)

Reset Base data member.

Definition at line 249 of file NtSite_.cpp.

References CNtSite_Base::m_Base.

Referenced by CNtSite_Base::CNtSite_Base(), CNtSite_Base::GetBase(), CNtSite_Base::Reset(), and CNtSite_Base::SetBase().

ResetComplex()

void CSequenceVariant_Base::ResetComplex ( void  )

inline

Reset Complex data member.

Definition at line 329 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_Complex, and CSequenceVariant_Base::m_set_State.

Referenced by CSequenceVariant_Base::Reset().

ResetCount()

void CRepeat_Base::ResetCount

(

void

)

Reset Count data member.

Definition at line 66 of file Repeat_.cpp.

References CRepeat_Base::m_Count.

Referenced by CRepeat_Base::CRepeat_Base(), CRepeat_Base::GetCount(), CRepeat_Base::Reset(), and CRepeat_Base::SetCount().

ResetDeleted_raw_seq()

void CDelins_Base::ResetDeleted_raw_seq

(

void

)

Reset Deleted_raw_seq data member.

Definition at line 212 of file Delins_.cpp.

References CDelins_Base::m_Deleted_raw_seq, and CDelins_Base::m_set_State.

Referenced by CDelins_Base::Reset().

ResetFinal() [1/2]

void CNaSub_Base::ResetFinal

(

void

)

Reset Final data member.

Definition at line 71 of file NaSub_.cpp.

References CNaSub_Base::m_Final, and CNaSub_Base::m_set_State.

Referenced by CNaSub_Base::Reset().

ResetFinal() [2/2]

void CProteinSub_Base::ResetFinal

(

void

)

Reset Final data member.

Definition at line 75 of file ProteinSub_.cpp.

References CProteinSub_Base::m_Final, and CProteinSub_Base::m_set_State.

Referenced by CProteinSub_Base::Reset().

ResetFuzzy() [1/3]

void CNtSite_Base::ResetFuzzy ( void  )

inline

Reset Fuzzy data member.

Definition at line 1282 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy, and CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::Reset(), and CNtSite_Base::SetDefaultFuzzy().

ResetFuzzy() [2/3]

void CSimpleVariant_Base::ResetFuzzy ( void  )

inline

Reset Fuzzy data member.

Definition at line 819 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Fuzzy, and CSimpleVariant_Base::m_set_State.

Referenced by CSimpleVariant_Base::Reset(), and CSimpleVariant_Base::SetDefaultFuzzy().

ResetFuzzy() [3/3]

void CSimpleVariantSeq_Base::ResetFuzzy ( void  )

inline

Reset Fuzzy data member.

Definition at line 330 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_Fuzzy, and CSimpleVariantSeq_Base::m_set_State.

Referenced by CSimpleVariantSeq_Base::Reset(), and CSimpleVariantSeq_Base::SetDefaultFuzzy().

ResetFuzzy_offset()

void CNtSite_Base::ResetFuzzy_offset ( void  )

inline

Reset Fuzzy_offset data member.

Definition at line 1332 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy_offset, and CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::Reset(), and CNtSite_Base::SetDefaultFuzzy_offset().

ResetIdentifier()

void CSubsequence_Base::ResetIdentifier

(

void

)

Reset Identifier data member.

Definition at line 51 of file Subsequence_.cpp.

References CSubsequence_Base::m_Identifier, and CSubsequence_Base::m_set_State.

Referenced by CSubsequence_Base::Reset().

ResetIndex()

void CAaSite_Base::ResetIndex ( void  )

inline

Reset Index data member.

Definition at line 211 of file AaSite_.hpp.

References CAaSite_Base::m_Index, and CAaSite_Base::m_set_State.

Referenced by CAaSite_Base::Reset().

ResetInitial() [1/2]

void CNaSub_Base::ResetInitial

(

void

)

Reset Initial data member.

Definition at line 65 of file NaSub_.cpp.

References CNaSub_Base::m_Initial, and CNaSub_Base::m_set_State.

Referenced by CNaSub_Base::Reset().

ResetInitial() [2/2]

END_ENUM_INFO void CProteinSub_Base::ResetInitial

(

void

)

Reset Initial data member.

Definition at line 61 of file ProteinSub_.cpp.

References CProteinSub_Base::m_Initial.

Referenced by CProteinSub_Base::CProteinSub_Base(), CProteinSub_Base::GetInitial(), CProteinSub_Base::Reset(), and CProteinSub_Base::SetInitial().

ResetInput_expr()

void CVariantExpression_Base::ResetInput_expr

(

void

)

Reset Input_expr data member.

Definition at line 51 of file VariantExpression_.cpp.

References CVariantExpression_Base::m_Input_expr, and CVariantExpression_Base::m_set_State.

Referenced by CVariantExpression_Base::Reset().

ResetInserted_seq_info()

void CDelins_Base::ResetInserted_seq_info

(

void

)

Reset Inserted_seq_info data member.

Definition at line 218 of file Delins_.cpp.

References CDelins_Base::m_Inserted_seq_info.

Referenced by CDelins_Base::CDelins_Base(), CDelins_Base::GetInserted_seq_info(), CDelins_Base::Reset(), and CDelins_Base::SetInserted_seq_info().

ResetInt() [1/2]

void CInsertion_Base::ResetInt

(

void

)

Reset Int data member.

Definition at line 198 of file Insertion_.cpp.

References CInsertion_Base::m_Int.

Referenced by CInsertion_Base::CInsertion_Base(), CInsertion_Base::GetInt(), CInsertion_Base::Reset(), and CInsertion_Base::SetInt().

ResetInt() [2/2]

void CSubsequence_Base::ResetInt

(

void

)

Reset Int data member.

Definition at line 57 of file Subsequence_.cpp.

References CSubsequence_Base::m_Int.

Referenced by CSubsequence_Base::CSubsequence_Base(), CSubsequence_Base::GetInt(), CSubsequence_Base::Reset(), and CSubsequence_Base::SetInt().

ResetLength()

void CCtermExtension_Base::ResetLength

(

void

)

Reset Length data member.

Definition at line 57 of file CtermExtension_.cpp.

References CCtermExtension_Base::m_Length.

Referenced by CCtermExtension_Base::CCtermExtension_Base(), CCtermExtension_Base::GetLength(), CCtermExtension_Base::Reset(), and CCtermExtension_Base::SetLength().

ResetLoc() [1/7]

void CConversion_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 51 of file Conversion_.cpp.

References CConversion_Base::m_Loc.

Referenced by CConversion_Base::CConversion_Base(), CConversion_Base::GetLoc(), CConversion_Base::Reset(), and CConversion_Base::SetLoc().

ResetLoc() [2/7]

void CDeletion_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 51 of file Deletion_.cpp.

References CDeletion_Base::m_Loc.

Referenced by CDeletion_Base::CDeletion_Base(), CDeletion_Base::GetLoc(), CDeletion_Base::Reset(), and CDeletion_Base::SetLoc().

ResetLoc() [3/7]

void CDelins_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 198 of file Delins_.cpp.

References CDelins_Base::m_Loc.

Referenced by CDelins_Base::CDelins_Base(), CDelins_Base::GetLoc(), CDelins_Base::Reset(), and CDelins_Base::SetLoc().

ResetLoc() [4/7]

void CDuplication_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 51 of file Duplication_.cpp.

References CDuplication_Base::m_Loc.

Referenced by CDuplication_Base::CDuplication_Base(), CDuplication_Base::GetLoc(), CDuplication_Base::Reset(), and CDuplication_Base::SetLoc().

ResetLoc() [5/7]

void CNaIdentity_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 51 of file NaIdentity_.cpp.

References CNaIdentity_Base::m_Loc.

Referenced by CNaIdentity_Base::CNaIdentity_Base(), CNaIdentity_Base::GetLoc(), CNaIdentity_Base::Reset(), and CNaIdentity_Base::SetLoc().

ResetLoc() [6/7]

void CNaSub_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 51 of file NaSub_.cpp.

References CNaSub_Base::m_Loc.

Referenced by CNaSub_Base::CNaSub_Base(), CNaSub_Base::GetLoc(), CNaSub_Base::Reset(), and CNaSub_Base::SetLoc().

ResetLoc() [7/7]

void CRepeat_Base::ResetLoc

(

void

)

Reset Loc data member.

Definition at line 52 of file Repeat_.cpp.

References CRepeat_Base::m_Loc.

Referenced by CRepeat_Base::CRepeat_Base(), CRepeat_Base::GetLoc(), CRepeat_Base::Reset(), and CRepeat_Base::SetLoc().

ResetNewAa() [1/2]

void CCtermExtension_Base::ResetNewAa

(

void

)

Reset NewAa data member.

Definition at line 51 of file CtermExtension_.cpp.

References CCtermExtension_Base::m_NewAa, and CCtermExtension_Base::m_set_State.

Referenced by CCtermExtension_Base::Reset().

ResetNewAa() [2/2]

void CNtermExtension_Base::ResetNewAa

(

void

)

Reset NewAa data member.

Definition at line 65 of file NtermExtension_.cpp.

References CNtermExtension_Base::m_NewAa, and CNtermExtension_Base::m_set_State.

Referenced by CNtermExtension_Base::Reset().

ResetNewStart()

void CNtermExtension_Base::ResetNewStart

(

void

)

Reset NewStart data member.

Definition at line 51 of file NtermExtension_.cpp.

References CNtermExtension_Base::m_NewStart.

Referenced by CNtermExtension_Base::CNtermExtension_Base(), CNtermExtension_Base::GetNewStart(), CNtermExtension_Base::Reset(), and CNtermExtension_Base::SetNewStart().

ResetNtint()

void CInversion_Base::ResetNtint

(

void

)

Reset Ntint data member.

Definition at line 51 of file Inversion_.cpp.

References CInversion_Base::m_Ntint.

Referenced by CInversion_Base::CInversion_Base(), CInversion_Base::GetNtint(), CInversion_Base::Reset(), and CInversion_Base::SetNtint().

ResetNucleotide()

void CNaIdentity_Base::ResetNucleotide

(

void

)

Reset Nucleotide data member.

Definition at line 65 of file NaIdentity_.cpp.

References CNaIdentity_Base::m_Nucleotide, and CNaIdentity_Base::m_set_State.

Referenced by CNaIdentity_Base::Reset().

ResetOffset()

void CNtSite_Base::ResetOffset

(

void

)

Reset Offset data member.

Definition at line 263 of file NtSite_.cpp.

References CNtSite_Base::m_Offset.

Referenced by CNtSite_Base::Reset().

ResetOrigin()

void CConversion_Base::ResetOrigin

(

void

)

Reset Origin data member.

Definition at line 65 of file Conversion_.cpp.

References CConversion_Base::m_Origin.

Referenced by CConversion_Base::CConversion_Base(), CConversion_Base::GetOrigin(), CConversion_Base::Reset(), and CConversion_Base::SetOrigin().

ResetRaw_seq() [1/4]

void CDeletion_Base::ResetRaw_seq

(

void

)

Reset Raw_seq data member.

Definition at line 65 of file Deletion_.cpp.

References CDeletion_Base::m_Raw_seq, and CDeletion_Base::m_set_State.

Referenced by CDeletion_Base::Reset().

ResetRaw_seq() [2/4]

void CDuplication_Base::ResetRaw_seq

(

void

)

Reset Raw_seq data member.

Definition at line 65 of file Duplication_.cpp.

References CDuplication_Base::m_Raw_seq, and CDuplication_Base::m_set_State.

Referenced by CDuplication_Base::Reset().

ResetRaw_seq() [3/4]

void CInversion_Base::ResetRaw_seq

(

void

)

Reset Raw_seq data member.

Definition at line 65 of file Inversion_.cpp.

References CInversion_Base::m_Raw_seq, and CInversion_Base::m_set_State.

Referenced by CInversion_Base::Reset().

ResetRaw_seq() [4/4]

void CRepeat_Base::ResetRaw_seq

(

void

)

Reset Raw_seq data member.

Definition at line 80 of file Repeat_.cpp.

References CRepeat_Base::m_Raw_seq, and CRepeat_Base::m_set_State.

Referenced by CRepeat_Base::Reset().

ResetReference_id()

void CVariantExpression_Base::ResetReference_id

(

void

)

Reset Reference_id data member.

Definition at line 57 of file VariantExpression_.cpp.

References CVariantExpression_Base::m_Reference_id, and CVariantExpression_Base::m_set_State.

Referenced by CVariantExpression_Base::Reset().

ResetRefStop()

void CCtermExtension_Base::ResetRefStop ( void  )

inline

Reset RefStop data member.

Definition at line 255 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_RefStop, and CCtermExtension_Base::m_set_State.

Referenced by CCtermExtension_Base::Reset().

ResetSelection() [1/17]

void CAaLocation_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 59 of file AaLocation_.cpp.

References CAaLocation_Base::e_Int, CAaLocation_Base::e_not_set, CAaLocation_Base::e_Range, CAaLocation_Base::e_Site, CAaLocation_Base::m_choice, and CAaLocation_Base::m_object.

Referenced by CAaLocation_Base::Reset(), CAaLocation_Base::SetInt(), CAaLocation_Base::SetRange(), and CAaLocation_Base::SetSite().

ResetSelection() [2/17]

void CCount_Base::C_Range::C_Start::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 56 of file Count_.cpp.

References CCount_Base::e_not_set, and CCount_Base::m_choice.

Referenced by CCount_Base::C_Range::C_Start::Reset().

ResetSelection() [3/17]

void CCount_Base::C_Range::C_Stop::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 122 of file Count_.cpp.

References CCount_Base::e_not_set, and CCount_Base::m_choice.

ResetSelection() [4/17]

void CCount_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 250 of file Count_.cpp.

References CCount_Base::e_not_set, CCount_Base::e_Range, CCount_Base::m_choice, and CCount_Base::m_object.

Referenced by CCount_Base::C_Range::C_Stop::Reset(), CCount_Base::Reset(), and CCount_Base::SetRange().

ResetSelection() [5/17]

void CDelins_Base::C_Inserted_seq_info::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 59 of file Delins_.cpp.

References e_not_set.

Referenced by CDelins_Base::C_Inserted_seq_info::Reset().

ResetSelection() [6/17]

void CFrameshift_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 57 of file Frameshift_.cpp.

References CFrameshift_Base::e_Aasite, CFrameshift_Base::e_not_set, CFrameshift_Base::m_choice, and CFrameshift_Base::m_object.

Referenced by CFrameshift_Base::Reset(), and CFrameshift_Base::SetAasite().

ResetSelection() [7/17]

void CInsertion_Base::C_Seqinfo::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 59 of file Insertion_.cpp.

References e_not_set.

Referenced by CInsertion_Base::C_Seqinfo::Reset().

ResetSelection() [8/17]

void CNtIntLimit_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 58 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::e_not_set, CNtIntLimit_Base::e_Range, CNtIntLimit_Base::e_Site, CNtIntLimit_Base::m_choice, and CNtIntLimit_Base::m_object.

Referenced by CNtIntLimit_Base::Reset(), CNtIntLimit_Base::SetRange(), and CNtIntLimit_Base::SetSite().

ResetSelection() [9/17]

void CNtLocation_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 59 of file NtLocation_.cpp.

References CNtLocation_Base::e_Int, CNtLocation_Base::e_not_set, CNtLocation_Base::e_Range, CNtLocation_Base::e_Site, CNtLocation_Base::m_choice, and CNtLocation_Base::m_object.

Referenced by CNtLocation_Base::Reset(), CNtLocation_Base::SetInt(), CNtLocation_Base::SetRange(), and CNtLocation_Base::SetSite().

ResetSelection() [10/17]

void CNtSite_Base::C_Base::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 56 of file NtSite_.cpp.

References e_not_set.

Referenced by CNtSite_Base::C_Base::Reset().

ResetSelection() [11/17]

void CNtSite_Base::C_Offset::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 122 of file NtSite_.cpp.

References e_not_set.

ResetSelection() [12/17]

void CNtSite_Base::C_Utr::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 190 of file NtSite_.cpp.

References e_not_set.

ResetSelection() [13/17]

void CProteinExtension_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 58 of file ProteinExtension_.cpp.

References CProteinExtension_Base::e_Cterm_ext, CProteinExtension_Base::e_not_set, CProteinExtension_Base::e_Nterm_ext, CProteinExtension_Base::m_choice, and CProteinExtension_Base::m_object.

Referenced by CProteinExtension_Base::Reset(), CProteinExtension_Base::SetCterm_ext(), and CProteinExtension_Base::SetNterm_ext().

ResetSelection() [14/17]

void CSeqInterval_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 58 of file SeqInterval_.cpp.

References CSeqInterval_Base::e_Aaint, CSeqInterval_Base::e_not_set, CSeqInterval_Base::e_Ntint, CSeqInterval_Base::m_choice, and CSeqInterval_Base::m_object.

Referenced by CSeqInterval_Base::Reset(), CSeqInterval_Base::SetAaint(), and CSeqInterval_Base::SetNtint().

ResetSelection() [15/17]

void CSeqLocation_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 58 of file SeqLocation_.cpp.

References CSeqLocation_Base::e_Aaloc, CSeqLocation_Base::e_not_set, CSeqLocation_Base::e_Ntloc, CSeqLocation_Base::m_choice, and CSeqLocation_Base::m_object.

Referenced by CSeqLocation_Base::Reset(), CSeqLocation_Base::SetAaloc(), and CSeqLocation_Base::SetNtloc().

ResetSelection() [16/17]

void CSimpleVariant_Base::C_Type::ResetSelection

(

void

)

Reset the selection (set it to e_not_set).

Definition at line 69 of file SimpleVariant_.cpp.

References e_not_set.

Referenced by CSimpleVariant_Base::C_Type::Reset().

ResetSelection() [17/17]

void CVariant_Base::ResetSelection ( void  )

virtual

Reset the selection (set it to e_not_set).

Definition at line 57 of file Variant_.cpp.

References CVariant_Base::e_not_set, CVariant_Base::e_Simple, CVariant_Base::m_choice, and CVariant_Base::m_object.

Referenced by CVariant_Base::Reset(), and CVariant_Base::SetSimple().

ResetSeqid()

void CNtSite_Base::ResetSeqid

(

void

)

Reset Seqid data member.

Definition at line 243 of file NtSite_.cpp.

References CNtSite_Base::m_Seqid, and CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::Reset().

ResetSeqinfo()

void CInsertion_Base::ResetSeqinfo

(

void

)

Reset Seqinfo data member.

Definition at line 212 of file Insertion_.cpp.

References CInsertion_Base::m_Seqinfo.

Referenced by CInsertion_Base::CInsertion_Base(), CInsertion_Base::GetSeqinfo(), CInsertion_Base::Reset(), and CInsertion_Base::SetSeqinfo().

ResetSeqtype() [1/2]

void CNtSite_Base::ResetSeqtype ( void  )

inline

Reset Seqtype data member.

Definition at line 1113 of file NtSite_.hpp.

References int, CNtSite_Base::m_Seqtype, and CNtSite_Base::m_set_State.

Referenced by CNtSite_Base::Reset().

ResetSeqtype() [2/2]

void CSequenceVariant_Base::ResetSeqtype ( void  )

inline

Reset Seqtype data member.

Definition at line 257 of file SequenceVariant_.hpp.

References int, CSequenceVariant_Base::m_Seqtype, and CSequenceVariant_Base::m_set_State.

Referenced by CSequenceVariant_Base::Reset().

ResetSequence_variant()

void CVariantExpression_Base::ResetSequence_variant

(

void

)

Reset Sequence_variant data member.

Definition at line 63 of file VariantExpression_.cpp.

References CVariantExpression_Base::m_Sequence_variant.

Referenced by CVariantExpression_Base::CVariantExpression_Base(), CVariantExpression_Base::GetSequence_variant(), CVariantExpression_Base::Reset(), and CVariantExpression_Base::SetSequence_variant().

ResetSisters()

void CSimpleVariantSeq_Base::ResetSisters ( void  )

inline

Reset Sisters data member.

Definition at line 280 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State, and CSimpleVariantSeq_Base::m_Sisters.

Referenced by CSimpleVariantSeq_Base::Reset(), and CSimpleVariantSeq_Base::SetDefaultSisters().

ResetSize()

void CInversion_Base::ResetSize ( void  )

inline

Reset Size data member.

Definition at line 333 of file Inversion_.hpp.

References CInversion_Base::m_set_State, and CInversion_Base::m_Size.

Referenced by CInversion_Base::Reset().

ResetStart() [1/5]

void CAaInterval_Base::ResetStart

(

void

)

Reset Start data member.

Definition at line 51 of file AaInterval_.cpp.

References CAaInterval_Base::m_Start.

Referenced by CAaInterval_Base::CAaInterval_Base(), CAaInterval_Base::GetStart(), CAaInterval_Base::Reset(), and CAaInterval_Base::SetStart().

ResetStart() [2/5]

void CAaSiteRange_Base::ResetStart

(

void

)

Reset Start data member.

Definition at line 51 of file AaSiteRange_.cpp.

References CAaSiteRange_Base::m_Start.

Referenced by CAaSiteRange_Base::CAaSiteRange_Base(), CAaSiteRange_Base::GetStart(), CAaSiteRange_Base::Reset(), and CAaSiteRange_Base::SetStart().

ResetStart() [3/5]

void CCount_Base::C_Range::ResetStart

(

void

)

Reset Start data member.

Definition at line 182 of file Count_.cpp.

References CCount_Base::C_Range::m_Start.

Referenced by CCount_Base::C_Range::C_Range(), CCount_Base::C_Range::GetStart(), CCount_Base::C_Range::Reset(), and CCount_Base::C_Range::SetStart().

ResetStart() [4/5]

void CNtInterval_Base::ResetStart

(

void

)

Reset Start data member.

Definition at line 51 of file NtInterval_.cpp.

References CNtInterval_Base::m_Start.

Referenced by CNtInterval_Base::CNtInterval_Base(), CNtInterval_Base::GetStart(), CNtInterval_Base::Reset(), and CNtInterval_Base::SetStart().

ResetStart() [5/5]

void CNtSiteRange_Base::ResetStart

(

void

)

Reset Start data member.

Definition at line 51 of file NtSiteRange_.cpp.

References CNtSiteRange_Base::m_Start.

Referenced by CNtSiteRange_Base::CNtSiteRange_Base(), CNtSiteRange_Base::GetStart(), CNtSiteRange_Base::Reset(), and CNtSiteRange_Base::SetStart().

ResetStop() [1/5]

void CAaInterval_Base::ResetStop

(

void

)

Reset Stop data member.

Definition at line 65 of file AaInterval_.cpp.

References CAaInterval_Base::m_Stop.

Referenced by CAaInterval_Base::CAaInterval_Base(), CAaInterval_Base::GetStop(), CAaInterval_Base::Reset(), and CAaInterval_Base::SetStop().

ResetStop() [2/5]

void CAaSiteRange_Base::ResetStop

(

void

)

Reset Stop data member.

Definition at line 65 of file AaSiteRange_.cpp.

References CAaSiteRange_Base::m_Stop.

Referenced by CAaSiteRange_Base::CAaSiteRange_Base(), CAaSiteRange_Base::GetStop(), CAaSiteRange_Base::Reset(), and CAaSiteRange_Base::SetStop().

ResetStop() [3/5]

void CCount_Base::C_Range::ResetStop

(

void

)

Reset Stop data member.

Definition at line 196 of file Count_.cpp.

References CCount_Base::C_Range::m_Stop.

Referenced by CCount_Base::C_Range::C_Range(), CCount_Base::C_Range::GetStop(), CCount_Base::C_Range::Reset(), and CCount_Base::C_Range::SetStop().

ResetStop() [4/5]

void CNtInterval_Base::ResetStop

(

void

)

Reset Stop data member.

Definition at line 65 of file NtInterval_.cpp.

References CNtInterval_Base::m_Stop.

Referenced by CNtInterval_Base::CNtInterval_Base(), CNtInterval_Base::GetStop(), CNtInterval_Base::Reset(), and CNtInterval_Base::SetStop().

ResetStop() [5/5]

void CNtSiteRange_Base::ResetStop

(

void

)

Reset Stop data member.

Definition at line 65 of file NtSiteRange_.cpp.

References CNtSiteRange_Base::m_Stop.

Referenced by CNtSiteRange_Base::CNtSiteRange_Base(), CNtSiteRange_Base::GetStop(), CNtSiteRange_Base::Reset(), and CNtSiteRange_Base::SetStop().

ResetStrand_minus()

void CNtSite_Base::ResetStrand_minus ( void  )

inline

Reset Strand_minus data member.

Definition at line 1232 of file NtSite_.hpp.

References CNtSite_Base::m_set_State, and CNtSite_Base::m_Strand_minus.

Referenced by CNtSite_Base::Reset(), and CNtSite_Base::SetDefaultStrand_minus().

ResetSubvariants()

END_ENUM_INFO void CSequenceVariant_Base::ResetSubvariants

(

void

)

Reset Subvariants data member.

Definition at line 60 of file SequenceVariant_.cpp.

References CSequenceVariant_Base::m_set_State, and CSequenceVariant_Base::m_Subvariants.

Referenced by CSequenceVariant_Base::Reset().

ResetType() [1/3]

void CProteinSub_Base::ResetType ( void  )

inline

Reset Type data member.

Definition at line 264 of file ProteinSub_.hpp.

References CProteinSub_Base::m_set_State, and CProteinSub_Base::m_Type.

Referenced by CProteinSub_Base::Reset().

ResetType() [2/3]

void CSimpleVariant_Base::ResetType

(

void

)

Reset Type data member.

Definition at line 492 of file SimpleVariant_.cpp.

References CSimpleVariant_Base::m_Type.

Referenced by CSimpleVariant_Base::CSimpleVariant_Base(), CSimpleVariant_Base::GetType(), CSimpleVariant_Base::Reset(), and CSimpleVariant_Base::SetType().

ResetType() [3/3]

void CSubsequence_Base::ResetType ( void  )

inline

Reset Type data member.

Definition at line 304 of file Subsequence_.hpp.

References int, CSubsequence_Base::m_set_State, and CSubsequence_Base::m_Type.

Referenced by CSubsequence_Base::Reset().

ResetUtr()

void CNtSite_Base::ResetUtr

(

void

)

Reset Utr data member.

Definition at line 280 of file NtSite_.cpp.

References CNtSite_Base::m_Utr.

Referenced by CNtSite_Base::Reset().

ResetVariants()

void CSimpleVariantSeq_Base::ResetVariants

(

void

)

Reset Variants data member.

Definition at line 51 of file SimpleVariantSeq_.cpp.

References CSimpleVariantSeq_Base::m_set_State, and CSimpleVariantSeq_Base::m_Variants.

Referenced by CSimpleVariantSeq_Base::Reset().

Select() [1/34]

void CAaLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [2/34]

void CCount_Base::C_Range::C_Start::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [3/34]

void CCount_Base::C_Range::C_Stop::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [4/34]

void CCount_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [5/34]

void CDelins_Base::C_Inserted_seq_info::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [6/34]

void CFrameshift_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [7/34]

void CInsertion_Base::C_Seqinfo::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [8/34]

void CNtIntLimit_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [9/34]

void CNtLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [10/34]

void CNtSite_Base::C_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [11/34]

void CNtSite_Base::C_Offset::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [12/34]

void CNtSite_Base::C_Utr::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [13/34]

void CProteinExtension_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [14/34]

void CSeqInterval_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [15/34]

void CSeqLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [16/34]

void CSimpleVariant_Base::C_Type::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [17/34]

void CVariant_Base::Select	(	E_Choice	index,
		EResetVariant	reset,
		CObjectMemoryPool *	pool
	)

Select the requested variant if needed, allocating CObject variants from memory pool.

Select() [18/34]

void CAaLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CAaLocation_Base::SetInt(), CAaLocation_Base::SetRange(), and CAaLocation_Base::SetSite().

Select() [19/34]

void CCount_Base::C_Range::C_Start::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [20/34]

void CCount_Base::C_Range::C_Stop::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [21/34]

void CCount_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CCount_Base::SetFuzzy_val(), CCount_Base::SetRange(), CCount_Base::C_Range::C_Start::SetUnknown(), CCount_Base::C_Range::C_Stop::SetUnknown(), CCount_Base::SetUnknown(), CCount_Base::C_Range::C_Start::SetVal(), CCount_Base::C_Range::C_Stop::SetVal(), and CCount_Base::SetVal().

Select() [22/34]

void CDelins_Base::C_Inserted_seq_info::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [23/34]

void CFrameshift_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CFrameshift_Base::SetAasite(), and CFrameshift_Base::SetStopcodon().

Select() [24/34]

void CInsertion_Base::C_Seqinfo::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [25/34]

void CNtIntLimit_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CNtIntLimit_Base::SetRange(), and CNtIntLimit_Base::SetSite().

Select() [26/34]

void CNtLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CNtLocation_Base::SetInt(), CNtLocation_Base::SetRange(), and CNtLocation_Base::SetSite().

Select() [27/34]

void CNtSite_Base::C_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [28/34]

void CNtSite_Base::C_Offset::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [29/34]

void CNtSite_Base::C_Utr::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [30/34]

void CProteinExtension_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CProteinExtension_Base::SetCterm_ext(), and CProteinExtension_Base::SetNterm_ext().

Select() [31/34]

void CSeqInterval_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CSeqInterval_Base::SetAaint(), and CSeqInterval_Base::SetNtint().

Select() [32/34]

void CSeqLocation_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CSeqLocation_Base::SetAaloc(), and CSeqLocation_Base::SetNtloc().

Select() [33/34]

void CSimpleVariant_Base::C_Type::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Select() [34/34]

void CVariant_Base::Select	(	E_Choice	index,
		EResetVariant	reset = eDoResetVariant
	)

Select the requested variant if needed.

Parameters

index	New selection state.
reset	Flag that defines the resetting of the variant data. The data will be reset if either the current selection differs from the new one, or the flag is set to eDoResetVariant.

Referenced by CVariant_Base::SetSimple(), and CVariant_Base::SetSpecial().

SelectionName() [1/17]

NCBI_NS_STD::string CAaLocation_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 98 of file AaLocation_.cpp.

References CAaLocation_Base::sm_SelectionNames.

SelectionName() [2/17]

NCBI_NS_STD::string CCount_Base::C_Range::C_Start::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 79 of file Count_.cpp.

References CCount_Base::sm_SelectionNames.

SelectionName() [3/17]

NCBI_NS_STD::string CCount_Base::C_Range::C_Stop::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 145 of file Count_.cpp.

References CCount_Base::sm_SelectionNames.

SelectionName() [4/17]

NCBI_NS_STD::string CCount_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 288 of file Count_.cpp.

References CCount_Base::sm_SelectionNames.

SelectionName() [5/17]

NCBI_NS_STD::string CDelins_Base::C_Inserted_seq_info::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 103 of file Delins_.cpp.

SelectionName() [6/17]

NCBI_NS_STD::string CFrameshift_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 87 of file Frameshift_.cpp.

References CFrameshift_Base::sm_SelectionNames.

SelectionName() [7/17]

NCBI_NS_STD::string CInsertion_Base::C_Seqinfo::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 103 of file Insertion_.cpp.

SelectionName() [8/17]

NCBI_NS_STD::string CNtIntLimit_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 92 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::sm_SelectionNames.

SelectionName() [9/17]

NCBI_NS_STD::string CNtLocation_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 98 of file NtLocation_.cpp.

References CNtLocation_Base::sm_SelectionNames.

SelectionName() [10/17]

NCBI_NS_STD::string CNtSite_Base::C_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 79 of file NtSite_.cpp.

SelectionName() [11/17]

NCBI_NS_STD::string CNtSite_Base::C_Offset::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 146 of file NtSite_.cpp.

SelectionName() [12/17]

NCBI_NS_STD::string CNtSite_Base::C_Utr::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 206 of file NtSite_.cpp.

SelectionName() [13/17]

NCBI_NS_STD::string CProteinExtension_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 92 of file ProteinExtension_.cpp.

References CProteinExtension_Base::sm_SelectionNames.

SelectionName() [14/17]

NCBI_NS_STD::string CSeqInterval_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 92 of file SeqInterval_.cpp.

References CSeqInterval_Base::sm_SelectionNames.

SelectionName() [15/17]

NCBI_NS_STD::string CSeqLocation_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 92 of file SeqLocation_.cpp.

References CSeqLocation_Base::sm_SelectionNames.

SelectionName() [16/17]

NCBI_NS_STD::string CSimpleVariant_Base::C_Type::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 158 of file SimpleVariant_.cpp.

SelectionName() [17/17]

NCBI_NS_STD::string CVariant_Base::SelectionName ( E_Choice  index )

static

Retrieve selection name (for diagnostic purposes).

Parameters

index

One of possible selection states.

Returns

Name string.

Definition at line 90 of file Variant_.cpp.

References CVariant_Base::sm_SelectionNames.

SetAa() [1/3]

void CAaSite_Base::SetAa ( const TAa &  value )

inline

Assign a value to Aa data member.

Parameters

value

Value to assign

Definition at line 267 of file AaSite_.hpp.

References CAaSite_Base::m_Aa, CAaSite_Base::m_set_State, and rapidjson::value.

SetAa() [2/3]

void CAaSite_Base::SetAa ( CAaSite_Base::TAa &&  value )

inline

Definition at line 274 of file AaSite_.hpp.

References CAaSite_Base::m_Aa, CAaSite_Base::m_set_State, and rapidjson::value.

SetAa() [3/3]

CAaSite_Base::TAa & CAaSite_Base::SetAa ( void  )

inline

Assign a value to Aa data member.

Returns

Reference to the data value.

Definition at line 281 of file AaSite_.hpp.

References CAaSite_Base::IsSetAa(), CAaSite_Base::m_Aa, CAaSite_Base::m_set_State, and CSerialObject::UnassignedString().

SetAaint() [1/2]

void CSeqInterval_Base::SetAaint

(

CSeqInterval_Base::TAaint &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 114 of file SeqInterval_.cpp.

References CObject::AddReference(), CSeqInterval_Base::e_Aaint, CSeqInterval_Base::m_choice, CSeqInterval_Base::m_object, CSeqInterval_Base::ResetSelection(), and rapidjson::value.

SetAaint() [2/2]

CSeqInterval_Base::TAaint & CSeqInterval_Base::SetAaint

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 108 of file SeqInterval_.cpp.

References CSeqInterval_Base::e_Aaint, eDoNotResetVariant, CSeqInterval_Base::m_object, and CSeqInterval_Base::Select().

SetAaloc() [1/2]

void CSeqLocation_Base::SetAaloc

(

CSeqLocation_Base::TAaloc &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 114 of file SeqLocation_.cpp.

References CObject::AddReference(), CSeqLocation_Base::e_Aaloc, CSeqLocation_Base::m_choice, CSeqLocation_Base::m_object, CSeqLocation_Base::ResetSelection(), and rapidjson::value.

SetAaloc() [2/2]

CSeqLocation_Base::TAaloc & CSeqLocation_Base::SetAaloc

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 108 of file SeqLocation_.cpp.

References CSeqLocation_Base::e_Aaloc, eDoNotResetVariant, CSeqLocation_Base::m_object, and CSeqLocation_Base::Select().

SetAasite() [1/2]

void CFrameshift_Base::SetAasite

(

CFrameshift_Base::TAasite &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 109 of file Frameshift_.cpp.

References CObject::AddReference(), CFrameshift_Base::e_Aasite, CFrameshift_Base::m_choice, CFrameshift_Base::m_object, CFrameshift_Base::ResetSelection(), and rapidjson::value.

SetAasite() [2/2]

CFrameshift_Base::TAasite & CFrameshift_Base::SetAasite

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 103 of file Frameshift_.cpp.

References CFrameshift_Base::e_Aasite, eDoNotResetVariant, CFrameshift_Base::m_object, and CFrameshift_Base::Select().

SetBase() [1/2]

void CNtSite_Base::SetBase

(

CNtSite_Base::TBase &

value

)

Assign a value to Base data member.

Parameters

value

Reference to value.

Definition at line 258 of file NtSite_.cpp.

References CNtSite_Base::m_Base, and rapidjson::value.

SetBase() [2/2]

CNtSite_Base::TBase & CNtSite_Base::SetBase ( void  )

inline

Assign a value to Base data member.

Returns

Reference to the data value.

Definition at line 1169 of file NtSite_.hpp.

References CNtSite_Base::m_Base, and CNtSite_Base::ResetBase().

SetComplex() [1/2]

void CSequenceVariant_Base::SetComplex ( CSequenceVariant_Base::TComplex  value )

inline

Assign a value to Complex data member.

Parameters

value

Value to assign

Definition at line 345 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_Complex, CSequenceVariant_Base::m_set_State, and rapidjson::value.

Referenced by TagAsChimera(), and TagAsMosaic().

SetComplex() [2/2]

CSequenceVariant_Base::TComplex & CSequenceVariant_Base::SetComplex ( void  )

inline

Assign a value to Complex data member.

Returns

Reference to the data value.

Definition at line 352 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::IsSetComplex(), CSequenceVariant_Base::m_Complex, CSequenceVariant_Base::m_set_State, and CSerialObject::UnassignedByte().

SetConv() [1/2]

void CSimpleVariant_Base::C_Type::SetConv

(

TConv &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 356 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetConv() [2/2]

CSimpleVariant_Base::C_Type::TConv & CSimpleVariant_Base::C_Type::SetConv

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 350 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetCount() [1/6]

void CDelins_Base::C_Inserted_seq_info::SetCount

(

TCount &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

SetCount() [2/6]

void CInsertion_Base::C_Seqinfo::SetCount

(

TCount &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

SetCount() [3/6]

void CRepeat_Base::SetCount

(

TCount &

value

)

Assign a value to Count data member.

Parameters

value

Reference to value.

SetCount() [4/6]

CDelins_Base::C_Inserted_seq_info::TCount & CDelins_Base::C_Inserted_seq_info::SetCount

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 131 of file Delins_.cpp.

References eDoNotResetVariant.

SetCount() [5/6]

CInsertion_Base::C_Seqinfo::TCount & CInsertion_Base::C_Seqinfo::SetCount

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 131 of file Insertion_.cpp.

References eDoNotResetVariant.

SetCount() [6/6]

CRepeat_Base::TCount & CRepeat_Base::SetCount ( void  )

inline

Assign a value to Count data member.

Returns

Reference to the data value.

Definition at line 296 of file Repeat_.hpp.

References CRepeat_Base::m_Count, and CRepeat_Base::ResetCount().

SetCterm_ext() [1/2]

void CProteinExtension_Base::SetCterm_ext

(

CProteinExtension_Base::TCterm_ext &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 136 of file ProteinExtension_.cpp.

References CObject::AddReference(), CProteinExtension_Base::e_Cterm_ext, CProteinExtension_Base::m_choice, CProteinExtension_Base::m_object, CProteinExtension_Base::ResetSelection(), and rapidjson::value.

SetCterm_ext() [2/2]

CProteinExtension_Base::TCterm_ext & CProteinExtension_Base::SetCterm_ext

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 130 of file ProteinExtension_.cpp.

References CProteinExtension_Base::e_Cterm_ext, eDoNotResetVariant, CProteinExtension_Base::m_object, and CProteinExtension_Base::Select().

SetDefaultFuzzy() [1/3]

void CNtSite_Base::SetDefaultFuzzy ( void  )

inline

Assign default value to Fuzzy data member.

Definition at line 1289 of file NtSite_.hpp.

References CNtSite_Base::ResetFuzzy().

SetDefaultFuzzy() [2/3]

void CSimpleVariant_Base::SetDefaultFuzzy ( void  )

inline

Assign default value to Fuzzy data member.

Definition at line 826 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::ResetFuzzy().

SetDefaultFuzzy() [3/3]

void CSimpleVariantSeq_Base::SetDefaultFuzzy ( void  )

inline

Assign default value to Fuzzy data member.

Definition at line 337 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::ResetFuzzy().

SetDefaultFuzzy_offset()

void CNtSite_Base::SetDefaultFuzzy_offset ( void  )

inline

Assign default value to Fuzzy_offset data member.

Definition at line 1339 of file NtSite_.hpp.

References CNtSite_Base::ResetFuzzy_offset().

SetDefaultSisters()

void CSimpleVariantSeq_Base::SetDefaultSisters ( void  )

inline

Assign default value to Sisters data member.

Definition at line 287 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::ResetSisters().

SetDefaultStrand_minus()

void CNtSite_Base::SetDefaultStrand_minus ( void  )

inline

Assign default value to Strand_minus data member.

Definition at line 1239 of file NtSite_.hpp.

References CNtSite_Base::ResetStrand_minus().

SetDel() [1/2]

void CSimpleVariant_Base::C_Type::SetDel

(

TDel &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 268 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetDel() [2/2]

CSimpleVariant_Base::C_Type::TDel & CSimpleVariant_Base::C_Type::SetDel

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 262 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetDeleted_raw_seq() [1/3]

void CDelins_Base::SetDeleted_raw_seq ( const TDeleted_raw_seq &  value )

inline

Assign a value to Deleted_raw_seq data member.

Parameters

value

Value to assign

Definition at line 588 of file Delins_.hpp.

References CDelins_Base::m_Deleted_raw_seq, CDelins_Base::m_set_State, and rapidjson::value.

SetDeleted_raw_seq() [2/3]

void CDelins_Base::SetDeleted_raw_seq ( CDelins_Base::TDeleted_raw_seq &&  value )

inline

Definition at line 595 of file Delins_.hpp.

References CDelins_Base::m_Deleted_raw_seq, CDelins_Base::m_set_State, and rapidjson::value.

SetDeleted_raw_seq() [3/3]

CDelins_Base::TDeleted_raw_seq & CDelins_Base::SetDeleted_raw_seq ( void  )

inline

Assign a value to Deleted_raw_seq data member.

Returns

Reference to the data value.

Definition at line 602 of file Delins_.hpp.

References CDelins_Base::IsSetDeleted_raw_seq(), CDelins_Base::m_Deleted_raw_seq, CDelins_Base::m_set_State, and CSerialObject::UnassignedString().

SetDelins() [1/2]

void CSimpleVariant_Base::C_Type::SetDelins

(

TDelins &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 378 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetDelins() [2/2]

CSimpleVariant_Base::C_Type::TDelins & CSimpleVariant_Base::C_Type::SetDelins

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 372 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetDup() [1/2]

void CSimpleVariant_Base::C_Type::SetDup

(

TDup &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 290 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetDup() [2/2]

CSimpleVariant_Base::C_Type::TDup & CSimpleVariant_Base::C_Type::SetDup

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 284 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetFinal() [1/6]

void CNaSub_Base::SetFinal ( const TFinal &  value )

inline

Assign a value to Final data member.

Parameters

value

Value to assign

Definition at line 342 of file NaSub_.hpp.

References CNaSub_Base::m_Final, CNaSub_Base::m_set_State, and rapidjson::value.

SetFinal() [2/6]

void CProteinSub_Base::SetFinal ( const TFinal &  value )

inline

Assign a value to Final data member.

Parameters

value

Value to assign

Definition at line 350 of file ProteinSub_.hpp.

References CProteinSub_Base::m_Final, CProteinSub_Base::m_set_State, and rapidjson::value.

SetFinal() [3/6]

void CNaSub_Base::SetFinal ( CNaSub_Base::TFinal &&  value )

inline

Definition at line 349 of file NaSub_.hpp.

References CNaSub_Base::m_Final, CNaSub_Base::m_set_State, and rapidjson::value.

SetFinal() [4/6]

void CProteinSub_Base::SetFinal ( CProteinSub_Base::TFinal &&  value )

inline

Definition at line 357 of file ProteinSub_.hpp.

References CProteinSub_Base::m_Final, CProteinSub_Base::m_set_State, and rapidjson::value.

SetFinal() [5/6]

CNaSub_Base::TFinal & CNaSub_Base::SetFinal ( void  )

inline

Assign a value to Final data member.

Returns

Reference to the data value.

Definition at line 356 of file NaSub_.hpp.

References CNaSub_Base::IsSetFinal(), CNaSub_Base::m_Final, CNaSub_Base::m_set_State, and CSerialObject::UnassignedString().

SetFinal() [6/6]

CProteinSub_Base::TFinal & CProteinSub_Base::SetFinal ( void  )

inline

Assign a value to Final data member.

Returns

Reference to the data value.

Definition at line 364 of file ProteinSub_.hpp.

References CProteinSub_Base::IsSetFinal(), CProteinSub_Base::m_Final, CProteinSub_Base::m_set_State, and CSerialObject::UnassignedString().

SetFive_prime()

void CNtSite_Base::C_Utr::SetFive_prime ( void  )

inline

Select the variant.

Definition at line 1036 of file NtSite_.hpp.

References eDoNotResetVariant.

SetFrameshift() [1/2]

void CSimpleVariant_Base::C_Type::SetFrameshift

(

TFrameshift &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 444 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetFrameshift() [2/2]

CSimpleVariant_Base::C_Type::TFrameshift & CSimpleVariant_Base::C_Type::SetFrameshift

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 438 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetFuzzy() [1/6]

void CNtSite_Base::SetFuzzy ( CNtSite_Base::TFuzzy  value )

inline

Assign a value to Fuzzy data member.

Parameters

value

Value to assign

Definition at line 1301 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy, CNtSite_Base::m_set_State, and rapidjson::value.

SetFuzzy() [2/6]

void CSimpleVariant_Base::SetFuzzy ( CSimpleVariant_Base::TFuzzy  value )

inline

Assign a value to Fuzzy data member.

Parameters

value

Value to assign

Definition at line 838 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Fuzzy, CSimpleVariant_Base::m_set_State, and rapidjson::value.

SetFuzzy() [3/6]

void CSimpleVariantSeq_Base::SetFuzzy ( CSimpleVariantSeq_Base::TFuzzy  value )

inline

Assign a value to Fuzzy data member.

Parameters

value

Value to assign

Definition at line 349 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_Fuzzy, CSimpleVariantSeq_Base::m_set_State, and rapidjson::value.

SetFuzzy() [4/6]

CNtSite_Base::TFuzzy & CNtSite_Base::SetFuzzy ( void  )

inline

Assign a value to Fuzzy data member.

Returns

Reference to the data value.

Definition at line 1308 of file NtSite_.hpp.

References CNtSite_Base::IsSetFuzzy(), CNtSite_Base::m_Fuzzy, CNtSite_Base::m_set_State, and CSerialObject::UnassignedByte().

SetFuzzy() [5/6]

CSimpleVariant_Base::TFuzzy & CSimpleVariant_Base::SetFuzzy ( void  )

inline

Assign a value to Fuzzy data member.

Returns

Reference to the data value.

Definition at line 845 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::IsSetFuzzy(), CSimpleVariant_Base::m_Fuzzy, CSimpleVariant_Base::m_set_State, and CSerialObject::UnassignedByte().

SetFuzzy() [6/6]

CSimpleVariantSeq_Base::TFuzzy & CSimpleVariantSeq_Base::SetFuzzy ( void  )

inline

Assign a value to Fuzzy data member.

Returns

Reference to the data value.

Definition at line 356 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::IsSetFuzzy(), CSimpleVariantSeq_Base::m_Fuzzy, CSimpleVariantSeq_Base::m_set_State, and CSerialObject::UnassignedByte().

SetFuzzy_offset() [1/2]

void CNtSite_Base::SetFuzzy_offset ( CNtSite_Base::TFuzzy_offset  value )

inline

Assign a value to Fuzzy_offset data member.

Parameters

value

Value to assign

Definition at line 1351 of file NtSite_.hpp.

References CNtSite_Base::m_Fuzzy_offset, CNtSite_Base::m_set_State, and rapidjson::value.

SetFuzzy_offset() [2/2]

CNtSite_Base::TFuzzy_offset & CNtSite_Base::SetFuzzy_offset ( void  )

inline

Assign a value to Fuzzy_offset data member.

Returns

Reference to the data value.

Definition at line 1358 of file NtSite_.hpp.

References CNtSite_Base::IsSetFuzzy_offset(), CNtSite_Base::m_Fuzzy_offset, CNtSite_Base::m_set_State, and CSerialObject::UnassignedByte().

SetFuzzy_val() [1/2]

void CCount_Base::SetFuzzy_val ( CCount_Base::TFuzzy_val  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 945 of file Count_.hpp.

References CCount_Base::e_Fuzzy_val, eDoNotResetVariant, CCount_Base::m_Fuzzy_val, CCount_Base::Select(), and rapidjson::value.

SetFuzzy_val() [2/2]

CCount_Base::TFuzzy_val & CCount_Base::SetFuzzy_val ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 938 of file Count_.hpp.

References CCount_Base::e_Fuzzy_val, eDoNotResetVariant, CCount_Base::m_Fuzzy_val, and CCount_Base::Select().

SetIdentifier() [1/7]

void CDelins_Base::C_Inserted_seq_info::SetIdentifier

(

const TIdentifier &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 113 of file Delins_.cpp.

References eDoNotResetVariant, and rapidjson::value.

SetIdentifier() [2/7]

void CInsertion_Base::C_Seqinfo::SetIdentifier

(

const TIdentifier &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 113 of file Insertion_.cpp.

References eDoNotResetVariant, and rapidjson::value.

SetIdentifier() [3/7]

void CSubsequence_Base::SetIdentifier ( const TIdentifier &  value )

inline

Assign a value to Identifier data member.

Parameters

value

Value to assign

Definition at line 266 of file Subsequence_.hpp.

References CSubsequence_Base::m_Identifier, CSubsequence_Base::m_set_State, and rapidjson::value.

SetIdentifier() [4/7]

void CSubsequence_Base::SetIdentifier ( CSubsequence_Base::TIdentifier &&  value )

inline

Definition at line 273 of file Subsequence_.hpp.

References CSubsequence_Base::m_Identifier, CSubsequence_Base::m_set_State, and rapidjson::value.

SetIdentifier() [5/7]

CDelins_Base::C_Inserted_seq_info::TIdentifier & CDelins_Base::C_Inserted_seq_info::SetIdentifier ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 498 of file Delins_.hpp.

References eDoNotResetVariant.

SetIdentifier() [6/7]

CInsertion_Base::C_Seqinfo::TIdentifier & CInsertion_Base::C_Seqinfo::SetIdentifier ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 456 of file Insertion_.hpp.

References eDoNotResetVariant.

SetIdentifier() [7/7]

CSubsequence_Base::TIdentifier & CSubsequence_Base::SetIdentifier ( void  )

inline

Assign a value to Identifier data member.

Returns

Reference to the data value.

Definition at line 280 of file Subsequence_.hpp.

References CSubsequence_Base::IsSetIdentifier(), CSubsequence_Base::m_Identifier, CSubsequence_Base::m_set_State, and CSerialObject::UnassignedString().

SetIndex() [1/2]

void CAaSite_Base::SetIndex ( CAaSite_Base::TIndex  value )

inline

Assign a value to Index data member.

Parameters

value

Value to assign

Definition at line 227 of file AaSite_.hpp.

References CAaSite_Base::m_Index, CAaSite_Base::m_set_State, and rapidjson::value.

SetIndex() [2/2]

CAaSite_Base::TIndex & CAaSite_Base::SetIndex ( void  )

inline

Assign a value to Index data member.

Returns

Reference to the data value.

Definition at line 234 of file AaSite_.hpp.

References CAaSite_Base::IsSetIndex(), CAaSite_Base::m_Index, CAaSite_Base::m_set_State, and CSerialObject::UnassignedByte().

SetInitial() [1/5]

void CNaSub_Base::SetInitial ( const TInitial &  value )

inline

Assign a value to Initial data member.

Parameters

value

Value to assign

Definition at line 295 of file NaSub_.hpp.

References CNaSub_Base::m_Initial, CNaSub_Base::m_set_State, and rapidjson::value.

SetInitial() [2/5]

void CNaSub_Base::SetInitial ( CNaSub_Base::TInitial &&  value )

inline

Definition at line 302 of file NaSub_.hpp.

References CNaSub_Base::m_Initial, CNaSub_Base::m_set_State, and rapidjson::value.

SetInitial() [3/5]

void CProteinSub_Base::SetInitial

(

CProteinSub_Base::TInitial &

value

)

Assign a value to Initial data member.

Parameters

value

Reference to value.

Definition at line 70 of file ProteinSub_.cpp.

References CProteinSub_Base::m_Initial, and rapidjson::value.

SetInitial() [4/5]

CNaSub_Base::TInitial & CNaSub_Base::SetInitial ( void  )

inline

Assign a value to Initial data member.

Returns

Reference to the data value.

Definition at line 309 of file NaSub_.hpp.

References CNaSub_Base::IsSetInitial(), CNaSub_Base::m_Initial, CNaSub_Base::m_set_State, and CSerialObject::UnassignedString().

SetInitial() [5/5]

CProteinSub_Base::TInitial & CProteinSub_Base::SetInitial ( void  )

inline

Assign a value to Initial data member.

Returns

Reference to the data value.

Definition at line 320 of file ProteinSub_.hpp.

References CProteinSub_Base::m_Initial, and CProteinSub_Base::ResetInitial().

SetInput_expr() [1/3]

void CVariantExpression_Base::SetInput_expr ( const TInput_expr &  value )

inline

Assign a value to Input_expr data member.

Parameters

value

Value to assign

Definition at line 268 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Input_expr, CVariantExpression_Base::m_set_State, and rapidjson::value.

SetInput_expr() [2/3]

void CVariantExpression_Base::SetInput_expr ( CVariantExpression_Base::TInput_expr &&  value )

inline

Definition at line 275 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Input_expr, CVariantExpression_Base::m_set_State, and rapidjson::value.

SetInput_expr() [3/3]

CVariantExpression_Base::TInput_expr & CVariantExpression_Base::SetInput_expr ( void  )

inline

Assign a value to Input_expr data member.

Returns

Reference to the data value.

Definition at line 282 of file VariantExpression_.hpp.

References CVariantExpression_Base::IsSetInput_expr(), CVariantExpression_Base::m_Input_expr, CVariantExpression_Base::m_set_State, and CSerialObject::UnassignedString().

SetIns() [1/2]

void CSimpleVariant_Base::C_Type::SetIns

(

TIns &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 334 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetIns() [2/2]

CSimpleVariant_Base::C_Type::TIns & CSimpleVariant_Base::C_Type::SetIns

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 328 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetInserted_seq_info() [1/2]

void CDelins_Base::SetInserted_seq_info

(

CDelins_Base::TInserted_seq_info &

value

)

Assign a value to Inserted_seq_info data member.

Parameters

value

Reference to value.

Definition at line 227 of file Delins_.cpp.

References CDelins_Base::m_Inserted_seq_info, and rapidjson::value.

SetInserted_seq_info() [2/2]

CDelins_Base::TInserted_seq_info & CDelins_Base::SetInserted_seq_info ( void  )

inline

Assign a value to Inserted_seq_info data member.

Returns

Reference to the data value.

Definition at line 635 of file Delins_.hpp.

References CDelins_Base::m_Inserted_seq_info, and CDelins_Base::ResetInserted_seq_info().

SetInt() [1/8]

void CAaLocation_Base::SetInt

(

CAaLocation_Base::TInt &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 164 of file AaLocation_.cpp.

References CObject::AddReference(), CAaLocation_Base::e_Int, CAaLocation_Base::m_choice, CAaLocation_Base::m_object, CAaLocation_Base::ResetSelection(), and rapidjson::value.

SetInt() [2/8]

void CInsertion_Base::SetInt

(

CInsertion_Base::TInt &

value

)

Assign a value to Int data member.

Parameters

value

Reference to value.

Definition at line 207 of file Insertion_.cpp.

References CInsertion_Base::m_Int, and rapidjson::value.

SetInt() [3/8]

void CNtLocation_Base::SetInt

(

CNtLocation_Base::TInt &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 164 of file NtLocation_.cpp.

References CObject::AddReference(), CNtLocation_Base::e_Int, CNtLocation_Base::m_choice, CNtLocation_Base::m_object, CNtLocation_Base::ResetSelection(), and rapidjson::value.

SetInt() [4/8]

void CSubsequence_Base::SetInt

(

CSubsequence_Base::TInt &

value

)

Assign a value to Int data member.

Parameters

value

Reference to value.

Definition at line 66 of file Subsequence_.cpp.

References CSubsequence_Base::m_Int, and rapidjson::value.

SetInt() [5/8]

CAaLocation_Base::TInt & CAaLocation_Base::SetInt

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 158 of file AaLocation_.cpp.

References CAaLocation_Base::e_Int, eDoNotResetVariant, CAaLocation_Base::m_object, and CAaLocation_Base::Select().

SetInt() [6/8]

CInsertion_Base::TInt & CInsertion_Base::SetInt ( void  )

inline

Assign a value to Int data member.

Returns

Reference to the data value.

Definition at line 516 of file Insertion_.hpp.

References CInsertion_Base::m_Int, and CInsertion_Base::ResetInt().

SetInt() [7/8]

CNtLocation_Base::TInt & CNtLocation_Base::SetInt

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 158 of file NtLocation_.cpp.

References CNtLocation_Base::e_Int, eDoNotResetVariant, CNtLocation_Base::m_object, and CNtLocation_Base::Select().

Referenced by AssignNtInsertion(), AssignNtInv(), and s_SetSequenceInfo().

SetInt() [8/8]

CSubsequence_Base::TInt & CSubsequence_Base::SetInt ( void  )

inline

Assign a value to Int data member.

Returns

Reference to the data value.

Definition at line 360 of file Subsequence_.hpp.

References CSubsequence_Base::m_Int, and CSubsequence_Base::ResetInt().

SetInv() [1/2]

void CSimpleVariant_Base::C_Type::SetInv

(

TInv &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 312 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetInv() [2/2]

CSimpleVariant_Base::C_Type::TInv & CSimpleVariant_Base::C_Type::SetInv

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 306 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetLength() [1/2]

void CCtermExtension_Base::SetLength

(

CCtermExtension_Base::TLength &

value

)

Assign a value to Length data member.

Parameters

value

Reference to value.

Definition at line 66 of file CtermExtension_.cpp.

References CCtermExtension_Base::m_Length, and rapidjson::value.

SetLength() [2/2]

CCtermExtension_Base::TLength & CCtermExtension_Base::SetLength ( void  )

inline

Assign a value to Length data member.

Returns

Reference to the data value.

Definition at line 358 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_Length, and CCtermExtension_Base::ResetLength().

SetLoc() [1/14]

void CConversion_Base::SetLoc

(

CConversion_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 60 of file Conversion_.cpp.

References CConversion_Base::m_Loc, and rapidjson::value.

SetLoc() [2/14]

void CDeletion_Base::SetLoc

(

CDeletion_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 60 of file Deletion_.cpp.

References CDeletion_Base::m_Loc, and rapidjson::value.

SetLoc() [3/14]

void CDelins_Base::SetLoc

(

CDelins_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 207 of file Delins_.cpp.

References CDelins_Base::m_Loc, and rapidjson::value.

SetLoc() [4/14]

void CDuplication_Base::SetLoc

(

CDuplication_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 60 of file Duplication_.cpp.

References CDuplication_Base::m_Loc, and rapidjson::value.

SetLoc() [5/14]

void CNaIdentity_Base::SetLoc

(

CNaIdentity_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 60 of file NaIdentity_.cpp.

References CNaIdentity_Base::m_Loc, and rapidjson::value.

SetLoc() [6/14]

void CNaSub_Base::SetLoc

(

CNaSub_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 60 of file NaSub_.cpp.

References CNaSub_Base::m_Loc, and rapidjson::value.

SetLoc() [7/14]

void CRepeat_Base::SetLoc

(

CRepeat_Base::TLoc &

value

)

Assign a value to Loc data member.

Parameters

value

Reference to value.

Definition at line 61 of file Repeat_.cpp.

References CRepeat_Base::m_Loc, and rapidjson::value.

SetLoc() [8/14]

CConversion_Base::TLoc & CConversion_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 219 of file Conversion_.hpp.

References CConversion_Base::m_Loc, and CConversion_Base::ResetLoc().

SetLoc() [9/14]

CDeletion_Base::TLoc & CDeletion_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 225 of file Deletion_.hpp.

References CDeletion_Base::m_Loc, and CDeletion_Base::ResetLoc().

SetLoc() [10/14]

CDelins_Base::TLoc & CDelins_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 558 of file Delins_.hpp.

References CDelins_Base::m_Loc, and CDelins_Base::ResetLoc().

SetLoc() [11/14]

CDuplication_Base::TLoc & CDuplication_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 225 of file Duplication_.hpp.

References CDuplication_Base::m_Loc, and CDuplication_Base::ResetLoc().

SetLoc() [12/14]

CNaIdentity_Base::TLoc & CNaIdentity_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 224 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_Loc, and CNaIdentity_Base::ResetLoc().

SetLoc() [13/14]

CNaSub_Base::TLoc & CNaSub_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 265 of file NaSub_.hpp.

References CNaSub_Base::m_Loc, and CNaSub_Base::ResetLoc().

SetLoc() [14/14]

CRepeat_Base::TLoc & CRepeat_Base::SetLoc ( void  )

inline

Assign a value to Loc data member.

Returns

Reference to the data value.

Definition at line 266 of file Repeat_.hpp.

References CRepeat_Base::m_Loc, and CRepeat_Base::ResetLoc().

SetMinus_unknown()

void CNtSite_Base::C_Offset::SetMinus_unknown ( void  )

inline

Select the variant.

Definition at line 995 of file NtSite_.hpp.

References eDoNotResetVariant.

SetNa_identity() [1/2]

void CSimpleVariant_Base::C_Type::SetNa_identity

(

TNa_identity &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 180 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetNa_identity() [2/2]

CSimpleVariant_Base::C_Type::TNa_identity & CSimpleVariant_Base::C_Type::SetNa_identity

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 174 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetNa_sub() [1/2]

void CSimpleVariant_Base::C_Type::SetNa_sub

(

TNa_sub &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 202 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetNa_sub() [2/2]

CSimpleVariant_Base::C_Type::TNa_sub & CSimpleVariant_Base::C_Type::SetNa_sub

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 196 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetNewAa() [1/6]

void CCtermExtension_Base::SetNewAa ( const TNewAa &  value )

inline

Assign a value to NewAa data member.

Parameters

value

Value to assign

Definition at line 311 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_NewAa, CCtermExtension_Base::m_set_State, and rapidjson::value.

SetNewAa() [2/6]

void CNtermExtension_Base::SetNewAa ( const TNewAa &  value )

inline

Assign a value to NewAa data member.

Parameters

value

Value to assign

Definition at line 254 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_NewAa, CNtermExtension_Base::m_set_State, and rapidjson::value.

SetNewAa() [3/6]

void CCtermExtension_Base::SetNewAa ( CCtermExtension_Base::TNewAa &&  value )

inline

Definition at line 318 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_NewAa, CCtermExtension_Base::m_set_State, and rapidjson::value.

SetNewAa() [4/6]

void CNtermExtension_Base::SetNewAa ( CNtermExtension_Base::TNewAa &&  value )

inline

Definition at line 261 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_NewAa, CNtermExtension_Base::m_set_State, and rapidjson::value.

SetNewAa() [5/6]

CCtermExtension_Base::TNewAa & CCtermExtension_Base::SetNewAa ( void  )

inline

Assign a value to NewAa data member.

Returns

Reference to the data value.

Definition at line 325 of file CtermExtension_.hpp.

References CCtermExtension_Base::IsSetNewAa(), CCtermExtension_Base::m_NewAa, CCtermExtension_Base::m_set_State, and CSerialObject::UnassignedString().

SetNewAa() [6/6]

CNtermExtension_Base::TNewAa & CNtermExtension_Base::SetNewAa ( void  )

inline

Assign a value to NewAa data member.

Returns

Reference to the data value.

Definition at line 268 of file NtermExtension_.hpp.

References CNtermExtension_Base::IsSetNewAa(), CNtermExtension_Base::m_NewAa, CNtermExtension_Base::m_set_State, and CSerialObject::UnassignedString().

SetNewStart() [1/2]

void CNtermExtension_Base::SetNewStart

(

CNtermExtension_Base::TNewStart &

value

)

Assign a value to NewStart data member.

Parameters

value

Reference to value.

Definition at line 60 of file NtermExtension_.cpp.

References CNtermExtension_Base::m_NewStart, and rapidjson::value.

SetNewStart() [2/2]

CNtermExtension_Base::TNewStart & CNtermExtension_Base::SetNewStart ( void  )

inline

Assign a value to NewStart data member.

Returns

Reference to the data value.

Definition at line 224 of file NtermExtension_.hpp.

References CNtermExtension_Base::m_NewStart, and CNtermExtension_Base::ResetNewStart().

SetNterm_ext() [1/2]

void CProteinExtension_Base::SetNterm_ext

(

CProteinExtension_Base::TNterm_ext &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 114 of file ProteinExtension_.cpp.

References CObject::AddReference(), CProteinExtension_Base::e_Nterm_ext, CProteinExtension_Base::m_choice, CProteinExtension_Base::m_object, CProteinExtension_Base::ResetSelection(), and rapidjson::value.

SetNterm_ext() [2/2]

CProteinExtension_Base::TNterm_ext & CProteinExtension_Base::SetNterm_ext

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 108 of file ProteinExtension_.cpp.

References CProteinExtension_Base::e_Nterm_ext, eDoNotResetVariant, CProteinExtension_Base::m_object, and CProteinExtension_Base::Select().

SetNtint() [1/4]

void CInversion_Base::SetNtint

(

CInversion_Base::TNtint &

value

)

Assign a value to Ntint data member.

Parameters

value

Reference to value.

Definition at line 60 of file Inversion_.cpp.

References CInversion_Base::m_Ntint, and rapidjson::value.

SetNtint() [2/4]

void CSeqInterval_Base::SetNtint

(

CSeqInterval_Base::TNtint &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 136 of file SeqInterval_.cpp.

References CObject::AddReference(), CSeqInterval_Base::e_Ntint, CSeqInterval_Base::m_choice, CSeqInterval_Base::m_object, CSeqInterval_Base::ResetSelection(), and rapidjson::value.

SetNtint() [3/4]

CInversion_Base::TNtint & CInversion_Base::SetNtint ( void  )

inline

Assign a value to Ntint data member.

Returns

Reference to the data value.

Definition at line 265 of file Inversion_.hpp.

References CInversion_Base::m_Ntint, and CInversion_Base::ResetNtint().

SetNtint() [4/4]

CSeqInterval_Base::TNtint & CSeqInterval_Base::SetNtint

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 130 of file SeqInterval_.cpp.

References CSeqInterval_Base::e_Ntint, eDoNotResetVariant, CSeqInterval_Base::m_object, and CSeqInterval_Base::Select().

SetNtloc() [1/2]

void CSeqLocation_Base::SetNtloc

(

CSeqLocation_Base::TNtloc &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 136 of file SeqLocation_.cpp.

References CObject::AddReference(), CSeqLocation_Base::e_Ntloc, CSeqLocation_Base::m_choice, CSeqLocation_Base::m_object, CSeqLocation_Base::ResetSelection(), and rapidjson::value.

SetNtloc() [2/2]

CSeqLocation_Base::TNtloc & CSeqLocation_Base::SetNtloc

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 130 of file SeqLocation_.cpp.

References CSeqLocation_Base::e_Ntloc, eDoNotResetVariant, CSeqLocation_Base::m_object, and CSeqLocation_Base::Select().

SetNucleotide() [1/3]

void CNaIdentity_Base::SetNucleotide ( const TNucleotide &  value )

inline

Assign a value to Nucleotide data member.

Parameters

value

Value to assign

Definition at line 254 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_Nucleotide, CNaIdentity_Base::m_set_State, and rapidjson::value.

SetNucleotide() [2/3]

void CNaIdentity_Base::SetNucleotide ( CNaIdentity_Base::TNucleotide &&  value )

inline

Definition at line 261 of file NaIdentity_.hpp.

References CNaIdentity_Base::m_Nucleotide, CNaIdentity_Base::m_set_State, and rapidjson::value.

SetNucleotide() [3/3]

CNaIdentity_Base::TNucleotide & CNaIdentity_Base::SetNucleotide ( void  )

inline

Assign a value to Nucleotide data member.

Returns

Reference to the data value.

Definition at line 268 of file NaIdentity_.hpp.

References CNaIdentity_Base::IsSetNucleotide(), CNaIdentity_Base::m_Nucleotide, CNaIdentity_Base::m_set_State, and CSerialObject::UnassignedString().

SetOffset() [1/2]

void CNtSite_Base::SetOffset

(

CNtSite_Base::TOffset &

value

)

Assign a value to Offset data member.

Parameters

value

Reference to value.

Definition at line 268 of file NtSite_.cpp.

References CNtSite_Base::m_Offset, and rapidjson::value.

SetOffset() [2/2]

CNtSite_Base::TOffset & CNtSite_Base::SetOffset

(

void

)

Assign a value to Offset data member.

Returns

Reference to the data value.

Definition at line 273 of file NtSite_.cpp.

References CNtSite_Base::m_Offset.

SetOrigin() [1/2]

void CConversion_Base::SetOrigin

(

CConversion_Base::TOrigin &

value

)

Assign a value to Origin data member.

Parameters

value

Reference to value.

Definition at line 74 of file Conversion_.cpp.

References CConversion_Base::m_Origin, and rapidjson::value.

SetOrigin() [2/2]

CConversion_Base::TOrigin & CConversion_Base::SetOrigin ( void  )

inline

Assign a value to Origin data member.

Returns

Reference to the data value.

Definition at line 249 of file Conversion_.hpp.

References CConversion_Base::m_Origin, and CConversion_Base::ResetOrigin().

SetPlus_unknown()

void CNtSite_Base::C_Offset::SetPlus_unknown ( void  )

inline

Select the variant.

Definition at line 983 of file NtSite_.hpp.

References eDoNotResetVariant.

SetProt_ext() [1/2]

void CSimpleVariant_Base::C_Type::SetProt_ext

(

TProt_ext &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 422 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetProt_ext() [2/2]

CSimpleVariant_Base::C_Type::TProt_ext & CSimpleVariant_Base::C_Type::SetProt_ext

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 416 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetProt_silent() [1/2]

void CSimpleVariant_Base::C_Type::SetProt_silent

(

TProt_silent &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 246 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetProt_silent() [2/2]

CSimpleVariant_Base::C_Type::TProt_silent & CSimpleVariant_Base::C_Type::SetProt_silent

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 240 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetProt_sub() [1/2]

void CSimpleVariant_Base::C_Type::SetProt_sub

(

TProt_sub &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 224 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetProt_sub() [2/2]

CSimpleVariant_Base::C_Type::TProt_sub & CSimpleVariant_Base::C_Type::SetProt_sub

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 218 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetRange() [1/8]

void CAaLocation_Base::SetRange

(

CAaLocation_Base::TRange &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 142 of file AaLocation_.cpp.

References CObject::AddReference(), CAaLocation_Base::e_Range, CAaLocation_Base::m_choice, CAaLocation_Base::m_object, CAaLocation_Base::ResetSelection(), and rapidjson::value.

SetRange() [2/8]

void CCount_Base::SetRange

(

CCount_Base::TRange &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 310 of file Count_.cpp.

References CObject::AddReference(), CCount_Base::e_Range, CCount_Base::m_choice, CCount_Base::m_object, CCount_Base::ResetSelection(), and rapidjson::value.

SetRange() [3/8]

void CNtIntLimit_Base::SetRange

(

CNtIntLimit_Base::TRange &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 136 of file NtIntLimit_.cpp.

References CObject::AddReference(), CNtIntLimit_Base::e_Range, CNtIntLimit_Base::m_choice, CNtIntLimit_Base::m_object, CNtIntLimit_Base::ResetSelection(), and rapidjson::value.

SetRange() [4/8]

void CNtLocation_Base::SetRange

(

CNtLocation_Base::TRange &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 142 of file NtLocation_.cpp.

References CObject::AddReference(), CNtLocation_Base::e_Range, CNtLocation_Base::m_choice, CNtLocation_Base::m_object, CNtLocation_Base::ResetSelection(), and rapidjson::value.

SetRange() [5/8]

CAaLocation_Base::TRange & CAaLocation_Base::SetRange

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 136 of file AaLocation_.cpp.

References CAaLocation_Base::e_Range, eDoNotResetVariant, CAaLocation_Base::m_object, and CAaLocation_Base::Select().

SetRange() [6/8]

CCount_Base::TRange & CCount_Base::SetRange

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 304 of file Count_.cpp.

References CCount_Base::e_Range, eDoNotResetVariant, CCount_Base::m_object, and CCount_Base::Select().

SetRange() [7/8]

CNtIntLimit_Base::TRange & CNtIntLimit_Base::SetRange

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 130 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::e_Range, eDoNotResetVariant, CNtIntLimit_Base::m_object, and CNtIntLimit_Base::Select().

SetRange() [8/8]

CNtLocation_Base::TRange & CNtLocation_Base::SetRange

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 136 of file NtLocation_.cpp.

References CNtLocation_Base::e_Range, eDoNotResetVariant, CNtLocation_Base::m_object, and CNtLocation_Base::Select().

Referenced by AssignNtInterval(), and s_SetSequenceInfo().

SetRaw_seq() [1/16]

void CDeletion_Base::SetRaw_seq ( const TRaw_seq &  value )

inline

Assign a value to Raw_seq data member.

Parameters

value

Value to assign

Definition at line 255 of file Deletion_.hpp.

References CDeletion_Base::m_Raw_seq, CDeletion_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [2/16]

void CDelins_Base::C_Inserted_seq_info::SetRaw_seq

(

const TRaw_seq &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 119 of file Delins_.cpp.

References eDoNotResetVariant, and rapidjson::value.

SetRaw_seq() [3/16]

void CDuplication_Base::SetRaw_seq ( const TRaw_seq &  value )

inline

Assign a value to Raw_seq data member.

Parameters

value

Value to assign

Definition at line 255 of file Duplication_.hpp.

References CDuplication_Base::m_Raw_seq, CDuplication_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [4/16]

void CInsertion_Base::C_Seqinfo::SetRaw_seq

(

const TRaw_seq &

value

)

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 119 of file Insertion_.cpp.

References eDoNotResetVariant, and rapidjson::value.

SetRaw_seq() [5/16]

void CInversion_Base::SetRaw_seq ( const TRaw_seq &  value )

inline

Assign a value to Raw_seq data member.

Parameters

value

Value to assign

Definition at line 295 of file Inversion_.hpp.

References CInversion_Base::m_Raw_seq, CInversion_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [6/16]

void CRepeat_Base::SetRaw_seq ( const TRaw_seq &  value )

inline

Assign a value to Raw_seq data member.

Parameters

value

Value to assign

Definition at line 326 of file Repeat_.hpp.

References CRepeat_Base::m_Raw_seq, CRepeat_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [7/16]

void CDeletion_Base::SetRaw_seq ( CDeletion_Base::TRaw_seq &&  value )

inline

Definition at line 262 of file Deletion_.hpp.

References CDeletion_Base::m_Raw_seq, CDeletion_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [8/16]

void CDuplication_Base::SetRaw_seq ( CDuplication_Base::TRaw_seq &&  value )

inline

Definition at line 262 of file Duplication_.hpp.

References CDuplication_Base::m_Raw_seq, CDuplication_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [9/16]

void CInversion_Base::SetRaw_seq ( CInversion_Base::TRaw_seq &&  value )

inline

Definition at line 302 of file Inversion_.hpp.

References CInversion_Base::m_Raw_seq, CInversion_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [10/16]

void CRepeat_Base::SetRaw_seq ( CRepeat_Base::TRaw_seq &&  value )

inline

Definition at line 333 of file Repeat_.hpp.

References CRepeat_Base::m_Raw_seq, CRepeat_Base::m_set_State, and rapidjson::value.

SetRaw_seq() [11/16]

CDeletion_Base::TRaw_seq & CDeletion_Base::SetRaw_seq ( void  )

inline

Assign a value to Raw_seq data member.

Returns

Reference to the data value.

Definition at line 269 of file Deletion_.hpp.

References CDeletion_Base::IsSetRaw_seq(), CDeletion_Base::m_Raw_seq, CDeletion_Base::m_set_State, and CSerialObject::UnassignedString().

SetRaw_seq() [12/16]

CDelins_Base::C_Inserted_seq_info::TRaw_seq & CDelins_Base::C_Inserted_seq_info::SetRaw_seq ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 518 of file Delins_.hpp.

References eDoNotResetVariant.

SetRaw_seq() [13/16]

CDuplication_Base::TRaw_seq & CDuplication_Base::SetRaw_seq ( void  )

inline

Assign a value to Raw_seq data member.

Returns

Reference to the data value.

Definition at line 269 of file Duplication_.hpp.

References CDuplication_Base::IsSetRaw_seq(), CDuplication_Base::m_Raw_seq, CDuplication_Base::m_set_State, and CSerialObject::UnassignedString().

SetRaw_seq() [14/16]

CInsertion_Base::C_Seqinfo::TRaw_seq & CInsertion_Base::C_Seqinfo::SetRaw_seq ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 476 of file Insertion_.hpp.

References eDoNotResetVariant.

SetRaw_seq() [15/16]

CInversion_Base::TRaw_seq & CInversion_Base::SetRaw_seq ( void  )

inline

Assign a value to Raw_seq data member.

Returns

Reference to the data value.

Definition at line 309 of file Inversion_.hpp.

References CInversion_Base::IsSetRaw_seq(), CInversion_Base::m_Raw_seq, CInversion_Base::m_set_State, and CSerialObject::UnassignedString().

SetRaw_seq() [16/16]

CRepeat_Base::TRaw_seq & CRepeat_Base::SetRaw_seq ( void  )

inline

Assign a value to Raw_seq data member.

Returns

Reference to the data value.

Definition at line 340 of file Repeat_.hpp.

References CRepeat_Base::IsSetRaw_seq(), CRepeat_Base::m_Raw_seq, CRepeat_Base::m_set_State, and CSerialObject::UnassignedString().

SetReference_id() [1/3]

void CVariantExpression_Base::SetReference_id ( const TReference_id &  value )

inline

Assign a value to Reference_id data member.

Parameters

value

Value to assign

Definition at line 315 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Reference_id, CVariantExpression_Base::m_set_State, and rapidjson::value.

SetReference_id() [2/3]

void CVariantExpression_Base::SetReference_id ( CVariantExpression_Base::TReference_id &&  value )

inline

Definition at line 322 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Reference_id, CVariantExpression_Base::m_set_State, and rapidjson::value.

SetReference_id() [3/3]

CVariantExpression_Base::TReference_id & CVariantExpression_Base::SetReference_id ( void  )

inline

Assign a value to Reference_id data member.

Returns

Reference to the data value.

Definition at line 329 of file VariantExpression_.hpp.

References CVariantExpression_Base::IsSetReference_id(), CVariantExpression_Base::m_Reference_id, CVariantExpression_Base::m_set_State, and CSerialObject::UnassignedString().

SetRefStop() [1/2]

void CCtermExtension_Base::SetRefStop ( CCtermExtension_Base::TRefStop  value )

inline

Assign a value to RefStop data member.

Parameters

value

Value to assign

Definition at line 271 of file CtermExtension_.hpp.

References CCtermExtension_Base::m_RefStop, CCtermExtension_Base::m_set_State, and rapidjson::value.

SetRefStop() [2/2]

CCtermExtension_Base::TRefStop & CCtermExtension_Base::SetRefStop ( void  )

inline

Assign a value to RefStop data member.

Returns

Reference to the data value.

Definition at line 278 of file CtermExtension_.hpp.

References CCtermExtension_Base::IsSetRefStop(), CCtermExtension_Base::m_RefStop, CCtermExtension_Base::m_set_State, and CSerialObject::UnassignedByte().

SetRepeat() [1/2]

void CSimpleVariant_Base::C_Type::SetRepeat

(

TRepeat &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 400 of file SimpleVariant_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetRepeat() [2/2]

CSimpleVariant_Base::C_Type::TRepeat & CSimpleVariant_Base::C_Type::SetRepeat

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 394 of file SimpleVariant_.cpp.

References eDoNotResetVariant.

SetSeqid() [1/3]

void CNtSite_Base::SetSeqid ( const TSeqid &  value )

inline

Assign a value to Seqid data member.

Parameters

value

Value to assign

Definition at line 1075 of file NtSite_.hpp.

References CNtSite_Base::m_Seqid, CNtSite_Base::m_set_State, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetSeqid() [2/3]

void CNtSite_Base::SetSeqid ( CNtSite_Base::TSeqid &&  value )

inline

Definition at line 1082 of file NtSite_.hpp.

References CNtSite_Base::m_Seqid, CNtSite_Base::m_set_State, and rapidjson::value.

SetSeqid() [3/3]

CNtSite_Base::TSeqid & CNtSite_Base::SetSeqid ( void  )

inline

Assign a value to Seqid data member.

Returns

Reference to the data value.

Definition at line 1089 of file NtSite_.hpp.

References CNtSite_Base::IsSetSeqid(), CNtSite_Base::m_Seqid, CNtSite_Base::m_set_State, and CSerialObject::UnassignedString().

SetSeqinfo() [1/2]

void CInsertion_Base::SetSeqinfo

(

CInsertion_Base::TSeqinfo &

value

)

Assign a value to Seqinfo data member.

Parameters

value

Reference to value.

Definition at line 221 of file Insertion_.cpp.

References CInsertion_Base::m_Seqinfo, and rapidjson::value.

SetSeqinfo() [2/2]

CInsertion_Base::TSeqinfo & CInsertion_Base::SetSeqinfo ( void  )

inline

Assign a value to Seqinfo data member.

Returns

Reference to the data value.

Definition at line 546 of file Insertion_.hpp.

References CInsertion_Base::m_Seqinfo, and CInsertion_Base::ResetSeqinfo().

SetSeqtype() [1/4]

void CNtSite_Base::SetSeqtype ( CNtSite_Base::TSeqtype  value )

inline

Assign a value to Seqtype data member.

Parameters

value

Value to assign

Definition at line 1129 of file NtSite_.hpp.

References CNtSite_Base::m_Seqtype, CNtSite_Base::m_set_State, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetSeqtype() [2/4]

void CSequenceVariant_Base::SetSeqtype ( CSequenceVariant_Base::TSeqtype  value )

inline

Assign a value to Seqtype data member.

Parameters

value

Value to assign

Definition at line 273 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_Seqtype, CSequenceVariant_Base::m_set_State, and rapidjson::value.

SetSeqtype() [3/4]

CNtSite_Base::TSeqtype & CNtSite_Base::SetSeqtype ( void  )

inline

Assign a value to Seqtype data member.

Returns

Reference to the data value.

Definition at line 1136 of file NtSite_.hpp.

References CNtSite_Base::IsSetSeqtype(), CNtSite_Base::m_Seqtype, CNtSite_Base::m_set_State, and CSerialObject::UnassignedByte().

SetSeqtype() [4/4]

CSequenceVariant_Base::TSeqtype & CSequenceVariant_Base::SetSeqtype ( void  )

inline

Assign a value to Seqtype data member.

Returns

Reference to the data value.

Definition at line 280 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::IsSetSeqtype(), CSequenceVariant_Base::m_Seqtype, CSequenceVariant_Base::m_set_State, and CSerialObject::UnassignedByte().

SetSequence_variant() [1/2]

void CVariantExpression_Base::SetSequence_variant

(

CVariantExpression_Base::TSequence_variant &

value

)

Assign a value to Sequence_variant data member.

Parameters

value

Reference to value.

Definition at line 72 of file VariantExpression_.cpp.

References CVariantExpression_Base::m_Sequence_variant, and rapidjson::value.

SetSequence_variant() [2/2]

CVariantExpression_Base::TSequence_variant & CVariantExpression_Base::SetSequence_variant ( void  )

inline

Assign a value to Sequence_variant data member.

Returns

Reference to the data value.

Definition at line 362 of file VariantExpression_.hpp.

References CVariantExpression_Base::m_Sequence_variant, and CVariantExpression_Base::ResetSequence_variant().

SetSimple() [1/2]

void CVariant_Base::SetSimple

(

CVariant_Base::TSimple &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 112 of file Variant_.cpp.

References CObject::AddReference(), CVariant_Base::e_Simple, CVariant_Base::m_choice, CVariant_Base::m_object, CVariant_Base::ResetSelection(), and rapidjson::value.

SetSimple() [2/2]

CVariant_Base::TSimple & CVariant_Base::SetSimple

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 106 of file Variant_.cpp.

References CVariant_Base::e_Simple, eDoNotResetVariant, CVariant_Base::m_object, and CVariant_Base::Select().

SetSisters() [1/2]

void CSimpleVariantSeq_Base::SetSisters ( CSimpleVariantSeq_Base::TSisters  value )

inline

Assign a value to Sisters data member.

Parameters

value

Value to assign

Definition at line 299 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State, CSimpleVariantSeq_Base::m_Sisters, and rapidjson::value.

SetSisters() [2/2]

CSimpleVariantSeq_Base::TSisters & CSimpleVariantSeq_Base::SetSisters ( void  )

inline

Assign a value to Sisters data member.

Returns

Reference to the data value.

Definition at line 306 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::IsSetSisters(), CSimpleVariantSeq_Base::m_set_State, CSimpleVariantSeq_Base::m_Sisters, and CSerialObject::UnassignedByte().

SetSite() [1/6]

void CAaLocation_Base::SetSite

(

CAaLocation_Base::TSite &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 120 of file AaLocation_.cpp.

References CObject::AddReference(), CAaLocation_Base::e_Site, CAaLocation_Base::m_choice, CAaLocation_Base::m_object, CAaLocation_Base::ResetSelection(), and rapidjson::value.

SetSite() [2/6]

void CNtIntLimit_Base::SetSite

(

CNtIntLimit_Base::TSite &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 114 of file NtIntLimit_.cpp.

References CObject::AddReference(), CNtIntLimit_Base::e_Site, CNtIntLimit_Base::m_choice, CNtIntLimit_Base::m_object, CNtIntLimit_Base::ResetSelection(), and rapidjson::value.

SetSite() [3/6]

void CNtLocation_Base::SetSite

(

CNtLocation_Base::TSite &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 120 of file NtLocation_.cpp.

References CObject::AddReference(), CNtLocation_Base::e_Site, CNtLocation_Base::m_choice, CNtLocation_Base::m_object, CNtLocation_Base::ResetSelection(), and rapidjson::value.

SetSite() [4/6]

CAaLocation_Base::TSite & CAaLocation_Base::SetSite

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 114 of file AaLocation_.cpp.

References CAaLocation_Base::e_Site, eDoNotResetVariant, CAaLocation_Base::m_object, and CAaLocation_Base::Select().

SetSite() [5/6]

CNtIntLimit_Base::TSite & CNtIntLimit_Base::SetSite

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 108 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::e_Site, eDoNotResetVariant, CNtIntLimit_Base::m_object, and CNtIntLimit_Base::Select().

SetSite() [6/6]

CNtLocation_Base::TSite & CNtLocation_Base::SetSite

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 114 of file NtLocation_.cpp.

References CNtLocation_Base::e_Site, eDoNotResetVariant, CNtLocation_Base::m_object, and CNtLocation_Base::Select().

Referenced by AssignNtInterval(), and s_SetSequenceInfo().

SetSize() [1/2]

void CInversion_Base::SetSize ( CInversion_Base::TSize  value )

inline

Assign a value to Size data member.

Parameters

value

Value to assign

Definition at line 349 of file Inversion_.hpp.

References CInversion_Base::m_set_State, CInversion_Base::m_Size, and rapidjson::value.

SetSize() [2/2]

CInversion_Base::TSize & CInversion_Base::SetSize ( void  )

inline

Assign a value to Size data member.

Returns

Reference to the data value.

Definition at line 356 of file Inversion_.hpp.

References CInversion_Base::IsSetSize(), CInversion_Base::m_set_State, CInversion_Base::m_Size, and CSerialObject::UnassignedByte().

SetSpecial() [1/2]

void CVariant_Base::SetSpecial ( CVariant_Base::TSpecial  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 290 of file Variant_.hpp.

References CVariant_Base::e_Special, eDoNotResetVariant, CVariant_Base::m_Special, CVariant_Base::Select(), and rapidjson::value.

SetSpecial() [2/2]

CVariant_Base::TSpecial & CVariant_Base::SetSpecial ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 283 of file Variant_.hpp.

References CVariant_Base::e_Special, eDoNotResetVariant, CVariant_Base::m_Special, and CVariant_Base::Select().

SetStart() [1/10]

void CAaInterval_Base::SetStart

(

CAaInterval_Base::TStart &

value

)

Assign a value to Start data member.

Parameters

value

Reference to value.

Definition at line 60 of file AaInterval_.cpp.

References CAaInterval_Base::m_Start, and rapidjson::value.

SetStart() [2/10]

void CAaSiteRange_Base::SetStart

(

CAaSiteRange_Base::TStart &

value

)

Assign a value to Start data member.

Parameters

value

Reference to value.

Definition at line 60 of file AaSiteRange_.cpp.

References CAaSiteRange_Base::m_Start, and rapidjson::value.

SetStart() [3/10]

void CCount_Base::C_Range::SetStart

(

TStart &

value

)

Assign a value to Start data member.

Parameters

value

Reference to value.

Definition at line 191 of file Count_.cpp.

References CCount_Base::C_Range::m_Start, and rapidjson::value.

SetStart() [4/10]

void CNtInterval_Base::SetStart

(

CNtInterval_Base::TStart &

value

)

Assign a value to Start data member.

Parameters

value

Reference to value.

Definition at line 60 of file NtInterval_.cpp.

References CNtInterval_Base::m_Start, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetStart() [5/10]

void CNtSiteRange_Base::SetStart

(

CNtSiteRange_Base::TStart &

value

)

Assign a value to Start data member.

Parameters

value

Reference to value.

Definition at line 60 of file NtSiteRange_.cpp.

References CNtSiteRange_Base::m_Start, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetStart() [6/10]

CAaInterval_Base::TStart & CAaInterval_Base::SetStart ( void  )

inline

Assign a value to Start data member.

Returns

Reference to the data value.

Definition at line 219 of file AaInterval_.hpp.

References CAaInterval_Base::m_Start, and CAaInterval_Base::ResetStart().

SetStart() [7/10]

CAaSiteRange_Base::TStart & CAaSiteRange_Base::SetStart ( void  )

inline

Assign a value to Start data member.

Returns

Reference to the data value.

Definition at line 219 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Start, and CAaSiteRange_Base::ResetStart().

SetStart() [8/10]

CCount_Base::C_Range::TStart & CCount_Base::C_Range::SetStart ( void  )

inline

Assign a value to Start data member.

Returns

Reference to the data value.

Definition at line 818 of file Count_.hpp.

References CCount_Base::C_Range::m_Start, and CCount_Base::C_Range::ResetStart().

SetStart() [9/10]

CNtInterval_Base::TStart & CNtInterval_Base::SetStart ( void  )

inline

Assign a value to Start data member.

Returns

Reference to the data value.

Definition at line 219 of file NtInterval_.hpp.

References CNtInterval_Base::m_Start, and CNtInterval_Base::ResetStart().

SetStart() [10/10]

CNtSiteRange_Base::TStart & CNtSiteRange_Base::SetStart ( void  )

inline

Assign a value to Start data member.

Returns

Reference to the data value.

Definition at line 219 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Start, and CNtSiteRange_Base::ResetStart().

SetStop() [1/10]

void CAaInterval_Base::SetStop

(

CAaInterval_Base::TStop &

value

)

Assign a value to Stop data member.

Parameters

value

Reference to value.

Definition at line 74 of file AaInterval_.cpp.

References CAaInterval_Base::m_Stop, and rapidjson::value.

SetStop() [2/10]

void CAaSiteRange_Base::SetStop

(

CAaSiteRange_Base::TStop &

value

)

Assign a value to Stop data member.

Parameters

value

Reference to value.

Definition at line 74 of file AaSiteRange_.cpp.

References CAaSiteRange_Base::m_Stop, and rapidjson::value.

SetStop() [3/10]

void CCount_Base::C_Range::SetStop

(

TStop &

value

)

Assign a value to Stop data member.

Parameters

value

Reference to value.

Definition at line 205 of file Count_.cpp.

References CCount_Base::C_Range::m_Stop, and rapidjson::value.

SetStop() [4/10]

void CNtInterval_Base::SetStop

(

CNtInterval_Base::TStop &

value

)

Assign a value to Stop data member.

Parameters

value

Reference to value.

Definition at line 74 of file NtInterval_.cpp.

References CNtInterval_Base::m_Stop, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetStop() [5/10]

void CNtSiteRange_Base::SetStop

(

CNtSiteRange_Base::TStop &

value

)

Assign a value to Stop data member.

Parameters

value

Reference to value.

Definition at line 74 of file NtSiteRange_.cpp.

References CNtSiteRange_Base::m_Stop, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetStop() [6/10]

CAaInterval_Base::TStop & CAaInterval_Base::SetStop ( void  )

inline

Assign a value to Stop data member.

Returns

Reference to the data value.

Definition at line 249 of file AaInterval_.hpp.

References CAaInterval_Base::m_Stop, and CAaInterval_Base::ResetStop().

SetStop() [7/10]

CAaSiteRange_Base::TStop & CAaSiteRange_Base::SetStop ( void  )

inline

Assign a value to Stop data member.

Returns

Reference to the data value.

Definition at line 249 of file AaSiteRange_.hpp.

References CAaSiteRange_Base::m_Stop, and CAaSiteRange_Base::ResetStop().

SetStop() [8/10]

CCount_Base::C_Range::TStop & CCount_Base::C_Range::SetStop ( void  )

inline

Assign a value to Stop data member.

Returns

Reference to the data value.

Definition at line 848 of file Count_.hpp.

References CCount_Base::C_Range::m_Stop, and CCount_Base::C_Range::ResetStop().

SetStop() [9/10]

CNtInterval_Base::TStop & CNtInterval_Base::SetStop ( void  )

inline

Assign a value to Stop data member.

Returns

Reference to the data value.

Definition at line 249 of file NtInterval_.hpp.

References CNtInterval_Base::m_Stop, and CNtInterval_Base::ResetStop().

SetStop() [10/10]

CNtSiteRange_Base::TStop & CNtSiteRange_Base::SetStop ( void  )

inline

Assign a value to Stop data member.

Returns

Reference to the data value.

Definition at line 249 of file NtSiteRange_.hpp.

References CNtSiteRange_Base::m_Stop, and CNtSiteRange_Base::ResetStop().

SetStopcodon()

void CFrameshift_Base::SetStopcodon ( void  )

inline

Select the variant.

Definition at line 254 of file Frameshift_.hpp.

References CFrameshift_Base::e_Stopcodon, eDoNotResetVariant, and CFrameshift_Base::Select().

SetStrand_minus() [1/2]

void CNtSite_Base::SetStrand_minus ( CNtSite_Base::TStrand_minus  value )

inline

Assign a value to Strand_minus data member.

Parameters

value

Value to assign

Definition at line 1251 of file NtSite_.hpp.

References CNtSite_Base::m_set_State, CNtSite_Base::m_Strand_minus, and rapidjson::value.

Referenced by s_SetSequenceInfo().

SetStrand_minus() [2/2]

CNtSite_Base::TStrand_minus & CNtSite_Base::SetStrand_minus ( void  )

inline

Assign a value to Strand_minus data member.

Returns

Reference to the data value.

Definition at line 1258 of file NtSite_.hpp.

References CNtSite_Base::IsSetStrand_minus(), CNtSite_Base::m_set_State, CNtSite_Base::m_Strand_minus, and CSerialObject::UnassignedByte().

SetSubseq() [1/4]

void CDelins_Base::C_Inserted_seq_info::SetSubseq

(

TSubseq &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 159 of file Delins_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetSubseq() [2/4]

void CInsertion_Base::C_Seqinfo::SetSubseq

(

TSubseq &

value

)

Select the variant and set its data.

Parameters

value

Reference to the data.

Definition at line 159 of file Insertion_.cpp.

References CObject::AddReference(), and rapidjson::value.

SetSubseq() [3/4]

CDelins_Base::C_Inserted_seq_info::TSubseq & CDelins_Base::C_Inserted_seq_info::SetSubseq

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 153 of file Delins_.cpp.

References eDoNotResetVariant.

SetSubseq() [4/4]

CInsertion_Base::C_Seqinfo::TSubseq & CInsertion_Base::C_Seqinfo::SetSubseq

(

void

)

Select the variant.

Returns

Reference to the variant data.

Definition at line 153 of file Insertion_.cpp.

References eDoNotResetVariant.

SetSubvariants()

CSequenceVariant_Base::TSubvariants & CSequenceVariant_Base::SetSubvariants ( void  )

inline

Assign a value to Subvariants data member.

Returns

Reference to the data value.

Definition at line 310 of file SequenceVariant_.hpp.

References CSequenceVariant_Base::m_set_State, and CSequenceVariant_Base::m_Subvariants.

SetThree_prime()

void CNtSite_Base::C_Utr::SetThree_prime ( void  )

inline

Select the variant.

Definition at line 1048 of file NtSite_.hpp.

References eDoNotResetVariant.

SetType() [1/6]

void CSimpleVariant_Base::SetType

(

CSimpleVariant_Base::TType &

value

)

Assign a value to Type data member.

Parameters

value

Reference to value.

Definition at line 501 of file SimpleVariant_.cpp.

References CSimpleVariant_Base::m_Type, and rapidjson::value.

SetType() [2/6]

void CProteinSub_Base::SetType ( CProteinSub_Base::TType  value )

inline

Assign a value to Type data member.

Parameters

value

Value to assign

Definition at line 280 of file ProteinSub_.hpp.

References CProteinSub_Base::m_set_State, CProteinSub_Base::m_Type, and rapidjson::value.

SetType() [3/6]

void CSubsequence_Base::SetType ( CSubsequence_Base::TType  value )

inline

Assign a value to Type data member.

Parameters

value

Value to assign

Definition at line 320 of file Subsequence_.hpp.

References CSubsequence_Base::m_set_State, CSubsequence_Base::m_Type, and rapidjson::value.

SetType() [4/6]

CProteinSub_Base::TType & CProteinSub_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 287 of file ProteinSub_.hpp.

References CProteinSub_Base::IsSetType(), CProteinSub_Base::m_set_State, CProteinSub_Base::m_Type, and CSerialObject::UnassignedByte().

SetType() [5/6]

CSimpleVariant_Base::TType & CSimpleVariant_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 798 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::m_Type, and CSimpleVariant_Base::ResetType().

SetType() [6/6]

CSubsequence_Base::TType & CSubsequence_Base::SetType ( void  )

inline

Assign a value to Type data member.

Returns

Reference to the data value.

Definition at line 327 of file Subsequence_.hpp.

References CSubsequence_Base::IsSetType(), CSubsequence_Base::m_set_State, CSubsequence_Base::m_Type, and CSerialObject::UnassignedByte().

SetUnknown() [1/4]

void CCount_Base::C_Range::C_Start::SetUnknown ( void  )

inline

Select the variant.

Definition at line 723 of file Count_.hpp.

References CCount_Base::e_Unknown, eDoNotResetVariant, and CCount_Base::Select().

SetUnknown() [2/4]

void CCount_Base::C_Range::C_Stop::SetUnknown ( void  )

inline

Select the variant.

Definition at line 791 of file Count_.hpp.

References CCount_Base::e_Unknown, eDoNotResetVariant, and CCount_Base::Select().

SetUnknown() [3/4]

void CCount_Base::SetUnknown ( void  )

inline

Select the variant.

Definition at line 892 of file Count_.hpp.

References CCount_Base::e_Unknown, eDoNotResetVariant, and CCount_Base::Select().

SetUnknown() [4/4]

void CNtSite_Base::C_Base::SetUnknown ( void  )

inline

Select the variant.

Definition at line 915 of file NtSite_.hpp.

References eDoNotResetVariant.

SetUtr() [1/2]

void CNtSite_Base::SetUtr

(

CNtSite_Base::TUtr &

value

)

Assign a value to Utr data member.

Parameters

value

Reference to value.

Definition at line 285 of file NtSite_.cpp.

References CNtSite_Base::m_Utr, and rapidjson::value.

SetUtr() [2/2]

CNtSite_Base::TUtr & CNtSite_Base::SetUtr

(

void

)

Assign a value to Utr data member.

Returns

Reference to the data value.

Definition at line 290 of file NtSite_.cpp.

References CNtSite_Base::m_Utr.

SetVal() [1/10]

void CCount_Base::C_Range::C_Start::SetVal ( TVal  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 710 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, CCount_Base::Select(), and rapidjson::value.

SetVal() [2/10]

void CCount_Base::C_Range::C_Stop::SetVal ( TVal  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 778 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, CCount_Base::Select(), and rapidjson::value.

SetVal() [3/10]

void CCount_Base::SetVal ( CCount_Base::TVal  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 918 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, CCount_Base::Select(), and rapidjson::value.

SetVal() [4/10]

void CNtSite_Base::C_Base::SetVal ( TVal  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 902 of file NtSite_.hpp.

References eDoNotResetVariant, and rapidjson::value.

SetVal() [5/10]

void CNtSite_Base::C_Offset::SetVal ( TVal  value )

inline

Select the variant and set its data.

Parameters

value

Variant data.

Definition at line 970 of file NtSite_.hpp.

References eDoNotResetVariant, and rapidjson::value.

SetVal() [6/10]

CCount_Base::C_Range::C_Start::TVal & CCount_Base::C_Range::C_Start::SetVal ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 703 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, and CCount_Base::Select().

SetVal() [7/10]

CCount_Base::C_Range::C_Stop::TVal & CCount_Base::C_Range::C_Stop::SetVal ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 771 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, and CCount_Base::Select().

SetVal() [8/10]

CCount_Base::TVal & CCount_Base::SetVal ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 911 of file Count_.hpp.

References CCount_Base::e_Val, eDoNotResetVariant, CCount_Base::m_Val, and CCount_Base::Select().

SetVal() [9/10]

CNtSite_Base::C_Base::TVal & CNtSite_Base::C_Base::SetVal ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 895 of file NtSite_.hpp.

References eDoNotResetVariant.

SetVal() [10/10]

CNtSite_Base::C_Offset::TVal & CNtSite_Base::C_Offset::SetVal ( void  )

inline

Select the variant.

Returns

Reference to the variant data.

Definition at line 963 of file NtSite_.hpp.

References eDoNotResetVariant.

SetVariants()

CSimpleVariantSeq_Base::TVariants & CSimpleVariantSeq_Base::SetVariants ( void  )

inline

Assign a value to Variants data member.

Returns

Reference to the data value.

Definition at line 261 of file SimpleVariantSeq_.hpp.

References CSimpleVariantSeq_Base::m_set_State, and CSimpleVariantSeq_Base::m_Variants.

ThrowInvalidSelection() [1/17]

void CAaLocation_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 103 of file AaLocation_.cpp.

References DIAG_COMPILE_INFO, CAaLocation_Base::m_choice, and CAaLocation_Base::sm_SelectionNames.

Referenced by CAaLocation_Base::CheckSelected().

ThrowInvalidSelection() [2/17]

void CCount_Base::C_Range::C_Start::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 84 of file Count_.cpp.

References DIAG_COMPILE_INFO, CCount_Base::m_choice, and CCount_Base::sm_SelectionNames.

ThrowInvalidSelection() [3/17]

void CCount_Base::C_Range::C_Stop::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 150 of file Count_.cpp.

References DIAG_COMPILE_INFO, CCount_Base::m_choice, and CCount_Base::sm_SelectionNames.

ThrowInvalidSelection() [4/17]

void CCount_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 293 of file Count_.cpp.

References DIAG_COMPILE_INFO, CCount_Base::m_choice, and CCount_Base::sm_SelectionNames.

Referenced by CCount_Base::C_Range::C_Start::CheckSelected(), CCount_Base::C_Range::C_Stop::CheckSelected(), and CCount_Base::CheckSelected().

ThrowInvalidSelection() [5/17]

void CDelins_Base::C_Inserted_seq_info::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 108 of file Delins_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [6/17]

void CFrameshift_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 92 of file Frameshift_.cpp.

References DIAG_COMPILE_INFO, CFrameshift_Base::m_choice, and CFrameshift_Base::sm_SelectionNames.

Referenced by CFrameshift_Base::CheckSelected().

ThrowInvalidSelection() [7/17]

void CInsertion_Base::C_Seqinfo::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 108 of file Insertion_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [8/17]

void CNtIntLimit_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 97 of file NtIntLimit_.cpp.

References DIAG_COMPILE_INFO, CNtIntLimit_Base::m_choice, and CNtIntLimit_Base::sm_SelectionNames.

Referenced by CNtIntLimit_Base::CheckSelected().

ThrowInvalidSelection() [9/17]

void CNtLocation_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 103 of file NtLocation_.cpp.

References DIAG_COMPILE_INFO, CNtLocation_Base::m_choice, and CNtLocation_Base::sm_SelectionNames.

Referenced by CNtLocation_Base::CheckSelected().

ThrowInvalidSelection() [10/17]

void CNtSite_Base::C_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 84 of file NtSite_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [11/17]

void CNtSite_Base::C_Offset::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 151 of file NtSite_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [12/17]

void CNtSite_Base::C_Utr::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 211 of file NtSite_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [13/17]

void CProteinExtension_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 97 of file ProteinExtension_.cpp.

References DIAG_COMPILE_INFO, CProteinExtension_Base::m_choice, and CProteinExtension_Base::sm_SelectionNames.

Referenced by CProteinExtension_Base::CheckSelected().

ThrowInvalidSelection() [14/17]

void CSeqInterval_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 97 of file SeqInterval_.cpp.

References DIAG_COMPILE_INFO, CSeqInterval_Base::m_choice, and CSeqInterval_Base::sm_SelectionNames.

Referenced by CSeqInterval_Base::CheckSelected().

ThrowInvalidSelection() [15/17]

void CSeqLocation_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 97 of file SeqLocation_.cpp.

References DIAG_COMPILE_INFO, CSeqLocation_Base::m_choice, and CSeqLocation_Base::sm_SelectionNames.

Referenced by CSeqLocation_Base::CheckSelected().

ThrowInvalidSelection() [16/17]

void CSimpleVariant_Base::C_Type::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 163 of file SimpleVariant_.cpp.

References DIAG_COMPILE_INFO.

ThrowInvalidSelection() [17/17]

void CVariant_Base::ThrowInvalidSelection

(

E_Choice

index

)

const

Throw 'InvalidSelection' exception.

Parameters

index

Expected selection.

Definition at line 95 of file Variant_.cpp.

References DIAG_COMPILE_INFO, CVariant_Base::m_choice, and CVariant_Base::sm_SelectionNames.

Referenced by CVariant_Base::CheckSelected().

Which() [1/17]

CAaLocation_Base::E_Choice CAaLocation_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 257 of file AaLocation_.hpp.

References CAaLocation_Base::m_choice.

Which() [2/17]

CCount_Base::C_Range::C_Start::E_Choice CCount_Base::C_Range::C_Start::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 661 of file Count_.hpp.

References CCount_Base::C_Range::C_Start::m_choice.

Which() [3/17]

CCount_Base::C_Range::C_Stop::E_Choice CCount_Base::C_Range::C_Stop::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 729 of file Count_.hpp.

References CCount_Base::m_choice.

Which() [4/17]

CCount_Base::E_Choice CCount_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 857 of file Count_.hpp.

References CCount_Base::m_choice.

Which() [5/17]

CDelins_Base::C_Inserted_seq_info::E_Choice CDelins_Base::C_Inserted_seq_info::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 456 of file Delins_.hpp.

References CDelins_Base::C_Inserted_seq_info::m_choice.

Which() [6/17]

CFrameshift_Base::E_Choice CFrameshift_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 213 of file Frameshift_.hpp.

References CFrameshift_Base::m_choice.

Which() [7/17]

CInsertion_Base::C_Seqinfo::E_Choice CInsertion_Base::C_Seqinfo::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 414 of file Insertion_.hpp.

References CInsertion_Base::C_Seqinfo::m_choice.

Which() [8/17]

CNtIntLimit_Base::E_Choice CNtIntLimit_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 228 of file NtIntLimit_.hpp.

References CNtIntLimit_Base::m_choice.

Which() [9/17]

CNtLocation_Base::E_Choice CNtLocation_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 257 of file NtLocation_.hpp.

References CNtLocation_Base::m_choice.

Which() [10/17]

CNtSite_Base::C_Base::E_Choice CNtSite_Base::C_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 853 of file NtSite_.hpp.

References CNtSite_Base::C_Base::m_choice.

Which() [11/17]

CNtSite_Base::C_Offset::E_Choice CNtSite_Base::C_Offset::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 921 of file NtSite_.hpp.

Which() [12/17]

CNtSite_Base::C_Utr::E_Choice CNtSite_Base::C_Utr::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 1001 of file NtSite_.hpp.

Which() [13/17]

CProteinExtension_Base::E_Choice CProteinExtension_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 228 of file ProteinExtension_.hpp.

References CProteinExtension_Base::m_choice.

Which() [14/17]

CSeqInterval_Base::E_Choice CSeqInterval_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 228 of file SeqInterval_.hpp.

References CSeqInterval_Base::m_choice.

Which() [15/17]

CSeqLocation_Base::E_Choice CSeqLocation_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 228 of file SeqLocation_.hpp.

References CSeqLocation_Base::m_choice.

Which() [16/17]

CSimpleVariant_Base::C_Type::E_Choice CSimpleVariant_Base::C_Type::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 670 of file SimpleVariant_.hpp.

References CSimpleVariant_Base::C_Type::m_choice.

Which() [17/17]

CVariant_Base::E_Choice CVariant_Base::Which ( void  ) const

inline

Which variant is currently selected.

Returns

Choice state enumerator.

Definition at line 235 of file Variant_.hpp.

References CVariant_Base::m_choice.

~C_Base()

CNtSite_Base::C_Base::~C_Base

(

void

)

Definition at line 110 of file NtSite_.cpp.

References CNtSite_Base::Reset().

~C_Inserted_seq_info()

CDelins_Base::C_Inserted_seq_info::~C_Inserted_seq_info

(

void

)

Definition at line 192 of file Delins_.cpp.

References CDelins_Base::Reset().

~C_Offset()

CNtSite_Base::C_Offset::~C_Offset

(

void

)

Definition at line 178 of file NtSite_.cpp.

References CNtSite_Base::Reset().

~C_Range()

CCount_Base::C_Range::~C_Range

(

void

)

Definition at line 239 of file Count_.cpp.

~C_Seqinfo()

CInsertion_Base::C_Seqinfo::~C_Seqinfo

(

void

)

Definition at line 192 of file Insertion_.cpp.

References CInsertion_Base::Reset().

~C_Start()

CCount_Base::C_Range::C_Start::~C_Start

(

void

)

Definition at line 110 of file Count_.cpp.

References CCount_Base::C_Range::Reset().

~C_Stop()

CCount_Base::C_Range::C_Stop::~C_Stop

(

void

)

Definition at line 176 of file Count_.cpp.

References CCount_Base::C_Range::Reset().

~C_Type()

CSimpleVariant_Base::C_Type::~C_Type

(

void

)

Definition at line 486 of file SimpleVariant_.cpp.

References CSimpleVariant_Base::Reset().

~C_Utr()

CNtSite_Base::C_Utr::~C_Utr

(

void

)

Definition at line 237 of file NtSite_.cpp.

References CNtSite_Base::Reset().

~CAaInterval_Base()

CAaInterval_Base::~CAaInterval_Base ( void  )

virtual

Definition at line 107 of file AaInterval_.cpp.

~CAaLocation_Base()

CAaLocation_Base::~CAaLocation_Base ( void  )

virtual

Definition at line 195 of file AaLocation_.cpp.

References CAaLocation_Base::Reset().

~CAaSite()

CAaSite::~CAaSite

(

void

)

Definition at line 50 of file AaSite.cpp.

~CAaSite_Base()

CAaSite_Base::~CAaSite_Base ( void  )

virtual

Definition at line 81 of file AaSite_.cpp.

~CAaSiteRange()

CAaSiteRange::~CAaSiteRange

(

void

)

Definition at line 50 of file AaSiteRange.cpp.

~CAaSiteRange_Base()

CAaSiteRange_Base::~CAaSiteRange_Base ( void  )

virtual

Definition at line 107 of file AaSiteRange_.cpp.

~CConversion()

CConversion::~CConversion

(

void

)

Definition at line 50 of file Conversion.cpp.

~CConversion_Base()

CConversion_Base::~CConversion_Base ( void  )

virtual

Definition at line 107 of file Conversion_.cpp.

~CCount()

CCount::~CCount

(

void

)

Definition at line 50 of file Count.cpp.

~CCount_Base()

CCount_Base::~CCount_Base ( void  )

virtual

Definition at line 342 of file Count_.cpp.

References CCount_Base::Reset().

~CCtermExtension()

CCtermExtension::~CCtermExtension

(

void

)

Definition at line 50 of file CtermExtension.cpp.

~CCtermExtension_Base()

CCtermExtension_Base::~CCtermExtension_Base ( void  )

virtual

Definition at line 101 of file CtermExtension_.cpp.

~CDeletion()

CDeletion::~CDeletion

(

void

)

Definition at line 50 of file Deletion.cpp.

~CDeletion_Base()

CDeletion_Base::~CDeletion_Base ( void  )

virtual

Definition at line 98 of file Deletion_.cpp.

~CDelins()

CDelins::~CDelins

(

void

)

Definition at line 50 of file Delins.cpp.

~CDelins_Base()

CDelins_Base::~CDelins_Base ( void  )

virtual

Definition at line 262 of file Delins_.cpp.

~CDuplication()

CDuplication::~CDuplication

(

void

)

Definition at line 50 of file Duplication.cpp.

~CDuplication_Base()

CDuplication_Base::~CDuplication_Base ( void  )

virtual

Definition at line 98 of file Duplication_.cpp.

~CFrameshift()

CFrameshift::~CFrameshift

(

void

)

Definition at line 50 of file Frameshift.cpp.

~CFrameshift_Base()

CFrameshift_Base::~CFrameshift_Base ( void  )

virtual

Definition at line 139 of file Frameshift_.cpp.

References CFrameshift_Base::Reset().

~CInsertion()

CInsertion::~CInsertion

(

void

)

Definition at line 50 of file Insertion.cpp.

~CInsertion_Base()

CInsertion_Base::~CInsertion_Base ( void  )

virtual

Definition at line 254 of file Insertion_.cpp.

~CInversion()

CInversion::~CInversion

(

void

)

Definition at line 50 of file Inversion.cpp.

~CInversion_Base()

CInversion_Base::~CInversion_Base ( void  )

virtual

Definition at line 101 of file Inversion_.cpp.

~CNaIdentity()

CNaIdentity::~CNaIdentity

(

void

)

Definition at line 50 of file NaIdentity.cpp.

~CNaIdentity_Base()

CNaIdentity_Base::~CNaIdentity_Base ( void  )

virtual

Definition at line 98 of file NaIdentity_.cpp.

~CNaSub()

CNaSub::~CNaSub

(

void

)

Definition at line 50 of file NaSub.cpp.

~CNaSub_Base()

CNaSub_Base::~CNaSub_Base ( void  )

virtual

Definition at line 106 of file NaSub_.cpp.

~CNtermExtension()

CNtermExtension::~CNtermExtension

(

void

)

Definition at line 50 of file NtermExtension.cpp.

~CNtermExtension_Base()

CNtermExtension_Base::~CNtermExtension_Base ( void  )

virtual

Definition at line 98 of file NtermExtension_.cpp.

~CNtInterval()

CNtInterval::~CNtInterval

(

void

)

Definition at line 50 of file NtInterval.cpp.

~CNtInterval_Base()

CNtInterval_Base::~CNtInterval_Base ( void  )

virtual

Definition at line 107 of file NtInterval_.cpp.

~CNtIntLimit()

CNtIntLimit::~CNtIntLimit

(

void

)

Definition at line 50 of file NtIntLimit.cpp.

~CNtIntLimit_Base()

CNtIntLimit_Base::~CNtIntLimit_Base ( void  )

virtual

Definition at line 166 of file NtIntLimit_.cpp.

References CNtIntLimit_Base::Reset().

~CNtLocation()

CNtLocation::~CNtLocation

(

void

)

Definition at line 50 of file NtLocation.cpp.

~CNtLocation_Base()

CNtLocation_Base::~CNtLocation_Base ( void  )

virtual

Definition at line 195 of file NtLocation_.cpp.

References CNtLocation_Base::Reset().

~CNtSite()

CNtSite::~CNtSite

(

void

)

Definition at line 50 of file NtSite.cpp.

~CNtSite_Base()

CNtSite_Base::~CNtSite_Base ( void  )

virtual

Definition at line 337 of file NtSite_.cpp.

~CNtSiteRange()

CNtSiteRange::~CNtSiteRange

(

void

)

Definition at line 50 of file NtSiteRange.cpp.

~CNtSiteRange_Base()

CNtSiteRange_Base::~CNtSiteRange_Base ( void  )

virtual

Definition at line 107 of file NtSiteRange_.cpp.

~CProteinExtension()

CProteinExtension::~CProteinExtension

(

void

)

Definition at line 50 of file ProteinExtension.cpp.

~CProteinExtension_Base()

CProteinExtension_Base::~CProteinExtension_Base ( void  )

virtual

Definition at line 166 of file ProteinExtension_.cpp.

References CProteinExtension_Base::Reset().

~CProteinSub()

CProteinSub::~CProteinSub

(

void

)

Definition at line 50 of file ProteinSub.cpp.

~CProteinSub_Base()

CProteinSub_Base::~CProteinSub_Base ( void  )

virtual

Definition at line 111 of file ProteinSub_.cpp.

~CRepeat()

CRepeat::~CRepeat

(

void

)

Definition at line 50 of file Repeat.cpp.

~CRepeat_Base()

CRepeat_Base::~CRepeat_Base ( void  )

virtual

Definition at line 116 of file Repeat_.cpp.

~CSeqInterval()

CSeqInterval::~CSeqInterval

(

void

)

Definition at line 50 of file SeqInterval.cpp.

~CSeqInterval_Base()

CSeqInterval_Base::~CSeqInterval_Base ( void  )

virtual

Definition at line 166 of file SeqInterval_.cpp.

References CSeqInterval_Base::Reset().

~CSeqLocation()

CSeqLocation::~CSeqLocation

(

void

)

Definition at line 50 of file SeqLocation.cpp.

~CSeqLocation_Base()

CSeqLocation_Base::~CSeqLocation_Base ( void  )

virtual

Definition at line 166 of file SeqLocation_.cpp.

References CSeqLocation_Base::Reset().

~CSequenceVariant()

CSequenceVariant::~CSequenceVariant

(

void

)

Definition at line 50 of file SequenceVariant.cpp.

~CSequenceVariant_Base()

CSequenceVariant_Base::~CSequenceVariant_Base ( void  )

virtual

Definition at line 93 of file SequenceVariant_.cpp.

~CSimpleVariant()

CSimpleVariant::~CSimpleVariant

(

void

)

Definition at line 50 of file SimpleVariant.cpp.

~CSimpleVariant_Base()

CSimpleVariant_Base::~CSimpleVariant_Base ( void  )

virtual

Definition at line 534 of file SimpleVariant_.cpp.

~CSimpleVariantSeq()

CSimpleVariantSeq::~CSimpleVariantSeq

(

void

)

Definition at line 50 of file SimpleVariantSeq.cpp.

~CSimpleVariantSeq_Base()

CSimpleVariantSeq_Base::~CSimpleVariantSeq_Base ( void  )

virtual

Definition at line 84 of file SimpleVariantSeq_.cpp.

~CSubsequence()

CSubsequence::~CSubsequence

(

void

)

Definition at line 50 of file Subsequence.cpp.

~CSubsequence_Base()

CSubsequence_Base::~CSubsequence_Base ( void  )

virtual

Definition at line 101 of file Subsequence_.cpp.

~CVariant()

CVariant::~CVariant

(

void

)

~CVariant_Base()

CVariant_Base::~CVariant_Base ( void  )

virtual

Definition at line 142 of file Variant_.cpp.

References CVariant_Base::Reset().

~CVariantExpression()

CVariantExpression::~CVariantExpression

(

void

)

Definition at line 50 of file VariantExpression.cpp.

~CVariantExpression_Base()

CVariantExpression_Base::~CVariantExpression_Base ( void  )

virtual

Definition at line 106 of file VariantExpression_.cpp.

Variable Documentation

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

union { ... }

m_Aa

string CAaSite_Base::m_Aa

private

Definition at line 186 of file AaSite_.hpp.

Referenced by CAaSite_Base::GetAa(), CAaSite_Base::ResetAa(), and CAaSite_Base::SetAa().

m_Base

CRef< TBase > CNtSite_Base::m_Base

private

Definition at line 835 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetBase(), CNtSite_Base::IsSetBase(), CNtSite_Base::ResetBase(), and CNtSite_Base::SetBase().

m_choice [1/17]

E_Choice CAaLocation_Base::m_choice

private

Definition at line 238 of file AaLocation_.hpp.

Referenced by CAaLocation_Base::CheckSelected(), CAaLocation_Base::DoSelect(), CAaLocation_Base::IsInt(), CAaLocation_Base::IsRange(), CAaLocation_Base::IsSite(), CAaLocation_Base::Reset(), CAaLocation_Base::ResetSelection(), CAaLocation_Base::SetInt(), CAaLocation_Base::SetRange(), CAaLocation_Base::SetSite(), CAaLocation_Base::ThrowInvalidSelection(), and CAaLocation_Base::Which().

m_choice [2/17]

E_Choice CCount_Base::C_Range::C_Start::m_choice

private

Definition at line 223 of file Count_.hpp.

Referenced by CCount_Base::C_Range::C_Start::Reset(), and CCount_Base::C_Range::C_Start::Which().

m_choice [3/17]

E_Choice CCount_Base::C_Range::C_Stop::m_choice

private

Definition at line 359 of file Count_.hpp.

m_choice [4/17]

E_Choice CCount_Base::m_choice

private

Definition at line 638 of file Count_.hpp.

Referenced by CCount_Base::C_Range::C_Start::CheckSelected(), CCount_Base::C_Range::C_Stop::CheckSelected(), CCount_Base::CheckSelected(), CCount_Base::C_Range::C_Start::DoSelect(), CCount_Base::C_Range::C_Stop::DoSelect(), CCount_Base::DoSelect(), CCount_Base::IsFuzzy_val(), CCount_Base::IsRange(), CCount_Base::C_Range::C_Start::IsUnknown(), CCount_Base::C_Range::C_Stop::IsUnknown(), CCount_Base::IsUnknown(), CCount_Base::C_Range::C_Start::IsVal(), CCount_Base::C_Range::C_Stop::IsVal(), CCount_Base::IsVal(), CCount_Base::C_Range::C_Stop::Reset(), CCount_Base::Reset(), CCount_Base::C_Range::C_Start::ResetSelection(), CCount_Base::C_Range::C_Stop::ResetSelection(), CCount_Base::ResetSelection(), CCount_Base::SetRange(), CCount_Base::C_Range::C_Start::ThrowInvalidSelection(), CCount_Base::C_Range::C_Stop::ThrowInvalidSelection(), CCount_Base::ThrowInvalidSelection(), CCount_Base::C_Range::C_Stop::Which(), and CCount_Base::Which().

m_choice [5/17]

E_Choice CDelins_Base::C_Inserted_seq_info::m_choice

private

Definition at line 289 of file Delins_.hpp.

Referenced by CDelins_Base::C_Inserted_seq_info::Reset(), and CDelins_Base::C_Inserted_seq_info::Which().

m_choice [6/17]

E_Choice CFrameshift_Base::m_choice

private

Definition at line 192 of file Frameshift_.hpp.

Referenced by CFrameshift_Base::CheckSelected(), CFrameshift_Base::DoSelect(), CFrameshift_Base::IsAasite(), CFrameshift_Base::IsStopcodon(), CFrameshift_Base::Reset(), CFrameshift_Base::ResetSelection(), CFrameshift_Base::SetAasite(), CFrameshift_Base::ThrowInvalidSelection(), and CFrameshift_Base::Which().

m_choice [7/17]

E_Choice CInsertion_Base::C_Seqinfo::m_choice

private

Definition at line 289 of file Insertion_.hpp.

Referenced by CInsertion_Base::C_Seqinfo::Reset(), and CInsertion_Base::C_Seqinfo::Which().

m_choice [8/17]

E_Choice CNtIntLimit_Base::m_choice

private

Definition at line 209 of file NtIntLimit_.hpp.

Referenced by CNtIntLimit_Base::CheckSelected(), CNtIntLimit_Base::DoSelect(), CNtIntLimit_Base::IsRange(), CNtIntLimit_Base::IsSite(), CNtIntLimit_Base::Reset(), CNtIntLimit_Base::ResetSelection(), CNtIntLimit_Base::SetRange(), CNtIntLimit_Base::SetSite(), CNtIntLimit_Base::ThrowInvalidSelection(), and CNtIntLimit_Base::Which().

m_choice [9/17]

E_Choice CNtLocation_Base::m_choice

private

Definition at line 238 of file NtLocation_.hpp.

Referenced by CNtLocation_Base::CheckSelected(), CNtLocation_Base::DoSelect(), CNtLocation_Base::IsInt(), CNtLocation_Base::IsRange(), CNtLocation_Base::IsSite(), CNtLocation_Base::Reset(), CNtLocation_Base::ResetSelection(), CNtLocation_Base::SetInt(), CNtLocation_Base::SetRange(), CNtLocation_Base::SetSite(), CNtLocation_Base::ThrowInvalidSelection(), and CNtLocation_Base::Which().

m_choice [10/17]

E_Choice CNtSite_Base::C_Base::m_choice

private

Definition at line 211 of file NtSite_.hpp.

Referenced by CNtSite_Base::C_Base::Reset(), and CNtSite_Base::C_Base::Which().

m_choice [11/17]

E_Choice CNtSite_Base::C_Offset::m_choice

private

Definition at line 359 of file NtSite_.hpp.

m_choice [12/17]

E_Choice CNtSite_Base::C_Utr::m_choice

private

Definition at line 478 of file NtSite_.hpp.

m_choice [13/17]

E_Choice CProteinExtension_Base::m_choice

private

Definition at line 209 of file ProteinExtension_.hpp.

Referenced by CProteinExtension_Base::CheckSelected(), CProteinExtension_Base::DoSelect(), CProteinExtension_Base::IsCterm_ext(), CProteinExtension_Base::IsNterm_ext(), CProteinExtension_Base::Reset(), CProteinExtension_Base::ResetSelection(), CProteinExtension_Base::SetCterm_ext(), CProteinExtension_Base::SetNterm_ext(), CProteinExtension_Base::ThrowInvalidSelection(), and CProteinExtension_Base::Which().

m_choice [14/17]

E_Choice CSeqInterval_Base::m_choice

private

Definition at line 209 of file SeqInterval_.hpp.

Referenced by CSeqInterval_Base::CheckSelected(), CSeqInterval_Base::DoSelect(), CSeqInterval_Base::IsAaint(), CSeqInterval_Base::IsNtint(), CSeqInterval_Base::Reset(), CSeqInterval_Base::ResetSelection(), CSeqInterval_Base::SetAaint(), CSeqInterval_Base::SetNtint(), CSeqInterval_Base::ThrowInvalidSelection(), and CSeqInterval_Base::Which().

m_choice [15/17]

E_Choice CSeqLocation_Base::m_choice

private

Definition at line 209 of file SeqLocation_.hpp.

Referenced by CSeqLocation_Base::CheckSelected(), CSeqLocation_Base::DoSelect(), CSeqLocation_Base::IsAaloc(), CSeqLocation_Base::IsNtloc(), CSeqLocation_Base::Reset(), CSeqLocation_Base::ResetSelection(), CSeqLocation_Base::SetAaloc(), CSeqLocation_Base::SetNtloc(), CSeqLocation_Base::ThrowInvalidSelection(), and CSeqLocation_Base::Which().

m_choice [16/17]

E_Choice CSimpleVariant_Base::C_Type::m_choice

private

Definition at line 545 of file SimpleVariant_.hpp.

Referenced by CSimpleVariant_Base::C_Type::Reset(), and CSimpleVariant_Base::C_Type::Which().

m_choice [17/17]

E_Choice CVariant_Base::m_choice

private

Definition at line 213 of file Variant_.hpp.

Referenced by CVariant_Base::CheckSelected(), CVariant_Base::DoSelect(), CVariant_Base::IsSimple(), CVariant_Base::IsSpecial(), CVariant_Base::Reset(), CVariant_Base::ResetSelection(), CVariant_Base::SetSimple(), CVariant_Base::ThrowInvalidSelection(), and CVariant_Base::Which().

m_Complex

int CSequenceVariant_Base::m_Complex

private

Definition at line 232 of file SequenceVariant_.hpp.

Referenced by CSequenceVariant_Base::GetComplex(), CSequenceVariant_Base::ResetComplex(), and CSequenceVariant_Base::SetComplex().

m_Count

CRef< TCount > CRepeat_Base::m_Count

private

Definition at line 231 of file Repeat_.hpp.

Referenced by CRepeat_Base::GetCount(), CRepeat_Base::IsSetCount(), CRepeat_Base::ResetCount(), and CRepeat_Base::SetCount().

m_Deleted_raw_seq

string CDelins_Base::m_Deleted_raw_seq

private

Definition at line 442 of file Delins_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CDelins_Base::GetDeleted_raw_seq(), CDelins_Base::ResetDeleted_raw_seq(), and CDelins_Base::SetDeleted_raw_seq().

m_Final [1/2]

string CNaSub_Base::m_Final

private

Definition at line 231 of file NaSub_.hpp.

Referenced by CNaSub_Base::GetFinal(), CNaSub_Base::ResetFinal(), and CNaSub_Base::SetFinal().

m_Final [2/2]

string CProteinSub_Base::m_Final

private

Definition at line 239 of file ProteinSub_.hpp.

Referenced by CProteinSub_Base::GetFinal(), CProteinSub_Base::ResetFinal(), and CProteinSub_Base::SetFinal().

m_Fuzzy [1/3]

bool CNtSite_Base::m_Fuzzy

private

Definition at line 839 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetFuzzy(), CNtSite_Base::ResetFuzzy(), and CNtSite_Base::SetFuzzy().

m_Fuzzy [2/3]

bool CSimpleVariant_Base::m_Fuzzy

private

Definition at line 657 of file SimpleVariant_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSimpleVariant_Base::GetFuzzy(), CSimpleVariant_Base::ResetFuzzy(), and CSimpleVariant_Base::SetFuzzy().

m_Fuzzy [3/3]

bool CSimpleVariantSeq_Base::m_Fuzzy

private

Definition at line 230 of file SimpleVariantSeq_.hpp.

Referenced by CSimpleVariantSeq_Base::GetFuzzy(), CSimpleVariantSeq_Base::ResetFuzzy(), and CSimpleVariantSeq_Base::SetFuzzy().

m_Fuzzy_offset

bool CNtSite_Base::m_Fuzzy_offset

private

Definition at line 840 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetFuzzy_offset(), CNtSite_Base::ResetFuzzy_offset(), and CNtSite_Base::SetFuzzy_offset().

m_Fuzzy_val [1/2]

TFuzzy_val CCount_Base::m_Fuzzy_val

Definition at line 646 of file Count_.hpp.

Referenced by BEGIN_NAMED_BASE_CHOICE_INFO(), CCount_Base::DoSelect(), CCount_Base::GetFuzzy_val(), and CCount_Base::SetFuzzy_val().

[2/2]

TFuzzy_val { ... } ::m_Fuzzy_val

Definition at line 646 of file Count_.hpp.

m_Identifier

string CSubsequence_Base::m_Identifier

private

Definition at line 230 of file Subsequence_.hpp.

Referenced by CSubsequence_Base::GetIdentifier(), CSubsequence_Base::ResetIdentifier(), and CSubsequence_Base::SetIdentifier().

m_Index

TSeqPos CAaSite_Base::m_Index

private

Definition at line 185 of file AaSite_.hpp.

Referenced by CAaSite_Base::GetIndex(), CAaSite_Base::ResetIndex(), and CAaSite_Base::SetIndex().

m_Initial [1/2]

string CNaSub_Base::m_Initial

private

Definition at line 230 of file NaSub_.hpp.

Referenced by CNaSub_Base::GetInitial(), CNaSub_Base::ResetInitial(), and CNaSub_Base::SetInitial().

m_Initial [2/2]

CRef< TInitial > CProteinSub_Base::m_Initial

private

Definition at line 238 of file ProteinSub_.hpp.

Referenced by CProteinSub_Base::GetInitial(), CProteinSub_Base::IsSetInitial(), CProteinSub_Base::ResetInitial(), and CProteinSub_Base::SetInitial().

m_Input_expr

string CVariantExpression_Base::m_Input_expr

private

Definition at line 232 of file VariantExpression_.hpp.

Referenced by CVariantExpression_Base::GetInput_expr(), CVariantExpression_Base::ResetInput_expr(), and CVariantExpression_Base::SetInput_expr().

m_Inserted_seq_info

CRef< TInserted_seq_info > CDelins_Base::m_Inserted_seq_info

private

Definition at line 443 of file Delins_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CDelins_Base::GetInserted_seq_info(), CDelins_Base::IsSetInserted_seq_info(), CDelins_Base::ResetInserted_seq_info(), and CDelins_Base::SetInserted_seq_info().

m_Int [1/2]

CRef< TInt > CInsertion_Base::m_Int

private

Definition at line 400 of file Insertion_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CInsertion_Base::GetInt(), CInsertion_Base::IsSetInt(), CInsertion_Base::ResetInt(), and CInsertion_Base::SetInt().

m_Int [2/2]

CRef< TInt > CSubsequence_Base::m_Int

private

Definition at line 232 of file Subsequence_.hpp.

Referenced by CSubsequence_Base::GetInt(), CSubsequence_Base::IsSetInt(), CSubsequence_Base::ResetInt(), and CSubsequence_Base::SetInt().

m_Length

CRef< TLength > CCtermExtension_Base::m_Length

private

Definition at line 230 of file CtermExtension_.hpp.

Referenced by CCtermExtension_Base::GetLength(), CCtermExtension_Base::IsSetLength(), CCtermExtension_Base::ResetLength(), and CCtermExtension_Base::SetLength().

m_Loc [1/7]

CRef< TLoc > CConversion_Base::m_Loc

private

Definition at line 184 of file Conversion_.hpp.

Referenced by CConversion_Base::GetLoc(), CConversion_Base::IsSetLoc(), CConversion_Base::ResetLoc(), and CConversion_Base::SetLoc().

m_Loc [2/7]

CRef< TLoc > CDeletion_Base::m_Loc

private

Definition at line 190 of file Deletion_.hpp.

Referenced by CDeletion_Base::GetLoc(), CDeletion_Base::IsSetLoc(), CDeletion_Base::ResetLoc(), and CDeletion_Base::SetLoc().

m_Loc [3/7]

CRef< TLoc > CDelins_Base::m_Loc

private

Definition at line 441 of file Delins_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CDelins_Base::GetLoc(), CDelins_Base::IsSetLoc(), CDelins_Base::ResetLoc(), and CDelins_Base::SetLoc().

m_Loc [4/7]

CRef< TLoc > CDuplication_Base::m_Loc

private

Definition at line 190 of file Duplication_.hpp.

Referenced by CDuplication_Base::GetLoc(), CDuplication_Base::IsSetLoc(), CDuplication_Base::ResetLoc(), and CDuplication_Base::SetLoc().

m_Loc [5/7]

CRef< TLoc > CNaIdentity_Base::m_Loc

private

Definition at line 189 of file NaIdentity_.hpp.

Referenced by CNaIdentity_Base::GetLoc(), CNaIdentity_Base::IsSetLoc(), CNaIdentity_Base::ResetLoc(), and CNaIdentity_Base::SetLoc().

m_Loc [6/7]

CRef< TLoc > CNaSub_Base::m_Loc

private

Definition at line 229 of file NaSub_.hpp.

Referenced by CNaSub_Base::GetLoc(), CNaSub_Base::IsSetLoc(), CNaSub_Base::ResetLoc(), and CNaSub_Base::SetLoc().

m_Loc [7/7]

CRef< TLoc > CRepeat_Base::m_Loc

private

Definition at line 230 of file Repeat_.hpp.

Referenced by CRepeat_Base::GetLoc(), CRepeat_Base::IsSetLoc(), CRepeat_Base::ResetLoc(), and CRepeat_Base::SetLoc().

m_NewAa [1/2]

string CCtermExtension_Base::m_NewAa

private

Definition at line 229 of file CtermExtension_.hpp.

Referenced by CCtermExtension_Base::GetNewAa(), CCtermExtension_Base::ResetNewAa(), and CCtermExtension_Base::SetNewAa().

m_NewAa [2/2]

string CNtermExtension_Base::m_NewAa

private

Definition at line 190 of file NtermExtension_.hpp.

Referenced by CNtermExtension_Base::GetNewAa(), CNtermExtension_Base::ResetNewAa(), and CNtermExtension_Base::SetNewAa().

m_NewStart

CRef< TNewStart > CNtermExtension_Base::m_NewStart

private

Definition at line 189 of file NtermExtension_.hpp.

Referenced by CNtermExtension_Base::GetNewStart(), CNtermExtension_Base::IsSetNewStart(), CNtermExtension_Base::ResetNewStart(), and CNtermExtension_Base::SetNewStart().

m_Ntint

CRef< TNtint > CInversion_Base::m_Ntint

private

Definition at line 229 of file Inversion_.hpp.

Referenced by CInversion_Base::GetNtint(), CInversion_Base::IsSetNtint(), CInversion_Base::ResetNtint(), and CInversion_Base::SetNtint().

m_Nucleotide

string CNaIdentity_Base::m_Nucleotide

private

Definition at line 190 of file NaIdentity_.hpp.

Referenced by CNaIdentity_Base::GetNucleotide(), CNaIdentity_Base::ResetNucleotide(), and CNaIdentity_Base::SetNucleotide().

m_object [1/17]

NCBI_NS_NCBI::CSerialObject* CAaLocation_Base::m_object

private

Definition at line 244 of file AaLocation_.hpp.

Referenced by CAaLocation_Base::DoSelect(), CAaLocation_Base::GetInt(), CAaLocation_Base::GetRange(), CAaLocation_Base::GetSite(), CAaLocation_Base::ResetSelection(), CAaLocation_Base::SetInt(), CAaLocation_Base::SetRange(), and CAaLocation_Base::SetSite().

m_object [2/17]

NCBI_NS_NCBI::CSerialObject* CCount_Base::m_object

Definition at line 647 of file Count_.hpp.

Referenced by BEGIN_NAMED_BASE_CHOICE_INFO(), CCount_Base::DoSelect(), CCount_Base::GetRange(), CCount_Base::ResetSelection(), and CCount_Base::SetRange().

[3/17]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 647 of file Count_.hpp.

m_object [4/17]

NCBI_NS_NCBI::CSerialObject* CDelins_Base::C_Inserted_seq_info::m_object

Definition at line 297 of file Delins_.hpp.

[5/17]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 297 of file Delins_.hpp.

[6/17]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 199 of file Frameshift_.hpp.

m_object [7/17]

NCBI_NS_NCBI::CSerialObject* CFrameshift_Base::m_object

Definition at line 199 of file Frameshift_.hpp.

Referenced by CFrameshift_Base::DoSelect(), CFrameshift_Base::GetAasite(), CFrameshift_Base::ResetSelection(), and CFrameshift_Base::SetAasite().

m_object [8/17]

NCBI_NS_NCBI::CSerialObject* CInsertion_Base::C_Seqinfo::m_object

Definition at line 297 of file Insertion_.hpp.

[9/17]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 297 of file Insertion_.hpp.

m_object [10/17]

NCBI_NS_NCBI::CSerialObject* CNtIntLimit_Base::m_object

private

Definition at line 215 of file NtIntLimit_.hpp.

Referenced by CNtIntLimit_Base::DoSelect(), CNtIntLimit_Base::GetRange(), CNtIntLimit_Base::GetSite(), CNtIntLimit_Base::ResetSelection(), CNtIntLimit_Base::SetRange(), and CNtIntLimit_Base::SetSite().

m_object [11/17]

NCBI_NS_NCBI::CSerialObject* CNtLocation_Base::m_object

private

Definition at line 244 of file NtLocation_.hpp.

Referenced by CNtLocation_Base::DoSelect(), CNtLocation_Base::GetInt(), CNtLocation_Base::GetRange(), CNtLocation_Base::GetSite(), CNtLocation_Base::ResetSelection(), CNtLocation_Base::SetInt(), CNtLocation_Base::SetRange(), and CNtLocation_Base::SetSite().

m_object [12/17]

NCBI_NS_NCBI::CSerialObject* CProteinExtension_Base::m_object

private

Definition at line 215 of file ProteinExtension_.hpp.

Referenced by CProteinExtension_Base::DoSelect(), CProteinExtension_Base::GetCterm_ext(), CProteinExtension_Base::GetNterm_ext(), CProteinExtension_Base::ResetSelection(), CProteinExtension_Base::SetCterm_ext(), and CProteinExtension_Base::SetNterm_ext().

m_object [13/17]

NCBI_NS_NCBI::CSerialObject* CSeqInterval_Base::m_object

private

Definition at line 215 of file SeqInterval_.hpp.

Referenced by CSeqInterval_Base::DoSelect(), CSeqInterval_Base::GetAaint(), CSeqInterval_Base::GetNtint(), CSeqInterval_Base::ResetSelection(), CSeqInterval_Base::SetAaint(), and CSeqInterval_Base::SetNtint().

m_object [14/17]

NCBI_NS_NCBI::CSerialObject* CSeqLocation_Base::m_object

private

Definition at line 215 of file SeqLocation_.hpp.

Referenced by CSeqLocation_Base::DoSelect(), CSeqLocation_Base::GetAaloc(), CSeqLocation_Base::GetNtloc(), CSeqLocation_Base::ResetSelection(), CSeqLocation_Base::SetAaloc(), and CSeqLocation_Base::SetNtloc().

m_object [15/17]

NCBI_NS_NCBI::CSerialObject* CSimpleVariant_Base::C_Type::m_object

private

Definition at line 551 of file SimpleVariant_.hpp.

m_object [16/17]

NCBI_NS_NCBI::CSerialObject* CVariant_Base::m_object

Definition at line 221 of file Variant_.hpp.

Referenced by CVariant_Base::DoSelect(), CVariant_Base::GetSimple(), CVariant_Base::ResetSelection(), and CVariant_Base::SetSimple().

[17/17]

NCBI_NS_NCBI::CSerialObject* { ... } ::m_object

Definition at line 221 of file Variant_.hpp.

m_Offset

CRef< TOffset > CNtSite_Base::m_Offset

private

Definition at line 836 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetOffset(), CNtSite_Base::IsSetOffset(), CNtSite_Base::ResetOffset(), and CNtSite_Base::SetOffset().

m_Origin

CRef< TOrigin > CConversion_Base::m_Origin

private

Definition at line 185 of file Conversion_.hpp.

Referenced by CConversion_Base::GetOrigin(), CConversion_Base::IsSetOrigin(), CConversion_Base::ResetOrigin(), and CConversion_Base::SetOrigin().

m_Raw_seq [1/4]

string CDeletion_Base::m_Raw_seq

private

Definition at line 191 of file Deletion_.hpp.

Referenced by CDeletion_Base::GetRaw_seq(), CDeletion_Base::ResetRaw_seq(), and CDeletion_Base::SetRaw_seq().

m_Raw_seq [2/4]

string CDuplication_Base::m_Raw_seq

private

Definition at line 191 of file Duplication_.hpp.

Referenced by CDuplication_Base::GetRaw_seq(), CDuplication_Base::ResetRaw_seq(), and CDuplication_Base::SetRaw_seq().

m_Raw_seq [3/4]

string CInversion_Base::m_Raw_seq

private

Definition at line 230 of file Inversion_.hpp.

Referenced by CInversion_Base::GetRaw_seq(), CInversion_Base::ResetRaw_seq(), and CInversion_Base::SetRaw_seq().

m_Raw_seq [4/4]

string CRepeat_Base::m_Raw_seq

private

Definition at line 232 of file Repeat_.hpp.

Referenced by CRepeat_Base::GetRaw_seq(), CRepeat_Base::ResetRaw_seq(), and CRepeat_Base::SetRaw_seq().

m_Reference_id

string CVariantExpression_Base::m_Reference_id

private

Definition at line 233 of file VariantExpression_.hpp.

Referenced by CVariantExpression_Base::GetReference_id(), CVariantExpression_Base::ResetReference_id(), and CVariantExpression_Base::SetReference_id().

m_RefStop

int CCtermExtension_Base::m_RefStop

private

Definition at line 228 of file CtermExtension_.hpp.

Referenced by CCtermExtension_Base::GetRefStop(), CCtermExtension_Base::ResetRefStop(), and CCtermExtension_Base::SetRefStop().

m_Seqid

string CNtSite_Base::m_Seqid

private

Definition at line 833 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetSeqid(), CNtSite_Base::ResetSeqid(), and CNtSite_Base::SetSeqid().

m_Seqinfo

CRef< TSeqinfo > CInsertion_Base::m_Seqinfo

private

Definition at line 401 of file Insertion_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CInsertion_Base::GetSeqinfo(), CInsertion_Base::IsSetSeqinfo(), CInsertion_Base::ResetSeqinfo(), and CInsertion_Base::SetSeqinfo().

m_Seqtype [1/2]

int CNtSite_Base::m_Seqtype

private

Definition at line 834 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetSeqtype(), CNtSite_Base::ResetSeqtype(), and CNtSite_Base::SetSeqtype().

m_Seqtype [2/2]

int CSequenceVariant_Base::m_Seqtype

private

Definition at line 230 of file SequenceVariant_.hpp.

Referenced by CSequenceVariant_Base::GetSeqtype(), CSequenceVariant_Base::ResetSeqtype(), and CSequenceVariant_Base::SetSeqtype().

m_Sequence_variant

CRef< TSequence_variant > CVariantExpression_Base::m_Sequence_variant

private

Definition at line 234 of file VariantExpression_.hpp.

Referenced by CVariantExpression_Base::GetSequence_variant(), CVariantExpression_Base::IsSetSequence_variant(), CVariantExpression_Base::ResetSequence_variant(), and CVariantExpression_Base::SetSequence_variant().

m_set_State [1/24]

Uint4 CAaInterval_Base::m_set_State[1]

private

Definition at line 183 of file AaInterval_.hpp.

Referenced by CAaInterval_Base::CAaInterval_Base().

m_set_State [2/24]

Uint4 CAaSite_Base::m_set_State[1]

private

Definition at line 184 of file AaSite_.hpp.

Referenced by CAaSite_Base::CAaSite_Base(), CAaSite_Base::IsSetAa(), CAaSite_Base::IsSetIndex(), CAaSite_Base::ResetAa(), CAaSite_Base::ResetIndex(), CAaSite_Base::SetAa(), and CAaSite_Base::SetIndex().

m_set_State [3/24]

Uint4 CAaSiteRange_Base::m_set_State[1]

private

Definition at line 183 of file AaSiteRange_.hpp.

Referenced by CAaSiteRange_Base::CAaSiteRange_Base().

m_set_State [4/24]

Uint4 CConversion_Base::m_set_State[1]

private

Definition at line 183 of file Conversion_.hpp.

Referenced by CConversion_Base::CConversion_Base().

m_set_State [5/24]

Uint4 CCount_Base::C_Range::m_set_State[1]

private

Definition at line 468 of file Count_.hpp.

Referenced by CCount_Base::C_Range::C_Range().

m_set_State [6/24]

Uint4 CCtermExtension_Base::m_set_State[1]

private

Definition at line 227 of file CtermExtension_.hpp.

Referenced by CCtermExtension_Base::CCtermExtension_Base(), CCtermExtension_Base::IsSetNewAa(), CCtermExtension_Base::IsSetRefStop(), CCtermExtension_Base::ResetNewAa(), CCtermExtension_Base::ResetRefStop(), CCtermExtension_Base::SetNewAa(), and CCtermExtension_Base::SetRefStop().

m_set_State [7/24]

Uint4 CDeletion_Base::m_set_State[1]

private

Definition at line 189 of file Deletion_.hpp.

Referenced by CDeletion_Base::CDeletion_Base(), CDeletion_Base::IsSetRaw_seq(), CDeletion_Base::ResetRaw_seq(), and CDeletion_Base::SetRaw_seq().

m_set_State [8/24]

Uint4 CDelins_Base::m_set_State[1]

private

Definition at line 440 of file Delins_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CDelins_Base::CDelins_Base(), CDelins_Base::IsSetDeleted_raw_seq(), CDelins_Base::ResetDeleted_raw_seq(), and CDelins_Base::SetDeleted_raw_seq().

m_set_State [9/24]

Uint4 CDuplication_Base::m_set_State[1]

private

Definition at line 189 of file Duplication_.hpp.

Referenced by CDuplication_Base::CDuplication_Base(), CDuplication_Base::IsSetRaw_seq(), CDuplication_Base::ResetRaw_seq(), and CDuplication_Base::SetRaw_seq().

m_set_State [10/24]

Uint4 CInsertion_Base::m_set_State[1]

private

Definition at line 399 of file Insertion_.hpp.

Referenced by CInsertion_Base::CInsertion_Base().

m_set_State [11/24]

Uint4 CInversion_Base::m_set_State[1]

private

Definition at line 228 of file Inversion_.hpp.

Referenced by CInversion_Base::CInversion_Base(), CInversion_Base::IsSetRaw_seq(), CInversion_Base::IsSetSize(), CInversion_Base::ResetRaw_seq(), CInversion_Base::ResetSize(), CInversion_Base::SetRaw_seq(), and CInversion_Base::SetSize().

m_set_State [12/24]

Uint4 CNaIdentity_Base::m_set_State[1]

private

Definition at line 188 of file NaIdentity_.hpp.

Referenced by CNaIdentity_Base::CNaIdentity_Base(), CNaIdentity_Base::IsSetNucleotide(), CNaIdentity_Base::ResetNucleotide(), and CNaIdentity_Base::SetNucleotide().

m_set_State [13/24]

Uint4 CNaSub_Base::m_set_State[1]

private

Definition at line 228 of file NaSub_.hpp.

Referenced by CNaSub_Base::CNaSub_Base(), CNaSub_Base::IsSetFinal(), CNaSub_Base::IsSetInitial(), CNaSub_Base::ResetFinal(), CNaSub_Base::ResetInitial(), CNaSub_Base::SetFinal(), and CNaSub_Base::SetInitial().

m_set_State [14/24]

Uint4 CNtermExtension_Base::m_set_State[1]

private

Definition at line 188 of file NtermExtension_.hpp.

Referenced by CNtermExtension_Base::CNtermExtension_Base(), CNtermExtension_Base::IsSetNewAa(), CNtermExtension_Base::ResetNewAa(), and CNtermExtension_Base::SetNewAa().

m_set_State [15/24]

Uint4 CNtInterval_Base::m_set_State[1]

private

Definition at line 183 of file NtInterval_.hpp.

Referenced by CNtInterval_Base::CNtInterval_Base().

m_set_State [16/24]

Uint4 CNtSite_Base::m_set_State[1]

private

Definition at line 832 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::CNtSite_Base(), CNtSite_Base::IsSetFuzzy(), CNtSite_Base::IsSetFuzzy_offset(), CNtSite_Base::IsSetSeqid(), CNtSite_Base::IsSetSeqtype(), CNtSite_Base::IsSetStrand_minus(), CNtSite_Base::ResetFuzzy(), CNtSite_Base::ResetFuzzy_offset(), CNtSite_Base::ResetSeqid(), CNtSite_Base::ResetSeqtype(), CNtSite_Base::ResetStrand_minus(), CNtSite_Base::SetFuzzy(), CNtSite_Base::SetFuzzy_offset(), CNtSite_Base::SetSeqid(), CNtSite_Base::SetSeqtype(), and CNtSite_Base::SetStrand_minus().

m_set_State [17/24]

Uint4 CNtSiteRange_Base::m_set_State[1]

private

Definition at line 183 of file NtSiteRange_.hpp.

Referenced by CNtSiteRange_Base::CNtSiteRange_Base().

m_set_State [18/24]

Uint4 CProteinSub_Base::m_set_State[1]

private

Definition at line 236 of file ProteinSub_.hpp.

Referenced by CProteinSub_Base::CProteinSub_Base(), CProteinSub_Base::IsSetFinal(), CProteinSub_Base::IsSetType(), CProteinSub_Base::ResetFinal(), CProteinSub_Base::ResetType(), CProteinSub_Base::SetFinal(), and CProteinSub_Base::SetType().

m_set_State [19/24]

Uint4 CRepeat_Base::m_set_State[1]

private

Definition at line 229 of file Repeat_.hpp.

Referenced by CRepeat_Base::CRepeat_Base(), CRepeat_Base::IsSetRaw_seq(), CRepeat_Base::ResetRaw_seq(), and CRepeat_Base::SetRaw_seq().

m_set_State [20/24]

Uint4 CSequenceVariant_Base::m_set_State[1]

private

Definition at line 229 of file SequenceVariant_.hpp.

Referenced by CSequenceVariant_Base::CSequenceVariant_Base(), CSequenceVariant_Base::IsSetComplex(), CSequenceVariant_Base::IsSetSeqtype(), CSequenceVariant_Base::IsSetSubvariants(), CSequenceVariant_Base::ResetComplex(), CSequenceVariant_Base::ResetSeqtype(), CSequenceVariant_Base::ResetSubvariants(), CSequenceVariant_Base::SetComplex(), CSequenceVariant_Base::SetSeqtype(), and CSequenceVariant_Base::SetSubvariants().

m_set_State [21/24]

Uint4 CSimpleVariant_Base::m_set_State[1]

private

Definition at line 655 of file SimpleVariant_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSimpleVariant_Base::CSimpleVariant_Base(), CSimpleVariant_Base::IsSetFuzzy(), CSimpleVariant_Base::ResetFuzzy(), and CSimpleVariant_Base::SetFuzzy().

m_set_State [22/24]

Uint4 CSimpleVariantSeq_Base::m_set_State[1]

private

Definition at line 227 of file SimpleVariantSeq_.hpp.

Referenced by CSimpleVariantSeq_Base::CSimpleVariantSeq_Base(), CSimpleVariantSeq_Base::IsSetFuzzy(), CSimpleVariantSeq_Base::IsSetSisters(), CSimpleVariantSeq_Base::IsSetVariants(), CSimpleVariantSeq_Base::ResetFuzzy(), CSimpleVariantSeq_Base::ResetSisters(), CSimpleVariantSeq_Base::ResetVariants(), CSimpleVariantSeq_Base::SetFuzzy(), CSimpleVariantSeq_Base::SetSisters(), and CSimpleVariantSeq_Base::SetVariants().

m_set_State [23/24]

Uint4 CSubsequence_Base::m_set_State[1]

private

Definition at line 229 of file Subsequence_.hpp.

Referenced by CSubsequence_Base::CSubsequence_Base(), CSubsequence_Base::IsSetIdentifier(), CSubsequence_Base::IsSetType(), CSubsequence_Base::ResetIdentifier(), CSubsequence_Base::ResetType(), CSubsequence_Base::SetIdentifier(), and CSubsequence_Base::SetType().

m_set_State [24/24]

Uint4 CVariantExpression_Base::m_set_State[1]

private

Definition at line 231 of file VariantExpression_.hpp.

Referenced by CVariantExpression_Base::CVariantExpression_Base(), CVariantExpression_Base::IsSetInput_expr(), CVariantExpression_Base::IsSetReference_id(), CVariantExpression_Base::ResetInput_expr(), CVariantExpression_Base::ResetReference_id(), CVariantExpression_Base::SetInput_expr(), and CVariantExpression_Base::SetReference_id().

m_Sisters

bool CSimpleVariantSeq_Base::m_Sisters

private

Definition at line 229 of file SimpleVariantSeq_.hpp.

Referenced by CSimpleVariantSeq_Base::GetSisters(), CSimpleVariantSeq_Base::ResetSisters(), and CSimpleVariantSeq_Base::SetSisters().

m_Size

int CInversion_Base::m_Size

private

Definition at line 231 of file Inversion_.hpp.

Referenced by CInversion_Base::GetSize(), CInversion_Base::ResetSize(), and CInversion_Base::SetSize().

[1/2]

TSpecial { ... } ::m_Special

Definition at line 220 of file Variant_.hpp.

m_Special [2/2]

TSpecial CVariant_Base::m_Special

Definition at line 220 of file Variant_.hpp.

Referenced by CVariant_Base::DoSelect(), CVariant_Base::GetSpecial(), and CVariant_Base::SetSpecial().

m_Start [1/5]

CRef< TStart > CAaInterval_Base::m_Start

private

Definition at line 184 of file AaInterval_.hpp.

Referenced by CAaInterval_Base::GetStart(), CAaInterval_Base::IsSetStart(), CAaInterval_Base::ResetStart(), and CAaInterval_Base::SetStart().

m_Start [2/5]

CRef< TStart > CAaSiteRange_Base::m_Start

private

Definition at line 184 of file AaSiteRange_.hpp.

Referenced by CAaSiteRange_Base::GetStart(), CAaSiteRange_Base::IsSetStart(), CAaSiteRange_Base::ResetStart(), and CAaSiteRange_Base::SetStart().

m_Start [3/5]

CRef< TStart > CCount_Base::C_Range::m_Start

private

Definition at line 469 of file Count_.hpp.

Referenced by BEGIN_NAMED_CLASS_INFO(), CCount_Base::C_Range::GetStart(), CCount_Base::C_Range::IsSetStart(), CCount_Base::C_Range::ResetStart(), and CCount_Base::C_Range::SetStart().

m_Start [4/5]

CRef< TStart > CNtInterval_Base::m_Start

private

Definition at line 184 of file NtInterval_.hpp.

Referenced by CNtInterval_Base::GetStart(), CNtInterval_Base::IsSetStart(), CNtInterval_Base::ResetStart(), and CNtInterval_Base::SetStart().

m_Start [5/5]

CRef< TStart > CNtSiteRange_Base::m_Start

private

Definition at line 184 of file NtSiteRange_.hpp.

Referenced by CNtSiteRange_Base::GetStart(), CNtSiteRange_Base::IsSetStart(), CNtSiteRange_Base::ResetStart(), and CNtSiteRange_Base::SetStart().

m_Stop [1/5]

CRef< TStop > CAaInterval_Base::m_Stop

private

Definition at line 185 of file AaInterval_.hpp.

Referenced by CAaInterval_Base::GetStop(), CAaInterval_Base::IsSetStop(), CAaInterval_Base::ResetStop(), and CAaInterval_Base::SetStop().

m_Stop [2/5]

CRef< TStop > CAaSiteRange_Base::m_Stop

private

Definition at line 185 of file AaSiteRange_.hpp.

Referenced by CAaSiteRange_Base::GetStop(), CAaSiteRange_Base::IsSetStop(), CAaSiteRange_Base::ResetStop(), and CAaSiteRange_Base::SetStop().

m_Stop [3/5]

CRef< TStop > CCount_Base::C_Range::m_Stop

private

Definition at line 470 of file Count_.hpp.

Referenced by BEGIN_NAMED_CLASS_INFO(), CCount_Base::C_Range::GetStop(), CCount_Base::C_Range::IsSetStop(), CCount_Base::C_Range::ResetStop(), and CCount_Base::C_Range::SetStop().

m_Stop [4/5]

CRef< TStop > CNtInterval_Base::m_Stop

private

Definition at line 185 of file NtInterval_.hpp.

Referenced by CNtInterval_Base::GetStop(), CNtInterval_Base::IsSetStop(), CNtInterval_Base::ResetStop(), and CNtInterval_Base::SetStop().

m_Stop [5/5]

CRef< TStop > CNtSiteRange_Base::m_Stop

private

Definition at line 185 of file NtSiteRange_.hpp.

Referenced by CNtSiteRange_Base::GetStop(), CNtSiteRange_Base::IsSetStop(), CNtSiteRange_Base::ResetStop(), and CNtSiteRange_Base::SetStop().

m_Strand_minus

bool CNtSite_Base::m_Strand_minus

private

Definition at line 838 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetStrand_minus(), CNtSite_Base::ResetStrand_minus(), and CNtSite_Base::SetStrand_minus().

m_string [1/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CDelins_Base::C_Inserted_seq_info::m_string

Definition at line 296 of file Delins_.hpp.

[2/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 296 of file Delins_.hpp.

m_string [3/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> CInsertion_Base::C_Seqinfo::m_string

Definition at line 296 of file Insertion_.hpp.

[4/4]

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string> { ... } ::m_string

Definition at line 296 of file Insertion_.hpp.

m_Subvariants

list< CRef< CVariant > > CSequenceVariant_Base::m_Subvariants

private

Definition at line 231 of file SequenceVariant_.hpp.

Referenced by CSequenceVariant_Base::GetSubvariants(), CSequenceVariant_Base::ResetSubvariants(), and CSequenceVariant_Base::SetSubvariants().

m_Type [1/3]

int CProteinSub_Base::m_Type

private

Definition at line 237 of file ProteinSub_.hpp.

Referenced by CProteinSub_Base::GetType(), CProteinSub_Base::ResetType(), and CProteinSub_Base::SetType().

m_Type [2/3]

CRef< TType > CSimpleVariant_Base::m_Type

private

Definition at line 656 of file SimpleVariant_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CSimpleVariant_Base::GetType(), CSimpleVariant_Base::IsSetType(), CSimpleVariant_Base::ResetType(), and CSimpleVariant_Base::SetType().

m_Type [3/3]

int CSubsequence_Base::m_Type

private

Definition at line 231 of file Subsequence_.hpp.

Referenced by CSubsequence_Base::GetType(), CSubsequence_Base::ResetType(), and CSubsequence_Base::SetType().

m_Utr

CRef< TUtr > CNtSite_Base::m_Utr

private

Definition at line 837 of file NtSite_.hpp.

Referenced by BEGIN_NAMED_BASE_CLASS_INFO(), CNtSite_Base::GetUtr(), CNtSite_Base::IsSetUtr(), CNtSite_Base::ResetUtr(), and CNtSite_Base::SetUtr().

[1/10]

TVal { ... } ::m_Val

Definition at line 230 of file Count_.hpp.

m_Val [2/10]

TVal CCount_Base::C_Range::C_Start::m_Val

Definition at line 230 of file Count_.hpp.

m_Val [3/10]

TVal CCount_Base::C_Range::C_Stop::m_Val

Definition at line 366 of file Count_.hpp.

[4/10]

TVal { ... } ::m_Val

Definition at line 366 of file Count_.hpp.

m_Val [5/10]

TVal CCount_Base::m_Val

Definition at line 645 of file Count_.hpp.

Referenced by BEGIN_NAMED_BASE_CHOICE_INFO(), BEGIN_NAMED_CHOICE_INFO(), CCount_Base::C_Range::C_Start::DoSelect(), CCount_Base::C_Range::C_Stop::DoSelect(), CCount_Base::DoSelect(), CCount_Base::C_Range::C_Start::GetVal(), CCount_Base::C_Range::C_Stop::GetVal(), CCount_Base::GetVal(), CCount_Base::C_Range::C_Start::SetVal(), CCount_Base::C_Range::C_Stop::SetVal(), and CCount_Base::SetVal().

[6/10]

TVal { ... } ::m_Val

Definition at line 645 of file Count_.hpp.

m_Val [7/10]

TVal CNtSite_Base::C_Base::m_Val

Definition at line 218 of file NtSite_.hpp.

[8/10]

TVal { ... } ::m_Val

Definition at line 218 of file NtSite_.hpp.

[9/10]

TVal { ... } ::m_Val

Definition at line 366 of file NtSite_.hpp.

m_Val [10/10]

TVal CNtSite_Base::C_Offset::m_Val

Definition at line 366 of file NtSite_.hpp.

m_Variants

list< CRef< CSimpleVariant > > CSimpleVariantSeq_Base::m_Variants

private

Definition at line 228 of file SimpleVariantSeq_.hpp.

Referenced by CSimpleVariantSeq_Base::GetVariants(), CSimpleVariantSeq_Base::ResetVariants(), and CSimpleVariantSeq_Base::SetVariants().

sm_SelectionNames [1/17]

const char *const CAaLocation_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "site",
    "range",
    "int"
}

Definition at line 242 of file AaLocation_.hpp.

Referenced by CAaLocation_Base::SelectionName(), and CAaLocation_Base::ThrowInvalidSelection().

sm_SelectionNames [2/17]

const char *const CCount_Base::C_Range::C_Start::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "val",
    "unknown"
}

Definition at line 227 of file Count_.hpp.

sm_SelectionNames [3/17]

const char *const CCount_Base::C_Range::C_Stop::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "val",
    "unknown"
}

Definition at line 363 of file Count_.hpp.

sm_SelectionNames [4/17]

const char *const CCount_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "unknown",
    "val",
    "fuzzy-val",
    "range"
}

Definition at line 642 of file Count_.hpp.

Referenced by CCount_Base::C_Range::C_Start::SelectionName(), CCount_Base::C_Range::C_Stop::SelectionName(), CCount_Base::SelectionName(), CCount_Base::C_Range::C_Start::ThrowInvalidSelection(), CCount_Base::C_Range::C_Stop::ThrowInvalidSelection(), and CCount_Base::ThrowInvalidSelection().

sm_SelectionNames [5/17]

const char *const CDelins_Base::C_Inserted_seq_info::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "identifier",
    "raw-seq",
    "count",
    "subseq"
}

Definition at line 293 of file Delins_.hpp.

sm_SelectionNames [6/17]

const char *const CFrameshift_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "aasite",
    "stopcodon"
}

Definition at line 196 of file Frameshift_.hpp.

Referenced by CFrameshift_Base::SelectionName(), and CFrameshift_Base::ThrowInvalidSelection().

sm_SelectionNames [7/17]

const char *const CInsertion_Base::C_Seqinfo::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "identifier",
    "raw-seq",
    "count",
    "subseq"
}

Definition at line 293 of file Insertion_.hpp.

sm_SelectionNames [8/17]

const char *const CNtIntLimit_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "site",
    "range"
}

Definition at line 213 of file NtIntLimit_.hpp.

Referenced by CNtIntLimit_Base::SelectionName(), and CNtIntLimit_Base::ThrowInvalidSelection().

sm_SelectionNames [9/17]

const char *const CNtLocation_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "site",
    "range",
    "int"
}

Definition at line 242 of file NtLocation_.hpp.

Referenced by CNtLocation_Base::SelectionName(), and CNtLocation_Base::ThrowInvalidSelection().

sm_SelectionNames [10/17]

const char *const CNtSite_Base::C_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "val",
    "unknown"
}

Definition at line 215 of file NtSite_.hpp.

sm_SelectionNames [11/17]

const char *const CNtSite_Base::C_Offset::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "val",
    "plus-unknown",
    "minus-unknown"
}

Definition at line 363 of file NtSite_.hpp.

sm_SelectionNames [12/17]

const char *const CNtSite_Base::C_Utr::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "five-prime",
    "three-prime"
}

Definition at line 482 of file NtSite_.hpp.

sm_SelectionNames [13/17]

const char *const CProteinExtension_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "nterm-ext",
    "cterm-ext"
}

Definition at line 213 of file ProteinExtension_.hpp.

Referenced by CProteinExtension_Base::SelectionName(), and CProteinExtension_Base::ThrowInvalidSelection().

sm_SelectionNames [14/17]

const char *const CSeqInterval_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "aaint",
    "ntint"
}

Definition at line 213 of file SeqInterval_.hpp.

Referenced by CSeqInterval_Base::SelectionName(), and CSeqInterval_Base::ThrowInvalidSelection().

sm_SelectionNames [15/17]

const char *const CSeqLocation_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "aaloc",
    "ntloc"
}

Definition at line 213 of file SeqLocation_.hpp.

Referenced by CSeqLocation_Base::SelectionName(), and CSeqLocation_Base::ThrowInvalidSelection().

sm_SelectionNames [16/17]

const char *const CSimpleVariant_Base::C_Type::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "na-identity",
    "na-sub",
    "prot-sub",
    "prot-silent",
    "del",
    "dup",
    "inv",
    "ins",
    "conv",
    "delins",
    "repeat",
    "prot-ext",
    "frameshift"
}

Definition at line 549 of file SimpleVariant_.hpp.

sm_SelectionNames [17/17]

const char *const CVariant_Base::sm_SelectionNames

staticprivate

Initial value:

= {
    "not set",
    "simple",
    "special"
}

Definition at line 217 of file Variant_.hpp.

Referenced by CVariant_Base::SelectionName(), and CVariant_Base::ThrowInvalidSelection().