utilities.cpp File Reference

#include <ncbi_pch.hpp>
#include <objects/biblio/Auth_list.hpp>
#include <objects/biblio/Author.hpp>
#include <objects/biblio/Cit_art.hpp>
#include <objects/pub/Pub_equiv.hpp>
#include <objects/pub/Pub_set.hpp>
#include <objects/general/Name_std.hpp>
#include <objects/general/Person_id.hpp>
#include <gui/objutils/macro_fn_pubfields.hpp>
#include <objects/misc/sequence_macros.hpp>
#include <gui/widgets/edit/utilities.hpp>
#include <misc/xmlwrapp/document.hpp>

Include dependency graph for utilities.cpp:

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Functions
	USING_SCOPE (objects)
void	ReplaceInPlaceWholeWordNoCase (string &rna_name, const string &search, const string &replace)
string	GetAdjustedRnaName (const string &orig_rna_name)
CRef< CPubdesc >	GetPubdescFromEntrezById (TEntrezId id)
string	GetAuthorsString (const CAuth_list &auth_list)
static string	s_GetAuthorsString (const CPubdesc &pd)
string	GetPubdescLabel (const CPubdesc &pd)
void	GetPubdescLabels (const CPubdesc &pd, vector< TEntrezId > &pmids, vector< TEntrezId > &muids, vector< int > &serials, vector< string > &published_labels, vector< string > &unpublished_labels)
string	GetDocSumLabel (const CPubdesc &pd)
string	GetStringFromTitle (const objects::CTitle::C_E &title)
void	UpdateTitle (objects::CTitle::C_E &title, const string &val)

Function Documentation

GetAdjustedRnaName()

string GetAdjustedRnaName

(

const string &

orig_rna_name

)

Definition at line 70 of file utilities.cpp.

References ReplaceInPlaceWholeWordNoCase().

Referenced by CBulkRNAAddPanel::x_GetRnaName(), CAlignRNAAddPanel::x_GetRnaName(), and x_SetNameFromName().

GetAuthorsString()

string GetAuthorsString

(

const CAuth_list &

auth_list

)

Definition at line 93 of file utilities.cpp.

References CAuth_list_Base::C_Names::GetMl(), CAuth_list_Base::GetNames(), CAuth_list_Base::C_Names::GetStd(), CAuth_list_Base::C_Names::GetStr(), CAuth_list_Base::C_Names::IsMl(), CAuth_list_Base::IsSetNames(), CAuth_list_Base::C_Names::IsStd(), CAuth_list_Base::C_Names::IsStr(), ITERATE, and label.

Referenced by s_GetAuthorsString().

GetDocSumLabel()

string GetDocSumLabel

(

const CPubdesc &

pd

)

Definition at line 225 of file utilities.cpp.

References CPub_equiv_Base::Get(), CImprint_Base::GetDate(), CCit_art_Base::GetFrom(), CCit_art_Base::C_From::GetJournal(), CImprint_Base::GetPages(), CPubdesc_Base::GetPub(), CDate_Base::GetStd(), CTitle::GetTitle(), CCit_art_Base::GetTitle(), CImprint_Base::GetVolume(), CDate_std_Base::GetYear(), NStr::IsBlank(), CCit_art_Base::C_From::IsJournal(), CImprint_Base::IsSetDate(), CCit_art_Base::IsSetFrom(), CImprint_Base::IsSetPages(), CPubdesc_Base::IsSetPub(), CCit_art_Base::IsSetTitle(), CImprint_Base::IsSetVolume(), CDate_std_Base::IsSetYear(), CDate_Base::IsStd(), ITERATE, journal(), NStr::NumericToString(), s_GetAuthorsString(), and rapidjson::source.

GetPubdescFromEntrezById()

CRef<CPubdesc> GetPubdescFromEntrezById

(

TEntrezId

id

)

Definition at line 78 of file utilities.cpp.

References CAliasBase< TPrim >::Set(), and CPub_Base::SetPmid().

Referenced by CGlobalPubmedIdLookup::apply(), CRemarksAndSerialNumberPanel::OnButtonClick(), CPublicationTypePanel::OnDoiLookup(), CPublishedRefPanel::OnLookupClick(), and CRelaxedLookupDlg::SendQuery().

GetPubdescLabel()

string GetPubdescLabel

(

const CPubdesc &

pd

)

Definition at line 158 of file utilities.cpp.

References GetPubdescLabels(), and label.

GetPubdescLabels()

void GetPubdescLabels	(	const CPubdesc &	pd,
		vector< TEntrezId > &	pmids,
		vector< TEntrezId > &	muids,
		vector< int > &	serials,
		vector< string > &	published_labels,
		vector< string > &	unpublished_labels
	)

Definition at line 177 of file utilities.cpp.

References CPub::eContent, NStr::eNocase, FOR_EACH_PUB_ON_PUBDESC, NStr::IsBlank(), label, s_GetAuthorsString(), and NStr::StartsWith().

Referenced by GetPubdescLabel().

GetStringFromTitle()

string GetStringFromTitle

(

const objects::CTitle::C_E &

title

)

Definition at line 279 of file utilities.cpp.

References kEmptyStr.

Referenced by CPublishedRefPanel::TransferDataToWindow().

ReplaceInPlaceWholeWordNoCase()

void ReplaceInPlaceWholeWordNoCase	(	string &	rna_name,
		const string &	search,
		const string &	replace
	)

Definition at line 49 of file utilities.cpp.

References NStr::FindNoCase(), isalpha(), and isspace().

Referenced by GetAdjustedRnaName().

s_GetAuthorsString()

static string s_GetAuthorsString ( const CPubdesc &  pd )

static

Definition at line 144 of file utilities.cpp.

References FOR_EACH_PUB_ON_PUBDESC, and GetAuthorsString().

Referenced by GetDocSumLabel(), and GetPubdescLabels().

UpdateTitle()

void UpdateTitle	(	objects::CTitle::C_E &	title,
		const string &	val
	)

Definition at line 322 of file utilities.cpp.

References NStr::IsBlank(), and val.

Referenced by CPublishedRefPanel::TransferDataFromWindow().

USING_SCOPE()

USING_SCOPE

(

objects

)