#include <objmgr/object_manager.hpp>#include <objtools/blast/seqdb_reader/seqdb.hpp>#include <algo/blast/blastinput/blast_scope_src.hpp>#include <algo/blast/blastinput/blast_input.hpp>#include <algo/blast/blastinput/blast_fasta_input.hpp>#include <algo/blast/api/uniform_search.hpp>#include <algo/blast/api/blast_prot_options.hpp>#include <algo/blast/api/local_blast.hpp>#include <algo/blast/api/objmgr_query_data.hpp>#include <algo/blast/format/blast_format.hpp>#include <math.h>#include <objtools/readers/fasta.hpp>#include <util/sequtil/sequtil_convert.hpp>#include <algo/blast/proteinkmer/blastkmer.hpp>#include <algo/blast/proteinkmer/blastkmerresults.hpp>#include <algo/blast/proteinkmer/blastkmeroptions.hpp>#include <algo/blast/proteinkmer/kblastapi.hpp>
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Classes | |
| class | CBlastKmerThread |
| Threading class for BlastKmer searches. More... | |
Functions | |
| USING_SCOPE (objects) | |
| USING_SCOPE (blast) | |
Variables | |
| USING_NCBI_SCOPE | |
Function Documentation
◆ USING_SCOPE() [1/2]
| USING_SCOPE | ( | blast | ) |
◆ USING_SCOPE() [2/2]
| USING_SCOPE | ( | objects | ) |
Variable Documentation
◆ USING_NCBI_SCOPE
| USING_NCBI_SCOPE |
Definition at line 54 of file kblastthr.hpp.
