macro_panel_args.hpp

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#ifndef GUI_OBJUTILS___MACRO_PANEL_ARGS__HPP
#define GUI_OBJUTILS___MACRO_PANEL_ARGS__HPP
/*  $Id: macro_panel_args.hpp 47274 2022-12-06 16:17:02Z asztalos $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors: Andrea Asztalos
 *
 * File Description: Control names defined in the panels from the macro editor
 *
 */
 
#include <corelib/ncbistd.hpp>
#include <gui/objutils/macro_edit_fn_base.hpp>
#include <gui/widgets/edit/macro_argument.hpp>
#include <gui/gui_export.h>
 
 
BEGIN_NCBI_SCOPE
 
namespace NMacroArgs
{
    const string kBsrcTextFrom = "text_qualifier_from";
    const string kBsrcTaxFrom = "taxonomy_from";
    const string kBsrcTextTo = "text_qualifier_to";
    const string kBsrcTaxTo = "taxonomy_to";
 
    const string kField = "field";
    const string kNewValue = "new_value";
    const string kExistingText = "existing_text";
    const string kDelimiter = "delimiter";
 
    const string kTableEnable = "enable_table";
    const string kTableName = "table";
    const string kTableCol = "table_column";
    const string kOpenFile = "file_open_btn";
    const string kTableLabel = "filename_text";
    const string kColLabel = "column_text";
    const string kTableDel = "table delimiter";
    const string kCaseSensMatch = "case sens match";
 
    const TArgumentsVector& GetSetArgs();
 
    const string kFind = "find_text";
    const string kRepl = "repl_text";
    const string kLocation = "location";
    const string kCaseSens = "case_sensitive";
    const string kCopy = "copy_btn";
    const string kIsRegex = "is_regex";
 
    const TArgumentsVector& GetEditArgs();
 
    const string kFromField = "from_field";
    const string kToField = "to_field";
 
    const TArgumentsVector& GetSwapArgs();
 
    const TArgumentsVector& GetCopyArgs();
 
    const string kLeaveOrig = "leave_original";
    const string kNoChange = "no_change";
    const string kToUpper = "to_upper";
    const string kCapNochange = "fcap_nochange";
    const string kCapAtSpaces = "cap_atspaces";
    const string kToLower = "to_lower";
    const string kFCapLower = "fcap_lower";
    const string kFlowerNochange = "flower_nochange";
    const string kCapAtSpacesPunct = "cap_atspaces_punct";
 
    const TArgumentsVector& GetConvertArgs();
 
    const string kTextLeft = "text_left";
    const string kDelLeft = "delimiter_left";
    const string kDigitsLeft = "digits_left";
    const string kLetterLeft = "letters_left";
    const string kRmvLeft = "rmv_left";
    const string kTextRight = "text_right";
    const string kDelRight = "delimiter_right";
    const string kDigitsRight = "digits_right";
    const string kLetterRight = "letters_right";
    const string kRmvRight = "rmv_right";
 
    const TArgumentsVector& GetDelimiterArgs();
 
    const string kJustAfter = "just_after";
    const string kStartAt = "starting_at";
    const string kUpTo = "up_to";
    const string kInclude = "including";
    const string kRmvParse = "rmv_from_parsed";
    const string kCaseInsensParse = "case_insensitive_parse";
    const string kWholeWordParse = "whole_word_parse";
 
    const TArgumentsVector& GetParseArgs();
 
    const string kBefore = "before_check";
    const string kAfter = "after_check";
    const string kCaseInsensRmv = "case_insensitive_rmv";
    const string kWholeWordRmv = "whole_word_rmv";
 
    const TArgumentsVector& GetRmvOutsideArgs();
 
    const string kFeatType = "feature_field";
    const string kFeatQual = "qualifier_field";
    const string kUpdatemRNA = "update_mrna";
    const string kRNAType = "rna_type";
    const string kncRNAClass = "ncRNA_class";
    const string kStrCommField = "strcomm_field";
    const string kMoveToNote = "move_to_note";
    const string kProteinName = "protein_name";
    const string kIsProtein = "is_protein";
 
    const TArgumentsVector& GetOptionalArgs();
 
    const string kBsrcText = "text_qualifier";
    const string kBsrcTax = "taxonomy";
    const string kBsrcLoc = "bsrclocation";
    const string kBsrcOrigin = "origin";
    const TArgumentsVector& GetBsrcArgs();
 
    const TArgumentsVector& GetDualBsrcArgs();
 
    const string kMolFrom = "mol_from";
    const string kMolTo = "mol_to";
    const string kTechFrom = "tech_from";
    const string kTechTo = "tech_to";
    const string kComplFrom = "compl_from";
    const string kComplTo = "compl_to";
    const string kClassFrom = "class_from";
    const string kClassTo = "class_to";
    const string kTopFrom = "topology_from";
    const string kTopTo = "topology_to";
    const string kStrandFrom = "strand_from";
    const string kStrandTo = "strand_to";
    const string kApplySeq = "apply_seq";
 
    const TArgumentsVector& GetEditMolinfoArgs();
 
    const string kInconsTaxa = "inconsistent_taxa";
 
    const TArgumentsVector& GetConvertSetArgs();
 
    const string kFromFeat = "from_feature";
    const string kToFeat = "to_feature";
    const string kConvText = "conversion_descr";
    const string kLeaveFeat = "leave_original";
    const string kRemmRNA = "rem_mrna";
    const string kRemGene = "rem_gene";
    const string kRemTranscriptid = "rem_transcriptID";
    const string kSelText = "selection_text";
    const string kChoices = "choices";
    const string kCreateOnProtein = "create_on_protein";
 
    const TArgumentsVector& GetConvertFeatArgs();
 
    const string kCapChange = "cap_change";
    const string kPunctonly = "punct_only";
 
    const TArgumentsVector& GetFixPubCapsArgs();
 
    const string kExceptionType = "exception_type";
    const string kWhereFeatProduct = "where_feature_product";
    const string kMoveExplanation = "move_explanation";
 
    const TArgumentsVector& GetSetExceptionArgs();
 
    const string kSuppressingType = "suppressing_type";
    const string kNecessaryType = "necessary_type";
 
    const TArgumentsVector& GetRemoveGeneXrefArgs();
 
    const string kCheckPartials = "check_partials";
    const string kRemoveProteins = "remove_proteins";
 
    const TArgumentsVector& GetRmvDuplFeaturesArgs();
 
    const string kDelImproper = "del_improper";
    const string kDelUnrecog = "del_unrecog";
    const string kDelMultRepl = "del_mult_repl";
 
    const TArgumentsVector& GetUpdateRpldECNumbersArgs();
 
    const string kObeyStopCodon = "obey_stop_codon";
 
    const string kRmvOverlapGene = "rmv_overlapping_gene";
 
    const string kRmvBlank = "remove_blank";
 
    const TArgumentsVector& GetApplyTableArgs();
 
    const string kGapSizeCnv = "convert_gap_size";
 
    const string kAllDbxref = "all_dbxref";
    const string kIllegalDbxref = "illegal_dbxref";
 
    const TArgumentsVector& GetRmvDbxrefArgs();
 
    const string kColDel = "col_del";
    const string kMergeDel = "merge_del";
    const string kSplitFirst = "split_first";
    const string kConvertMulti = "convert_multi";
    const string kMergeFirst = "merge_first";
    const string kMultipleSpsOnly = "multiple_spaces_only";
 
    // used when opening a macro in the editor
    const string kAffiliation = "affiliation";
 
    const string kLast = "last";
    const string kFirst = "first";
    const string kMiddle = "middle"; // middle initials
    const string kSuffix = "suffix";
 
    const string kRetranslate = "retranslate";
    const string kAdjustGene = "adjustgene";
 
    const TArgumentsVector& GetExtendFeatToSeqEndArgs();
 
    const string kPartialOption = "partial_option";
    const string kExtend = "extend";
 
    const TArgumentsVector& GetSetPartialArgs();
    const TArgumentsVector& GetClearPartialArgs();
 
    const TArgumentsVector& GetConvertLocStrandArgs();
 
    const string kLocType = "loc_type";
 
    const TArgumentsVector& GetConvertLocTypeArgs();
 
    const string kTestName = "test_name";
 
    const TArgumentsVector& GetDiscrReportArgs();
 
    const string kSourceField = "source_field";
    const string kListFeatRule = "list_feat_rule";
    const string kMiscFeatCheck = "misc_feat_check";
    const string kMiscFeatRule = "misc_feat_rule";
    const string kSelectAll = "select_all";
    const string kAutodefCompl = "autodef_complete";
 
    const TArgumentsVector& GetAutodefArgs();
 
    
    const string kMinUnknown = "min_unknown";
    const string kMaxUnknown = "max_unknown";
    const string kMinKnown = "min_known";
    const string kMaxKnown = "max_known";
    const string kAdjustCDS = "adjust_cds";
    const string kKeepGapLength = "keep_gap_length";
    const string kGapType = "gap_type";
    const string kLinkage = "linkage";
    const string kLinkEvidence = "linkage_evidence";
 
    const vector<string>& GetAddAssemblyGapsNArgs();
 
    const string kProteinDescr = "protein_descr";
    const string kCodonStart = "codon_start";
    const string kAddmRNA = "add_mrna";
 
    const TArgumentsVector& GetApplyCDSArgs();
 
    const string kPartial5 = "partial5";
    const string kPartial3 = "partial3";
    const string kStrand = "loc_strand";
    const string kWholeSeq = "use_whole_seq";
    const string kInterval = "use_coord";
    const string kFromCoord = "from_coord";
    const string kToCoord = "to_coord";
 
    const string kComment = "comment";
    const string kGeneLocus = "gene_symbol";
    const string kGeneDescr = "gene_descr";
    const string kAddRedundant = "add_redundant";
    const string kFeatureType = "feature_type";
 
    const string kAddFeatQual1 = "qualifier1";
    const string kAddFeatVal1 = "qual_value1";
    const string kAddFeatQual2 = "qualifier2";
    const string kAddFeatVal2 = "qual_value2";
    const string kAddFeatQual3 = "qualifier3";
    const string kAddFeatVal3 = "qual_value3";
    const string kAddFeatQual4 = "qualifier4";
    const string kAddFeatVal4 = "qual_value4";
 
    
    const TArgumentsVector& GetApplyOtherFeatureArgs();
 
    const string kRnaName = "rna_name";
    const string kmiscRNA_comment1 = "miscRNA_comment1";
    const string kmiscRNA_comment2 = "miscRNA_comment2";
    const string kGeneSymbolStatic = "gene_symbol_static";
    const string kGeneDescrStatic = "gene_descr_static";
  
    const TArgumentsVector& GetApplyRNAArgs();
 
    const string kApplyMultiple = "apply_multiple";
 
    const TArgumentsVector& GetApplyPmidArgs();
 
    const string kGlobalDoi = "global_doi";
    const string kSameDoi = "same_doi";
 
    const TArgumentsVector& GetDOILookupArgs();
 
    const string kUnverOrg = "unver_org";
    const string kUnverFeats = "unver_feats";
    const string kUnverMisassembled = "unver_misassm";
    const string kUnverContamination = "unver_contm";
 
    const TArgumentsVector& GetUnverifiedArgs();
 
    // variables used in the location constraint panel
    const string kConstr_Strand = "constr_strand";
    const string kConstr_LocType = "constr_loctype";
    const string kConstr_Distance = "constr_dist";
 
    // variables used in the string constraint panel
    const string kConstr_Match = "match_text";
    const string kConstr_StrCaseSens = "constr_casesens";
    const string kConstr_IgnoreSpace = "ignore_space";
    const string kConstr_IgnorePunct = "ignore_punct";
    const string kConstr_WholeWord = "whole_word";
    const string kConstr_IgnoreWeasel = "ignore_weasel";
    const string kConstr_SynFile = "synonym_file";
    const string kConstr_SynMatch = "syn_match";
    const string kConstr_SynCaseSens = "syn_casesens";
    const string kConstr_SynWholeWord = "syn_wholeword";
 
    // variables used in the sequence_and_features constraint panel
    const string kConstr_FeatType = "constr_feattype";
    const string kConstr_FeatCount = "constr_featcount";
 
}
 
END_NCBI_SCOPE
 
#endif  // GUI_OBJUTILS___MACRO_PANEL_ARGS__HPP