mafft_tool_panel.cpp

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/*  $Id: mafft_tool_panel.cpp 43794 2019-08-30 19:15:21Z katargir $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Authors: Vladislav Evgeniev
 *
 * File Description:
 *
 */
 
#include <ncbi_pch.hpp>
 
#include <gui/widgets/object_list/object_list_widget_sel.hpp>
#include <gui/widgets/wx/exe_file_validator.hpp>
 
#include "mafft_tool_panel.hpp"
 
#include <wx/sizer.h>
#include <wx/stattext.h>
#include <wx/choice.h>
#include <wx/bmpbuttn.h>
#include <wx/checkbox.h>
#include <wx/valgen.h>
#include <wx/valtext.h>
#include <wx/msgdlg.h>
#include <wx/filedlg.h>
#include <wx/filename.h>
#include <wx/artprov.h>
#include <wx/bitmap.h>
#include <wx/icon.h>
 
////@begin includes
////@end includes
 
BEGIN_NCBI_SCOPE
USING_SCOPE(ncbi::objects);
 
IMPLEMENT_DYNAMIC_CLASS( CMafftToolPanel, CAlgoToolManagerParamsPanel )
 
BEGIN_EVENT_TABLE( CMafftToolPanel, CAlgoToolManagerParamsPanel )
 
////@begin CMafftToolPanel event table entries
    EVT_BUTTON( ID_BITMAPBUTTON1, CMafftToolPanel::OnMafftPathClick )
////@end CMafftToolPanel event table entries
 
END_EVENT_TABLE()
 
CMafftToolPanel::CMafftToolPanel()
{
    Init();
}
 
CMafftToolPanel::CMafftToolPanel( wxWindow* parent, wxWindowID id, const wxPoint& pos, const wxSize& size, long style, bool visible )
{
    Init();
    Create(parent, id, pos, size, style);
}
 
bool CMafftToolPanel::Create(wxWindow* parent, wxWindowID id, const wxPoint& pos, const wxSize& size, long style, bool visible)
{
////@begin CMafftToolPanel creation
    SetExtraStyle(wxWS_EX_VALIDATE_RECURSIVELY);
    CAlgoToolManagerParamsPanel::Create( parent, id, pos, size, style );
 
    CreateControls();
    if (GetSizer())
    {
        GetSizer()->SetSizeHints(this);
    }
    Centre();
////@end CMafftToolPanel creation
    if (!visible) {
        Hide();
    }
    return true;
}
 
CMafftToolPanel::~CMafftToolPanel()
{
////@begin CMafftToolPanel destruction
////@end CMafftToolPanel destruction
}
 
void CMafftToolPanel::Init()
{
////@begin CMafftToolPanel member initialisation
    m_LocationSel = NULL;
////@end CMafftToolPanel member initialisation
}
 
void CMafftToolPanel::CreateControls()
{    
////@begin CMafftToolPanel content construction
    // Generated by DialogBlocks, 30/08/2019 14:53:34 (unregistered)
 
    CMafftToolPanel* itemCAlgoToolManagerParamsPanel1 = this;
 
    wxBoxSizer* itemBoxSizer2 = new wxBoxSizer(wxVERTICAL);
    itemCAlgoToolManagerParamsPanel1->SetSizer(itemBoxSizer2);
 
    m_LocationSel = new CObjectListWidgetSel( itemCAlgoToolManagerParamsPanel1, ID_PANEL, wxDefaultPosition, wxDefaultSize, wxNO_BORDER|wxTAB_TRAVERSAL );
    itemBoxSizer2->Add(m_LocationSel, 1, wxGROW|wxALL, 0);
 
    wxCheckBox* itemCheckBox4 = new wxCheckBox( itemCAlgoToolManagerParamsPanel1, ID_CHECKBOX1, _("Automatically select an appropriate strategy from L-INS-i, FFT-NS-i and FFT-NS-2 (default is FFT-NS-2). "), wxDefaultPosition, wxDefaultSize, 0 );
    itemCheckBox4->SetValue(false);
    itemBoxSizer2->Add(itemCheckBox4, 0, wxGROW|wxALL, 5);
 
    wxCheckBox* itemCheckBox5 = new wxCheckBox( itemCAlgoToolManagerParamsPanel1, ID_CHECKBOX, _("Quiet mode (prints nothing to the console)"), wxDefaultPosition, wxDefaultSize, 0 );
    itemCheckBox5->SetValue(true);
    itemBoxSizer2->Add(itemCheckBox5, 0, wxGROW|wxALL, 5);
 
    wxBoxSizer* itemBoxSizer6 = new wxBoxSizer(wxHORIZONTAL);
    itemBoxSizer2->Add(itemBoxSizer6, 0, wxGROW|wxALL, 0);
 
    wxStaticText* itemStaticText7 = new wxStaticText( itemCAlgoToolManagerParamsPanel1, wxID_STATIC, _("Command line options"), wxDefaultPosition, wxDefaultSize, 0 );
    itemBoxSizer6->Add(itemStaticText7, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);
 
    wxTextCtrl* itemTextCtrl8 = new wxTextCtrl( itemCAlgoToolManagerParamsPanel1, ID_TEXTCTRL11, wxEmptyString, wxDefaultPosition, wxDefaultSize, 0 );
    itemBoxSizer6->Add(itemTextCtrl8, 1, wxALIGN_CENTER_VERTICAL|wxALL, 5);
 
    wxBoxSizer* itemBoxSizer9 = new wxBoxSizer(wxHORIZONTAL);
    itemBoxSizer2->Add(itemBoxSizer9, 0, wxGROW|wxALL, 0);
 
    wxStaticText* itemStaticText10 = new wxStaticText( itemCAlgoToolManagerParamsPanel1, wxID_STATIC, _("Path to executable"), wxDefaultPosition, wxDefaultSize, 0 );
    itemBoxSizer9->Add(itemStaticText10, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);
 
    wxTextCtrl* itemTextCtrl11 = new wxTextCtrl( itemCAlgoToolManagerParamsPanel1, ID_TEXTCTRL12, wxEmptyString, wxDefaultPosition, wxDefaultSize, 0 );
    itemBoxSizer9->Add(itemTextCtrl11, 1, wxALIGN_CENTER_VERTICAL|wxALL, 5);
 
    wxBitmapButton* itemBitmapButton12 = new wxBitmapButton( itemCAlgoToolManagerParamsPanel1, ID_BITMAPBUTTON1, itemCAlgoToolManagerParamsPanel1->GetBitmapResource(wxT("menu::open")), wxDefaultPosition, wxDefaultSize, wxBU_AUTODRAW );
    itemBitmapButton12->SetHelpText(_("Select MAFFT executable"));
    if (CMafftToolPanel::ShowToolTips())
        itemBitmapButton12->SetToolTip(_("Select MAFFT executable"));
    itemBoxSizer9->Add(itemBitmapButton12, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);
 
    // Set validators
    itemCheckBox5->SetValidator( wxGenericValidator(& GetData().m_QuietFlag) );
    itemTextCtrl8->SetValidator( wxTextValidator(wxFILTER_NONE, & GetData().m_CommandLine) );
    itemTextCtrl11->SetValidator( CExeFileValidator(& GetData().m_MafftPath, wxT("MAFFT")) );
////@end CMafftToolPanel content construction
 
    m_LocationSel->SetTitle(wxT("Select Locations"));
    m_LocationSel->SetDoSelectAll(true);
    m_LocationSel->ShowNuclProtButtons();
    m_LocationSel->EnableGroups(false);
    m_LocationSel->SetDefaultSelection("Genomic Location (total range)");
}
 
bool CMafftToolPanel::ShowToolTips()
{
    return true;
}
wxBitmap CMafftToolPanel::GetBitmapResource( const wxString& name )
{
    return wxArtProvider::GetBitmap(name);
}
wxIcon CMafftToolPanel::GetIconResource( const wxString& name )
{
    // Icon retrieval
////@begin CMafftToolPanel icon retrieval
    wxUnusedVar(name);
    return wxNullIcon;
////@end CMafftToolPanel icon retrieval
}
 
bool CMafftToolPanel::TransferDataFromWindow()
{
    if (!CAlgoToolManagerParamsPanel::TransferDataFromWindow())
        return false;
 
    GetData().SetObjects() = m_LocationSel->GetSelection();
 
    return true;
}
 
static const char* kLocationSel = ".LocationSel";
 
void CMafftToolPanel::SetRegistryPath(const string& path)
{
    m_RegPath = path;
    m_LocationSel->SetRegistryPath(m_RegPath + kLocationSel);
}
 
void CMafftToolPanel::SaveSettings() const
{
    m_LocationSel->SaveSettings();
}
 
void CMafftToolPanel::LoadSettings()
{
    m_LocationSel->LoadSettings();
}
 
void CMafftToolPanel::OnMafftPathClick(wxCommandEvent& WXUNUSED(event))
{
    wxTextCtrl* textCtrl = dynamic_cast<wxTextCtrl*>(FindWindow(ID_TEXTCTRL12));
    _ASSERT(nullptr != textCtrl);
 
    wxString path = textCtrl->GetValue();
 
    wxFileDialog dlg(this, wxT("Select a file"), wxT(""), wxT(""), wxT("*"),
        wxFD_OPEN|wxFD_FILE_MUST_EXIST);
 
    dlg.SetPath(path);
 
    if (dlg.ShowModal() != wxID_OK)
        return;
 
    path = dlg.GetPath();
    textCtrl->SetValue(path);
}
 
void CMafftToolPanel::RestoreDefaults()
{
    GetData().Init();
    TransferDataToWindow();
}
 
void CMafftToolPanel::SetObjects(map<string, TConstScopedObjects>* objects)
{
    m_LocationSel->SetObjects(objects);
}
 
END_NCBI_SCOPE