NCBI C++ ToolKit
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matrix_freq_ratios.h File Reference

Interface to retrieve the frequency ratios for various scoring matrices. More...

#include <algo/blast/core/blast_encoding.h>
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Classes

struct  SFreqRatios
 Stores the frequency ratios along with their bit scale factor. More...
 

Typedefs

typedef struct SFreqRatios SFreqRatios
 Stores the frequency ratios along with their bit scale factor. More...
 

Functions

SFreqRatios_PSIMatrixFrequencyRatiosNew (const char *matrix_name)
 Retrive the matrix's frequency ratios. More...
 
SFreqRatios_PSIMatrixFrequencyRatiosFree (SFreqRatios *freq_ratios)
 Deallocate the frequency ratios structure. More...
 

Detailed Description

Interface to retrieve the frequency ratios for various scoring matrices.

See explanation in p 2996 of Nucleic Acids Research, 2001, Vol 29, No 14.

Definition in file matrix_freq_ratios.h.

Typedef Documentation

◆ SFreqRatios

typedef struct SFreqRatios SFreqRatios

Stores the frequency ratios along with their bit scale factor.

Function Documentation

◆ _PSIMatrixFrequencyRatiosFree()

SFreqRatios* _PSIMatrixFrequencyRatiosFree ( SFreqRatios freq_ratios)

◆ _PSIMatrixFrequencyRatiosNew()

SFreqRatios* _PSIMatrixFrequencyRatiosNew ( const char *  matrix_name)
Modified on Sat May 18 11:40:37 2024 by modify_doxy.py rev. 669887