seqsubmit_split Namespace Reference

Classes
class	CObjectHelper
class	CSeqSubSplitter
struct	SCompare
struct	SLongestFirstCompare
struct	SShortestFirstCompare
struct	SIdCompare
class	CSeqSubmitHelper
class	CSeqEntryHelper

Typedefs
typedef vector< CRef< CSeq_entry > >	TSeqEntryArray
typedef list< CRef< CSeq_entry > >	TSeqEntryList

Functions
static bool	MultipleAllowed (CSeqdesc::E_Choice choice)
static bool	NeedToInclude (const CSeqdesc &descr, const CSeq_descr &dst)
static bool	NeedToProcess (const CSeq_entry &entry, bool set_of_any_type_allowed)

Typedef Documentation

TSeqEntryArray

typedef vector<CRef<CSeq_entry> > seqsubmit_split::TSeqEntryArray

Definition at line 60 of file ssub_fork.cpp.

TSeqEntryList

typedef list<CRef<CSeq_entry> > seqsubmit_split::TSeqEntryList

Definition at line 61 of file ssub_fork.cpp.

Function Documentation

MultipleAllowed()

static bool seqsubmit_split::MultipleAllowed ( CSeqdesc::E_Choice  choice )

static

Definition at line 684 of file ssub_fork.cpp.

References CSeqdesc_Base::e_Comment, CSeqdesc_Base::e_Dbxref, CSeqdesc_Base::e_Het, CSeqdesc_Base::e_Maploc, CSeqdesc_Base::e_Modelev, CSeqdesc_Base::e_Name, CSeqdesc_Base::e_Num, CSeqdesc_Base::e_Pub, CSeqdesc_Base::e_Region, and CSeqdesc_Base::e_User.

Referenced by seqsubmit_split::CSeqSubSplitter::xMergeSeqDescr().

NeedToInclude()

static bool seqsubmit_split::NeedToInclude ( const CSeqdesc &  descr, const CSeq_descr &  dst  )

static

Definition at line 702 of file ssub_fork.cpp.

References CSeq_descr_Base::Get(), CSeq_descr_Base::IsSet(), and CSeqdesc_Base::Which().

Referenced by seqsubmit_split::CSeqSubSplitter::xMergeSeqDescr().

NeedToProcess()

static bool seqsubmit_split::NeedToProcess ( const CSeq_entry &  entry, bool  set_of_any_type_allowed  )

static

Definition at line 758 of file ssub_fork.cpp.

References CBioseq_set_Base::eClass_genbank, CBioseq_set_Base::eClass_pub_set, CBioseq_set_Base::GetClass(), CSeq_entry_Base::GetSet(), CSeq_entry_Base::IsSeq(), and CBioseq_set_Base::IsSetClass().

Referenced by seqsubmit_split::CSeqSubSplitter::xFlattenSeqEntry().